| mature miRNA: GTATTATGGGACGGAGGGAGT species: Brachypodium distachyon database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|270402606|gb|GT786609.1|GT786609 CCXG2678.b1 CCXG Brachypodium distachyon superpool Brachypodium distachyon cDNA clone CCXG26 GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): ATAAGGGATCTCCAAAACGGACCCCTCCAAGACTATGGCGTCGACGGTGCTCCGATCCGGCTGCCGCGCGTTCAGCCGGTCCGTCCCGCGCGTGCTCGACGAGAAGCATCGGCTCATGCCGCCGTCGTTGATGCACACTCAGCGCTTCTTCAGCTCCGATGGGATTGAACCGATCAAGAGGTCGATGTCTCGTGATGAACGCATTATTTATATGGAACTAGATAGAATGGAAAAAATCCTGATTAAAAATGGAGAAAGGCTAGAAAAAATCAGACTGAAGGACGAGCATGATGCTATGTATGCTGAACGTAGGCTTGCGGGTATAGGTGCTATCATCGTCGTCTCTGGGATCGCAGGCCTTTCCTTTTGTGTTAATAAAGTTAAGAAAGTAGTACTCCCTTCGTCCCATATTAAGTGATGAAGTATTACATGTATCTAGACACTTGTTGGGTTTGCAAATTTGAGTCACTTAATATGAGACAGTTTAGTTTGATTTGTTTAGACAAGGTTTGAGTGATGGCTACTCTGTTGGTATGTGTTTTATGTGATGCAAAATCACAATTACTATAAGCAAGTGCATCTGAACGTGACTGTGAGTATGCACGTGCACGCACGTCTTGGATTGTTTGATTTTTTTGTACATATTCAAAATTGTTTCTGCAGCAAAGAGCATGATTCTGAGTGCAGCTTG | |||||||||
gi|270473091|gb|GT857952.1|GT857952 CCYP12399.g1 CCYP Brachypodium distachyon leaf + leaf drought Brachypodium distachyon cDNA c GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): TCTAGCATAGGTTACAATACAACTTTACCTTTTAAAAAAATCTTTATCCCACTAATTTTTGTCCCTCTTCTCCCGGACAAATTAATGCTTTGACTTCAAATGACAAGAATGTTTTCTCCTAAAGTGAACAAATTAAATGTGACTTTGGATTCGATTCAGTACTAACACTTTCGTCTGCCCCTGTTCAGTTCATTGCAGAGGCAGGAGTTGGCCACAAGATGACAGAAACCATGGTGAAGGAAGCAAGCGATTGGTTTGATCGCTTCCTGTAGTTTGGCCGGGGGTTTCTTTGATGAATATGTCCACCTAATAATGTCAGTTCACCCTGTACCCCAATAAATTATCCTCGTTTTGGATCGCGTTCTGCCGAATAAGACTGAAATTAGTTAGCCACTTTCATAGTCACACCTGATTTGCATCCCAATCAACTGTGAATTACAGTACTACAGGTACATAATGTACTTCAGTTTTAAAAATTTACAAAATACGTGTGTTGGCAGAATAAAGTTCTATTAGGGTATCTGATATCTATTTCCGAAAACCGGTTTTAAAATTTCGGGGAATGCCGTATTTATGAAACAGTGTAGTACTTCCCCCGTCCCATATTAAGTGTCTTTCTATTACATGTATCTAGACACATTTTAGACATAGATACATTTATATTTGAGC | |||||||||
gi|78020873|gb|DV489260.1|DV489260 5652_B08_C16Z_062 Brachypodium distachyon root EST library Brachypodium distachyon cDNA clone GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CTCGTATAGAGGTTAGACATCACATTTGTAGTTCAACAAGGTTGCCTTCAAAGGCTCTATGCAAGACTTGATCCTGATAAAAATGTTTATTACTCCCTCTGTCCCATATTAACTGACGAAATATTACATGTATCTAGACGCTTTTTGGATATAGATACATCCATATTTGGGCAAATTTGAGTCACTTAATATGGATGGAGGGAGTAGAATATATGAACCGCTGATTGATGATTGGTCTGCCGTAAGCGGTGGGTTTTGAGAAGTGGAAAGTGGGTCAAAACTGGGCCCTGGCTGGTTCAGGAAACTGGTCGGTTACCATGGCAAAGACATCCAGGTTTTGTTGGTTGAATATTGTAGTCGTTCTTCTTTCAGATTCAAAATTTGTAGCTTATCTTTGAATCACGGATGTATTATTTGTTTGAATAGAACCCTGGCCATGAGACAGAAAACCTGTCCTGCCTGGTTTACCTTTATGTAAGTTGGAGACACAGTGGGTCTTGCAATCTTGGTCAGTCGAAGGCTTGTATTGGGATATATAGTTGTAGTGGCTGGCTATTGCATGAATGCTCGTAGTTGAGATAGTACCCAAAGATGGAGTGAAACCTAAAAGAGGCTCATAAAAAACTGACACTTCCACAGGTCTATATTTTTCTACTTTCTTTTTCTTATCAGTAGTGTTGTAGTT | |||||||||
gi|270437031|gb|GT816594.1|GT816594 CCYO3664.b1 CCYO Brachypodium distachyon flower + flower drought Brachypodium distachyon cDN GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): ATAGTTGGTACATTCTTGCATGTAATCTCAATATGACAATATCCCATGTATAGACTAGTTTGTTAGTGCCTATAGGCTACCTTTATAAGACCTAGTGCTGTACTCATTTGACTCGATATGGAAGCTTTGTTGCTTTATTTGCTTAGAATATATTCTATTCATTACACGTGGAATGGTCTGATTGTGATAGCTAGACTACATAACACATAACCGTAAGCGGTATTACAGAATAATAGAGTTGCATGGCGTCTTGTGGGGGAGATACCAAGTTATTTGAAGTAAAACATACACCGGTAATCCAGTATGGTTGTTGCACATGCACTTGAATTTGAAGCCAAGTATGAACAGTTGAACACTTCTATCGCATCATAATACAACTATACAAGTGCTGAGTATGTGTGATGTATCACCTAATTTTAGTGTTATTACTATGACAGTAAATGTAGATCACTGCATTCTCAGAATTAAGCGCAATATCCATTTTGTTTTAACCGAAAGTAACTAATTTATGAATCACATGCTCCCTCCGTCCCATATTAAGTGACTTAATTTTTTCCAAATATGGATGTATCTATGCCCAAAAAGCGTCTAGATAAATATAATATTTCCAAATATGACTGATTTTTTTTTCTTACATAAAAGAATATTTAGTCCATCATGGGAGTTATTAAGTAGAGAATTTATACGCCATAATGTGTGCCGTTTCTCGCTATATTAAAACACAAGTCTTTATTAGCAAATAACCTTGCTCAACTTCTTTGATA | |||||||||
gi|270389123|gb|GT771072.1|GT771072 CCXF8464.b1 CCXF Brachypodium distachyon abiotic + biotic stress pool Brachypodium distachyo GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): ATGCATTATTTTCATGGATGAAATTGATGCCATTGGTGGCCGAAGATTCAGTGAGGGCACTAGCGCTGACCGTGAAATACAACGGACGTTGATGGAGCTCCTAAACCAGTTAGATGGATTTGATGAGCTTGGGAAGGTCAAGATGATTATGGCAACAAACCGTCCTGATGTCCTGGATCCTGCACTACTTCGTCCTGGACGCCTAGACCGAAAGATAGAGATTCCATTGCCAAATGAGCAGTCCAGGATGGAGGTCCTGAAAATCCACGCATCTGGTATCGCCAAGCATGGCGAAATTGATTATGAGGCTGTGGTTAAGCTCGCCGAGGGCTTCAATGGTGCTGATCTGCGCAATGTCTGCACTGAAGCTGGCATGGCCGCCATTCGAGCAGAGCGTGACTACGTCATCCATGAAGACTTCATGAAGGCAGTGCGGAAGTTAAATGATGCCAAGAAGCTCGAGTCTAGCGCGCACTACAGCGCTGACTTCGGCAAGGAGTAAGTGGCGACACATTGTCGTTCTCTTCTACATTGTACTGTAATGTTGTGGGATGGCTTCTTATGGACGCGAGTTCGTCTTACCGTAGTCTAAACAGATCGCCTTGGGAAATACTCCCTCCGTCCCAAAATAAGTGACATGGATTTGTTTAAGAGTCTATGCAAATCCTGGTCAGTTATTTTGGACCAGAGAGTAGCTGGTTACATTTATGACGTTTTTTTCTTCTTTCTTTTTTTTGAGGCAAATGACGTTTGCT | |||||||||
