miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: GGAGAAAAAATCATTGTTGGG
species: Nicotiana tabacum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|224697945|gb|FG624523.1|FG624523 TOBESTR038C03 TOBEST cDNA library 1 Nicotiana tabacum cDNA 5', mRNA sequence

GGAGAAAAAATCATTGTTGGG
|||.|||||||| .| |||.|
CCTTTTTTTTAGAGAAAACTC

EST sequence (targeted fragment marked with yellow):
CACAGCTTCAGTGGATAATGTATTGGACTTTTCACAAGGTTACTCTGCAACTCATTTTCAGAGGAGATCTGCATATGCATATCAGGAGCAATATGATTTTTTCCAATCATCTCTGTTACCTGGAAACCAATTGCAAGAAAACCAGTGGTTTGAAGGCAAAAGGTGGGGATATTAGCAGCTATCAGTTCTAGCAAATGTTGATGATGTCTGCAGCTAAATGAATGTTTAGAAAGAGGAAAGGAATTGGAGCTCAAAAGAGATTTTTTTTCCTCTTCTTTTTCAATATTTTTTTTTTAATTTTGCTGTCAATGCAGTGGGAAACAACTTGAAATAAGAAGTTGGAATTCCTTTTCCTCTATCTTAGAATTAAGTTTGTTGCAATGAATAGTGAAATATTAGATTTTGACCTAAAAAAAAAAAAAAAAAAG



gi|51454902|gb|CV016550.1|CV016550 tbt_008279 Normalized Nicotiana tabacum cDNA library Nicotiana tabacum cDNA clone tbt_008279

GGAGAAAAAATCATTGTTGGG
||||| ||||||| |.|..||
CCTCTATTTTAGTTATAGTCC

EST sequence (targeted fragment marked with yellow):
CAATGGCGATTCAACCTAAATCCTAACGCTCCAATCTTCCCTACCGAATTCGTGAAGTGGAAGACTTTTCCGACCAGTGGTGGGACCTCGTACACTCTTCTCCCTGGTTTCGCCATTACTGGCTTCGTGAATGCTTCTCCGACCCCGACTCTACTGATGATGTTCCTTTTCTCCCTGATATTGATTTTATCTCCCAACGCATTTCACAGCCAAGCAGGCAGCA



gi|156697105|gb|AM801625.1|AM801625 AM801625 DL, diurnal library Nicotiana tabacum cDNA clone nt005215084, mRNA sequence

GGAGAAAAAATCATTGTTGGG
..||||||||||| |||||.
TTTCTTTTTTAGTTTCAACCT

EST sequence (targeted fragment marked with yellow):
GCCGCTCAAAAAAGGATTTTATTATACATTGTGGGTAATCATTCTCACACAGAGTACAAGTTATCAAGAATCATCCTTTGTACAGTATAGCATCATTTCTCTTGATCAAAAACTTGTAAAATGAAGTGATCTCAGCACCATCACCCCTTTAAAAAATGAAATCACATTTGGCTTTAAGTGTTTCTAAAACCTCTCCTTTGAGTTGATGGTTCTTCTATAAAATGTGGGACTCTTTTCCCAAATGGAGATTTTCCCTCTTAACCAACTGTGGAAGAAAAAACAGTAAAAAAAAAGAAAGAAACCTTTAGTTCTATCCAACTTTGATTTTTTCTTTGCAAACTTTTCTAACTTTGATGTTCATATTTCCTATACATTTCCTGTAACTTGCACTTCCTATTATCTGCAACATTCGCGAACACTTTGAATCATGCTTGCTCCTTGTTTCTTTTCTTCATTCTTTTTCAGCAACCGATAAGAAGCCAAGAACTGACGATCCAATAGA



gi|156657849|gb|AM813075.1|AM813075 AM813075 seedling library, SL Nicotiana tabacum cDNA clone nt002061025, mRNA sequence

