| mature miRNA: GGAATGTTGTTTGGCTCGAGG species: Glycine max database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|298169782|gb|HO021142.1|HO021142 ocpsga0_0162_G07.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN GGAATGTTGTTTGGCTCGAGG EST sequence (targeted fragment marked with yellow): GGGGGTGTTGGATTGGTTTCCATTCCCAATTCCCAATCGTGTTGGGTGGCCATGGATTCTCTACTGGCGAACTATGCCTCTTCAGATGAAGAAGAAGATCAACAGCCATCCCCACCAAAAACGACGACGTTTTCCTCCCTTCCTCAACCCAAACTTTCTCTGTTTCAATCCCTTCCTCAACCCAAATCTTCTCTGTTTCAATCCCTTCCTCCACCCAAACAACCTTCCACCGAAAGCTCTTCCCTCCCTAACCCTAACCCTAACCCTGACCCTAAACCCCAAATCGAAAAGACACAACCCAAACGCGTCGTGCAATTCAGGCCCCCAATCATCCCTCTCCCACACCCTTCACAACACGACGATGACGACGATGACGACGACGACGACGAAGAAGAAGAACGAAATAGAAGAAAGAAAAAGTTAGAGTCCTCCACGCAAACCTCATCGGTCAAGTCCTTCCTCGCCAGCATTCCAGCACCCAGGAACACCGCCACTCTCGGCGTTCAAGCAAGTTCCGGTTCAGGCCGGAAATCCATCCTCGAAACCGAAAT | |||||||||
gi|207840129|gb|GD811288.1|GD811288 454GmaGlobSeed553937 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GGAATGTTGTTTGGCTCGAGG EST sequence (targeted fragment marked with yellow): AAGCAGTGGTATTCTAACGCAGAGTGGCCATTACGGCCGGGGACCTCAATATTCATATTTCATATCATATAAGATAGCAAAGCCTATAACCCATGGAGTCAAACAACATGCCAGACTTGAATGGTGTCGCTAAGAAGACTAAAGGTCGACAAAAGATCGAAATGAAGAAGATGAGAAACGAGAGTAACCTTCGGGTGACATTCTCGAAGCGTCGCACTGGGGTTTTCAAGAAAGCTAGTGAGCTTGCAACCCT | |||||||||
gi|42723228|gb|CK769127.1|CK769127 Gm-r1030-3073 Gm-r1030 Glycine max cDNA clone Gm-r1030-3073 5', mRNA sequence GGAATGTTGTTTGGCTCGAGG EST sequence (targeted fragment marked with yellow): CCCACGCGTCCGATCATCTCTTTTTTCTCTCTTCTCTCTCACTCTGCTCAATTCAGGACACCTTTTTCCTTCTGATCCTTCTGGATATTGGTTTACTTGAGTGCATAATATCAGCCTGAAGCTGTACGTAATTCTGGATATCTAAGCCACACCGGAAAAATCAGCATGCGTTGGTTGGGTCTTTCTGTTGACGTGTTCCGCCAAGTTATACAGTTGAACTTGTATTGTAAAGTTATTCTGTAGATGATCATTTCCAAAAATCCTATATTTTTTTGCTTCTGGTCTCTTTGCTTAGCCACTGCCATGGATGCCAACCATTGTCTGATCGTTTCTTCTGATAAGTATAGAATTGGCTAAAAGATAGGAAGTGAAGGCAGATTCTGTTGTTTTGTATTTTCAGTATGTTCTTATCTCATATTGTTCTCTAGTTCTAGCTGATTCTGATTGTGTTTAGCTTGGGGTAACTTCATTGTGATATTCAATTGAGCGTTTATTCTCTGAGTGCAATAACATTAGATTGATTGAGTAGTGTGGTGAGAAACAAAAGAAGTTATGGTGTGCCAAGCAGCGAGCCAAACAAGATTCCGGGCATTAAAGCATGAGTATGGCATTGATGGTGCAGCAACAATTTATTGTTAGAGTGATAGCATGCTTTCA | |||||||||
gi|209705777|gb|BW661445.1|BW661445 BW661445 GMFL01 Glycine max cDNA clone GMFL01-18-O05 3', mRNA sequence GGAATGTTGTTTGGCTCGAGG EST sequence (targeted fragment marked with yellow): AAAATACCAGAATGATCCTTTGCTAATGCGGCTTATATCTAAGCATTTGTACTTGGAGAGGATTTTTGATGATTCAACCTCTAATAATCCTACATTAAGATGGAGATACCGGAATTTCTTTAGCGATAATGCAGTCAATGGTCATAGGACACATGATCGTGAATCTAATGATAAATCCCAAGGCAGGTCTGAAAATGTCACCGACAGCAAAAGAACAAATCTTAAGACCAAGCGTACTTTTAAAAACGCGAGTCCTGATATTATGTCGGAGGGTGACCCTCTTGATTGTCTTTTTGGTTATGCTCCTCCGGTGGAAGAGATCCATCATTCAAATTTCCCAAATAAACCATCAGGAATACATAATCGGGCTCGTAGAAAATCTCACCGTAGGCGTCGGATGCATAATCATGAGGACCTTTCAAACTCTGAGTCTGCAGCAGCTGTTTGACTATCATTTAACATTTGCAGACGTTGATGTTAGGATTATGCAAATTGTGGTTTTCTTAATAACGTAGGATTATGTAAATTGTGGTTTTTTTAATAACGTTCTGATCAATTTCCTTCTTGTCAAACAACATTTCAGAAAAGAACAGTGTTATTATTATGATAAGTACCATTTAATATGCC | |||||||||
