miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: GGGGTTAATTAAGTTTTTTGG
species: Citrus clementina
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|110877739|gb|DY296725.1|DY296725 IC0AAA90DB05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence

GGGGTTAATTAAGTTTTTTGG
.|| ||||||||. |||||||
TCCAAATTAATTTCAAAAACC

EST sequence (targeted fragment marked with yellow):
CCCCTCTTCGTTGATCTCTTTCTTTAGTTCCCTTTTCTCTTTCTTTCTTTCTTGGTGGCTCTGGTATTCCCTTAGTTTGATTCTCCCACCATTTCTTAAAGACCCAATCAAACTTTATAAAAGATAAAAGAGAAAATTCAAACATGGTTTTTTCATCAGTTCCAGTCTATTTAGATCCCCCCAACTGGCATCATCAGCAACCAAATCATCAACAAGGTGCTGGCAGTGAAAATCCTCATCAGCTTCCACCTATTCCTTCAGCTCCTCATCATGTTGTTGGTGTTGGTGGTGCACCGGGCGGCGCTGGCTCTATTAGGCCTGGTTCAATGGCTGATCGAGCCAGACTAGCCAAGATTCCACACACAGAGGTACCCCTGAAGTGCCCTAGATGTGATTCCACCAACACCAAGTTTTGCTACTTCAATAACTACAGCCTCTCTCAGCCACGCCACTTCTGTAAGGCGTGCCGCCGCTACTGGACTAGAGGGGGCGCCCTAAGGAATGTACCCGTTGGTGGTGGATGCAGAAGAAACAAGAAAAGCAAAAGCAGCAGCAGCTCCTCAAAATCCCCAGCCAATAACACTGAGAAGCTCCAGCAAATGGGTAATTCAAATTCCACAAGCTCACTTCCCCCTGAGATTATTGGTCATTTGCAACAACAGTGTAATACACCTCATCAAATACCGTTGATGCCTTCTTTACATAATCTCTCTCAGTACAATATGGGGAGTATTGGGTTAAATTTTGGAGGAATTGGAGCATCAAGTGGTGTTGGTAGTAACCATATTACTGATCATGTGGGGTTCCAAATTGGAAGCAATTCAACCATGATTAGTAGTGCTATATTATCAACCGGAAGGTGGGTTGCAGCAATTCACTTTCTTTTGAACCCCCCAATACGGGCTTAATATCCTTTCCAAGTGAAAGGAATTAAAGCTCCATCTTCTTTATCCCTGGCTTTCAACCCTAAGGGTTTCCGAACCAGCCCCCCCGAAAAAGGGAAAATCATCCCAAAAACTTTAATTAAACCTAAAACTATTTTTTGGATTTCCAAAAAAAACCAATTTGGGGAAGGGGAAAAATTGGGAAGGATCTTATTCCCCACTTAAAAAATTCCCTTTCTCAAAAAACAACCCCCCTAAAAAAATTTCCAAGCTTTTATAACCTTGAGAACTGCTCCCCCTTCCGTTACAATATACCACCCAAAAACCCCTTAAACGCAAAAAAAAATAGAAAAAATTGAAAAGAATGAAATCACACGTACCCTCTCGGTTTAATCATTCCTTGCGTGGTGTCTAGAGATTTTATATTTAAAATTACAATTAATAAAAAAGAAGATGTAGACAAAGAGGAACATAAA



gi|110863411|gb|DY286362.1|DY286362 IC0AAA64DF05FM1 CitNFL Citrus clementina cDNA 5', mRNA sequence

GGGGTTAATTAAGTTTTTTGG
|||||.|||||||| | ||||
CCCCAGTTAATTCACACAACC

EST sequence (targeted fragment marked with yellow):
GGGGGAAATAAAAACAAACTCCCACCCCAAAAAAAAAAAGCCGAAAAAATTTCCCCCCCCGAGCCGGGGGTATATTTTTGGGAAAAGGGGACCAAAAAAAAAAAAGGGGGGGGCTTAAACGGGGGGGTTTGAAGTTAAAAAAAAAAAAGTAAACCCCCCCGAGGGGGGGTGGGCGGAATTTCCCCAGAAGCCCCCCGGCCAGGATCCCCCGGGGGGAATGAATTTTCCCTTTTCGGGAAAAAACCGTTAAAAAAAAAAGGGGGCAAAAAGGGGGGGGGGGGGGCGGGGCCGGGTTCCTTAGGAAATTGCCCCCAGGGGTCCCCCCAAAACCCCCCCGGGGGGCCCCCCCCGGGGAGAGGCCAACCCCCGGGGCAGAAATCCACGGGCCCGGGGGGGGCGGGGGGGGGGGGCCCCCGGGGCCTAAAGGCCCGGTTTAAAGAAAGAAACCTAAAGCCCGACCCCGCACCCACCCCCCATTCCCCCGGGGGAAAATTGCCCCCCCCCCCCCCCCGGGGTTTTGCCCTTTTCATAAGGGGGGACCCCCCCCCCCCAACACACTTAATTGACCCCCCCCTGGCCGGGGGCTTTTTAGGCCGCGGGGGGGGGGAGGGGCTCCACCCCCCGGGGAGAAAATCCAAAAATTTGGGGGGGCACACTAAGGGGACCAAAAACCCCGGCAAAAAAGATTTTCCCCCCTAGGGACCCCGCCAAACCCTCCAAAAAAAACTTGAACCCGGCCCCGCCTGGGGGGGGAAAGAAGAAAGGGGGGGGCCCCCCCCGGGGTTCTTGAACCCTCCCGGGGGAAAAACCAAAATTCCCCCCCTGCCCCCCGAAAAATTGGGTTTAAAAGGCCCGGCGCGGGGGGCCAAGGGGGGATCCCCCTCCGAAAAGGCAAGGGGCCCCCAACCCCCTTTTATTCCCCCGTTCCCCCCCCCGGCCCCCCCCTGGGCCGCCCCAAACTTTAATTGGCCCCCCGCCCCCCCCCAAAACCCCCCCCGGGGAAAAAAAAACTGAAGGGTGATTATTGGGCCCAAAACCAAAAGGGGGGGGGGGGGGCGGGAACCGGGGCCAAAGGGGTTTTTTAAAAACACCCCCCCGCCCCCCCCCACCAAAAAAAAAAAAAAAACCAGGGGGGGGGGGGGGGCGCGGGGCCCCCCCCCCCCACACAGGGGGAGGAAAACACACACACCAGAAAAAAAAAGAAAGGCCCCCCCCCGCGAGAAGGCGCACG