GGAGAAAAAATCATTGTTGGG
|| |||||||| ||||||...
CCACTTTTTTAATAACAATTT

EST sequence (targeted fragment marked with yellow):
CAAGCAAACAAATTGCCACGTTTATTGCTGACGAGCAACTTTAACAATAATTTTTTCACCTTGTTGCATATGCATCACATTGGGGCATCTAAATTCGTAGGTGAAGTTACCTGGCCAAATTTCCTTTGCCTTTTCAGTAAGAACTTTCAAACGTTCAGCTTTGTTGATATTGTTCCAATGCATTGGTAGAGCAACATTAAATAGCTTATCAGTTTCCATTACCTTTACCAGTGTAATTGACATACATGTGGAATTGCTCATAACGTTCTCTTGTTTCACTGTATCAGCACAAGGTAGATCTGCTTTACGGTTATTGGATTCAACTTGTTGTACAAGTTCCTTTGTAGGAGTTGGATGTTCAAAATGTTTTTTCGAAAGAAGATCTTCGGAAGCAGAGGTAATTTCTGGCACATTGCCCACTGAATGAG



gi|254633726|gb|FS387154.1|FS387154 FS387154 normalized full-length tobacco cDNA library Nicotiana tabacum cDNA clone TBK01A01NG

GGAGAAAAAATCATTGTTGGG
||||| ||||||| |.|..||
CCTCTATTTTAGTTATAGTCC

EST sequence (targeted fragment marked with yellow):
GAATAAATTCACCATTCCCAATCTTCTTCATTTGGTTTTGTGTATCAGCAATGGCGATTTCAACCCTAAATCCTAACGCTCCTATCTTCATTCCTACAGAATATCGTGAAGTGGAGGACTTTTCTGACCAGTGGTGGGACCTCGTCCACTCTTCTCCCTGGTTCCGTCATTACTGGCTTCGTGAATGCTTCTCCGACCCCGACTCTACTGATGACACTACCTATGTGCCTTTTCTCCCTGATATTGATTTTATCTCCAACGATTTCAAGCAAGAGGAGAATAAGAACGAGCTGATCACTTTGGGGATGTTGAAATGGAACAAATCACGTGTTGCTGCTGAAATCCCAAGGTATGGGAAGAAGGTGCCGAAAATCGTGAACGTGAAAGTGAGCCCTAGGCCTATTCAGCAGCCAAGGTAGAGCGAATCACAACTCGGAAGCACCTGACTCACTGAGTTAGCTAAATCTGTTTAGTTAGTGTTTCATGTACATAGCTTGTTTAACTTGTTTCAT



gi|254663019|gb|FS388144.1|FS388144 FS388144 normalized full-length tobacco cDNA library Nicotiana tabacum cDNA clone TBK01A01NG

GGAGAAAAAATCATTGTTGGG
|||||| |||||||..|...|
CCTCTTCTTTAGTAGTAGTTC

EST sequence (targeted fragment marked with yellow):
GTTCCTTTTCCTTCTCCTTTCATCCCTAATCCTCACTTTTCGTTCCAATGTCGAAAATGGGACCCACTATCTCACTTCATTCATCGATCGTGACCCTTCTCTCAAATCCCTAGTATCTCGTATTGACCTCCTCTCCGCCAGTACTCAAACTCAACACCACCACCACCTCCGTCGTGACCTCCGCCGTCATCGCCGCCGCCCTTTCCTTCACTTATCCCGTGTTGGTACCCTTGATGATGATTTCTTCTCCGGTGATTCGGACCTTGACAAATCACTATTTCATCATAACCCTAAACCTCAGCCCAATTCCACTTTCCTAATTCTTTCCGATTTTGACCCTAATTTAGGGTTTTCAAATCATATTATTGATAATGGGATTTTATTCCCTCAAGCAATTCGTAATGGGCTTGTTTCTTTCGAGCCCCCTTTAGAAAAAGCCCAACAAAATTTGACCCATCTTGATCATAATCCTGAAAATGAAAATAGGGTTGTTGATTTGCAGTTCTTAATAAAGGGTCTTGAATTGGGTCGTCGTGACGCCACGGCATTGTTGTTTCTTGTTAGTTTGTTATCAGCTGCTTATGCTTATGTGGTGTTGGCTTTTTTGGTTACTTACACTTGGGTTC



gi|156670491|gb|AM796946.1|AM796946 AM796946 COL, cold overnight library Nicotiana tabacum cDNA clone nt006002049, mRNA sequence