gi|193381350|gb|FK345625.1|FK345625 454GmaGlobSeed80257 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA s GGAATGTTGTTTGGCTCGAGG EST sequence (targeted fragment marked with yellow): AANATTTGCAGACGTTGATGTTAGGATTATGCAAATTGTGGTTTTCTTAATAACGTAGGATTATGTAAATTGTGGTTTTTTTAATAACGTTCTGATCAACTTCCTTCTTGTCAAACAACATTTCAGAAAAGAACAGTGTTATTATTATGATAAGTACCATTTAATATGCCACATTATTATGCGTCTGAT | |||||||||
gi|213591724|gb|DB969824.1|DB969824 DB969824 full-length enriched soybean cDNA library, mixture of seedling, young plant, adult GGAATGTTGTTTGGCTCGAGG EST sequence (targeted fragment marked with yellow): GACTATTTCATTTCACACACTCTCGCGCTCCAGCCATGGCCACTCGCCGCCGCGGCGGCCACGATGCCGCCACCGTCCGTCCCCGTCCCCTCTCCGCCTCTCGCCGCTTCCCTTCTCCTTCTCTTTCTCTCCAGAAAGAAAACACCAACCCTCGCCGCTCCAATCCCAATCCCAACCACAAAACCCTCCCTCGCGGCCGCAGCTCCAGCCCCTCCCTCGACCGCCCCACCGCCCATAAGCCCACCAAGCCCACCACCACCGCCCCAAAGCCCAAACCTTCCACCTCCAGGTCAAGCCTCGAACTTAACAACAATCCCCCCAACGTAACCACCACCAACGACACCAAGTACTCCAGCAGGCTTCACGAGAAGCTCGCGTTTCTCGAAGGCAAAGTAAAGCGGATAGCTTCCGACATAAAGAAGACTAAAGAGATGC | |||||||||
gi|192298618|gb|FG988544.1|FG988544 GLLCI91TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence GGAATGTTGTTTGGCTCGAGG EST sequence (targeted fragment marked with yellow): GGGATTCCCAATTCCCAATTGTGTTGTGGGCATGGATTCTCTACTGGCGAACTATGCCTCTTCAGGCGAAGAAGAAGATCAACAACAACCATCTCCACCCAAAACGACTTCGTTTTCCTCTCTTCCTCAGCCCAAATCTTCTCTCTTTCAATCCCTTCCTCAACCCAAATCCTCTCCTTTTTCTTCTCTATTTCAATCTCTTCCTCCACCCAAACAACCTTCCAGCGAAAGCGCTTCACTCCCTAACCCTAACCCTAACCCTAACCCTAAACCCCAAATCGAAGAACCACGGCCCAAACGCGTCGTGCAATTCAGGCCCCCAATCATCCCTCTCCCAAACCCTACCCAACTCGACGATGACGACGACGACGAAGAAGAAGAGCGAAACAGAAGAAAGAACAAGTTAGAGTCCTCCACGCAAACCTCATCGGTCAAATCCTTCCTCGCCAGCATTCCGGCTCCAAGGAACACCGCCACTCTCGGCGTTCAAGCAAGTTCCGGTTCAGGCCGGAGATCCATCCTCGAAACCGAATCGCCGGCACCGGCATCAAATTCCGGTGGTTCCAACAATTTTCCCGTTGATCAAAGTACAGGGGATTATGAAAATTATGAGAATTACCAATATGCCACCGACCAGTATGCTAATTATTATGGCAATTATGGTTCGGGTGCCGAGCCAGGGAGTTCGGGTACCGAGTCAGAGGCTGGGGTTGCTGCTTATGGAACTGAACAGTATGGGAATTATGGTGATGCCTATGCTGCCTATGGGGATTATGGACAGTATGGGAATAATTGGGGGTGACGTGTCAGCGGCG | |||||||||
gi|193699189|gb|FK637614.1|FK637614 454GmaGlobSeed372246 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GGAATGTTGTTTGGCTCGAGG EST sequence (targeted fragment marked with yellow): CTTTTGCCATGTCTAACTATTGGTAAGTAGTATTGTCTTCCCCTTGTACTTGTTGGTAATCATATACCATGAGTTTTTCATCTTTGGAATAATAATATGCCTTGAGCTCAACCACATTCTCATGCTTAAGACTTCCTACAATCTCCATGTGCTGCTCAAAATCCTTCTTTCCAACGGCTACCTCCTTCAGCCTCTTCACAACAACCGTGGTTGCATCCTCAAGTATTGCCTTGTAGGCAGTTCCAAACGTTCCCTTTCCC | |||||||||
gi|208148776|gb|GD944988.1|GD944988 454GmaGlobSeed687637 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA GGAATGTTGTTTGGCTCGAGG EST sequence (targeted fragment marked with yellow): TTACGGCCGGGGACATCAGTATTCATATTTCATATCATATAAGATAGCAAAGCCTATAACCCATGGAGTCAAACAACATGCCAGACTTGAACGGTGTCACTAAGAAGACTAAAGGTCGACAAAAGGTCCACACACACCTCCACTACTTGTCCAACCAAATTGCTATTGAGAAGAAGCGCTCAAAGGATTTAAATCATTTAGCGAAGGTTGCAGAGGATCAGTT | |||||||||