| mature miRNA: GGGTCCACATGTCAGTGAGCA species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|86597931|gb|CI276717.1|CI276717 CI276717 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): CATGATCTATGGTATTAATCATATGGTAGAAAGATGCGCATGCATGTCTTAGGGATTGGGATCCTCTNGACGTGAAGTCAGAGAGACGTGGTGACTGACATGTGAACCCCACCACTCGCGGACCCACTTGTTAGTGACCATGTCACGGAGCAGTTCACGTCAGAGGATCCAGTTCCGTCTTACAGACACTCAAAAAAAAAACTAAGCCCGTTTAACAAGCTGAGCACGGAGCGGCTTTGCCATCACAGTGGTGAACTCATTCTTCTCGGTCAAGTCCACCTCGTCGCCGGCCACCTCCTTCCACTCGAACTCCTTCACCAAATTCGCCACGAAATACTCCAGGTGTAGCATGGCAACGCCGAGCCCGGCACAGATCCTCCTCCCGACGCCGAACGGCATCATCCGGACCTCCCGGCTGCCCGTCACGTCCACTCCCTCGCCGTCGCCGCCGGCGAGGAACCGCTCAGGGATGAACTCCATCGGCTTCTCCCACTCCCTCTCGTCCCTTCCCATCTCGGCCACCATGAAGTTCACCGTCGCGCCCTTGGGGATGAGGTACCCGCCGACCTCGACGTCCTCCGCCGCCTTGTGCGGCAGCACGAAGTGGGCCGGCGGGTGCTTGCGGAGGCCCTCGAGGATGACGGCCTTCAGGTACGGCATGTCGTGGGTGTCCTCCTCGGTGATCTCGTCGTCGCTGGTC | |||||||||
gi|88232581|gb|CI232430.1|CI232430 CI232430 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): TGCTGGAAATGTATGTAATTGTTGTATACCCGTATACAAACTTGTATACCGCCGTCGCCGGAGGGGAAGGAGAAAAAGAGAGAGAGAAAAAAAAACAGAGACATCAGGGACTGTTACATCGATGTACAATTCTTCCTTTACCACGACGAGGTGACCTATAGAGATAAAGTTACCCGGACTCATTTTCTCTACCACCCCCTCTGCTTCCTCGGGTTAAGGTGAGATCAGGGAGGGCCCTTATTACACAGAGAAATCAATAAATAATGGAATGGCACGGGAGAATTACAAGGTGAAGGAGAGGGATGCAAATCCACTGCTGTACTGGTGTCACTGGCATGTGGGTCCCACATATTCCGGGCCCACATGTCATTGGCACTTACCGCACATGCATTACAGGAGAGATCCCAACTCGAAGGAGAGTGGTTGCTGATTGCTGATGCATGCATGGTGTATGTGTAGGTGGTGGTGTAATGAGAGGATGCGATGGTGATGGCGATGCT | |||||||||
gi|86479237|gb|CI121870.1|CI121870 CI121870 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): TGCTGGAAATGTATGTAATTGTTGTATACCCGTATACAAACTTGTATACCGCCGTCGCCGGAGGGGAAGGAGAAAGGAGAGAGAGAGAAAAAAAAAACAGAGACATCAGGGACTGTTACATCGATGTACAATTCTTCCTTTACCACGACAAGGTGACCTATAGAGATAAAGTTACCCGGACTCATTTTCTCTACCACCCCCTCTGCTTCCTCGGGTTAAGGTGAGATCAGGGAGGGCTCTTATTACACAGAGAAATCAATAAATAATGGAATGGCACGGGAGAATTACAAGATGAAGGAGAGGGATGCAAATCTACTGCTGTACTGGTGTCACTGGCATGTGGGTCCCACCTATTCCGGGCCCACATGTCATTGGCACTTACCGCACATGCATTACAGGAGAGATCCCAACTCGAAGGAGAGTGGTTGCTGATTGCTGATGCATGCATGGTGTTTGTGTTGGTGGTGGTGTAGTGAGAGGATGCGATGGTGATGGCGATGCTTTGATTTTAAATCTTTGAACAAGTACGTACTTGGTGATGCATCGTTCG | |||||||||
gi|29680035|gb|CB676310.1|CB676310 OSJNEe12H19.f OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe12H19 5', mRNA sequence GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): GTCTGCGTTTTTTTTCTCCCTCCTCCTCCTCCTCCCCGACATGTGGGCCCCCACGGCCTCGCCGGCGGCTGCGGCGGGGAGGGCGGCGATCCCGTCGCTCCGGCGGTGGCCGGCGGCGGCCGCGGGGGTGCGGATCGTCGTCGCGGTGGCTCCTGTCAAGGCGAGGGCGCCGCGGCGGCTGCGGCTCTGCCTCGCGGTGCCGCCGCCCGCGTCCGAGATGGCCGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGTGGAGCAAGGCGGTGGAGCTGGACGCGGCGGCGAGGCGGGAGATGGCGATCCGGAGGCTGCTGGAGGAGGCGGGGACGGGGAGCAACAGGAGGGAGTTCGCCGTGTTCTAAACGGCCAGGGGGGACGCTCTCTTCACGCAGTCGTGGACCCCGGTCGCCGCCCCCGATCACGTCAAGGGC | |||||||||
gi|87019940|gb|CI299338.1|CI299338 CI299338 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): AAAAAATCAAAGCATCGCCATCACCATCGCATCCTCTCACTACACCACCACCAACACAAACACCATGCATGCATCAGCAATCAGCAACCACTCTCCTTCGAGTTGGGATCTCTCCTGTAATGCATGTGCGGTAAGTGCCAATGACATGTGGGCCCGGAATAGGTGGGACCCACATGCCAGTGACACCAGTACAGCAGTGGATTTGCATCCCTCTCCTTCACCTTGTAATTCTCCCGTGCCATTCCATTATTTATTGATTTCTCTGTGTAATAAGAGCCCTCCCTGATCTCACCTTAACCCGAGGAAGCAGAGGGGGTGGTAGAGAAAATGAGTCCGGGTAACTTTATCTCT | |||||||||
gi|88302020|gb|CI667866.1|CI667866 CI667866 Oryza sativa (japonica cultivar-group) leaf of seedling gamma-irradiated (9.5min), a GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): ATGGGGACGGTAGTGTGTGGGTGGGAGGAAACAGATCCCCTGACTTTGTGAAATCTGCAGTTGTGCCACTGACATGTGGGCCCCACTTTNTCGCGATGGCTCACATGTCAGTTCCACAACTGTAAAATGCAAACCGCACAAAGTCAGGGGAGTCTCTCGTTCGCGTGCGATGGGGTGTTGGTCTCTTAAGAGTTGAGAATGAGATGGTGTAGTGTNGATTTCATGCGGCTGCGTTGATGTTCCGTGTCGAGGAGTATGGCAAGACTTCCTTCGTCATGGTGTTGTTTTTATTTCCTTGTAACCCGTTTGGATTTTTACTCTGCTTGTTGAAATATAATTGGCAGCTTTTCTGCCTGTTTAGTTTTTTGAAAAAATGTTTGTTGGGTGAGTGGATAGGG | |||||||||