gi|270456596|gb|GT839097.1|GT839097 CCYP1633.b1 CCYP Brachypodium distachyon leaf + leaf drought Brachypodium distachyon cDNA cl GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): TGAGCAGTTCGTGAAAAGGCGCCAATTGGTCAGTTGTTCATTCATCAAACTTGTAATGACATTTCAGTCGAGAACTGCATCTTATTCAATTTGTTGTAAGCTAGCATGAAGCGATCAAAGGCACTTGTATGTATGTAGTATTATACTCCCTCTGTCCCATATTAAGTGACTCAAATTTATCTAAATATAAACGTATGTGTATAGTAAAACACGTCTAGATAAATGTAATAGAAAGTTAATATGGGACGGAGGGAGTAGATCCCAAAACTTGCAGCAATCTTTATGTATATTGTACAACTGGGTGA | |||||||||
gi|270378820|gb|GT763284.1|GT763284 CCXF4237.g1 CCXF Brachypodium distachyon abiotic + biotic stress pool Brachypodium distachyo GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GAGAGATTCTTATTTTTTTTATTCTTTGAGCCTACGGGAAGAGAGATTCTTTTATTGAATATTCGCTTGAGATTTGTTTTTGTTTTTGTTTTCCAGCAGATACGTGCAAGAGATTGTGGACCGTGTGATCTGATCCGGATCGAATGGGGCTTGTGGATGGCTGTCAGAAATTACACGTAGCCGCCGGCTAGTAAAATATACTCGACTGTCAACACGACAACACCCCATTACTTCGTGACAACGAATTGCAACAACAGGGGATGGACGAGACGGCGAGGCTTCCACGGCAATGTCACCCACATCACCGCACGCGTCAGCGTCGATCAATTAAATCTTTTCTCTTCAGAAGAAAAAGAAAGTGGACGTCCCTTTCATGAGATGCAGAAACACTTAAATATCATTGGCGGGCCAGAGCATAAAGTTTTTTCTGATTGCGCAAGATATACAATAGTAATTGTGCAGTCCAAAAAATGTACTCCCTCCGTCTCATAATAAGTGACTTTCTATTACACGTATCTAGACGCTTTTTAGACATAAATACATCCATATTTTGACAAATTTGAGTCACTTAATATGGTACGGAAGAAGTACATCCATAGCGACACCGACATGTACGGTTGGAAGCAATTTTACCTAAAGAGTGATCCTTTTTC | |||||||||
gi|270479938|gb|GT861853.1|GT861853 CCYP14619.b1 CCYP Brachypodium distachyon leaf + leaf drought Brachypodium distachyon cDNA c GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CGGTCCCGAGTCCCAATGGCTTTCGATTTTGGGGTTCCACTTCCTCGTACCAGCCGACCGCTCGTGCGAGGATCCGAGCAGCCGGCAACGACGGTGGTGAGGAGCCGCTTGCCGAGGGCTAATTCAGCAAGGCCTAATTATCGATTCGCACGAGCTAGATGTCAGATCGTCAAACTCTAAGGCAACAACAACGTGTATTTGCCATTATCTATCACTTTGCCGAAGCATTAGTCTTCGAAGTGGTCAATGATGCCGGCAGCTATGGGGTTGGGACTTTATGCGTGTCATTGTCAAGCCAACTATCTCGATAGTACAAGTCGTCATACAAGTCAAGCTTTGTAAAGTGAAGATATTAAGGGATTGGTGCTATCAAGACTCAGGAGTCGAAGGGGCCAAAAGTGCGAAAGGAAAAGAAAATACTTCCTCCGTCCCATATTAAATAACGAAATATTACATATATTTAGACGTTTTCTGGGTATAGATACATCCATATTTTGTCAAATTTGAGTCACTTAATATGGAACAGAAGGAGTACTAAATATTGTACAACATCACAAGCATCCGGGGAGGAGCTCCACTTAAAACTTGTGCATGATATGTGTCTGGTACACATAGGGCTTGTTTGGTAGGCTGCACCACCCTAGCATGGCCTTCCTCCCTAAGCCATGCATGCCGACCCTAGACTTTTTTTTTTTACCAACATGCCGACCCTAGACGTGCTGAGTACAGACAACTGCAGAGTGTGTTTGATAGCCTTG | |||||||||
