| mature miRNA: GGTATCGTGAGGTACCGGTAC species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|58600859|gb|CK011387.1|CK011387 30867sicef_0259.z1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica Gr GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTAAATAGTGAAGCTATGTCATCTCCATATAATTCCCCATGAAATATTGATAGGGTATATGTAGAGGATGAAGGAAGTGTTCGTATGGCTGGATCATCACTAGAATTCTGTTATTTGACCCTGATACTTACTATGAGGCCATGCTGATGAAGAACATAGCAATCTTACTTGCTCTTCTTAGAAGCCTCGTATAGGTAGCTCACGATAACTACGGCTGCAGCAACAGCTACCCCGACAGCACTCTGTGCGAGTACAGCACCAGTTGAAAGATCAGATTTCGTAGATGCAGGGCCGCTGCTCCGTGGAGTGAAGCCAAGTTCAGAAAGCTTCTTGTGCGATTCAGCGTAGTCCTTGAAGAAGGTGTCTTCATCCCTGGCATAAAGATCCACATAGCGTCTAAATGAAGGATCTTCCAACAATGCCTTGTCAGTTGGGAGCTTCAGAAGCCCCTCAGATTCCCCCTTCAGTAGCTCAAGAAAGTACGAATTGTCAAACTTCAGAGGCTCCTGAGTCCATGCGCCTTCAAATCCAGACCTTTCAGGATGTGCCCTTCCCAGAGTGTGACCCCCAGATAAA | |||||||||
gi|88537506|gb|CI464457.1|CI464457 CI464457 Oryza sativa (japonica cultivar-group) whole body 3mM SA(salicylic acid) for 1day Or GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): AGTCCACAGTGCTTTTAAATAGTGAAGCTATGTCATCTCCATATAATTCCCCATGAAATATTGATAGGGTATATGTAGACATGAAGGAAGTGTTCGTATGGCTGGATCATCACTACAATTCTGTTATCTGACCCTGATACTTACTATGAGGCCATGCTGATGACGAACATAGCAATCTTACTTGCTCTTCTTACAAGCCTCGTATAGGTAGCTCACGATAACTACAGCTGCCGCACCAGCTACCCCGACAGCACTCTGTGCCGAGTACAGAACCAGTTGAAAGATCAGATTTCGTACATGCAGGGCCGNTGNTCCGTGGAGTGAAGCCAAGTTCAGAAAGNTTCTTGTGCGATTCAGCGTAGTCCTTGAAAAAGGTGTCTTCATCCCTGGCATACAGATCCACATACCGTCT | |||||||||
gi|86597402|gb|CI282526.1|CI282526 CI282526 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): TTTTTATATGAAGTTTTTCTTCGGTCAACAAAAAGTATCTCGAGGTATCGGTACCTCGCGGTACAAAATCATTTCCGATCGTTGGATCTAACGATGCCCAACCCACCCAGCTAGATCCAACGATCGGAAACAATTTGGTACCGTGAGGTATCGGTACCTCGAGTTACTTTTTGTTGGACCGGAGTAAATCTCATCTCCTATATACAAATAACACACAAAGACGAACAAATTAACGTCCATATATCGATCGGTCCAAAGAATGACCCCCGATCGACCTATCTACACGCAAGAACACCTCAAATCATCATCAACGATATGATGTGGTATCAACGATCAGTAGCCGGCGATCTCCGAGCTCTGCTGGTCGCCGTGCTTCTTGCCACCGGACTTCTTCTGCTGGTACTTGTCCTTGATCCACTGGAACCCATGCGCCGTCCCCTCCTTCACCTTCCTCAGCCCGCTCGCCGCCGCCGCCTTCGTCTTCTCCATACCCTTCTTCCCTCCTCCTCCTCCTCCGCCGCCGCTCCTCTTCCCCGACGACGAC | |||||||||