gi|66929789|gb|CX116637.1|CX116637 EI105G16 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): ATGACTGGATCGCTGCGGTCCGGTCGCACTCCTTCTACCCACGCGTCTGGCGCTGGGACCTTATGGTGTTGCAGTGACACGCCGTCGGTTTGTTCCACCACCTACCGCACGGCTCGTCCTTGCGACCCGCGACGGTAGATCCTCGTGACCGCCACGGTGTGGTGACCGTGGCTGTTCTCCTGTTGCGTGTCGCGACCGCCTGTGTGGTTGACGCGCGACGCATGATGCGGACCCCCGTACCGCCTGTGCGCGTGCCTACCCCGATACCGACGCATGCCACTGTGCCACCCTGGATCTCTGCACGTGACTCTGCACATTGACATGTGGACGACCTATCAGCACGACTTTGACGACTTGACTTGACTGACTCACTCTACCACATCTACTCGCCGTCGACATGACCATCACCACGATTAAATTCATATCACATCATCGCGTGACAACGGTGATACACTACTCATATAACACATTAAGATCGACGATTAAGTAGACGCAACACACACCTCCAACAACAATACCACTACACACAACACACCACACATCACACGTGAGCTGAGCCCTGCACTCATACGACTGTGACCTCTCGCGTGACTTTTAACATGATCGCGGCCAGCTAGCAAATCGCTGAGCAGCATCCATACAACCTACTCTGCATAATACAGATTGTCACACGCTACACACTCTCAACATATACCAACTTAGCGCCTATACCAGTATATATACCACACAGTGATCTGGTTAGCACTCTGGCTGCAGACACCTCCCATTGACGAGATATACCCGCAAACGCTTATCACATCATAGCCTTATCGCACAGATCCAACTCACAGCCCCATAATACACGACAAAGCCAGAGGCAGATCACCACCGCGTACAAAACTGTGCCCAAGCACACCCGACATCCGCACCCGCTTCCCCCACACGACGTATGGCAGCACAGACGATGAAATATGGCTCACATCGAGAACCCGCCGCCCCATAGCTACCAGTGGAAGCACATAAAAGACACAGAGATCGGAATCGATAGTCGAGTACACCGCCCAACACAGCTACCCCAGCACCACGCTATGAACAGGAAGCACGTACCTCCAACTAGACCAACTACTACGACACATAACCCGTCATCAACAGCACCAACCAGACACGCAGAACACACAGCAGCAAAGGCAACACAACAGAAGCCAACAAACGACCCCAATCAGGCCAACCGGCACGCAACCAAACCGCACGCCAAAGCGCACGGCCAGACAGCGCCACCACACAATCATCCGACCACGCCCCCTACACGCCC | |||||||||
gi|86594256|gb|CI251128.1|CI251128 CI251128 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): TTTTTTTTGTTGGCCTAATTTGTTAAGCCTCACGTATTATTTTTTCATGAATCTATGGTATTAATCATATGGTAGAAAGATGCGCATGCATGTCTTAGGGATTGGGATCCTCTGACGTGAAGCCAGAGAGACGTGGTGACTGACATGTGAACCCCACCACTCGCGGACCCACTTGTTAGTGACCATGTCACGGAGCAGTTCACGTCAGAGGATCCAGTTCCGTCTTACAGACACTCAAAAAAAAAAACTAAGCCCGTTTAACAAGCTGAGCACGGAGCGGCTTTGCCATCACAGTGGTGAACTCATTCTTCTCGGTCAAGTCCACCTCGTCGCCGGCCACCTCCTTCCACTCGAACTCCTTCACCAAATTCGCCACGAAATACTCCAGGTGTAGCATGGCAACGCCGAGCCCGGCACAGATCCTCCTCCCGACGCCGAACGGCATCATCCGGACCTCCCGGCTGCCCGTCACGTCCACTCCCTCGCCGTCGCCGCCGGCGAGGAACCGCTCAGGGATGAACTCCATCGGCTTCTCCCACTCCCTCTCGTCCCTTCCCATCTCGGCCACCATG | |||||||||
gi|88971888|gb|CI390473.1|CI390473 CI390473 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): GGAAAGAGGGCAAATGCTTCGCCTTTGTTTCGGCAGTAGTGTACGAAAGGAAAAACAAATGTGATGGGAGCCCAAATCTTCATTGTCAACCACAGTCATATTCACTCACCAATTAAGATCCCCTGCAGTATTACATGTATTCACTGACATGTGGATCTGAAGGGCTGTGGAACCCACATTTCAGTGAGTAGTACTTTTACGAACTGCATCCATTCACTCACAGGTACGATCACACTCACCTACACCCTCCGCTTCGAGAAAGAACTTTTGGAGATTGATATGGACAAAAGGATTTTTTTTTTGTTGGTACGGAGGGTGTACGCTGCTACACACCGTGAACGTACGTGTGAGGGTGTGAGTGAAGATCTCTCCACATTATCAAACTCACCGTACAACCCTAAAGCATCACAAGCCGACTCAGGATTAGGCAAACCAAGGACGA | |||||||||
gi|88435923|gb|CI514062.1|CI514062 CI514062 Oryza sativa (japonica cultivar-group) 2 nuclei stage pistil Oryza sativa Japonica G GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): CTTCATCAGATAGATTCATCATTCATTTATAATTTATAAATTTACCCCCATTCTTCTACGGGAAATTTAACTATTTGCCACTCTTGTGACATGTCAATTAACGATTTACCACACCTTGTCAATGACATGTGGGCCCTCATGTGTTTATGACACGTGGGCTTAGTGGCAAATCGTTAAGCACCANTCGTAAGAGTGGTAAATAGTTAAAAGCCCCTTCTTCTACAGACAGAAGAAGCACTTTCTTCTTGAGCTCTNATACAGCAACNAAATTTAGACAAAATAAAAGAATCCCAAATCTTCCCCCAAGTTCTTAAACCCCAAGCCGAAGCNATCTTCTCAAAACCCGGGNCACCGCCGCGCCGAGGAAGGGGGCGGCCAAGAGCACGGTGCCGNTCGCCGCG | |||||||||
gi|58679359|gb|CK068046.1|CK068046 70319rsicem_21424.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): GCACGAGGTGGGTGATTGGTTGGCCCGCCGCTCCGCCCGCCCCTCCGCTCCTCGTGGGCCCCTTCGGCCGCGGCCTGCCGCAGCCGCCGCTCCGCCGGCATGCTTCGGCCGACGCCGTCGTTGTCGGCATGCTGCAACGTGATGAGGAAGAAGAGTGAGAGCCAAGTGGGGAGAGGGAGATGACATGCGGGGCCCACGTGGGCCCCACCATTTTTTAACTGACATGTGGGCCCCATTATTTTTAGATTTTTTTTTGTGTGGCTGACATGTGGGCCCATGATTTTTATTATTTTTCCAATATATAATTGCCACGTCATCGCCGCGTCAATGCCACAGGGACGGAGGCCTAGTGAAACAAGCCACGTAGGCGCCACGTCAGCCAAAACCGCCTTCAAAACCGCTAAGGGACCTTGTACCGGTTTTGATAGTTCGAGGACCGGTTGTATCTGGTTTTGGGGTTTAAGGACGAGAATCGGATTCGGTGTAAAATTAAGGGACCTCAAATGAACTTATTACAGGAAGGAATAAGGGCAGGGTTGGGTTGGGCCATGTAAAATAAGGGTTACGATGGGCTGGACACTGTAGCTCAAAATGGGGTTCAGCCCATGGGCAGTAAAAAAGGGTCTCCTTTGTGGGAGAACCCACAGCG | |||||||||
gi|86513501|gb|CI156134.1|CI156134 CI156134 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): CGATGTACAATTCTTCCTTTACCACGACGAGGTGACCTATAGAGATAAAGTTACCCGGACTCATTTTCTCTACCACCCCCTCTGCTTCCTCGGGTTAAGGTGAGATCAGGGAGGGCTCTTATTACACAGAGAAATCAATAAATAATGGAATGGCACGGGAGAATTACAAGGTGAAGGAGAGGGATGCAAATCCACTGCTGTACTGGTGTCACTGGCATGTGGGCCCCACCTATTCCGGGCCCACATGTCATTGGCACTTACCGCACATGCATTACAGGAGAGATCCCAACTCGAAGGAGAGTGGTCGCTGATTGCTGATGCATGCATGGTGTTTGTGTTGGTGGTGGTGTAGTGAGAGGATGCGATGGTGATGGCGATGCTTTGATTTTTTTTCTTTGAACAAGTACGTACTTGGTGATGCATCGTTCGCGCGCCTATTGAACCATGGCGAGGAAGGTGCTCGTCGGAGTCGAGGTTGGCACCGCGGACGCCGGGGTTGTCGCCGGCGGAGGTGCGGTGTTGGCGCCGCCCGGGTTCGGCCTCTGGAACTGTATCCTGTACTGCATTTTGCCGTCGTCCTCGCCTTCCTCGCCGTCGTCGGTGTAGTCATCGCCCATGTCGTCACTGTCGGTCTCGTCCGTTGTGAACTCCCGGGGCGGCTGCTCGCTCAGCTCCCTCACAATGTCTTCTGGCTTCTTCA | |||||||||