GGAGAAAAAATCATTGTTGGG
||||||||||| |||.|||
CCTCTTTTTTACTAATAACGG

EST sequence (targeted fragment marked with yellow):
CCCGTGGCCCTTGACATATTTTATCTAACGTTATTGAGATTTAGATTTGAGTCACATAAATGCGCACCCGAGTTTAGGAAGGGTAAATTTTTAAAATAACGTGCCCAAAACAACTACTCGATTTCAAGACATTTTCTACACTAATTGAGATAAGAAAATGAAGTTCATCAATTGTGGAATAACGATTATGAGAAAAGTGTAATATTGGATTGCTTGTTCATTTTTGAAGAATTGGACCCGACAACTAGCAAGGATTTCCACGACACAACATTATGCTTCCTTCATTCTTGTATTTTTGGATTCAAAAATCAAAATTAAGCAATTAGTTTCTTAAGACCAAAGTAACAGCACACAACAACAACATCCCAACCTTTTTTCTAAGCGCTAATTTGTGGATCCATGGCAATAATCATTTTTTCTCCTTAAACAAATTAGTTAGCTTTCAAGGTGTAATTTGGAATATATCAGAATTGTCGTGAGGTTGCTGTTGCTGCAAAGAACCATACGCAATGA



gi|190794119|gb|FG173086.1|FG173086 AGN_RNC126xa17f1.ab1 AGN_RNC Nicotiana tabacum cDNA 5', mRNA sequence

GGAGAAAAAATCATTGTTGGG
|||||||| ||||||. || |
CCTCTTTTGTAGTAATCACAC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTTTAAGGAAGAGACTATAGTAAAATAAAAGTAGCATTAAACAGGTAACCACAAGGCATGACATATTTCTGGTCTGTACAAATCAGGACCAAATGTCTAGTCAATTAATCACATGGATCTCTCCTTAAATAAACTTTCCCTTACTATAATTAGGAGCGTAGCTTACCCACTCTTGTCCTATTTTTTCTTTCCAATATTGCTTTCATTTTTTTTTCTCAAAAATCCTTCGATCTCATGCCACACTAATGATGTTTTCTCCATTACTGAAGCTTGACATTACTTTAAATGCCGAGTGTCTAGTAAATGATGCTTGTCCCTGATCAAGTGACAAGGATAATCTCAGTGACAATGGCTCGACTTCTGAGTTCTGGTTCACGTTAAGGTCAACCGCTGTTGCTCGATTGGGCATTGAAAGCGTAGGAACAGGACGAACCGGTATATACGAATTCACTTGATTTCGTTGCAACAGACTTGGATTTTCTCTTGACTGATCAATCTGTGCTGGTAACATGATAGGTGCCACTGGAAATGAATTGGTTTTGGTAGCTTCTATAGTAGTAGGCAATGTTGGTGGTGCTAGAACTGCTGGAACTAGGATTTCTTGCTTATTTTTTCCCTCTTCTATTGGCATTACTGATACCGAGTCAGTGGTGATATCAAAGAGCTAGATCGGCGGCGGCGACGATTGAGGTTGCTTCGTCGGAGGAGTACTTCTGAGCATGGCTTGCAACCTGTGTCGGTGTGCGTGTCTTTACGAGTTTCTAGAAGATTCCTCTC



gi|224704532|gb|FG624754.1|FG624754 TOBESTR040G12 TOBEST cDNA library 1 Nicotiana tabacum cDNA 5', mRNA sequence