gi|110884858|gb|DY302649.1|DY302649 KN0AAQ3YI20RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence

GGGGTTAATTAAGTTTTTTGG
|||||| ||||| ||||||||
CCCCAAATAATT-AAAAAACC

EST sequence (targeted fragment marked with yellow):
AAAATTGCCCACACAATTAAGTAGTTGGTCTAAACGATTATTCCAATGATACGACGCCGTTTCCAAGAATAACCGCGGCCTTTCTTCCACTTGACGGCACCCGCAAGTCATCAAATCTGTGAAACTTGTCAAAAACCCTAAAACCCTGCACAAAACAAACTGTCGCAAAACCCATCCTTCTCTCTTAAATTCAATAAAATAATGGCTGGAGGCCGATTCAGGGAGCTTCTAAAGAAGTACGGAAAGGTAGCACTTGGGGTCCACTTCTCCGTCTCCGCAGCCTCCGTCTCCGGCCTTTACATCGCCATCAAGAACAACGTCGACGTCGAATCGCTACTCGACGCGTGGCACCTCCCAGGCCTCTCTTCCAAAAACCCAGAAGAGGTTTCGAGTTCGTCATCCCAATCCACTGGTAAGATCCCTCTAGAAGGCCGAGAGGTACACCACGAAGGTGGCATTGGCAGCATTAGTAATGGTGGTGAATCAACGGTGGTGATTCGAGAGGAGGGGAAGAAGGAGAGGAATCGTACGGCTGAGCTTGCTGCATCATCTGGTGGGGCCTTGGCTTTGGCCGTGCTGTGTAACAAGGCCCTTTTTCCGATAAGGGTACCGATAACCATCGCGCTTACGCCTCCAGTGGCGAGATTCTTGGCTAGGAGGAGGATTTTCAAGACCAATGTATGAAAATTTTGATTTTGATTTTTGTTTGGTTCCCTTTTGCCCTTTATGATGTGGGCAATTTGTTGTGTATGATTTTGTCTTAAAAATTTAAGAACCTTAGAAAGGGAATTTTGGAAAATAAATTTGATAATTTTGCCTACCCAAAAAANCACAAAAAAAACAACAAAACCAAACACCAAAAAAAAAAAAACAAAACACCCAAACAAAAAAAACAAAACGGGGGCGCCCCTCCAAAATACCCCCCAAGGGGCCCAACCCCTACCCGCCCCCCCCCTCCCTGGGACAAAGGGTCCCCCAAAAAGGGTTCGAATTAAAAACCCAGCCCCCCGCCCGCCCTTTTAAAACCCTCCCGGCCGCGGGAAAAACCGCCACCCCTTGGAAATTCTTTGGAAGAAAAAACCTTACTTTCTCTGGGGGGGGGACAATATTGGGGACAAACCCCCCCCTCCCCCAAAAAATTAATAAACCCCCTCCAGGGAAAAAAAAAAAAAAAATTTTTTTAAAGGTGTAAAAATATGTGGGTAAAAAACAAACACCCCCCCCCCATACTCCCTCCTCTGCCCCCGCCCTGTTGGAGAAAGTAGTTTTTTTTCTCCCCCTATTATC



gi|110844457|gb|DY266312.1|DY266312 IC0AAA19DC05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence

GGGGTTAATTAAGTTTTTTGG
|||||| |||||.|||||. .
CCCCAAATAATTTAAAAAGGT

EST sequence (targeted fragment marked with yellow):
TAAAAATAAAAAAGGGGAGAGAAAAAAAAAATCTCGCAACAGAGTCGCTATAAGAATTCCCGGAGATCAAATCAAATTTCACTCTCTGCAATCCATGGCGGCAGCCACTTCGTTGTTAGAATTGAATGCATTTAAATGGACACAATTGCGCCCCAATCCCCGCCTGTTCCCTCACAGACCCGCCAAATTCAGCGCAAATTTGAACAATTTTCGAACCCTTCAACGCACCACCACCGCCCGCAATTTCAATGGAGTCAAGTGCTTCTGCAGGCCCCAAACCATCGAATCTTCATCCACTTCGAGCGCTAATCCAGATCGATTTTTCGACCCAGTTGAGATTTTAACCAACGCCCTCTCTAAATCAATTCAGGCGCTAAAGAAACCAGCAGTTATTGCGGTTGTGTTAGGGTTTCTGTTAACTTGGGATCCCAATTTAGCTTTTGCAGCGTCGGGTGGGAGAATGGGGGGAAAGTCATTTTCGTCGCATTCTTCCTCCTCGTCGTCGAGGACTTACATGGTGGAGCCGAGGGTTGGGTTCTCTGCTTCGGCGCCGTATTATGCTCCGTCCCCGTTTGGTGGGGCCGGTGGGGGGATTTACGTGGGTCCCGCAGTTGGGGTTGGGGTGGGTGCCGGGTCGAGTTTGTTCTTGATACTGATGGGTTTTGCAGCTTTTGTTTTGGTTTCGGGGATTTTATCGGACCGGTCGGATGGGAGTGTGTTGACTGCTACTGAAAAAACTAGTGTTATTAAGCTTCAGGTTGGGTTGCTGGGCATGGGGCGGTCTCTTCAGAAGGATCTCAATCGAATTGCTGAAGTTGCAGATACATCCAACCACAGAGGGTCTGAGTTATGTACTGACAGAGACAACACTATCTTTGCTTCGGCATCCTGACTATTGCATCTCTGGTTATTCCTCTGTGGATGTGAGCGAAAATGAAGGGAAGGGAGAAAAAAGCCTTCATAATGCTTTCTATTGAAAAAACAGGGAAATTTTGAGGAAAAGACACTTGGTAAGGTTAACACCTTATAAAGGAAAACCCAACCCCCCCAAAAGCTAAGGGAATTTCCATGGAATACTAATTGAAACAACTTTGGGGGCTGCTGAAAGGGGGGCATAGCTCCCCGCCACCATGGGCGTGGAAAAATTTAATAAACCCCTGAAAAAACCTCCTACCTTTTTCCCCCGCAAAAACCTGGGGCAAAAAGGGGTTTGTGGAACCCCCACAAAAAAAAAAAACACACCCTGGCCGAAAAGGGGGGACACCGGGGGAAAAAAAACCCCCCCATTGGGGGCGGCCTTTTAAAAAAAAAATATTTTTTTGGGGACTACTGGGTGGTTGTGAG



gi|110838513|gb|DY260248.1|DY260248 KN0AAP11YN16FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence

GGGGTTAATTAAGTTTTTTGG
||||||||||||.|||| |
CCCCAATTAATTTAAAATAGG

EST sequence (targeted fragment marked with yellow):
TTTTGTTATAACTTTATGTTGGCGATATTTCACAAGGCGTTTGCCAATCCGCCTGAGGAGCTTCATAGCCCTGCGTCTCAAAAATGTTCGAAGAGGCCTAAACTCCCTGAGGATACCCTCAGTGACTTCCTCTCCCGTCACCCTGATAACACTTTCTCCATGAACTTTGGCCATGCTGCTGTTCTTGCTTACGTTCCCCCTCACTCCCCTTTAACCAAGGACCGAAGGTTGTTTTGCGGGTTTGAGGACATATACTGTCTGTTCATGGGGTCCTTGAACAACTTGTGCTCGCTGATCAGGCAATATGGGTTGTCAAAGGGAACCGATGAGGCCATGTTTGTGATAGAGGCGTATCGTACGCTCAGAGACCGGGGTCCTTACCCAGCTGACCAGGTTGTCAAGGATCTTGATGGGAGCTTTGCTTTTGTGGTCTACGATAGCAAGGCCGGCACGGTCTTCACTGCTCTGGGTTCTGATGGGGGAGTGAAGCTGTACTGGGGAATTGCAGCCGATGGATCTGTGGTCATATCTGATGACTTGGAGGTCATCAAAGAGGGATGTGCCAAGTCATTTGCTCCCTTCCCACAGGGGTGCATGTTCCACAGTGAAGGAGGATTGATGAGCTTTGAGCATCCAATGAACAAGATAAGGGCAATGCCAAGAGTAGATAGTGAAGGTGTCATGTGTGGAGCCAATTTCCAGGTTGAAAAATACCCTAGGATCAACACCATTCCCCGTGTGGGAAGTGAAGCCGACTGGACTATCCATGGGAACCACTTTATTTATCAATTAAGGGACCATTTATTTGATCTTGCTGTGAATTTGCCCACCTCCCAACTCAAAACCTGAAACTACTACCCTTTCATTTTTCCTCCCATTAAGTTAAAAAAAAGTTGTTCCCCCCCCCCTGGAAGGGTCCTTTTGACCCTTTTTCTTTGAAAAAAGGTGTTTTTCCTTGTTAAGGGGGCCATCCCCCCATTTGTGGATAAAATTTAATTAACCCCGGGTTTGGGGTTTCCAAATAAATTTTGACCCTGGGAGAACGGGAATAGAAATTTTTTCCTCTTTGCCCC



gi|110841456|gb|DY260196.1|DY260196 KN0AAP11YK10FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence

GGGGTTAATTAAGTTTTTTGG
|||||| |||||.||||||
CCCCAAATAATTTAAAAAAAA

EST sequence (targeted fragment marked with yellow):
TCCCCTCACAACCTCCAACGGCCACAAACAAAAAAGCAAGTGCTTCTTATTGACTGTTTTGTGTTTTTGAGGGACTAGCAGAAATGGAAGGTAAAGAAGAGGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGACGGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCACCGGCGCCGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACTGACAGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTCCGCATTCAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTACTGCACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACCTTTTCTACATGGTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCCCCGGCGGTGCCCACGTCGTAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCCGCCACTGATGCCAAACGGAGCGCCCGGGACTCTCATGTTCCCATTTTGGCCCCCCTGCCATTGGGGTCCCCGTGTTTTTGGTTCCCTGGCCACCACCCCATTTACCGAACTGGCATCCCCCCCCCAGGAGTCCTGGACCCGCATCCCCCACAACAGGGACCCCGGTTGGGAAGACCCCCGGATTTTCGGGGGGGCCCCCTCCTTTGGACCCGGACTTGCCCCCTTTGTCCCCCCCATTTCGGAACCAAACCCCTTCCCCTTCCAAGAAAACCGAACCCCCCCCCCCACCTTCTGGAATGCCCCCCGCACTTTTTTTAAGGGCCGGTGCCCGGTTTCGCTTTAGGGTAAATAAAAAAAATTTAATAAACCCCCCTTTGTCCCCACCCTCCCGCGGGGCCCGAGCCCCGCGACCCCCGCCCTCCGTGGTTTTTTCCCCCCCCAAAAAAAATTTTTTTTTTTTTTTTTTT



gi|110854250|gb|DY277017.1|DY277017 IC0AAA42CH04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence

GGGGTTAATTAAGTTTTTTGG
||||||||||| |||||| |.
CCCCAATTAATACAAAAATCT

EST sequence (targeted fragment marked with yellow):
AGAGTATATATCCATATATCTAATTAGAGTTTCGAAACAATATGTCAATGGCTATTGCGACTTCATCGGCATCAGTAGCAATGCGTTCTTGGATGATGATTATTGGCATTGCATTTGCTTTAGGATCAATTGTTCGTCTTGCTGAGGCTCGAGCTTTCTTCGTGTTTGGCGATTCACTCGTCGACAGCGGCAACAACAACTACCTCGCCACGACTGCCCGTGCAGACGCGCCGCCTTATGGGATTGATTTTCCTACTCACCGTCCCACAGGCCGTTTCTCCAATGGCTTCAACATCCCTGACATTATCAGTCAGAGAATTGGCCAATCGGAAGCCCCATTGCCATACTTGAGTCCAGAACTCAATGGACAGAGACTGCTCATTGGTGCCAACTTCGCTTCAGCGGGAATTGGAATTCTCAATGACACCGGCATCCAATTTGTAAACATAATTAGAATGTTCAGACAATTGGATTACTTCGCGGAGTACCAGCGTCGAGTGAGTGCTGTCATTGGAGCCCAGCAAGCTCGCCAACTTGTAAACCGAGCACTAGTACTCATCACTGTCGGTGGCAATGATTTTGTGAATAACTATTACTTGGTTCCGTACTCTGCAAGATCTCGCCAATTCACTTTGCCCAATTATGTCAAGTATATCATCTCTGAGTACCGAAAATTATTAATGAGGTTATACGAATTGGGAGCACGTAGGGTTCTTGTGACGGGTACCGGACCACTGGGTTGTGTTCCAGCAGAGCTGGCCCTGAGGGGTTCCAACGGTGGATGCTCAGCTGAACTGCAAAGAGCCACATCCTTGTACAACCCGCAACTCGAACAAATGCTACAAGAAATAAACAGAAAAATTGGTCAAACCGTCTTCATTGCCGCAAATACTCCACAGACGCACATGGATTTCATAAGCAACCCACCAGCATACGGATTTACAACAGCAAAAGTAGCATGCTGTGGGCAAGGACCAAACAACGGGCTGGGCCTCTGCCAGCACTGTTCAATTTATGCCCTAACCGGCAACTGGATGGCATTCGGGGATCCTTCCATTCCATCGAAAAAAGCAACAGAATTATCGTTGAAACAAATTTTTAGGGGTTCTAAAAACATAATTAACCCCAAATAAACCCCACCCCCTTTTAGGGGCCTGGATATTTTAGACACCCTTAAAAAATAACCACCTTTTTTTTTTGGAAAAAAATTTGAAAACTCCTCTCCCTTGGGGAAAAGTTTTTCTTTTTTTTTTTTTTTTTGGAAAAAGTGGTCGGGGGGAATATTAAAAAAAAAATATATTTTGTGGAAGAAAAAATATTTT



gi|110870467|gb|DY291194.1|DY291194 IC0AAA77CA06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence

GGGGTTAATTAAGTTTTTTGG
||||| |||||| |||||| |
CCCCATTTAATTAAAAAAAAC

EST sequence (targeted fragment marked with yellow):
CAGCAACTTCCCAGCATCGACCGTGGCTGCATACACCGCGCTACACACATCCGGTCACAATGGCCTCCATACTCCGCCGCTCCTGCTCGCTGGCCCCTGCGAGAAGGGCATTCTCGACTTCCACTCCCCGCCTCGCCAGTCTGCAGTGGGACAGGAACAACTCAGAGGTCCTCGCAGACACCGTCCCGGAATACCCCTACGGACCTCCTACGCTCTACAAGCAGTCTCGCCGCGGTCTCTATGGCGAGCAGCGCATCCGCTTCGGAAACAATGTTTCAACCAAGGGCAAGAACAAGAGCAGACGATCATGGCGCCCCAACATCATGAACAAGAGGCTGTTCTCAAAGTCCCTCAACAGGCACGTTCAAATCAGGGTCAGCTCAAGAGTGCTGAGGACGATTGATAAGCTCGGCGGTCTGGACGAATATCTGCTCGGAGAGAAGGAGACTAGGATCCGGGAGCTGGGAGAGAGTGGTTGGTGGCTGCGATGGGCTATCATGCAGACCAACGCAATCAAGAAGAGATTCGCTACAGAGCGCATAGCCCTGGGCTTGCCTGCCGATTCTGAGGAGCTGCGCGTCGAGGAAGAGGACGCGGAGGCTATCCTTGCCGCCTCCACTCCCGATGCTGAGATCGCGGAGCTCACACTCGAGGAGGATGCCGACCCCGAGCTCGAGCCCGAGTCTCTGGTCTCCGAAACTCTGGCTGAAGACGATGTTTTCCAGGTGGAGCAATCCGAGGACCTTCGACCACTCANGTTCCGTGTCGCCCGAAACAAGTACATTATGTTAACGGCGCAAGGCTGGCAGAGCTTGACGCCCTCTCCCGCCGCGCTGGCGGAGAAGGAGAAACTCGTAAAAGGATAAAATGAGACGAGCCCTGTCACAAGACCGCGCTCTATTACTCGCCACCAGAACCGAAAAGCTCAGGAAACATTTGAAGAAACAGGAAGTGGAGTACACAGTGGAAGTCCCCGCAAACGGCTCCAAAGCTACAAACGGCCAATGGTTCCATCAAAAACTAACCCATCCCTTGAAAACAGGGAACCGGCTGAATAACCAAGGAAGGAGTCCAAACCATTTTTGCCTAAAGCCTTGCCCAATTTTCAAACCCCAAGGCAAAAAAAATTAATTTACCCCTCTGGGGGGCCAGAAAAAAATTTTAAACCCCCCCCATCTCCCCCCGAAATGCAAGAAAATTTCCCAGGCCCCCCCCCACCCTTTTTTCTAAAAAAAAACCCCGGAGGGGAGAAAGAGG



gi|110857306|gb|DY274070.1|DY274070 IC0AAA35CG07RM2 CitNFL Citrus clementina cDNA 5', mRNA sequence

GGGGTTAATTAAGTTTTTTGG
||||||||||||.||||||
CCCCAATTAATTTAAAAAAAA

EST sequence (targeted fragment marked with yellow):
ACCAACCAAACCAAGTATCAATATAGCACTGGGGCCGGCCGGTACCAAGATACCAACCAATACCAAACCAACCAAATAAATCAACAAAAATACCGCTTCTTTGAGGATAACCTAACTAAACTTGCATCTATGGGTAAACAAATTTAAAAATTATACATTGAAATCCTTTTATATTGAGTATTTGTGTTATAAAAAGATATTATTTGAGAGACAACATGGTTACTGAAAATGAAGAAACAGAGTCCGCTCCTGAAGATATAATCCGGCTCCTAATAGCCACCGACGTGCACCTTGGGCACCAAGAAAATGACCCGGTGCGCGGCGACGACAGCTTCGTGACGTTCGAGGAGGTGCTGGCACTGGCCGAGGAACAGCGCGCGGACGCGGTGGTGCTCGGCGGCGACTTGTTCGACGCGGCGCGGCCGTCGCCCGGCGCGCTGCTGCGGGCCACGCGCGTGCTGCGGGAGCGGGTGCTGGGCGACCGGCCCGTGGCGCTGCGGCTGCTGTCCGACCCCATGCACGACTTCGGCCGCTGCGTCAACTACGAGGACCCCGACCTCAACGTAGGTTTGCCGGTCTTCACCATCCACGGCAATCACGATGATCCTGTAGGCCAGGGCTCTATCAGTTCTCTTGATATCTTATCCAGTATGGGCCTAGTCAATTACTTTGGACGGTGGACTGATTATTCTGAAGTTAAAATAAGTCCAGTGCTGCTACAGAAGGGTAGCACTCGTTTAGCCCTTTTTGGCCTTGGTCACCTAAAGGATCAACGTTTGTCACGACTTTTTAAAGAAGGCAAGGTTGAAATGCAGAAACCTAGTGGTGACGACTGGTTTAACCTGATGGTCCTGCACCAAAACAAAGCTGACCGAGGACCTGCCAACTACATCCAAGAAGATGTCCTCCCAAACTTTCTGGGATTGGGTGTCCGGGGTCATGAACATGATTGTCAAGTCCAGGAGGAGCAAAAAAACATAAAAAGTTCTTTGGAACACAGCCTGGAAATAACATTTGCCCCTCCCCGGGAACCGGGGGAACTTTTGCCAAAAATTGGGGCTCTGTTGCAAAAACAAAAAAAAAAATTTAATTAACCCCCATTCCATTAAGGAAAGGGGCTCCCTTTTAATTTTAATCTTATTTGAAAAATCGGAAAAAAAACCTTTGAAAAGAGGGCGCCCCAAAAAAAAAAAACAAATTCCAAAATATTTTAAAAAAAAAAGAGGGTTGGGAAAGAAAAAAAGGAGAGAAAAAAAAAAACACAGAAAAAGGGGTCCACCCCCTGCCCCCCCCCCCCAAAAATTTTTCTCTTTTTAAAGAGAGGAGATTTATCATATTTATATTTTTT



gi|110846459|gb|DY270602.1|DY270602 KN0AAP7YC08FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence

GGGGTTAATTAAGTTTTTTGG
||.|||||||||.||||||
CCTCAATTAATTTAAAAAAAA

EST sequence (targeted fragment marked with yellow):
GAGGAGAATGTCTCACAGGAAGTTTGAGCACCCAAGGCATGGTTCCCTTGGATTTCTTCCAAGGAAGCGAGCTGCTCGTCACAGAGGAAAGGTGAAGGCTTTTCCCAAGGATGACCCAAGCAAGCCTTGCAGGCTCACTGCCTTTTTGGGTTACAAGGCTGGGATGACCCACATTGTTAGGGATGTCAAGAAACCTGGATCTAACCTTCACAAGAAGGAGACCTGTGAGGCTGTTACCATTATTGAAACCCCTCCAATGATGGTGGTTGGAGTTGTGGGATATGTAAAAACACCTCGTGGTCTTCGCTCTTTGAACACTGTATGGGCTCAGCATCTTAGTGAGGAGGTGAAAAGAAGGTTCTACAAGAACTGGTGCAAATCCAAAAAGAAGGCTTTCACAAAATACTCAAAGCAGTATGAAACAGATGAAGGGAAGAAATGTATCCCAGCTCAGCTGGAGAAAATCAAGAAGTATGCTTCTGTTGTTCGTGTTCTTGCTCACACTAAAATAAGGAAAAGGAGGGGTTAGAAACAAAAGAGGGCCCCCCTGAGGGAAATCCGGGTCGGTGGTGCCACCATTGCAAAAAAAATTAACTATGCTAATGTCTTCATTAAAAAAAAATTTCTTGTTGATGCTTTTTTCAAAAAGGAAAATATGATTCACTTCATCCGTGTCAAAAAAGGGAAAGGTTAGGAAGGGTTTTGCCCCCCGGTGGGGGGCTCCCCCCCCCCCCCCAACAAAACCAAAAAAGGTCCGGGGTAGAGGGGGTTTGTTGTGGGCGCGGGCCCCCCGCGTAGGTTTTCCTTCCGGTTTGCAGAAGGGGGGAGAAGGGGAACCCCCCCCCCCAAAAAAAAAAAAAAAAAGGGTTACCATCTGGGGGGGGGGGGGGAAAGGATCCCTCCCCGCGCATAATTAATTTTTAACGGAGGAGGAAAAAAAATCCCCCCCGGGGGGGGGCTCCCCCCCAATGGGATAGTAGAAAAAAATAAATTTAAAGAAAAGGGGGGGGGGGGTGGGAACCAAAAAAAAGGGGGGGGGCGCCCCCCCCCCTTCCCCCCTCTCCCAAAAACAAACTCCTTTTATATTCTTTCGGGAAGAAAAAAAAAAAAAAAAATTTAATTAACTCCCCCCTCCCCTGATTTGGGGGTGGGGGCCCGGCCCTCGCTCCCACCCGACAACAAAAAAAACAGAAAAAAACATACAGAAACACGAACCTCACTGAACGGAGACAGAGAGGAACATCTACAAATCACAC



gi|218819837|gb|FC905898.1|FC905898 IC0AAA63CD10FM1 IVIA1 Citrus clementina cDNA clone IC0AAA63CD10, mRNA sequence

GGGGTTAATTAAGTTTTTTGG
.|||||| ||| ||||||||.
TCCCAATAAATCCAAAAAACT

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAACAAAATATGTAGTATGAATTAAAAAAAACAAATAACTTTTTCGTAATCCTAAACAGAATGGCAAAAATTGCATTCTCAAAAAACCTAAATAACCCTCTAAAACTAGTGCATAACCCTTCAACCAAAACCGCCGTTGCCCCCCCCAACCCCCACTTCACATTTAAGTATAAAAACCCTACCCTTTACTCCCCCCATAAAAAACCCCGTCCCTGTATCAAAACTGTTATTACAAGCTCATAATATATAACCTACCAATACAAAAACGGCACTGGAAAAATAATGGTCTGACCAATTGCCTTAAGCAACAAATAAAATGCAACCCCGAGGACTCAAACCAACCATTGCTTTACTACAAAATACCGTCCTTAAACCTCCCCCCAGCAAAAGGAAAACACACTTTCCTATAAAAACAAGTTAAAACTAGCACACACTATAGTGCCCGTGCCCCCATGGCAGTTGGAGGCATTTGTCCCACACCCCCCCCCCTGTGGTATGAAAACTGCCCCTTACTAACAAATGCTAACAAACAAGCTCCCAAAGCCTAATATTTTGGGTCCATTACCCTCTAGTCTTAACTCTCTTCATACCAAGGCTGTTATGGAAGGGGGACACTGAACCCGACATTGGAAAACC



gi|110881518|gb|DY304589.1|DY304589 KN0AAQ9YC03RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence

GGGGTTAATTAAGTTTTTTGG
|..|||||||||| |.|||..
CTTCAATTAATTCTAGAAATT

EST sequence (targeted fragment marked with yellow):
AAAATATCAGAAAAGCCGCAAAAGAATGGCGTGTCTAAGCCTAACAGCAGCCACCAGAATATCAAAGACGCCGACGATCTCTTCAAAAAGCCAATTCCCAACAAAGTTCAATGAACGCTTACAATTCATATCAATTAAACCAAAAAATTCAGTCTTGCAAAAAAGCGGATCGCATGAAACAGCGATACGAGCTTCGAACCCAAGCGCGCCCGCTGGCTCATCACCTGGCCTCTACTCCGCCCACCAGTTCGACCTCACGGCTAAAAACGTCGACCTTGTTCTCGAAGACGTGCGGCCTTATTTGATCGCCGATGGAGGAAACATCGACGTTGTTTCCGTTGAAGACGGCGTCGTCTCTGTCAAGCTCCAAGGTGAATAAACTCCATGAAATTTTTGAACTTGTTTGCCTCTGCGTTTGCATTGAATGAAGAATATAGTTGTTATTAGCATTCTACCGAGAATTCAAGACATCTAAAATCATTCATTTTTTTTTTTGGAGTTATTAGAGAAAACTTATTTTTTTGGTGTTGGAATTGAGTGAAATATCTTGTGGATTAGTAGTATATTTCTATGAAACAAAGTTATTATGGTGGATTTTGTGAAGCTTGCTTGTGCATGTTAAGCGGCCTGAGTCCTCTCTCAACCCCAAAACCTAGCCCTAAGGGGTGAGGCACCACATTTGTGATAAGCATTTGGTGTAGTGGGAGTTAGTTTAAGTACAAAGGAAACCAGTCCGATCAATGTAAAAGCTTGAAAGGCTGGTGCACTGAAATTTAAAGATCTTAATTAACTTCTGTCGCTCTTTAAGGGGCAAGGGAAAAGAAGAAACAATCTGTTTCCTTTTACCATAAATGGGACATATTAGGGGGCTAAAAATACCCTTGCCCAACTGCTGATTGGTCTCCGGAGAATCACCTTTCCAACTCTCTGGAAAAACATTTGAGGGGT



gi|110852985|gb|DY274304.1|DY274304 IC0AAA36BC11RM2 CitNFL Citrus clementina cDNA 5', mRNA sequence

GGGGTTAATTAAGTTTTTTGG
|.||||||||||.||||||
CTCCAATTAATTTAAAAAAGA

EST sequence (targeted fragment marked with yellow):
CCAAGCTATCAGCATATTTTCGCAACGGCTAAATCAGAACCAAATACAGTGATAGTAAGCGAGTGTGAGAATTGTTGCAAATGGCTGACACGGCACCGAGCCGATCCCGAGACCTAGACAAGCTCTTACTCCGAGCCGGCAATCTCGTGGGCCCCACTTTCGAACCCGGCGCAGAATTGAGAGATGACTTACAAGAATATGCGCGAATTTTGGTTGTTGGAGCCGGTGGATTGGGCTGCGAATTGTTGAAAGACTTAGCTTTATCGGGTTTTAAAAACCTAGAGGTCATTGATATGGACCGTATCGAAGTTTCGAATCTCAATCGCCAGTTTCTTTTCAGGATGGAAGATGTTGGTAAGCCAAAGGCAGAGGTGGCAGCAAAGCGTGTCATGGAGAGAGTTAGTGGTGTAAATATTGTCCCACATTTTTGCCGAATTGAGGATAAAGACATTTCATTTTACAATGATTTTAATATCATTGTCCTTGGTCTCGATTCCATCGAGGCTCGGAGCTATATAAATGCTGTAGCATGTAGTTTTCTTGAATATGAGACTGATGACAAGCCACGAGAAGAAACAATCAAACCCATGGTAGATGGGGGTACTGAAGGTTTTAAGGGTCATGCAAGGGTTATTATACCAGGAGTCACACCGTGCTTTGAGTGTACCATCTGGCTTTTCCCCCCTCAAGTGAAGTTTCCTTTATGCACTCTTGCGGAAACCCCTAGAACAGCTGCTCATTGTATTGAATATGCCCATTTAATCAAGTGGGATGAGGTGCACAGTGGAAAGTCTTTTGATCCAGATGACCCGGAACATATGCAGTGGGTCTATTCCGAGGCCGTCAAGAGAGCTGAGCTTTTTGGCATTCCTGGAGTTACATATTCTCTGACTCAGGGTGGTGTGGAAAAACTCATACCAGCTATTGCTTCACCAATGCAATTATATCAGCCACATGTGCTCCTGAAACATTGAAGAATGGTTCCAGGAGCCGCAAACCCCTATCGAATTATCTAACTTAAAATGGGTGGTGCCGGGTCTCCACTTAAAAGTTTACTGAATTTCTTGAAGGAAAAAGGACTGGCTTTGGATGGGGGTCCCGGGGGTCTTTTTGGATTTGGAACCCTTCAATTTACTCTAGAAAAAATTTAATTAACCTCTCTTGAAAAAAACCCCCTAAACCGGCCATTTAACAAAAAACAAAGGGGTCCCCAAATCCACGGGGGGGAAAAAAATCTGTGTTACATGGGCGGGGCCCCCCCCTTCCCCGTTTTTTCGGGGGAAAGAAAAGAAAGAGAGAACCGCCAAATACTACAAAC



gi|110869245|gb|DY288663.1|DY288663 IC0AAA70BA08RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence

GGGGTTAATTAAGTTTTTTGG
||||..||||| |||||||||
CCCCGGTTAATCCAAAAAACC

EST sequence (targeted fragment marked with yellow):
CCTTGGCTCCGGTGGATTTGGTCACGTGTTTAAGGGATACATAGATGATGGGTCGATTACAGTTGCGGTTAAACGTTTAAATACGTCATCCATGCCAGGAGCCCGAGAGTTTCGGACAGAGATTGAGATGATCTCCGAGCTTCCCCACCTTCATATCGTGTCTTTACTCGGCTTCTGTGATGAACATGGCGAGATGATTCTTGTTTACGAGTTCATGCCGCGTGGAAACCTCAGAGACCATCTCTATAACTCGCAGAAGCAGAATCAGAACCAGAACCAGAACCAGAACTCTCCTCTGACATGGAAACGCCGCCTGGAAATCAGTATTGGGGCTGCACGGGGACTGCATTACCTCCATGCAGGCGCAAAACACACGATCATTCACCGGGACGTCAAGTCAACGAACATATTACTGGACGAGAATTGGGCGGCCAAGATTTCAGATTTTGGCCTGTCAAGGATGGGCCCCTCGGGCATGTCTCAAAGCCACGTCAGCACCGTCGTGAAGGGAAGCTTCGGTTATGTCGACCCGGAGTACATCCGCAGGCAGCAGCTCACGGAAAAGTCTGACGTGTACTCATTCGGTGTGGTGTTATTAGAAGTTTTATGTGGGAGGCCACCTATGATCAACGGTGCCGTACGGAAAGAGGAAGTGAGTTTGGTGTTGTGGGCCCGGGTCTCTCGAGCGAGGGGAACCGTTGATCAAATCGTGGACCCACGTTTAAGGGGAAAGATTGCGCCAGTCTGTTTGAACAAGTTTGTGGAGATAGCTGGGAGTTGTACGGACGAGGAGGGATTCAGACGGTCAACGATGGGTGACGTGGCGTGNGGCCTTGAGTTTGCATTACAGCTGCAGGAGGCGGCTGAGAAGAGTGATCAGGGAAGGCCACTCGTGCCACGTGGAGAGGTGATCACTTTCTCTACGACGACTGATAGTGATGAGCCGTTTAGTCGGTCCAGTGGACCAGTGTCCGAATCCGAAGAGCAACACAACCAGTAGTGGCGCTGATGGTGAAGAGAATAAGATTAAGATTCCAAAAATGTTTTCCCGGAAAATATGGACCCCAAGGGGAAGGGTAGTACTGCCCAAGGGAGGGCCAACCATTGGACCGCCCCGGCCTTTGGGTTAAACCTAAAAGTTTCCCTGTGGGTTTAAATAAAGGGGGCCCCCTTCCCTTCCCCTTTTTCCAAAAAACCTAATTGGCCCCCCCCTCTTCCCAAATTTTCCCTCCTAAAAAACCCCCCCTTTTTTTAATAATTTTTTTTCAAATTTTTCTTCCGCCCCCTCTTTAATTTTTATAAAAATATTCAA



gi|218834746|gb|FC873258.1|FC873258 KN0AAI2DH08FM1 AbsDev Citrus clementina cDNA clone KN0AAI2DH08, mRNA sequence

GGGGTTAATTAAGTTTTTTGG
...|||||||||. .||||||
TTTCAATTAATTTCGAAAACC

EST sequence (targeted fragment marked with yellow):
TATTTTTTATGATTGGCAGTTGCGGGAAAAAGAAACAGAACTGAGTGGGCAGACACTGAACATATCCCATCAGCACCCAACAACAGTGCGATCCAAAAGCTTTAATTAACTTTCAAAAATTAACGTTATTAATTTGATGGAGGGGTTGGTGAGATCTCAAATCTCTCCAATTGGTGCTCATTACAAACAACAACACTCTGTTTTTATTCCGAAATTTTCATTGAAATTGAGGACAAATTTATGTAGAGCTCGAGTTGGGATGATGAAGCATTCTAAATCATTCAATTCCGTTGCTGCTTCAGTGCAACCATTAGAAGCCTCAGCATTGGGCCGTTCTGAGAACACACTGCCCTCCAAAGAGGTTCTTCAGCTGTGGAGAACTGCTGATGCGGTGTGCTTCGATGTTGATAGCACGGTATGTGTAGATGAGGGCATTGATGAACTTGCGGAATTTTGTGGAGCTGGAAAGGCTGTTGCGGAATGGACAGCCAGGGCAATGGGGGGGTCTGTTCCGTTCGAGGAGGCCTTGGCTGCCAGACTTTCCTTGTTCAAACCTTCATTGTCCCAAGTCCAGGATTTTCTTGAGAAGAGACCCCCTAGGCTCTCACCTGGCATAGATGAGTTGGTCAAGAAGCTGAAGGCTAACAATAAGAATGTTTATCTGATCTCTGGGGGCTTCCGTCATATGATCAATCCTATTGCATCAGTCCTCGGGATTCCTCCTGAAAATATCTTTGCCAACCAACTGCTGTTCAAGAGTTCTGGGGAGTTTCTGGGTTTTGATGCCAATGAAACTACTTCAAGGAGTGAAGGAAAAGCCGCTG