gi|78018903|gb|DV487290.1|DV487290 5530_E02_I04RZ_008 Brachypodium distachyon root EST library Brachypodium distachyon cDNA clon GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CCACGCGTCCGCCCACGCGTCCGAGCAAAGAAAGCCATTTCCCTTCAAGATCACGAAGATGTCGACGGTCACCGGTGCCTACCTCGACCGCAAGCTCGCCCTCGCCAAACGCTGCTCCAGAGAGGCAACGCTCGCCGGAGCAAAGGCGGCGGCCGTGGCCACGGTGGCGTCTGCAGTCCCAACGCTGGCGAGCGTTCGGATGTTGCCGTGGGCGAAGGCGAACCTGAACCCGACGGGGCAGGCGCTCATCGTCTGCACGGCGGCAGGGATGGCCTACTTCGTCGCCGCCGACAAGACCATCCTCTCCCTCGCCAGGCGCCACTCCTTCGAGGAAGCTCCCGAGCACCTCAGGGACACTTCCTTCAAGCTCCATGGCGCCCCCGCTGCTCCTGCTGCTCGTCCCCGGCTGTCATTCGACATTCTCCAGGCCATGAGCCCGTGATGAAGCTGGATGGATCCACCTACCAGGGCGAGCTCCTGCTGCAGGGTCGTCCAAATGTCCCAAATAAACAAAGTACTAATGTCTGAATGTTTTCTCCCCCCCGACCGAGAGAGGAACAAAAAATGCTGTACTAGTGTATCACCGTACTGTAATTAGCACTACTGGCTTACTGCATGTTGTTGTTGGTCAGTTGGTGCTCCAAATTAACGCCGCTTCTTTGTGCTTTCTTAACGGTACTCTCTCCGTCCCATATTAAACGTT | |||||||||
gi|270420454|gb|GT803212.1|GT803212 CCXG12030.g1 CCXG Brachypodium distachyon superpool Brachypodium distachyon cDNA clone CCXG1 GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CCCGTCCCCCTTCCTCCAAACCAAAAAATTAGGGATCTCCCAAAACGGACCCCTCCAAGACTATGGCGTCGACGGTGCTCCGATCCGGCTGCCGCGCGTTCAGCCGGTCCGTCCCGCGCGTGCTCGACGAGAAGCATCGGCTCATGCCGCCGTCGTTGATGCACACTCAGCGCTTCTTCAGCTCCGATGGGATTGAACCGATCAAGAGGTCGATGTCTCGTGATGAACGCATTATTTATATGGAACTAGATAGAATGGAAAAAATCCTGATTAAAAATGGAGAAAGGCTAGAAAAAATCAGACTGAAGGACGAGCATGATGCTATGTATGCTGAACGTAGGCTTGCGGGTATAGGTGCTATCATCGTCGTCTCTGGGATCGCAGGCCTTTCCTTTTGTGTTAATAAAGTTAAGAAAGTAGTACTCCCTTCGTCCCATATTAAGTGATGAAGTATTACATGTATTTAGACGCTTGTTGGGTTTGCAAATTTGAGTCCCTTAATATGAGACAGTTTAGTTTGATTTGTTTAGACAAGGTTTGAGGGATGGCTACTCTGTTGGTATGTGTTTTATGTGATGCAAAATCCCAATTACTATAAGCGTGCATTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG | |||||||||
gi|270384981|gb|GT768667.1|GT768667 CCXF7151.g1 CCXF Brachypodium distachyon abiotic + biotic stress pool Brachypodium distachyo GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GCTTCTTTCTCGCAGGCTAGATCTCTGAAACACATTAGGAGTTAAGATTTATTTCCGTACTATTACACCTGAATGAATCTTTCTTTATCGACTATATTTTCAGGAATGGTTGGCCTTAATATAGGTCCTTGCTTGCTGCTCTAATGCTTTCCTTGATATAATGCTCTTGCACTAAACAGAATCTACGGCTGTTCAAGATGAGTATGTGTGGAGATATTAGTTGATGTTGCAAGGGGGTGTGGTAATTTTGCAGATATTTATCCATCCACAACCATTACCAACTACAGCGAGGTAACTGTAATATCCGATGCCCCTTTGCGTTTTCAGACTGAACAAGAAGTGCATAAAATCCTAGCACCAACGAAGCCAAAACAATACTCCCTCCATCCCATATTAAATGACTTTCTATTACATGTATTTAGACGGTTTTTAGGTATAGATGCATCCATATTTGTGTAAATTTATGGCTGTGTGCATCGATCGATGCAGAGGCCGGGGGATGTCCTCATTTTCGAAAAAAAAAATGTGTAAATTTAAGTCACTTAATATGAGACGGAGGGGGTATAATATATAGAATAGTTACATCATTTACTTTCCATTTCATGCGAAAACAATGTACTCCCTCCGCCCAATAAAAGATGTCTCAACTTTGATTAAATTTGAATGCATCTATACACTAAGTCATGTCTAGACT | |||||||||
