| mature miRNA: GGGAGTGGAGTGGAGTGGAGT species: Physcomitrella patens database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|208386716|gb|DC929162.1|DC929162 DC929162 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. paten GGGAGTGGAGTGGAGTGGAGT EST sequence (targeted fragment marked with yellow): AATGTCATCTAAGTCCGTCATGGTCNCCATGACCACAACATTCATCGCTCCAAGNNATTGNNNATTCNTTTTCCNCACCACCCCCACCAGCTATCTCATGCAACATTCATTACCAGTTGTGACTGCACATTCGCTATCTTGTTCAATGGAAACTCGNANNCGTTCNNTGGAANNTTTGCGCCCTGCNCANAAACCAACCCACTTCANTCTCCCCCTCTACTTTCACGATCNACNACCNCATCTCANAATCAACCACCACTTGCATACCCGACATCCAACCACCAAACCTTCCGGACCCACGACCACTGCTCATCCCTCACAACCAAAATACCACTGCACTCCACTTCACTCCANCNAACGTCTGTCAGCTCATTTCCACCTACCACCACGGCCACCCGCGTCCCTGCGTCTAAATCTCAACACACCATCTCAAACAATCTCTCCCCACCTTCAGATACTTCAGGAATCCCAACTCCTCCGGTATCAGAAACAGCAGCGCCCGGCCCTGCGCTCCTTCACCTCTTGCAGTTCGACCCACTCTGTGAATGTACTCCTGCACACGCAGTCCTACACCTTCAGTCATATACCACATACCACCCACCCTCGCACCCAAACGCAACCAAAATCCAACCCCAAACATCCACTACCCCCAGGTTGCATCGACTCTTACCCTTGGGTCATCTGGAGGGTCATACTGAATAATCCAGTCCTGCANGCACCGCACCACACCCACTCATCAGGAACCACACACTCCCTACTCGTANACGCGCATCTCCACAGCCAACCACNACTGGATCCANACATACACTGCTGGANGGCTAGCCNNGTGCANNACGTC | |||||||||
gi|208396601|gb|DC915913.1|DC915913 DC915913 ppaa full-length cDNA library; antheridia and archgonia Physcomitrella patens subsp GGGAGTGGAGTGGAGTGGAGT EST sequence (targeted fragment marked with yellow): ATACAACCCNTACCCCCAATCACGCCAGNTTTTTATGACTGGCCTCACTTCCGCACAGCTGAAGGAGCAGAGGCCGCGTTTGTGCCGCNTCCAAAACCCGTTCCTTACCAGACTGTCAGCGACTTGTGGAACATCTTCCAACCGCCGTAATGGCGTGCAGTTGACGACTGTGGGTCTCTTCCGCTTCCATGCATCATCATCGTATTGGATGGCGGACTGACACTGGGTTCGCGTGCGTCTCGGAGGGGAGAGAGAATTAGTGATGAAGAGGTGCACTTACTCGCAGACCACCCTCAGCCAGCCAGTTAGCCAGCCAGAAGTGGGAGAGTCGGGGTGGCAGCATTCGTAGAGGTTCCAAACATTGGCTTTGATTGCAGCAGCAGCAGCTCTGGGGCCCATGCGGGGAGCCGCCTCACAACACATGCACCAGTAAGTGTAAGTGAATGTTGTTATGTAGTGTGTGCTGAGCTGGGACAAGCGGCAGTGCCCAGGGAGGGCTCCATCCAGCCAGCCATCCCCCGGCAACAAAACCACTCCCCGTGACCGACTCCTACTTTAATTTACTTTACTCTACTCTACTCTCTTAGTAGAGTTCGCCACGCCCCAGTAGCTAATCAGGCTTTGCCCCTGCAGCCGCAGAGTAGTCTCCAGATATCCGGAGCTGAGATTTGCTAATTCATTCTCTTCACGTGTTTACCTTTGCTTCATCTTTCAAACAATCCTATTTACAATCTTCAAAGAGAAATGGGTAATAGCAAAGATATAGCACGGTTTAGGTGCATCTTGAATCTTTATAGGGGAAATCTCGTCCAACTTATGAGTAAAAAATCACATGAAATT | |||||||||