| mature miRNA: GGAATGTTGTCTGGCTCGAGG species: Theobroma cacao database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|212317334|gb|CU530930.1|CU530930 CU530930 TEGPULI_KZ0AAI_K Theobroma cacao cDNA clone KZ0AAK12YD16FM1, mRNA sequence GGAATGTTGTCTGGCTCGAGG EST sequence (targeted fragment marked with yellow): GATTTGATGAAGCTTCAAATCTTAAGTTGGGCTCTTTGTCTTCCACTAAGGCCTCCAAAAAAAATAAAAATGCAATTTAATGTACTTGTTTCCAAGACAAACATGAATTATTAGTGCCAAGAGGGCGAGATGATAGAGCCTCCTGCAAATCCAACAACTACCACCAGCAACAAGATGTAGCAAAATCCTTAATTTATATGTAGGATAGGAATTAGGAAACTAGTCAGCTTACTATTATTCTTCCTTTTGATTTCCCCGAGAGACCTGTAACTAACTGTTAAACTAATCATGCTACTGGTGATCGATGAAATCCAAGAATAAAACCACTGTACTTCCATGTAAAAATATTAAAAGTGGAAGCAGTAATTAAGGGGAATGAAGCCTGGTCCAAGAGCACAAATTAAACAGGGAATAAGACTATCTTTCGATTGATCTTGAAAGCTAATCAGTTTTTAGGCTCGAAACAGATCAAAATAGATGGAGAGTTGGGTGCTCTTGAACCAGACAACATTCCCCTCAACAAGAAAAGCTTCCCACCTGGAAACTATCTTCCTTGATCTTCCTTCTTCACTTTTCCGTTATTCTTTCCTTCAATACAACAATTCTTTTGCGGGTTTCGTGTGATATATTGTTGATGACGATGAACATAATCATTTGATTTTACGAGAGAAAGTAAAAGCGGTGAAAGAGAGAGATTGAGGAAGAACATGGGGGTCCCGAGGTCGTGGTCATTTCTGGAACCCAGCTGTTGGGTTGGGTTCAGCCCTGTTCTTTTTCTCTAACTTTTGGAACTCTAAATAATAAGCAAATCCTGTAAAAAACTGCCCAATCCCCGCGTACTCTG | |||||||||