GGAGAAAAAATCATTGTTGGG
||||| ||||||| |.|..||
CCTCTATTTTAGTTATAGTCC

EST sequence (targeted fragment marked with yellow):
CAACAATGGCGACTTCAACCCTAAATCCTAACGCTCCAATCTTCATTCCTACCGAATATCGTGAAGTGGAAGACTTTTCCGACCAGTGGTGGGACCTCGTCCACTCTTCTCCCTGGTTTCGCCATTACTGGCTTCGTGAATGCTTCTCCGACCCCGACTCTACTGATGATGTTCCTTTTCTCCCTGATATTGATTTTATCTCCAACGATTTCAAGCAAGAGGAGAATAAGAACGAGTTGATCACTTTGGGGATGTTGAAATGGAACAAATCACGTGTTGCTGCTGAAATCCCAAGGTATGGGAAGAAGGTGCCGAAAATCGTGAACGTGAAAGTGAGCCCTAGGCCTATTCAGCAGCCAAGGTAGAACGAGTCACAACTCGGGACACACGAAGTTAGCTAGATCTGTTTAGTTAGTGTTTCATGTACATAGCTTGTTTAACTTGTTTTGTATCTGCACTTTTGTACCTTGTTTTTTTCCAATAAATGCCAATACAAAAGTAGATGCAAAAAAAAAAAAA



gi|156653850|gb|AM834944.1|AM834944 AM834944 COL, cold overnight library Nicotiana tabacum cDNA clone nt006061090, mRNA sequence

GGAGAAAAAATCATTGTTGGG
|||.||||||| |||||| |.
CCTTTTTTTTACTAACAAACT

EST sequence (targeted fragment marked with yellow):
TCATTTCATTTGGAGAGGACAGGTACCCCTCATGCGGCCGCTGTAACATTTTCATATTTGAAGGTCAAAAGCAGTCCCTTGAAATGTTATAGCAATGTATGTGTACATGGTATACATAGTCCAGAATCAAATCAGTTGGGTTTTACTCTCACATCTTTGGAGAAAGAATCATGCCACAAATGCTTGCAAGTGAAGTTGAGTTATGATATTGCAATGGCGATGAATCATACAGAAATGGCACAAAACAATTAGTGATAAGGAAGATGAGACCACAGCACTTGGTTCCACAGCTCAAACAATCATTTTTTTTCCGGATTAGATAGTTGTTATTGGGGAAGAACAGGAGGTGAAATCATACGAGTGTTGTATGATTGACAGTGTCTGCATTTTTGCCCGATGATGTGGAAGAATACTTCGGTTGTGTCATTACAGTCATTACACAGAATCCAAACCTTCTTATATCTGAGATCTTCGGGCATGATTGTCTCTTCAATCTCCTCATCCATTCTTTTCCAAGCTTTGG



gi|190810663|gb|FG177816.1|FG177816 AGN_RNC118xj22r1.ab1 AGN_RNC Nicotiana tabacum cDNA 3', mRNA sequence

GGAGAAAAAATCATTGTTGGG
.||.||||||| |||..|||.
TCTTTTTTTTACTAATGACCT

EST sequence (targeted fragment marked with yellow):
TTCGCCATTTTGGATTGGGTGGTGGCATTTACACATATAGGTCCTCAAAAAACACTATTTGTGGGTGTTCGACTTATATATTGTACGCGGGATCATTTCTCTACTACAATCACCATAAACATCAGGCTTTCGTCGTAGTTGCTGGCGGGCTTCTTGGTATTGGCGCGGGCCTTTTGTGGGCTGCTCAGGGAGCTATTATGACGTCGTATCCGCCACATGATAGGAAAGGTCCATTCGTCTTGTATTTTAGTTATGGATTACTTGATGCCATGTTTCAGAGCATGGTTTATTGGGTCATAGGAGCATTGGCAGATGATTCTGAGATTCTCAGCAGGTATACTGGCTTCTATAAAGGAATACAAAGTGCAGGAGGAGCCGTTGCTTGGCAAGTTGATTCACGTAACGTGACATTCCTAAACCAGCTTATCGCGAATTGGGCGCTAACCACTATTAGTTTTCCATTACTGATAGCTCTTATACTATTAGCAGTGAAGGATGATAACAAAGAGGAAGAGAGAGCAACTAAGGAGGTTGCTATTTCTTCAAACCGCGATATCAGTACTACAGTGGACAAGCCCAATAAGGAATAGTTCCTACCAGCTATCTTTAGGTTTGTTCGCCTGATTTATTGATGGGACAAAACTGTAAAGTGTGGACAATCAACCACAGTATAATTTAGTTCAGTCGCTGAGTAAAATGTCTTAGCTAATGTGTGTTTAATTCTCTTCAGCTTCCAGTAATCATTTTTTTTCTAATATTCTTACAGCTACAGCAATTTTGATTTTATGCTCTTGCTTATTTTTGTACTTGCTCCAATAACAACACAAGCAAGAGC



gi|52838458|gb|BP534731.1|BP534731 BP534731 MAT005 Nicotiana tabacum cDNA clone BY33317, mRNA sequence