gi|270390070|gb|GT769493.1|GT769493 CCXF7608.g1 CCXF Brachypodium distachyon abiotic + biotic stress pool Brachypodium distachyo GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): AGGGAATTTCGCGAAGCTGAGAAAATCCCGGGCCAGATACTTGCTGCTCGACAACCTCGCCTCGTACACCTCCAGCAGCTTCTTCAGCTTCTCGGAATTCACCCATTTCGCCTTCATGCGATACTTCATGGTGACTGAGTACTACGGGGATGTGGTTGACGCGTATCCCCACTTCAAGGCATGGTGGGAGGCGTTGTTGTCGAGGCCGTCGGTCAGGAAGGTCATGGCCGGCATGCCTCCAGATTTTGGGGTAGGATGTGGGAAGATCCCATGATAAGAGAACAGGTATGGTTGTGTGTATTAGTGTATGAAACTTTGGTCATCTTGTTTATGCATTTTGGAATAAATGTCATTTAAATATCTCTCACGAAAACAATCGATATTATACACATTTCTTTTCAGGGCCATGTCTCTCAAACTGCATGGTTAACTGTCTAAATACTCCTTCCGTCCCATATTAAGTGTCGAAATATTGCATGTATCTAAACGTATTTTAATATATAGATACGTCCATATTTAAACAAATTCGAGTTACTTAATATGAGACGGAGGGAGTAGCTTTTAATCTTTTCGCCCCTTGTAATTTTCCTTATATATTGTTATGTCCTTAGTTACATTAATAAAGATTGAATGAGCTTCTC | |||||||||
gi|270438920|gb|GT819634.1|GT819634 CCYO5573.g1 CCYO Brachypodium distachyon flower + flower drought Brachypodium distachyon cDN GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): ATTGATAAAATATGGCGGGATGATACTCTGCCCTGTCGCCTATATCTTAGGCATTGTGTTCTTGCGGCAAAAAATCTCGGAGAAGCAGCATACAGTAGCTTCTTAGACCACACCTATCTGGGTGACCGGAAAACCACAATAAGGGAATACTTGGCCACGACGGGAGCTGGCATCATGGAAGAGGAGCCTCCTGAATCCCTAAAAAGCCGCTACGGCGGCTAAGAGCATCTTCAATGCAAGTTGCTTAGGGAGGTGCTTGCACAAAATAAACCGGTTTTTGTCTAAGCATGTGTTCTACAGGACAGGTGCTTAATTAGACACCTCTAGTATAGAAATAAGCACTGGTGTTTGAAAATAAACCGGTTTAATTTTGTAACACCATCTTAAGCACCTTGCATTGAAGGTGCTCTAACTGGGCTACGATTCTCACAAGTCACAGACACAGCCAAATTGACAGTCCATATAAATGGGGACGTGCTAAATAATGTACTCCCTCCGTCCCATATTAAGTGACGCAATATTACTTGTATCTGGACGTCTTTTGGATATAGATACATCCATATTTGTGAAAATTTGAATCACTTATG | |||||||||
gi|270410736|gb|GT794363.1|GT794363 CCXG6870.g1 CCXG Brachypodium distachyon superpool Brachypodium distachyon cDNA clone CCXG68 GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): ATTATCATCACATCTTCCCTAATCATCATTGGCAGAGGACGATGATCGTAAAACCCTCAGCTTTGGCCGATGTCAGCCCTACGCCCATAGTGTGCCGTGTTGCACGGCCCCTCCCGTCCGTTCTGCCATCGCGCCGCCCGTCTACCCTGCTTGTGTCACGTGGTAAGCGACTAAAATAGTGTTACTCTCTGCGTCCCATATTAAGTGACTCAAATTTGCCCAAATATGGATGCATTACCCAATTCTATGCGTGAATACTAACTGACACGAGTAACAACCTGATGAGATTGATCCCAACAGGAACAGCTTTTTGTTTGTAGAGGAGCCCAACGGGGACAA | |||||||||