gi|44679055|gb|CR292489.1|CR292489 CR292489 Oryza sativa library (Han B) Oryza sativa cDNA clone y726c07p3, mRNA sequence GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): AGCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTATACAAGGAAAATAATGGATAATGAAACTTATTGACTCTCTGTAATAATCTTCCACCGTTACAAATACTCCACCACCCAGCAAATCCAACAACACCAACATGTGTACATACGCATGACCGACTCGATCGGCGACGAGATCCAGAAAGAACTCAGAACCAGGGGGAGCCATGGACGGGGGTGACGACGGACTTGACGGCGAGGAACTTGTCGAGCGCGTGCATGCTGTCGTCCTTGCCGAACCCGCTCATCTTGCGGGCACCGAACGGGCAGCTCCTGTCCATGGCGAAGTAGCAGTTCACCCACAACAACCCTGGCCGGATCGAACTCGNCATCCGGTTCGCCACGTCGATGTCCCTCGTCACCAGCCCCGGCGCCAGCCCGTACCTCGTCCCGTTCGACCTCTCGATCGCCTCCTCCACCGTCCTGGACCCAAAATTAATCTCTCTTACCATTATAGTAGTTTCTTCGATAATAAACATTTGGAATTGATACGACATATCATGGTCAGATCCTCTGCGATCGAAGTCACGTAACTTTGTCACTTACATGTGGATCCGATGATACCTGGGATCCCAAGTTAGCGATCAAGGGATCGGATATTTGACTAAAGAGGATATCGGCCCGATATATAGGCGGGTACACTGGACTTCTCAGGCCCTGACGGGGCGGAGATCTCTCCCTGCGAGACCAGGCGGCCTACCTTGGGCAACAGGGGGCCAAATAACCCATTCAACGAGGGGACCCCGGGAAAAAGACC | |||||||||
gi|88197030|gb|CI196880.1|CI196880 CI196880 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): GCTCAAATTGCTGGAAATGTATGTAATTGTTGTATACCCGTATACAAACTTGTATACCGCCGTTGCCGGAGGGGAAGGAGAAAAAGAGAGAGAGAAAAAAAAACAGAGACATCAGGGACTGTTACATCGATGTACAATTCTTCCTTTACCACGACGAGGTGACCTATAGAGATAAAGTTACCCGGACTCATTTCCTCTACCACCCCCTCTGCTTCCTCGGGTTAAGGTGAGATCAGGGAGGGCTCTTATTACACAGAGAAATCAATAAATAATGGAATGGCACGGGAGAATTACAAGGTGAAGGAGAGGGATGCAAATCCACTGCTGTACTGGTGTCACTGGCATGTGGGTCCCACCTATTCCGGGCCCACATGTTATTGGCACTTACCGCACATGCATTACAGGAGAGATCCCAACTCGAAGGAGAGTGGTTGCTGATTGCTGATGCATGCATGGTGTTTGTGTTGGTGGTGGTGTAGTGAGAGGATGCGATGGTGATGGCGATGCTTTGATTTTTTTTCTTTGAACAAGTACGTACTTGGTGATGCATCGTTCGCGCGCCTATTGAACCATGGCGAGGAAGGTGCTCGTCGGAGTCGAGGTTGGCACCGCGGACGCCGGGGTTGTCGCCGGCGGAGGTGCGGTGTTGG | |||||||||
gi|86520807|gb|CI161013.1|CI161013 CI161013 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): TTTTTTTGTTACATCGCATGTACAATTCTTCCTTTACCACGACGAGGTGACCTATAGAGATAGAGAGTTACCCGGACTCATTTTCTCTACCACCCCCTCTGCTTCCTCGGGTTAAGGTGAGATCAGGGAGGGCTCTTATTACACAGAGAAATCAATAAATAATGGAATGGCACGGGAGAATTACAAGGTGAAGGGGAGGGATGCAAATCCACTGCTGTACTGGTGTCACTGGCATGTGGGTCCCACCTATTCCGGGCCCACATGTCATTGGCACTTACCGCACATGCATTACAGGAGAGATCCCAACTCGAAGGAGAGTGGTTGCTGATTGCTGATGCATGCATGGTGTTTGTGTTGGTGGTGGTGTAGTGAGAGGATGCGATGGTGATGGCGATGCTTTGATTTTTTTTCTTTGAACAAGTACGTACTTGGTGATGCATCGTTCGCGCGCCTATTGAACCATGGCGAGGAAGGTGCTCGTCGGAGTCGAGGTTGGCACC | |||||||||
gi|88230184|gb|CI230060.1|CI230060 CI230060 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): TTTTAATTGCTGGAAATGTATGTAATTGTTGTATACCCGTATACAAACTTGTATACCGCCGTCGCCGGAGGGGAAGGAGAAAAAGAGAGAGAGAAAAAAAAAACAGAGACATCAGGGACTGTTACATCGATGTACAATTCTTCCTTTACCACGACGAGCTGACCTATAGAGATAAAGTTACCCGGACTCATTTTCTCTACCACCCCCTCTGCTTCCTCGGGTTAAGGTGAGATCAGGGAGGGCTCTTATTACACAGAGAAATCAATAAATAATGGAATGGCACGGGGGAATTACAAGGTGAAGGAGAGGGATGCAAATCCACTGCTGTACCGGTGTCACTGGCATGTGGGTCCCACCTATTCCGGGCCCACATGTCATTGGCACTTACCGCACATGCATTACAGGAGAGATCCCAACTCGAAGGAGAGTGGTTGCTGATTGCTGATGCATGCATGGTGTTTGTGTTGGTGGTGGTGTAGTGAGAGGATGCGATGGTGATG | |||||||||
gi|88476450|gb|CI413721.1|CI413721 CI413721 Oryza sativa (japonica cultivar-group) leaf of seedling 50ppm CuSO4 for 3 days Oryza GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): AGACAAAAACAAGACACCTTCTGACCTCTGCTCCAAATTGCTGGAAATGTATGTAATTGTTGTATACCCGTATACAAACTTGTATACCGCCGTCGCCGGAGGGGAAGGAGAAAAAGAGAGAGAGAAAAAAAAAACAGAGACATCAGGGACTGTTACATCGATGTACAATTCTTCCTTTACCACGACGAGGTGACCTATAGAGATAAAGTTACCCGGACTCATTTTCTCTACCACCCCCTCTGCTTCCTCGGGTTAAGGTGAGATCAGGGAGGGCTCTTATTACACAGAGAAATCAATAAATAATGGAATGGCACGGGAGAATTACAAGGTGAAGGAGAGGGATGCAAATCCACTGCTGTACTGGTGTCACTGGCATGTGGGTCCCACCTATTCCGGGCCCACATGTCATTG | |||||||||
gi|88515065|gb|CI442719.1|CI442719 CI442719 Oryza sativa (japonica cultivar-group) leaf of seedling gamma-irradiated(45Gy), immi GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): AATAATTAACAGATGTTGAAAAGCCAGTGTCACCGACATGTGGGCCCCCCGGGCGTGCCTACGGTTTCACGGGAGCAACTACGAGGAACATCCTGGCGACACGCCACAGAACATCGAGCGCGGCGAGGCCCATGACGGCGTAGCGAGCTCGCCCCAGCGACAGGTGATGGTGGTGCTTTCTCAGCTCCTCCAGCGGCGGCAGCAGCGGGAGCTTCCCCCTGCCGCCGCCGTCGAGGCTGCAGCAGCAGAAAGCCCAGGAGTAGACCAGCACCCTGGCCTTCTCCAACAACTCTAGCTTCGTCTTCCTCCCCGCTTGCTCCTGGTACAGCGCCTCCAGCGCCGTGAAGTAAATGTACATCACGCACAGCCACAGCAGCTGCAGCCCGTCCGTCGTCGTCGTCGATGTAGGCCGCGGCGGCGCGTCGGGCTCCTCCTCCAGCG | |||||||||