GGAGAAAAAATCATTGTTGGG
.||.|||||||| |||||..|
TCTTTTTTTTAGGAACAATTC

EST sequence (targeted fragment marked with yellow):
TTTCACCATTGGGTATCTTCTACGTGCTTAACAAGGATTTTTTTTCTGTCTTTTGCTATATTGTAACTGTTTAGGAACTTACTGTATCTTCAGCATATTAACATTGCCTCTTTTTTTAGCCGTCAACCTAACGAGCTAGTGAAAATGGTGGATGTATGTAGATGGAATTCATAATAAAAAAGAATCTTTCAATAAAGAATTACTAATAGTTATGT



gi|92039512|gb|EB451217.1|EB451217 KT7C.109P01F.051221T7 KT7 Nicotiana tabacum cDNA clone KT7C.109P01, mRNA sequence

GGAGAAAAAATCATTGTTGGG
||||||| ||||||| |..|.
CCTCTTTGTTAGTAAAAGTCT

EST sequence (targeted fragment marked with yellow):
GAAGGAGATCATCAAGAAAGGGTATTACACAACAATTATGATTTACAAGTTTCCACCTTCTCAACTCCTCATGTTAATATCCATGAAATGGGATTTGTACATCACTTTGAAGATCATCAAAATCAAGTCATGAGTTTTTTAACTTCTCCTCTTTCACACTCTTCTCATATTCCTGATGGCGCCGCCAGCACCAGCGCGGCGCCACCAACCGCCACCTGTACTACCCTAGCTGCTGCCACCAATAACGGTAGCAGTTCGCTAGGGTTTTATCACAGTGAACTTGTCAATAGGTCTTCCTGGAATAACGACCAGGTTGAAACACTGGATCCCAAGGCAATTATTGACCAAAATTGCAGCGGAAATGCCAGCGATGGTAACAATTCGTGGTGGAGGAGTTCACCCTCAGAGAAAGGGAAGGTGAAAGTGAGAAGAAAGTTGAGAGAGCCAAGATTTTGTTTCCAAACTAGGAGTGATATTGATGTTCTTGATGATGGTTACAAATGGAGAAAATATGGTCAAAAAGTTGTCAAGAATAGCCTTCATCCAAGGAGTTATTACAGATGTACACATAGCAATTGTCGAGTAAAGAAGAGAGTTGAACGACTTTCAGAAGATTGTCGTATGGTAATAACAACCTATGAAGGTAGACACAACCATTATCCTTGTGATGATTCAAACTCTTCTGAAAATGATTGTTTCTCCTCTTTCTAGAGTACTACGTACTTATTATATATGTATCTCCATATATACGCATCTACCTTTGTGAGGAACAAGGGCGAAAGTAGATGTTAATTACTTGTGTATCAGATTCGGTCGAATTTAGTTGCTTTTGTTCCAACAATGTATTTGTATTA



gi|156646391|gb|AM840241.1|AM840241 AM840241 COL, cold overnight library Nicotiana tabacum cDNA clone nt006011019, mRNA sequence

GGAGAAAAAATCATTGTTGGG
..||||||||| ||..||.||
TTTCTTTTTTATTAGTAATCC

EST sequence (targeted fragment marked with yellow):
GCAGGTTTATGTCAAACATCAAATCACGATCACCAAATCCATCTTAAACACCCATTTGGTTAGGAACTGTCTCTTTAGCCTATCGGATCTACCGATTCATTTTCTCTATCAAATACAACAATGGAAGGCTATAAGGCACAGCTGGCTTGGAGACAAGTTTGCAGCTTACCTCTGAACACGGACCGCTGAGGAATAACATTTTGAGGTAATAAAGGACTAAAATTTTATCAAAGTTTCTGAACTTATCTATGTTTAAGGCAGTGAAGCGCAAGGAGCACTATCTGCCTAGATTCCCTAATGATTATTTTTTCTTTTGGTATCCCTTTCAAATCATCTTCAAGATTTCTTAGGAAGATGGAAATTGGAGCCAAATTTGGACTTACCCATAAGATAGAAAAGTTAAAGCTGATATTTCTCAAATTCAATAGCAGAACTATTTAATCACCGGATAC



gi|254632823|gb|FS425211.1|FS425211 FS425211 normalized full-length tobacco cDNA library Nicotiana tabacum cDNA clone TBK02GR006

