| mature miRNA: GGCCGGGGGACGGACTGGGAA species: Nicotiana tabacum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|156659922|gb|AM796612.1|AM796612 AM796612 COL, cold overnight library Nicotiana tabacum cDNA clone nt006018086, mRNA sequence GGCCGGGGGACGGACTGGGAA EST sequence (targeted fragment marked with yellow): AAGTCATTTCATTTGGAGAGGACAGGTACCCCTCATGCGGCCGCTGTCATTGACTTATATCCACTCTTCAACAATTCCGCCAATTTGTCCCTTTTAACCTAGGAGGTCACTGCTCAGTTTGTTCCTCCCAGTATTTATTTCCTTTTATATAATCCAAACTTATTTCCAGGCTGTTCCTCGGCTTTGTGTGTTGTTCGCGTTTGAGTTGATGCATTTTATTGAGCTGTTCTGTTTGTTCGATGATCATGTCTTGTCTTGACACCAACAGTAGTTTGGCCTTGTGTTTTCTCTTGTAACTTAGGTCTACTTACTGCTACATTTTGTTTAGGTGACCCTTGTAACTCCGCCTGTCTAAACAGCCGGTCCCAAGCCCGGATTAAGGAGGAGGGAAGGTGTCAATGGTTCAATTAGTCAATCTGTTCTTTTTTAATCAATAGAAATGATTTCTGGAGCTGCCTTTGACTGCTTCTCCTTATTTGTCTTGAGCAATTCGGATGAAACTTTTGCTCCCTAGATCTGTCATTGTTTCTTATTTATCTTTATGCCACATCTGATTACAGTTAATAATACATATCAGGTATACATGGCAGCTAGA | |||||||||