gi|87027391|gb|CI270066.1|CI270066 CI270066 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTGCACAGTAACAACGTTTTATACCACTGCAAAAAAAACGGGTTAAAAGGAGACAAAATTCCCCACGGGCAAAGAAAGAAAAGAAACAAAAACAAGACACCTTCTGACCTCTGCTCCAAATTGCTGGAAACGTATGTAATTGTTGTATACCCGTATACAAACTTGTATACCGCCGTCGCCGGAGGGGAAGGAGAAAAAGAGAGAGAGAAAAAAAAAACAGAGACACCAGGGGACTGTTACATCGATGTACAATTCTTCCTTTACCACGACGAGGTGACCTATAGAGATAAAGTTACCCGGACTCATTTTCTCTACCACCCCCTCTGCTTCCTCGGGTTAAGGTGAGATCAGGGAGGGCTCTTATTACACAGAGAAATCAATAAATAATGGAATGGCACGGGAAGAATTACAAGGTGAAGGACAGGGATGCAAATCCACTGCTGTACTGGTGTCACTGGCATGTGGGTCCCACCTATTCCGGGCCCACATGTCATTGGCACTTACC | |||||||||
gi|88742853|gb|CI766361.1|CI766361 CI766361 Oryza sativa (japonica cultivar-group) root of seedling gamma-irradiated(45Gy), immi GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): GATATTCGTCTGCGTTTTTTTCTCCCTCCTCCTCCTCCTCCCCGACATGTGGGCCCCCACGGCCTCGCCGGCGGCTGCGGCGGGGAGGGCGGCGATCCCGTCGCTCCGGCGGTGGCCGGCGGCGGCCGCGGGGGTGCGGATCGTCGTCGCGGTGGCTCCTGTCAAGGCGAGGGCGCCGCGGCGGCTGCGGCTCTGCCTCGCGGTGCCGCCGCCCGCGTCCGAGATGGCCGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGTG | |||||||||
gi|29639593|gb|CB644602.1|CB644602 OSJNEb05O07.r OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb05O07 3', mRNA sequence GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): ACGCGGCGGGTTGTACATCGCAGCCACTAGCGGGAGGGAGGAGGAGTTTGGCGGCAGCATCGACATGGTTGCCTTGTTGCTAGGTTCGACACGTGACAAACGACTTGGATGACGACATGCGAGGTGCACTGTCGAAGGCCAGCTCACTTTAGACACCAATTTGGATGTCACAAATTCACAATGGAGCTAGTTGGCATCGAGGTCGATGCTATTGCATGGAGCTCACGCCGCCTTTGACTGCTCAGGGATGCTACCGGAGCATGCCACCGTTTTTGCCTTGATTCAGGGGTATCGTTGTGTGGCCGTTTATTCCTCCCGAGCTACCAATAAGGGCGAGCAACCTCCTCGCTTTGCCCATCCACGGATCCACCCACTGGTGTGCCGCCGCCCAACGGGCCTACTTGCCACCAGCGCCCTGGCCAAACCAGGGTGTTGTGGCGCTCGGCCACGCCAGCCCACGGGGACCCCTTTTTGTGCTGCCTTTCCTCTGTCGCTTTCCGCCACCGCGCCGGGGTTTGTTCTGGGCACGTGAGTGAGAAAAAGGTACACTAAAAAATAATCCAAGAAGAATAGAAGGGAACGAGGAGAAGAAGCAAGAAAGAAAGAAGAGAAGAGAAAGGAAAAAAAAGGTGGGACCCATTGTATTTTTTTTTATTTTTTTAACCATATAATCACTGACATGTGGATCCTACCGACTTTTTATG | |||||||||
gi|86481727|gb|CI124360.1|CI124360 CI124360 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTGACCTCTGGCTCCAAATTGCTGGAAATGTATGTAATTGTTGTATACCCGTATACAAACTTGTATACCGCCGTCGCCGGAGGGGAAGGAGAAAAAGAGAGAGAGAAAAAAAAAACAGAGACATCAGGGACTGTTACATCGATGTACAATTCTTCCTTTACCACGACGAGGTGACCTATAGAGATAAAGTTACCCGGACTCATTTTCTCTACCACCCCCTCTGCTTCCTCGGGTTAAGGTGAGATCAGGGAGGGCTCTTATTACACAGAGAAATCAATAAATAATGGAATGGCACGGGAGAATTACAAGGTGAAGGAAAGGGATGCAAATCCACTGCTGTACTGGTGTCACTGGCATGTGGGTCCCACCTATTCCGGGCCCACATGTCATTGGCACTTACCGCACATGCATTACAGGAGAGATCCCAACTCGAAGGAGAGTGGTTGCTGATTGCTGATGCATGCATGGTGTTTGTGTTGGTGGTGGTGTACTGAGAGGATGCGATGGTGA | |||||||||
gi|86505052|gb|CI147685.1|CI147685 CI147685 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTCCTGAATCTATGGTATTAATCATATGGTAGAAAGATGCGCATGGAGTGTCTTAGGGATTGGGATCCTCTGACGTGAAGTCAGAGAGACGTGGTGACTGACATGTGAACCCCACCACTCGCGGACCCACTTGGTTAGTGACCATGTCACGGAGCAGTTCACGTCAGAGGATCCAGTTCCGTCTTACAGACACTCAAAAAAAAAACTAAGCCCGTTTAACAAGCTGAGCACGGAGCGGCTTTGCCATCACAGTGGTGAACTCATTCTTCTCGGTCAAGTCCACCTCGTCGCCGGCCACCTCCTTCCACTCGAACTCCTTCACCAAATTCGCCACGAAATACTCCAGGTGTAGCATGGCAACGCCGAGCCCGGCACAGATCCTCCTCCCGACGCCGAACGGCATCATCCGGACCTCCCGGCTGCCCGTCACGTCCACTCCCTCGCCGTCGCCGCCGGCGAGGAACCGCTCAGGGATGAACTCCATCGGNTTCTCCCACTCCCTCTCGTCCCTTCCCATCTCGGNCACCATGAAGTTCACCGTCGCGCCCTTG | |||||||||
gi|88572658|gb|CI664229.1|CI664229 CI664229 Oryza sativa (japonica cultivar-group) leaf of seedling gamma-irradiated (9.5min), a GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): ATGGGGACGGTAGTGTGTGGGTGGGAGGAAACAGATCCCCTGACTTTGTGAAATCTGCAGTTGTGCCACTGACATGTGGGCCCCACTTTTTCGCGATGGCTCACATGTCAGTTCCACAACTGTAAAATGCAAACCGCACAAAGTCAGGGGAGTCTCTCGTTCGCGTGCGATGGGGTGTTGGTCTCTTAAGAGTTGAGAATGAGATGGTGTAGTGTTGATTTCATGCGGCTGCGTTGATGTTCCGTGTCGAGGAGTATGGCAAGACTTCCTTCGTCATGGTGTTGTTTTTATTTTCTTGTAACCCGTTTGGATTTTTACTCTGCTTGTTGAAATATAATTGGCAGCTTTTCTGCCTGTTTAGTTTTTTGAAAAAATGTTTGTTGGGTGAGTGGATAGGGACAATGCTGAGGATATGAG | |||||||||