GGAGAAAAAATCATTGTTGGG
|.|.|||||||||||.||.|.
CTTTTTTTTTAGTAATAATCT

EST sequence (targeted fragment marked with yellow):
GGTAAAAAATCTATAGAGGGAGATGGAAATGGAGAAGAGACTCTATGTACCTGCAGACGACATTGAACTTCAAGACATTGAAAGTGGAGAATCCCTTCGAGTTAGGGGGGCATGTCGAAAGAAAGAAAATGATACTTCCCAGAAAAGGAGTAGTGCAGAGAAATTACAAAGAGATGATTGGATAGAAAGGAAGAGGAATACATTAATGATTGTGGCTTCGCTAATTGCAACCATGGCTTTTCAAGCTGGTCTCAACCCTCCTAGTGGTGTTTGGCAAGGTGATTTACAAGGTATATATAATAGCTCTAATAATGATTTTTTTTTCTCACCAAGTTAATCCAACATTTTCATGAAAGTTTATAGAAGTATGACTGCTTAATTCTTTGGTAAAAAAAAAAAAAAAACTT



gi|156682173|gb|AM833720.1|AM833720 AM833720 seedling library, SL Nicotiana tabacum cDNA clone nt002092073, mRNA sequence

GGAGAAAAAATCATTGTTGGG
|||||| |||| ||||||.||
CCTCTTATTTACTAACAATCC

EST sequence (targeted fragment marked with yellow):
AAGACATATACCCTAAAAGATAAATTTACAACAGTTGGCAGAGGCAGCTCTATTATGGCTGCACTCCAATAAGGTTACAAATAATCTTGTGTTCTAACTAATTCTCAACGAATTTTAAATATAAGAACCCTGCCTAAAATAAAAGGGTTCTGCATATATAAACCTAACAATCATTTATTCTCCATTTCCTCGATAAATTTTCGTTCATTTTGACATTTATGTCCAAATAATTGGAATGCTATGCTTCCCTAATAACTGCATCATAAAGTCGAATATTTCGAGAACTCTAAGCCAAGAAGACAGATAAGACCGTGCCTTTTTAACACCCCCTTAGGATACTTGCGACATTTTTTCCAATCTCTTCTTTTGTTTCCTCACATATAGGAACATCGCCAATGTACATATCAAAAAATGCCCTACACAACTCTCTACTCTGAACTGCTCCGATATTGTTTCCTCCAATCTCAGTAA



gi|92037127|gb|EB448832.1|EB448832 KT7C.101C03F.051216T7 KT7 Nicotiana tabacum cDNA clone KT7C.101C03, mRNA sequence

GGAGAAAAAATCATTGTTGGG
|.|.||||||||||||..||.
CTTTTTTTTTAGTAACGGCCT

EST sequence (targeted fragment marked with yellow):
TGTGGCCGGTGTGCTTCTGATCCGCAAGAATGAGGATATAGAAACAGTCAAAAAGTTGGTGGGAGTCTACTTTTTATGACAAGCAGTGGCAAGCATCTTGGAAAGATGAGAACTCAAGCAGTTCAAAGGACTCTTGAACACATTTCTCACTTAATCTTTGATTTTCATGTATTTAATTGGATGACTGTGATCAGGAGATATCAAGATGCCAGTCAAAGGAGAGCGTAGAATTGTATTTGCCATTTTGTTTTAGTTCTTTTTTTTTTGTTTTAGTTCTCAATGTATCTTTCTTCTTTTTTTATTTTGTTTTCCGGCAATGATTTTTTTTTCCTCGTCTTTGTTGTAAACAAATTTTTAGCTGATCTATAATAGTTCTATTTC



gi|190805440|gb|FG144584.1|FG144584 AGN_RPC015xj17f1.ab1 AGN_RPC Nicotiana tabacum cDNA 5', mRNA sequence