gi|89182339|gb|CI113708.1|CI113708 CI113708 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): TAGCAAAACTGTTGAAAACTTTATTATTTACTTTGCTCGAAATACAATATCGACTAATTGGAATATTAGATCATTAATCAGAGCTTGCAACACTGAAACTCTCTATTGCTGAAGTACTCTGATTAATTAACATCCTTCTGTTGCGTCATTGACGCTCCACATTGGTTTAGATCTCAGCATCCAATGTAATTAGAGGTTTGTTATCGTCCAACAAAAAGTATCTCGAAATACCGGTACCTCACGGTACCAAATTATTTTCGATCGTTGGATCTAGCTGAGCAGATGAGTTATCGGTACCGTGAGGTATCGGTATCTCGAGATAATTTTTGTTGGACCGAAGCAAATCTAAT | |||||||||
gi|88270682|gb|CI385940.1|CI385940 CI385940 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): GGGCTCTTCAAAGATAGATAGTTACCATTTTCAGAAATACATGTCCTACAAGCGATTTTGCTTGTTCCAATTACAAAATCCAGACAGAGAAATATCAAAAGCAATACCAGCTTAATCAAAACAAATGATACACAGAGCGGATTATGCATGTACCCTCCAGCAGCAATAACAACAGATCAAATACGGTTCTCCGTATCACTTCATCCTCATGTAATAATTAAGAGATTTGCTTCGGTACAACAAAAAGTATCTCGAGGTATCGGTACCTCACGGTACTAAATCATTCAACGGTGCAATCCATCCACTGGCCATGCCTGGAGCTGAACGTTCCTCCACCGTGCCGTATCGCAAATTTCTTCATGATCATCTGCACGCAGGAATTCCACTCCGAGGCCATCTGCTTGACTGACATGGACGGGGGGAGCTCACGCAGCGCGCAGTGAAAAG | |||||||||
gi|86896608|gb|CI328934.1|CI328934 CI328934 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): ATGTCCAAAGTGCTTTTAAATAGTGAAGCTATGTCATCTCCATATAATTCCCCATGAAATATTGATAGGGTATATGTAGACATGAAGGAAGTGTTCGTATGGCTGGATCATCACTAGAATTCTGTTATTTGACCCTGATACTTACTATGAGGCCATGCTGATGAAGAACATAGCAATCTTACTTGCTCTTCTCAGAAGCCTCGTATAGGTAGCTCACGATAACTACAGCTGCAGCAACAGCTACCCCGACAGCACTCTGTGCGAGTACAGCACCAGTTGAAAGATCAGATTTCGTAGATGCAGGGCCGCTGCTCCGTGGAGTGAAGCCAAGTTCAGAAAGCTTCTTGTGCGATTCAGCGTAGTCCTTGAAGAAGGTGTCTTCATCCTGCCATATGAACAGAAGAAATGGTTCTGAATGTAAAACTTATATTATGGAGCAC | |||||||||
gi|86510131|gb|CI152764.1|CI152764 CI152764 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTCTGATAAAAAACAAAAATATCTCAAGCTACCGGCATCTCACGGTACTAAATCGTTTCCGATCGTTGGATCTAACATCCATCCCGCCTAGTTAGATCCAACGATCAGAAATGATTTAGTATCGATACATCGAGATACTTTTTGCTAGATCGAAGCAAAAATCTCTTATACATTATTTGCACGGCACAAGAAGAAGAGCAATTAAGAGATGATGAATACGTATTAATTCAAGCTGGTGGTCTTGCAGTGCCCATCGCCGACTTGAAACTAAGTCCAGTGCATCCACGGAAGAGCTCATGGATGAAGTGTCCCATGGCGTTGCCCGCCAACCCGGCGCAGCCGACGAAGCAGCCGCCGCCGCACACGCATTGGCCACAGCAGCAGCACGGCGGGACGCCGTCGCGACCGAGCGCGCAGGCGAGGCAGAGCTCGCTGTCCGGGCACGTCTGGCACTGGTACGACCACGCCCGCACCAACTGCCTGCCGCCGCCGCCGCCGCCGCCGGCGACGGCGTTGCACTCG | |||||||||