gi|86437810|gb|CI119730.1|CI119730 CI119730 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): GCTGGAAATGTATGTAATTGTGTATACCCGTATACAAACTTGTATACCGCCGTCGCCGGAGGGGAAGGAGAAAAAGAGAGAGAGAAAAAAAAACAGAGACATCAGGGACTGTTACATCGATGTACAATTCTTCCTTTACCACGACGAGGTGACCTATAGAGATAAAGTTACCCGGACTCATTTTCTCTACCACCCCCTCTGCTTCCTCGGGTTAAGGTGAGATCAGGGAGGGCTCTTATTACACAGAGAAATCAATAAATAATGGAATGGCACGGGAGAATTACAAGGTGAAGGAGAGGGATGCAAATCCACTGCTGTACTGGTGTCACTGGCATGTGGGTCCCACCTATTCCGGGCCCACATGTCATTGACACTTACCGCACATGCATTACAGGAGAGATCCCAACTCGAAGGAGAGTGGTTGCTGATTGCTGATGCATGCATGGTGTTTGTGTTGGTGGTGGTGTAGTGAGAGGATGCGATGGTGATGGCGATGCTTTGATTTTTTTTTCTTTGAACAAGTACGTACTTGGTGATGCATCGTTCGCGCGCCTATTGAACCATGGCGAGGAAGGTGCTCGTCGGAGTCGAGGTTGGCACCGCGGACGCCGGGGTTGTCGCCGGCGGAGGTGCGGTGTTGGCGCCGCCCGGGTTCGGCCTCTGGAACTGTATCCTGTACTGCATTTTGCCGTCGTCCTCG | |||||||||
gi|86521533|gb|CI161739.1|CI161739 CI161739 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): TTTTTTTTGCTCCAAATTGCTGGAAATGTATGTAATTGTTGTATACCCGTATACAAACTTGGTATACCGCCGTCGCCGGAGGGGAAGGAGAAAAAGAGAGAGAGAAAAAAAAAACAGAGACATCAGGGACTGTTACATCGATGTACAATTCTTCCTTTACCACGACGAGGTGACCTATAGAGATAAAGTTACCCGGACTCATTTTCTCTACCACCCCCTCTGCTTCCTCGGGTTAAGGTGAGATCAGGGAGGGCTCTTATTACACAGAGAAATCAATAAATAACGGAATGGCACGGGAGAATTACAAGGTGAAGGAGAGGGATGCAAATCCACTGCTGTACTGGTGCCACTGGCATGTGGGTCCCACCTATTCCGGGCCCACATGTCATTGGCACTTACCGCACATGCATTACAGGAGAGATCCCAACTCGAAGGGAGAGTGGTTGCTGATTGCTGATGCATGCATGGTGTTTGTGTTGGTGGTGGTGTAGTGAGAGGATGCGATGGTGATGGCGATGCTTTGATTTTTTTCTTTGAACAAGTACGTACTTGGTGA | |||||||||
gi|86517318|gb|CI157524.1|CI157524 CI157524 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): TTTTCTGCTCCAAATTGCTGGAANGTATGTAATTGTTGTATACCCGTATACAAACTTGTATACCGCCGTCGCCGGAGGGGAAGGAGAAAAAGAGAGAGAGAAAAAAAAAACAGAGACATCAGGNACTGTTACATCGATGTACAATTCTTCCTTTACCACGACGAGGTGACCTATAGAGATAAAGTTACCCGGACTCATTTTCTCTACCACCCCCTCTGCTTCCTCGGGTTAAGGTGAGATCAGGGAGGGCTCTTATTACACAGAGAAATCAATAAATAATGGAATGGCACGGGAGAATTACAAGGTGAAGGAGAGGGATGCAAATCCACCGCTGTACTGGTGTCACTGGCATGTGGGTCCCACCTATTCCGGGCCCACATGTCATTGGCACTTACCGCACATGCATTACAGGAGAGATCCCAACTCGAAGGAGAGTGGTTGCTGATTGCTGATGCATGCATGGTGTTTGTGTTGGTGGTGGTGTAGTGAGAGGATGCGATGGTGATGGCGATGCTTTGATTTTTTTTCTTTGAACAAGTACGTACTTGGTGATGCATCGTTCGCGCGCCTATTGAACCATGGCGAGGAAGGTGCTCGTCGGAGTCGAGGTTGGCACCGCGGACGCCGGGGTTGTCGCCGGCGGAGGTGCG | |||||||||
gi|88486056|gb|CI423327.1|CI423327 CI423327 Oryza sativa (japonica cultivar-group) leaf of seedling gamma-irradiated(45Gy), immi GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): AATAATTAACAGATGTTGAAAAGCCAGTGTCACCGACATGTGGGCCCCCCGGGCGTGCCTACGGTTTCACGGGAGCAACTACGAGGAACATCCTGGCGACACGCCACAGAACATCGAGCGCGGGGAGGCCCATGACGGCGTAGCGAGCTCGCCCCAGCGACAGGTGATGGTGGTGCTTTCTCAGCTCCTCCAGCGGCGGCAGCAGCGGGAGCTTCCCCCTGCCGCCGCCGTCGAGGCTGCAGCAGCAGAAAGCCCAGGAGTAGACCAGCACCCTGGCCTTCTCCAAAAACTCTAGCTTCGTCTTCCTCCCCGCTTGCTCCTGGTACAGCGCCTCCAGCGCCGTGAAGTAGATGTACATCACGCACAGCCACAGCAGCTGGAGCCCGTCCGTCGTCGTCGTCGATGTAGGCCGNGGCGGCG | |||||||||
gi|117218240|gb|CT851912.1|CT851912 CT851912 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): GACGTGAATCGGAGAAGGCGAAGCTTCCATTCTCCATATTCGTCTGCGTTTTTTTTCTCCCTCCTCCTCCTCCTCCCCGACATGTGGGCCCCCACGGCCTCGCCGGCGGCTGCGGCGGGGAGGGCGGCGATCCCGTCGCTCCGGCGGTGGCCGGCGGCGGCCGCGGGGGTGCGGATCGTCGTCGCGGTGGCTCCTGTCAAGGCGAGGGCGCCGCGGCGGCTGCGGCTCTGCCTCGCGGTGCCGCCGCCCGCGCCCGAGATGGCCGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAG | |||||||||
gi|29663342|gb|CB659617.1|CB659617 OSJNEc16L24.r OSJNEc Oryza sativa Japonica Group cDNA clone OSJNEc16L24 3', mRNA sequence GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): CCTGTCAGTAAAAGGAAAGCAACAGAGTTAAAGTCACTGGGTAATAAGGCGGTCGAGAAAAAGGATTATCTTTCTGCAACAGGATTCTACAGTCAGGCAGTGGACCTTTACCCTGATGATGCAACCTTGTTCTCAAATAGAAGCCTTTGCTGGCATCACATGGGTGATGGACACAAGGCTTTGTTGGATGCTTATGAATGCAGGAAATTGCGGCCTGACTGGCTGAAGGCCTACTACCGACAGGGTGCTGCTCTGATGCTACTGAAGGACTATGAGAGTGCTTGCGAAACACTTTACGATGGATTCAAGTTGGATCCAGGGAACTCTGAGATGGAGGATGCATTACGGGAAGCTCTGGCGTCCTTGAAGGCATCTGCAAGCACGGAGGCTAGGTGAACAGCATGGGTGTTTGCAAGGTGGGCAAGGCGCCCTGGTCCTCTCCTACACGTTTTGTCCAAGGCGTCTCACTTTTTGCAAAGAGCCTCTGGTTCCCTGAGTCCACAGATGTTCTCACATTTTGCCTGGAGACTTCGATACCCAGAACCAGAATGGTTTATCTCCTTTTTATAATTGAAGCAAAGTAGCTAACCGGGGTGGTGACTGATGAACATCACGGTGATTCGTGTCTATAACTGCTGTTTGGGGTGGCAGTGTGTGCAATGCTGCATTGGGATGGCATAGTGGGGGTTTAACTATTTGCCACTTTTAGATTTGGCAAATAACTATTTGTCACTCATATCTCAATGACATGTGGATCCACATGTATCTATGACATGTGGGTCCAGTGGTAAAAAGTTAATTACACATCTAAATGTGGCAAAAAGTGGTTAAAT | |||||||||
