| mature miRNA: GGCTCGGTTCAGTTCGGTTT species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|73868520|gb|DT471258.1|DT471258 WS01213.BR_C19 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01213_C19 5', mRNA sequence GGCTCGGTTCAGTTCGGTTT EST sequence (targeted fragment marked with yellow): GGCTCTTTTGCTGAAAACTGAAAAGGAAGGTTGGAAAAAAAAAAAAAAAAAGGCTGTGTAGATAGCCAAAAAAACAGTGTGGCGCTAGCAACTGCCTTTTACTTGCGTCCCTGACTCCAAGTATACAAATTAAAAATGCCTTCTTCTTTCTCAGCTCCAATCATCAGAAGCTGAGCTGAGCTGAGCTTCAACAACCCTCCCTCTGTCTTTATTTATTATCGATCTCCCTCTTATTATCATACTTCTTCTTCTTCTTCAATCATTATATATATATTACATTACAACTCTCAAAACAACTAGAAAAAAGAAAATGTCAAAATCAGACTCTTCCCCGGAAACAGCTCGCAGCNCGCTTGGCCGTGCTCACCGCTCATTTAGTTGGAGCAACGACACTCGAGTCATCTTCGTCGTCGATTAACCGGTCTTGGTGGTCTGCGCAGGTCTCTCCTCCTGGAAACCTCCGGGGCGCTTTGACGGTGATCGATGAGAGGACTGGTAAGAAAACCCAAATTCCGGTCTCTCAAGACGGCACCGTCAAAGCCTCTGATTTCAAGAAGATCTCGACAGGAAAGAATGACA | |||||||||