gi|88277355|gb|CI398157.1|CI398157 CI398157 Oryza sativa (japonica cultivar-group) callus 50ppm CdCl2 Oryza sativa Japonica Grou GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): ACTATATGTCAAAAGTGCTTTCAAATAGTGAAGCTATGTCATCTCCATATAATTCCCCATGAAATATTGATAGGGTATATGTAGACATGAAGGAAGTGTTCGTATGGCTGGATCATCACTAGACTTCTGGTATTTGACCCTGATACTTACTATGAGGCCATGCTGATGAAGAAAATACCAATCTTACTTGCCCTTCTTAGAAGCCTCGTATAGGTAGCTCACGATAACTACAGCTGCAGCAACAGCTACCCCGACAGCACTCTGTGCGAGTACAGCACCAGTTGAAAGATCAGATTTCGTATATGCCAGGGCGATGGCTCGTGGAGTGAAGNCAAGTTCAGAAACGNTTCTTGTGCGATCCAGCGTAGCTCCTTGAAGAAGGTGTCTTAATCCCTGGCATAAAGATCCACATAGCGTCTAAATGAAGGATCTNCA | |||||||||
gi|89195709|gb|CI393738.1|CI393738 CI393738 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): ATATGTCCAAAGTGCTTTTAAATAGTGAAGCTATGTCATCTCCATATAATTCCCCATGAAATATTGATAGGGTATATGTAGACATGAAGGAAGTGTTCGTATGGCTGGATCATCACTAGAATTCTGTTATTTGACCCTGATACTTACTATGAGGCCATGCTGATGAAGAACATAGCAATCTTAATTGCTCTTCTTAGAAGCCTCGTATAGGTAGCTCACGATAACTACAGCTGCAGCAACAGCTAACCCGACAGCACTCTGTGCGAGTACAGCACCAGTTGAAAGATCAGATTTCGTAAATGCAGGGCCGGTGCTCCGTGGAGTGAAGCAAGTTCAGAAAGCTTCTTGTGCGATTCACCGTAGTCCTTGAAGAAGGTGTCTTCATCCCTGGCATAAAGATACAAATAGCGTCTAAATGAAGGATCTTCCACAATGCCTTGTCAGTTGGGAGCTTCACAAGCC | |||||||||
gi|86895498|gb|CI331328.1|CI331328 CI331328 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): GGAATAATATGTGTCAAAAGTGTTTTTAAATAGTGAAGCTATGTCATCTCCATATAATTCCCAATGAAATATTGATAGGGTATATGTAGACATGAAGGAAGTGTTCGTATGGCTGGATAATAACTACAATTCTGTTATTTGACCCTGATACTTACTATGAGGCCATGGTGATGAAGAACATAGCAATCTTACTTGCTCTTCTTACAAGCCTCGTATAGGTAGCTCACGATAACTACAGCTGCAGCAACAGCTACCCCGACAGCACTCTGTGCGAGTACGCACAGTTGAAAGATCAGATTTCGTAGATGCAGGGGCGCTGCTCCGTGGAGTGAAGCCAAGTTCAGAAAGCTTCTTGTGCGATTCAGGGTAGTCCTTGAAGAAGGTGTCTTCATCCCTGGCATAAAGATCACATAGGGTCTAAATGAAGGATCTTCCCCCATGCCTTGTCGTTGGGAGCTT | |||||||||
gi|89176636|gb|CI111352.1|CI111352 CI111352 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): TTTTAGGTAGCAAAACTGTTGAAAACTTTATTATTTACTTTGCTCGAAATACAATATCGACTAATTGGAATATTAGATCATTAATCAGAGCTTGCAACACTGAAACTCTCTATTGCTGAAGTACTCTGATTAATTAACATCCTTCTGTTGCGTCATTGACGCTCCACATTGGTTTAGATCTCAGCATCCAATGTAATTAGAGGTTAGTTATCGTCCAACAAAAAGTATCTCGAAATACCGGTACCTCACGGTACCAAATTATTTTCGATCGTTGGATCTAGCTGAGCAGATGAGTTATCGGTACCGTGAGGTATCGGTATCTCGAGATAATTTTTGTTGGACCGAAGCAA | |||||||||
