| mature miRNA: GGCCGGGGGACGGACTGGGAA species: Citrus unshiu database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|32027914|gb|AU186482.1|AU186482 AU186482 Citrus unshiu whole ovary anthesis stage Citrus unshiu cDNA clone pcMOvA022644, mRNA GGCCGGGGGACGGACTGGGAA EST sequence (targeted fragment marked with yellow): ACTTTGACATTCAGAGCACTGGGCAGAAATCACATNGCGTGACCATCCGCAGGGACCAATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCNTTGTCCGTACCAGTTCTGAGTCGACTGTTNGACGCCCGGGGAAGGCCCCCGAAAGGACCGTTCCCAGTCNGTCCCCCGGCCGGCACNCGGCGACCCGCTCTCGCCGCGGTGGCAGCTCGAGCAGTCCGCCNACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGCTGTTCACNTTGG | |||||||||
gi|209930740|gb|DC892879.1|DC892879 DC892879 ALM Citrus unshiu cDNA clone MAM9A39 5', mRNA sequence GGCCGGGGGACGGACTGGGAA EST sequence (targeted fragment marked with yellow): GGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGTTTCCGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCNAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTGACATCCGCAGGGACCATCGCAATGCTTGTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCTGACTGTTCGACGCCCGGGGAAGGCCCCCGAAAGGACCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGGTCTTGTCGCGGTGGGA | |||||||||