GGAGAAAAAATCATTGTTGGG
|||||||| || ||||||| |
CCTCTTTTGTAATAACAACAC

EST sequence (targeted fragment marked with yellow):
GAAATTAGTTTTCCTCCATTTTCATCCTTTACTCCAACTCCATCACCAACACCAACACCAACACCAACATCAGCACCAACACCGTTTTTTAATGATTTCGCGTTTCCTCCATTGTCATCTTTAAGTCCAACACCAGCACCAGTAGGTAGTGATCAAGATCCTGATGTGAACGGTGTACCGGCGCCTGCAGTGGCACCAATAGGGAGTGGTCAAGATCCAGAAGAAGGTGGCATTGAAGCACCAGCACCACTTTTAACTGATACTCCTTATGGACTTTATGGTCCTCATTCTCAGGAAATTCCTTCAACTGTCACAAATCTTGATGAGGTTGAAACTCAAACTCCTGCCGAGGAATTCCAAGGTGCTAGATTTAATACAGATGAGTCCTACAATAACAATGGTTATGATTCCAACAACAATGGCTACTCGGAGAATAACAACAACAAGAACAACAATGGCTACTCGGAGAATTACAACAACAACAACAACAATGGCTACTCCGAGAATTACAACAACAACAACAATGGCTACTCCAAGAATTACAACAACAATGGCTACTCCAAAAAAATCAACAATAATGGTTACTCCCAGAATTACATGAACAACAACAACGGCTTCTCCGAGAGTTACAACAGCAACAACAACAACAACAATATTTTCTCCGAGAATTACAACAACAATAATAACAATAATGTTTTCTCCGAGAATTACAACAACAATAATAACAATAATGTTTTCTCCGAGATTACAACAACAATAACAACAATGCTTTCTCCGAGACTACACAACAATAATGTTTTCTCCGAGATTACAACAAAAACATACACATGCTTTCTCTGAGATACAACAACAAAAACAACATGCTACTCTGAGAACTACATCAGCTAGCAGCTACATAACATG



gi|190884750|gb|FG135474.1|FG135474 AGN_ELP010xc01f1.ab1 AGN_ELP Nicotiana tabacum cDNA 5', mRNA sequence

GGAGAAAAAATCATTGTTGGG
|||||| |||||||..|...|
CCTCTTCTTTAGTAGTAGTTC

EST sequence (targeted fragment marked with yellow):
GGAATCAAATCATCAAACTTTTATCATCAACCAATCAACCACCATGAACCACCACAATCACCACCGTCAACCACCACAACGACCACCAATAAACCACCAAACAACAACCCAAATCCTCAAACAAACCACCACTACCTTCACCTCCAACCTCCTCCTTTTCCTTCTCCTTTCATCCCTAATCCTCACTTTCCGTTCCAATGTCGAAAATGGGACCCATTATCTCACTTCATTCATCGATCGTGACCCTTCTCTCAAATCCCTAGTATCTCGTATTGACCTCCTCTCCGCTGCTACTCAAACTCAACACCACCACCACCTCCGCCGTCATCGCCGCCGCCCTTTTCTTCACTTATCCCGTGTTGGTACCCTTGATGATGATTTCTTCTCCGGTGATTCGGACCTTGACAAATCCCTATTTCACCCTAACCCTAAACCTCAGCCCAATTCCACTTTCCTAATTCTTTCCGATTTTGACCCTAACTTAGGGTTTTCAAATCATATCATTGATAATGGGATTTTATTTCCTCAAGCAATTCGTAATGGGCTTGTCTCTTTCAAGCCCCTTTTAGAAAAAACCCAGAAATTGACCCATCTTGATAATAATACTGAAATGAATTGTAAATGAGAATGAGAATGAAATGGGGTTGTTGATTTGCAGTTCTAATAAAGGGTCTTGAATTGGGTCGTCGTGACGCCACGCATTGTGTTTCTTGTAGTTGTTATCAGCAGCTATGCTATG