gi|3106682|gb|D42404.1|D42404 D42404 Rice callus cDNA (H.Uchimiya) Oryza sativa cDNA clone AK118, mRNA sequence GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): TTTTTTTATGTCCAAAGTGCTTTTAAATAGTGAAGCTATGTCATCTCCATATAATTCCCCATGAAATATTGATAGGGTATATGTAGACATGAAGGAAGTGTTCGTATGGCTGGATCATCGCTAGAATTCTGTTATTTGACCCTGATACTTACTATGAGGCCATGCTGATGAAGAACATAGCTAATCTTACTTGCTCTTCTTAGAGCCTCGTATAGGTAGCTCACGATAACTACAGCTGCAGCAACAGCTACCCCGACAGCACTCTCGGAGTACAGCACCAGTTGAAAGATCATTTCGTAGATCAGGCG | |||||||||
gi|88245701|gb|CI245550.1|CI245550 CI245550 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTGGAAACAAATCCCAATCTCTTTTATATCTACAAGAGAAAAAAAATAACAGAATCAAACAAACTACGAACAAGAGCACCCATCTCCTATATGAGTTTTTCTTCGGTCCAACAAAAAGTATCTCGAGGTATCGGTACCTCGCGGTACAAAATCATTTCCGATCGTTGGATCTAACGATGCCCAACCCACCCAGCTAGATCCAACGATCGGAAACAATTTGGTACCGTGAGGTATCGGTACCTCGAGTTACTTTTTGTTGGACCGGAGTAAATCTCATCTCCTATATACAAATAACACACAAAGACGAACAAATTAACGTCCATATATCGATCGGTCCAAAGAATGACCCCCGATCGACCTATCTACACGCAAGAACACCTCAAATCATCATCAACGATATGATGTGGTATCAACGATCAGTAGCCGGCGATCTCCGAGCTCTGCTGGTCGCCGTGCTTCTTGCCACCGGACTTCTTCTGCTGGTACTTG | |||||||||
gi|109712834|gb|CI105442.1|CI105442 CI105442 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativ GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTAGTGAAGCTATGTCATCTCCATATAATTCCCCATGAGATATTGATAGGGTATATGTAGACATGAAGGAAGTGTTCGTATGGCTGGATCATCACTAGAATTCTGTTATTTGACCCTGATACTTACTATGAGGCCATGCTGATGAAGAACATAGCAATCTTACTTGCTCTTCTTAGAAGCCTCGTATAGGTAGCTCACGATAACTACAGCTGCAGCAACAGCTACCCCGACAGCACTCTGTGCGAGTACAGCACCAGTTGAAAGATCAGATTTCGTAGATGCAGGGCCGCTGCTCCGTGGAGTGAAGCCAAGTTCAGAAAGCTTCTTGTGCGATTCAGCGTAGTCCTTGAAGAAGGTGTCTTCATCCCTGGCATAAAGATCCACATAGCGTCTAAATGAAGGATCTTCCAACAATGCCTTGTCAGTTGGGAGCTTCAGAAGCCCCTCAGATTCCCCCTTCAGTAGCTCAAGAAAGTACGAATTGTCAAACTT | |||||||||
