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mature miRNA: GGAATGTTGTCTGGCTCGAGG
species: Manihot esculenta
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|119018923|gb|DV456330.1|DV456330 CV02021A2B04.f1 CV02-normalized library Manihot esculenta cDNA clone CV02021A2B04.f1, mRNA s

GGAATGTTGTCTGGCTCGAGG
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TCTTACAACAGACCACGTTTC

EST sequence (targeted fragment marked with yellow):
GAAGTCTCCCCACGAGGGTCTCAACTTGAGAGATTGNNNGAAGTCACCTGCTCCTGCTGACATTTATGTTCTTGGGTTCCAGGAAATTGTACCCCTGAATGCAGGGAACGTACTTGGGGCAGAGGACAATGGCCCAGCTGTCAAGTGGCTTTCCTTAATTCGACAAGCACTTCACAGCAGCAAGAATGACCAAGAATTTTCTCACTATTACAAACATGTCACTGATGCTAAAGTTTCATCTTCACCACAACCTGATCAACAAGCTTGCATCAAACCTAGAGTCAGCTTCTCTGACCTGCTCTCATTAGAAGATGAGCTTGGGAATGAGGATTTTGAAAGATTACTAAATCTGAATTCAAATTTAAGCTCAGCTGAAGAAGGCTCTCCTAGTCCGACTTACATGTCTAGAGGCAGTCCAATGAGGCGGCATTACTGCCTAGCAGCTAGCAAGCAAATGGTTGGAATCTTCTTATGCGTGTGGGTTCGATCAGACCTCTACAAACATATTAGTAATTTGAAGGTCTCATGTGTTGGTCGTGGCATTATGGGTTACCTCGGCAACAAGGGCTCAGTTTCGATTAGTATTACTTTGCACCAGACAACATTCTGCTTTGTTTGCACACACTTGACTTCTGGGGAGAAAGAAGGCGACGAGGTCAGANNNAATTCAGATGTCACTGAAATATTAAAGAAAACCAGGTTTTTTCATTCATGTAGAGATCTTGGTCAACCTCCTCCACCTGAGAGTATATTAGATCACGA