gi|66915033|gb|CX101881.1|CX101881 RECm2856 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): GGAATCCGGGTCGACCACGCGTCGCCATATTCGTCTGCGTTTTTTTTCTCCCTCCTCCTCTCCTCCCCGACATGTGGGCCCCCACGGCCTCGCCGGCGGCTGCGGCGGGGAGGGCGGCGATCCCGTCGCTCCGGCGGTGGCCGGCGGCGGCCGCGGGGGTGCGGATCGTCGTCGCGGTGGCTCCTGTCAAGGCGAGGGCGCCGCGGCGGCTGCGGCTCTGCCTCGCGGTGCCGCCGCCCGCGTCCGAGATGGCCGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGTGGAGCAAGGCGGTGGAGCTGGACGCGGCGGCGAGGCGGGAGATGGCGATCCGGAGGCTGCAGGAGGAGGCGGGGACGGGGAGCAGCAGGAGGGAGTTCGCCGTGTTCGAGACGGCCACGGGGGACGCTCTCTTCACGCAGTCGTGGACCCCGGTCGCCGCCGCCGATCGCGTCAAGGGCATCGTTGTTCTGTTACATGGACTAAATGAGCATAGTGGGAGGTACAATCATTTTGCAAAGCTGTTAAATGATCATGGGCTTAAAGTTTATGCAATGGACTGGATTGGACATGGTGGAAGTGATGGGGTGCATGGCTATGTTTCATCGCTTGATCATGCTGTTGGTGACCTGAAAGAATTTCTAGAGGATGTTGTACTGGAGGAAAACTATGGTTTGCCATGTTTCTTATTTGGCCACTCCACAGGTGGAGCTATTGTTTTGAAGGCAGTCCTGGATCCTTGTGTTGAAGTTCATGTTGAAGGTGTGATCTTGACATCTCCGGCTATTCATGTNCAACCATCTCATCCAATTATCAAAGTTGTTGCACCTATCTTCTCTGTGGGTAGCTCCAAAATACCGAGATGCTGGTTGGCACAGGAGAGGACCTCCCTGTTTCCCGTGATCTGAGGGCTTGAAGATTAGTATGCGATCCCGTGGGTTACCGGACCCTCCGAGTCCAAACGGCCGTGAGAGCCTGGGAGCTGCCCTATTGGCAAGACACTTACGCGAGTACCGGCCCTTCTTCAGGTCTTGCATGGCCCCCTGACCACATACTGCCCCGAGACATTTCGACTATCCGTTTCCGCCGCCATACCTTAACCGCAGGA | |||||||||
gi|86518265|gb|CI158471.1|CI158471 CI158471 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): GCTGGAAATGTATGTAATTGTTGTATACCCGTATCAAACTTGTATACCGCCGTCGCCGGAGGGGAAGGAGAAAAAGAGAGAGAGAAAAAAAAAACAGAGACATCAGGCACTGTTACATCGATGTACAATTCTTCCTTTACCACGACGAGGTGACCTATAGAGATAAAGTTACCCGGACTCATTTTCTCTACCACCCCCTCTGCTTCCTCGGGTTAAGGTGAGATCAGGGAGGGCTCTTATTACACAGAGAAATCAATAAATAATGGAATGGCACGGGAGAATTACAAGGTGAAGGAGAGGGATACAAATCCACTGCTGTACTGGTGTCACTGGCATGTGGGTCCCACCTATTCCGGGCCCACATGTCATTGGCACTTACCGCACATGCATTACAGGAGAGATCCCAACTCGAAGGAGAGTGGTTGCTGATTGCTGATGCATGCATGGTGTTTGTGTTGGTGGTGGTGTAGTGAGAGGATGCGATGGTGATAGCGATGCTTTGATTTTTTTTCTTTGAACAAGTACGTACTTGGTGATGCATCGTTCGCGCGCCTATTGAACCATGGCGAGGAAGGTGCTCGTCGGAGTCGAGGTTGGCACCGCGGACGCCGGGGTTGTCGCCGGCGGAGGTGCGGTGTTGGCGCCGCCCGGGTTCGGCCTCTGGAACTGTATCCTGTACTGCATTTTGCCGTCGTCCTCG | |||||||||
gi|109712951|gb|CI105559.1|CI105559 CI105559 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage Oryza sativa Ja GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): AACAAAATCGTATCACATTCTACATTGGTAATAATTAACAGATGTTGAAAAGCCAGTGTCACCGACATGTGGGCCCCCCGGGCGTGCCTACGGTTTCACGGGAGCAACTACGAGGAACATCCTGGCGACACGCCACAGGACATCGAGCGCGGCGAGGCCCATGACGGCGTAGCGAGCTCGCCCCAGCGACAGGTGATGGTGGTGCTTTCTCAGCTCCTCCAGCGGCGGCAGCAGCGGGAGCTTCCCCCTGCCGCCGCCGTCGAGGCTGCAGCAGCAGAAAGCCCAGAAGTAGACCAGCACCCTAGCCTTCTCCAACAACTCTAGCTTCGTCTTCCTCCCCGCTTGCTCCTGGTACAGCGCCTCCAGCGCCGTGAAGTAGATGTACATCACGCACAGCCACAGCAGCTGCAGCCCGTCCGTCGTCGTCGTCGATGTAGGCCGCGGCGGCGC | |||||||||
gi|88851623|gb|CI674825.1|CI674825 CI674825 Oryza sativa (japonica cultivar-group) 3rd week immature panicle Oryza sativa Japoni GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): GATAGTTCCATACCCTCCCCGTTGCCTCGCCTAAACCCATCACCCCACGCCACCANCTCGCCACCGCCGCCGCCGCCGNCGCCGACGAAGACGACGATGAAGGTGGTGCGGAACCTCGACCTGCAGCGGTACATGGGGCGGTGGTACGAGATCGCGTGCTTCCCGTCGCGGTTCCAGCCCAGGGACGGCACCAACACGCGCGCCAACTACACCGCTCGCCGGCGACGGAGCCGTGCAAGGTGCTCACCGACACGTGGACCGACGGCCGCCCCGGCCACATCCAGGGCANCGCCTACCGCGC | |||||||||
gi|58611552|gb|CK039264.1|CK039264 36164rsiceg_5722.y1 Oryza sativa cv. 93-11 tillering whole plant cDNA library Oryza sativa cD GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): CAGATACAATGAAAAGCTATGGAGATCTTGCAGTTTTCTATTACCGCCTGCAGCATACAGAATTGGCATTAAAGTATGTGAATCGTGCCCTATATCTTTTGCACCTGACATGTGGACCCTCTCATCCTAATACTGCTGCAACTTATATTAATGTGGCAATGATGGAAGAAGGGCTGGGTAATGTTCATGTTGCACTTCGTTACCTTCATGAGGCTCTAAAATGCAACAAGAGGTTGCTTGGTGCTGATCACATACAGACTGCTGCTAGTTACCATGCTATTGCTATTGCTCTGTCTTTAATGGAAGCATACTCTTTAAGTGTCCAACATGAAAAAACCACTTTACGAATACTTCAAGCAAAGCTTGGGCCGGAAGATCTTCGTACACAGGATGCTGCTGCTTGGCTTGAATATTTCGAGTCCAAGGCACTAGAGCAGCAGGAAGCAGCACGTAAATGGTACTCCAAAGCCTGATGCTTCAATAGCAAGCAGAGGCCACCTGAGTGTATCAGATCTTCTGGATTATATCAATCCAGATGATGAACTCAAGGC | |||||||||