gi|88263569|gb|CI367343.1|CI367343 CI367343 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): GATTGTCATTCCCTAGTTGATTTATTGAATAATAATGGTGAACCTTCTTGATTCGGGAATACAATTGGTCGATTAATGATTAGAGCTGGAATCGTTGAAGTTTCTTAATAGAGATTTGCTCCGGCCCAACAAAAAGTACCTCGAGGTACAGGACCTCACGGTACCAAATTATTTCCGATCGTTGGATCTAGTACTGTGAGTTACCGGACTACCGGTACGTCGAGGTAATTTTTATTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTTTTTGTTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTGTATCTTCGTCCATGTGTAAATAGTGAGTACTCGGTTTACAAGAATTGTTTCTCCAATTTGGGGGTA | |||||||||
gi|89174219|gb|CI042112.1|CI042112 CI042112 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): TATTGAATATATGCTGAACCTTCTTGATTCGGGAATACAATTGGTCGATTACTGATTAGAGCTGGAATCGTTGAAGTTTCTTAATAGAGATTTGCTCCGGTCCAACAAAAAGTACCTCGAGGTACAGGACCTCACGGTACCAAATTATTTCCGATCGTTGGATCTAGTACTGTGAGTTACCGGACTACCGGTACGTCGAGGTACTTTTTATTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTTTTTGTTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTGTATCTTCGTCCATGTGTAAATAGTGAGTACTCGGTTTACAAGAATTGTTTCTCCAATTTGGCGGTAAAGCGTTACAGGCAACTGGGAGGCATGAGGACACCGGAGGCCGTGCCGTCGGCGTGTTGGCAGGTCGCCTCCGCCGGCTTGCCGCCGTCGAACGTGAGCTTGATGTCCTGCAGGC | |||||||||
gi|88240102|gb|CI239264.1|CI239264 CI239264 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): TTTTTTTTTCAACAAATATACCTCAGAATGAAGTTTTGAGGGACTAAATTATATGTAGGGCGGTAGATTGATAATGGTTTATAGAGATTTGCTCCGATCAAATAAAAAATATCTTGAGGTATCGGTACCTCACGGTACTAAATCTTTTCTAATTGTTGGATTTGACGATACCTATCCTACCGAGCTATATCTAGTGATCAGAGATGATTTGGTACCGTGAGGTACCGGTACTTCGAGATATTTTTTTGCTAGACTGGAGCAAATATCTGGTTTATATGATCGGTAACGAGAGCAAAGCAAAATATGTTTTAGGAATTCTGGATTCATTAGCCTAGCTGCCTAGGCGGTGATGGTGCGGCCACCGTCGACGCAGATGACCTGCCCGGTGATGTACGGCGCCGCCGGCATGCAGAGGAACGCGACGAGCGACGCCACCTCCTCGGGCTCGCCGATGCGGCCCATGACGACCCGCGCCGCCTCCCTCTCCTCCATCGCCCGCGCCGCCCCCGGCTCCAGCGCCACGCCGCTGCTGCCGGCGATATCGGTCC | |||||||||
gi|88345932|gb|CI632405.1|CI632405 CI632405 Oryza sativa (japonica cultivar-group) germinating seeds Oryza sativa Japonica Group GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): GATGATGATTTGAGGTGTTCTTGCGTGTAGATAGGTCGATCGGGGGTCATTCTTTGGACCGATCGATATATGGACGTTAATTTGTTCGTCTTTGTGTGTTATTTGTATATAGGAGATGAGATTTACTCCGGTCCAACAAAAAGTAACTCGAGGTACCGATACCTCACGGTACCAAATTGTTTCCGATCGTTGGATCTAGCTGGGTGGGTTGGGCATCGTTAGATCCAACGATCGGAAATGATTTTGTACCGCGAGGTACCGATACCTCGAGATACTTTTTGTTGGACCGAAGAAAAACTCATATAGGAGATGGGTGCTCTTGTTCGTAGTTTGTTTGATTCTGTTATTTTTTTTCTCTTGTACATATAAAAGAGATTGGGATTTGTCCAAAAA | |||||||||
gi|88252787|gb|CI351413.1|CI351413 CI351413 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): GGGTTTTAAATAGTGAAGCTATGTCATCTCCATATAATTCCCCATGAAATATGGATAGGGTATATGTAGACATGAAGGAAGTGTTCGTATGGGTGGATCATCACTAGAATTCTGTTATTGGACCCTGATACTTAACTATGAGGCCATGCTGATGAAGAACCATAGAATCTTAGTTGCTCTTCTTACAAGCCTCGTATAGGTAGCTCACGATAACTACAGCTGCAGCAAAAGCTACCCGACAGCACTCTGTGCGAGTACAGCACCAGTTGAAAGATCAGATTTCGTACATGCAGGGCCGCTGCTCCGTGGAGTGAAGCCAAGTTCAGAAAGCTTCTTGTGCGATTCAGCGTAGTCCTTGAAGAAGGTGTCTTCATCCCTGGCATAAAGATCACATAGCGTCTAAATGAAGGATCTTCCAACAATGC | |||||||||
gi|89182483|gb|CI113852.1|CI113852 CI113852 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): TTTTATGTCCAACAGTGCTTTTAAATAGTGAAGCTATGTCATCTCCATATAATTCCCCATGAAATATTGATAGGGTATATGTAGACATGAAGGAAGTGTTCGTATGGCTGGATCATCACTAGAATTCTGTTATTTGACCCTGATACTTACTATGAGGCCATGCTGATGAAGAACATAGCAATCTTACTTGCTCTTCTTAGAAGCCTCGTATAGGTAGCTCACGATAACTACAGCTGCAGCAACAGCTACCCCGACACGCACTCTGTGCGAGTACAGCACCAGTTGAAAGATCAGATTTCGTAGATGCAGGGCCGCTGCTCCGTGGAGTGAAGCCAAGTTCAGAAAGCTTCTTGTGCGATTCAGCGTAGTCCTTGAAGAAGGTGTCTTCATCCCTGGCATAAAGATCCACATAGCGTCTAAATGAAGGATCTTCCAACAATGCCTTGTCAGT | |||||||||
gi|88906350|gb|CI375422.1|CI375422 CI375422 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): GATTGTCATTCCCTATTTGATTTATTGAATAATAATGCTGAACCTTCTTGATTCGGGAATACAATTGGTCGATTACTGATTAGAGCTGGAATCGTTGAAGTTTCTTAATACAGATTTGCTCCGGTCCAAAAAAAAGTACCTCGAGGTACAGGACCTCACGGTACCAAATTATTTCGGATCGTTGGATCTAGTACTGTGAGTTACCGGACTACCGGTACGTCGAGGTACTTTTTATGGGACCGAATCAAATATCTTGTTACTATCACTAATTCACTATACTATCCGTTTTTTGTTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTGTATCTTCGTCCATGTGTAAATAGTGAGTACTCGGTTTACAAGAATTGTTTCTCCAATTT | |||||||||
gi|86839208|gb|CI331485.1|CI331485 CI331485 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): ATGTCCAAAGTGCTTTTAAATAGTGAAGCTATGTCATCTCCATATAATTCCCCATGAAATATTGATAGGGTATATGTAGACATGAAGGAAGTGTTCGTATGGCTGGATCATCACTAGAATTCTGTTATTTGACCGTGATACTTACTATGAGGCCATGCTGATGAAGAAAATAGCAATCTTAGTTGCTCTTCTTAGAAGCCTCGTATAGGTAGCTCACGATAACTAAAGCTGCAGCAACAGGTACCCCGACAGCAGCTCTGTGCGAGTACAGCACCAGTTGAAAGATCAGATTTCGTAGATGCAGGGGGGCTGCTCCGTGGAGTGAAGCCAAGTTCAGAAAGCTTCTTGTGCGATTCAGCGTAGTCGTTGAAGAAGGTGTCTTCATCCCTGGCATAAAGATCCACATAGCGTGTAAATGAAGGATCTTCCAACAATGCCGTTGTGAGCTTGGG | |||||||||