gi|88491525|gb|CI428797.1|CI428797 CI428797 Oryza sativa (japonica cultivar-group) leaf of seedling gamma-irradiated(45Gy), immi GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): AATAATTAACAGATGTTGAAAAGCCAGTGTCACCGACATGTGGGCCCCCCGGGCGTGCCTACGGTTTCACGGGAGCAACTANGAGGAACATCCTGGCGACACGCCACAGAACATCGAGCGCGGCGAGGCCCATGACGGNGTACCGAGCTCGCCCCACCGACAGGTGATGGTGGTGCTTTCTCACCTCCTCCAGCGGCGNGCGCNAGCGGGAGCTTCCCCCTGCCGCCGNCGTCGAGGCTGCACCAGCAGAAAGCCCAGGAGTAGACCATCACCCTGGCCTTCTCCAACAAATCTACCTTCGTCTCCCTCCCCGCTTGCTCCTGGTACAGCGCCTCCACCGCCGTGAAGTAGATGTACATCACG | |||||||||
gi|38475235|gb|CF959368.1|CF959368 1443rsiceb_1974.y1 Oryza sativa cv. PA64s leaf cDNA library Oryza sativa Indica Group cDNA 5' GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): GCACGAGGGGCTTGCATGATTGGCGCCGTGCACCCAACCTTCTGGCTGTCTCGCTTTTTCGCTGACATGTGGATCTCTTCCCGAAGGAAGAGGAGTATATTGAGTGGTTCAAAAAGGCAGGGTTCAAGGATGTCAAGCTCAAAAGGATTGGACCAAAATGGTACCGTGGTGTCCGAAGGCATGGCCTGATTATGGGATGCTCTGTGACGGGCGTCAAAAGAGAACATGGAGACTCCCCTTTGCAGCTTGGTCCAAAGGTTGAGGATGTCAGCAAACCTGTGAATCCTATCACCTTCCTCTTCCGCTTCCTCATGGGAACAATATGTGCTGCATACTATGTTCTGGTGCCTATCTACATGTGGATAAAGGACCAGATTGTGCCCAAAAGGCATGCCGATCTAAGGGAGATGAACTGAGCTGCAAGAGAGGATAGCCAATATCTGAATTTGGCTTCTCTATATTAGGCACTTTCTGTCAGTTCTGTATTTACTTCTGTTGTCCCT | |||||||||
gi|88223289|gb|CI223138.1|CI223138 CI223138 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s GGGTCCACATGTCAGTGA-GCA EST sequence (targeted fragment marked with yellow): TTTGAAAACATAATGATCATATATATTGCGCTGGTTGATGACCTAGCATACAAAGTATAAATCCGGACTCGGAAGTGGATCCTCTGACTTTATACATTTTGCAGTTGCGTCACTAACATGTGGACCCACTTTGCTATGGCTCATATATCAGTGACACAACTGCAAACTGCACAGAGAGAGATAGGAACATTAAGATATGGCACCAATCAGTTGGTTACCAGACAAGTTAAGACTTTTTAGGTTCAGCAACAGCTTGATGGATGCAGGTATCGGACCAGTTATACGATTATCAGGCACTTTCAATTCAATTAGGTTGGCGAGCTTGCTCATGTCGGCCGGGAGCTCACCGTCCAGCTGGTTGTTCTCCGCCGTGAAAACAAGCAGACCGATCGTTGTCCTCGGGATAGAGCCGGAGAACATGTTGTTCCCCATCTCAATGTGCTGGATATTGGACGATAGCACGGCTGGCAGGACTCCGGTGAAGTTGTTCGGTATCATTACAATTTCTAGCTCTGGGAGCAGCCATATCTTCTCCGGGAAG | |||||||||
gi|86513549|gb|CI156182.1|CI156182 CI156182 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): GCTGGAAATGTATGTAATTGTTGTATACCCGTATACAAACTTGTATACCGCCGTCGCCGGAGGGGAAGGAGAAAAAGAGAGAGAGAAAAAAAAACAGAGACATCAGGGACTGTTACATCGATGTACAATTCTTCCTTTACCACGACGAGGTGACCTATAGAGATAAAGTTACCCGGACTCATTTTCTCTACCACCCCCTCTGCTTCCTCGGGTTAAGGTGAGATCAGGGAGGGCTCTTATTACACAGAGAAATCAATAAATAATGGAATGGCACGGGAGAATTACAAGGTGAAGGAGAGGGATGCAAATCCACTGCTGTACTGGTGTCACTGGCATGTGGGTCCCACCTATTCCGGGCCCACATGTCATTGGCGCTTACCGCACATGCATTACAGGAGAGATCCCAACTCGAAGGAGAGTGGTTGCTGATTGCTGATGCATGCATGGTGTTTGTGTTGGTGGTGGTGTAGTGAGAGGATGCGATGGTGATGGCGATGCTTTGATTTTTTTTCTTTGAACAAGTACGTACTTGGTGATGCATCGTTCGCGCGCCTATTGAACCATGGCGAGGAAGGTGCTCGTCGGAGTCGAGGTTGGCACCGCGGACGCCGGGGTTGTCGCCGGCGGAGGTGCGGTGTTGGCGCCGCCCGGGTTCGGCCTCTGGAACTGTATCCTGTACTGCATTTTGCCGTCGTCCTCGCCTTCCTCGCCGTCGTCGGTGTAGTCATCCGCCATGTCGTCACTGTCGGT | |||||||||
gi|88443118|gb|CI546690.1|CI546690 CI546690 Oryza sativa (japonica cultivar-group) root of seedling 6ppm CdCl2 for 3 days Oryza GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): CATCAGATAGATTCATCATTCATTTATAATTTATAAATTTACCCCCATTCTTCTACGGGAAATTTAACTATTTGCCACTCTTGTGACATGTCAATTACCGATTTACCACACCTTGTCAATGACATGTGGGCCCTCATGTGTTTATGACACGTGGGCTTAGTGGCAAATCGTTAAGCACCACTCGTAAGAGTGGTAAATAGTTAAAAGCCCCTTCTTCTACAGACAGAAGAAGCACTTTCTTCTTGAGCTCTCATACAGCAACCAAATCTAGACAAAATCAAAGAATCCCCAAATCCTCCCCCCAAGTTCCTAAAGCCCCAAGCGAACGCCATCTTCTCAGAACCCGGCCACCGCCGCGCCGAGGAGGGNGGCGGCAACGAGCACGGCGCCGCT | |||||||||
gi|87010522|gb|CI283597.1|CI283597 CI283597 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): TATATGTGGGACCCACTTTATCATTCACACAAACAAAATTATAGGGCCCACTGACATGTGGACCCTACATGTCATCCTCTCTCTCTTCTTCCTCCCTCTCTTTCCCTTCTCTCTCTCCACTTCGGCCTTCTGCAAGAGGCGATGGCGGCAGCGGCAGCGACGGCGGCGGTGGCGCGAGGGTAGGCGCTGGAGGCACTGGAGCGGTGGCGGCGACGGACGGGGACCGGAGTGGCGGCGGCGCTTCGGGCTAGAGTTGGCGTGGATGGAGGCGGAGGCGGCGACAGAGGAGATGGCAGGCGGTCGAGGGCCGGAGCGACGGCGGGTCGGCGGAGAGCCTGGCGGCCGGTGGTGGCTAGCGGGGAGAGAGCTAGTGGCGAAGGCCGCCCCCATCTTCCTCCCTCCTCGCCGGGCTCCGCACGCACCTGCCCCGATCGGTGGAGCGGATTACGCGGTTGGGTCC | |||||||||
gi|58668611|gb|CK057297.1|CK057297 61182rsicek_4483.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): GCACGAGGGCATGCATCAGCAATCAGCAACCACTCTCCTTCGAGTTGGGATCTCTCCTGCAATGCATGTGCGGTAAGTGCCAATGACATGTGGGCCCGGAATAGGTGGGACCCACATGCCAGTGACACCAGTACAGCAGTGGATTTGCATCCCTCTCCTTCACCTTGTAATTCTCCCGTGCCATTCCATTATTTATTGATTTCTCTGTGTAATAAGAGCCCTCCCTGATCTCACCTTAACCCGAGGAAGCAGAGGGGGTGGTAGAGAAAATGAGTCCGGGTAACTTTATCTCTATAGGTCACCTCGTCGTGGTAAAGGAAGAATTGTACATCGATGTAACAGTCCCTGATGTCTCTGTTTTTTTTTTTCTCTCTCTCTTTTTCTCCTTCCCCTCCGGCGACGGCGGTATACAAGTTTGTATACGGGTATACAACAATTACATACATTTCCAGCAATTTGGAGCAGAGGTCAGAAGGTGTCTTGTTTTCGTTTCTTTTCTTTCTTTGCCGTGGGGAATTTNGTCTCCTTTTAACCCGTTTTTTTTGCAGTGGTATAAAACGTTGTTACTGTGCACATTGTGTGGTTACTCTTCGTATACTTTGCATTTTTGCT | |||||||||