gi|88261719|gb|CI365295.1|CI365295 CI365295 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): ATGTTCAAAGTGCTTTAATTAGTGAAGCTATGTATCTCCATATTAATCCCCCATGAAATATTGATAGGGGTATTTGTAGACATGAAAGGGAAGTGTCCGTATGGGGTGGATCATTCACTAGAAATTTCTTGTTATTTTGGACCCCTGATACTTACTATGAGGGCCATGCTGATGAAGAACATAGCAATCTTACTTGCTCTTCTTAGAAGCCTCGTATAGGTAGCTCACGATAACTACAGCTGCAGGAACAGCTACCCCGACAGCACTCTGTGCGAGTACAGCACCAGTTGAAAGATCAGATTTCGTAGATGCAGGGCCGCTGCTCCGTGGAGTGAAGCCAAGTCAGAAAGCTTCTTGTGCGATTCAGCGTAGTCCTTGAAGAAGGTGTCTTCATCCCTGGCATAAAGATCCACATAGCGTCTAAATGAAGGATCTTCCAACAATGCCCTTGTCAGTTGGGAGCTTCAGAAGCCCCTCAGATTCCCCTTCAGTAGCTCAAGAAAGTACGAATTGTCAAACTCAGAGGCTCCT | |||||||||
gi|88544595|gb|CI472707.1|CI472707 CI472707 Oryza sativa (japonica cultivar-group) whole body 3mM SA(salicylic acid) for 1day Or GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): AGTCCAAAGTGCTTTTAAATAGTGAAGCTATGTCATCTCCATATAATTCCCCATGAAATATTGATAGGGTATATGTAGACATGAAGGAAGTGTTCGTATGGCTGGATCATCACTAGAATTCTGTTATTTGACCCTGATACTTACTATGAGGCCATGCTGATGAAGAACATAGCAATCTTACTTGCTCTTCTTAGAACCCTCGTATAGGTAGCTCACGATAACTACAGCTGCAGCAACAGCTACCCCGACAGCACTCTGTGCGAGTACAGCACCAGTTGAAAGATCAGATTTCGTAGATGCAGGGCCGCTGCTCCGTGGAGTGAAGCCAAGTTCAGAAAGCTTCTTGTGCGATTCAGCGTACTCCTTGAAGAAGGT | |||||||||
gi|88201976|gb|CI202331.1|CI202331 CI202331 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GGTATCGTGAGGTACCGGTAC EST sequence (targeted fragment marked with yellow): GACACAAACCACTGTTCTGNTAGATATTAGAGAGCACACAGAAGACGGAATAATATATGTCCAAAGTGCTTTTAAATAGTGAAGCTATGTCATCTCCATATAATTCCCCATGAAATATTGATAGGGTATATGTAGACATGAAGGAAGTGTTCGTATGGCTGGATCATCACTAGAATTCTGTTATTTGACCCTGATACTTACTATGAGGCCATGCTGATGAAGAACATAGCAATCTTACTAGCTCTTCTTAGAAGCCTCGTATAGGTAGCTCACGATAACTACAGCTGCAGCAACAGCTACCCCGACAGCACTCTGTGCGAGTACAGCACCAGTTGAAAGATCAGATTTCGTAGATGCAGGGCCGCTGCTCCGTGGAGTGAAGCCAAGTTCAGAAAGCTTCTTGTGCGATTCAGCGTAGTCCTTGAAGAAGGTGTCTTCATCCCTGGCATAAAGATCCACATAGCGTCTAAATGAAGGATCTTCCAACAATGCCTTGTCAGTTGGGAGCTTCAGAAGCCCCTCAGATTCCCCCTTCAGTAGCTCAAGAAAG | |||||||||