gi|89183453|gb|CI046018.1|CI046018 CI046018 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): CTTTTTTTTTTTTTCATGAATCTATGGTATTAATCATATGGTAGAAAGATGCGCATGCATGTCTTAGGGATTGGGATCCTCTGACGTGAAGTCAGAGAGACGTGGTGACTGACATGTGAACCCCACCACTCGCGGACCCACTTGTTAGTGACCATGTCACGGAGCAGTTCACGTCAGAGGATCCAGTTCCGTCTTACAGACACTCAAAAAAAAAAAAAAAACTAAGCCCGTTTAACAAGCTGAGCACGGAGCGGCTTTGCCATCACAGTGGTGAACTCATTCTTCT | |||||||||
gi|29633660|gb|CB638669.1|CB638669 OSJNEa07D16.r OSJNEa Oryza sativa Japonica Group cDNA clone OSJNEa07D16 3', mRNA sequence GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): GAGCATGCCACCGTCTTCGCCTTGATTCAGGGCTATCGTCGTGTGGCCGTTTATTCCTCCCGAGCTACCAATAAGGGCGAGCAACTTCCTCGTTTTGCCCATCCACGGATCCACCCACTGTTGTGCCGCCGCCCAACGGGCTTATTTGCCACCAGCGCCTTGGCCAAACCAGGGCGTTGCGGCGTTGGGCCACGCCAGCCCACGGCGACCCCTTTTTGTGCTGCCTCTCCTCTGTGGTTTCCCGCCACCGCGCCGGGGTTTGTCTTGGGCACGTGAGCGAGAAAAAGGTACACTAAAAAATAATCCAAGAAGAATAGAAGGGAACGAGGAGAAGAAGCAAGAAAGAAAGAAGAGAAGAGAAAGGAAAAAAAAGGTGGGACCCATTGTATTTTTTTTTATTTTTTTAACCATATAATCACTGACATGTGGATCCTACCGACTTTTTATGATTGCAAGTGCCACATCAACAACATGAAAGATGATAACCCC | |||||||||
gi|88228999|gb|CI228875.1|CI228875 CI228875 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): TTTTTAAACAAAAACAAGACACCTTCTGACCTCTGCTCCAAATTGCTGGAAATGTATGTAATTGTTGTATACCCGTATACAAACTTGTATACCGCCGTCGCCGGAGGGGAAGGAGAAAAAGAGAGAGAGAAAAAAAAAACAGAGACATCAGGGACTGTTACATCGATGTACAATTCTTCCTTTACCACGACGAGGTGACCTATAGAGATAAAGTTACCCGGACTCATTTTCTCTACCACCCCCTCTGCTTCCTCGGGTTAAGGTGAGATCAGGGAGGGCTCTTATTACACAGAGAAATCAATAAATAATGGAATGGCACGGGAGAATTACAAGGTGAAGGAGAGGGATGCAAATCCACTGCTGTACTGGTGTCACTGGCATGTGGGTCCCACCTATTCCGGGCCCACATGTCGTTGGCACTTACCGCACATGCATTACAGGAGAGATCCCAACTCGAAGGAGAGTGGTTGCTGATTGCTGATGCATGCATGGTGTTTGTG | |||||||||
gi|112786157|gb|EE592176.1|EE592176 NEW_RNG0050-E11-T7 Rice mixture of leaf, root, panicle Oryza sativa Japonica Group cDNA, mRN GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): GGGGTTAAGCGTGGGGAATCAGTTTCATGCCGACGAGGGGGACACTAAAGAGTATAAAGTTCCTCGGACTCATTTTCTCTACCACCCCCTCTGCTTCCTCGGGTTAAGGTGATATCAGGGAGGGCTCTTATTACACAGAGAAATCAATAAATAATGGAATGGCACGGGAGAATTACAAGGTGAAGGAGAGGGATGCAAATCCACTGCTGTACTGGTGTCACTGGCATGTGGGTCCCACCTATTCCGGGCCCACATGTCATTGGCACTTACCGCACATGCATTACAGGAGAGATCCCAACTCGAAGGAGAGTGGTTGCTGATTGCTGATGCATGCATGGTGTTTGTGTTGGTGGTGGTGTAGTGAGAGGATGCGATGGTGATGGCGATGCTTTGATTTTTTTTTCTTTGAACAAGTACGTACTTGGTGATGCATCGTTCGCGCGCCTATTGGACCATGGCGAGGAAGGTGCTCGTCGGAGTCGAGGTTGGCACCGCGGACGCCGGGGTTGTCGCCGGCGGAGGTGCGGTGTTCGCGCCGCCCGGGTTCGGCCTCTGGAACTGTATCCTGTACTGCATTTTGCCGTCGTCCTCGCCTTCCTCGCCGTCGTCGGTGTAGTCATCGCCCATGTCGTCACCTCGTCG | |||||||||
gi|87020723|gb|CI267444.1|CI267444 CI267444 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTGGCCTAATTTGTTAAGCCTCACGTATTATTTTTTCATGAATCTATGGTATTAATCATATGGTAGAAAGATGCGCATGCATGTCTTAGGGATTGGGGTCCTCTGACGTGAAGTCAGAGAGACGTGGTGACTGACATGTGAACCCCACCACTCGCGGACCCACTTGTTAGTGACCATGTCACGGAGCAGTTCACGTCAGAGGATCCAGTTCCGTCTTACAGACACTCAAAAAAAAAAAAAAAAAAAAACTAAGCCCGTTTAACAAGCTGAGCACGGAGCGGCTTTGCCATCACAGTGGTGAACTCATTCTTCTCGGTCAAGTCCACCTCGTCGCCGGCCACCTCCTTCCACTCGAACTCCTTCACCAAATTCGCCACGAAATACTCCAGGTGTAGCATGGCAACGCCGAGCCCGGCACAGATCCTCCTCCCGACGCCGAACGGCATCATCCGGACCTCCCGGCTGCCCGTCACGTCCACTCCCTCGCCGTCGCCGCCGGCGAGGAACCGCTC | |||||||||
gi|88246960|gb|CI246809.1|CI246809 CI246809 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat GGGTCCACATGTCAGTGAGCA EST sequence (targeted fragment marked with yellow): TTTTGCACCAAATTGTGTTGGCCTAATTTGTTAAGCCTCACGTATTATTTTTTCATGAATCTATGGTATTAATCATATGGTAGAAAGATGCGCATGCATGTCTTAGGGATTGGGACCCTCTGACGTGAAGTCAGAGAGACGTGGTGACTGACATGTGAACCCCACCACTCGCGGACCCACTTGTTAGTGACCATGTCACGGAGCAGTTCACGTCAGAGGATCCAGTTCCGTCTTACAGACACTCAAAAAAAAAAAAAACTAAGCCCGTTTAACAAGCTGAGCACGGAGCGGCTTTGCCATCACAGTGGTGAACTCATTCTTCTCGGTCAAGTCCACCTCGTCGCCGGCCACCTCCTTCCACTCGAACTCCTTCACCAAATTCGCCACGAAATACTCCAGGTGTAGCATGGCAACGCCGAGCCCGGCACAGATCCTCCTCCCGACGCCGAACGGCATCATCCGGACCTCCCGGCTGCCCGTCACGTCCACTCCCTCGCCGTCGCCGCCGGCGAGGAACCGCTCAGGGATGAACTCCATCGGCTTCTCCCACTCCCTCTCGTCCCTTCCCATCTCGG | |||||||||