gi|78012604|gb|DV480992.1|DV480992 5300_D08_D08ZR5_058 Brachypodium distachyon stem plus sheath EST library Brachypodium distach GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CCACGCGTCCGCGGACGCGTGGGCCAGCACACTCACTGCCTGCGGAACCATCGCGGCGCGAGGCACACGCAGATCGTCCTCACTGGTGTCATATGGAGCAGGCGGCTGAAGAATGCCAAGCACCAACTCGCGTGCAACACGCTCCGGGAAACCAGTCCGTGCCACAACCGAAAACCTGCCCTACTCCAGCCAGCGGAACTGCCGCCACCAGCAGCAGCACCGCCCCGCGGGGTAAGATCACCATCCACCACACCCCTTTGACACTGAAAGGCAATCGTGCGAGGCCGCCGAGGGGGACCACCACCAAGATCATGCCTGGGGTCGTTGCTATCGTCGCCCCTAAAGTCCCTCTTGGCCTTTTTTTCAGGGTCAAGATGCAGGTTGCCTGGGTGGAGCCGGCCATATATGCATCTGCTCGACAAATATTCGGTGGCATCTATAAAGTGAACCACCAAATAAACTGTAGTTTCTCTTCTTGTTTTTTGAGGGCATCTACGCCCTTAACAGAGCTCTCACAGCCAAATCGAATGATTTGCATGCAGAACAGGAGAGTTACTACTGCAGCTTTTGGTTTGATTAGTCTGTACTCTGTTTCAGGGCACTGTCAGCGCTGATAATATAAAGTAGTCCTTCCGTCCCAAAATAATTCCCAAAATAAATCGGAGGGAGTATATATACACGCACGATATCTTTTGCGTACGTGAACATGTGCATAGTACAAAAGACATCT | |||||||||
gi|270480176|gb|GT862091.1|GT862091 CCYP14755.g1 CCYP Brachypodium distachyon leaf + leaf drought Brachypodium distachyon cDNA c GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GATTTTCTCAGCTTCGCGGAATTCACCCATTTCGCCTTCATGCGATACTTCATGGTGACTGAGTACTACGCGGATGTGGTTGACGCGTATCCCCACTTCAAGGCATGGTGGGAGGCGTTGTTGTCGAGGCCGTCGGTCAAGAAGGTCATGGCCGGCATGCCTCCAGATTTTGGGGTAGGAAGTGGGAAGATACCATCATAAGAGAAAAGGTATGGTTGTGTGTATTTGTGTATGAAACTTTGGTCATCTGGTTTATGCATTTTGGAATAAATGTCATTTAAATATCTCTCACGAAAACAATCGGTATTATACACATTTCTTTTCAGGGCCATGTCTCTCAAACTGCATGGTTAACTGTCTAAATACTCCTTCCGTCCCATATTAAGTGTCGAAATATTGCATGTATCTAGACGTATTTTAATATATAGATACGTCCATATTTAGACAAATTCGAGTCACTTAATGTGAAACGGAGGGAGTAGCTTTTAATCTTTTTGCCCCTTGTAATTTTCCTTATATATTGTTATGTCCTTAGTTACATTAATAAAGATTGAATGAGCTTCTTAATC | |||||||||
gi|270390069|gb|GT769492.1|GT769492 CCXF7608.b1 CCXF Brachypodium distachyon abiotic + biotic stress pool Brachypodium distachyo GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): AGGGAATTTCGCGAAGCTGAGAAAATCCCCGGCCAGATACTTGCTGCTCGACAACCTCGCCTCGTACACCTCCAGCAGCTTCTTCAGCTTCTCGGAATTCACCCATTTCGCCTTCATGCGATACTTCATGGTGACTGAGTACTACGGGGATGTGGTTGACGCGTATCCCCACTTCAAGGCATGGTGGGAGGCGTTGTTGTCGAGGCCGTCGGTCAGGAAGGTCATGGCCGGCATGCCTCCAGATTTTGGGGTAGGATGTGGGAAGATCCCATGATAAGAGAACAGGTATGGTTGTGTGTATTAGTGTATGAAACTTTGGTCATCTTGTTTATGCATTTTGGAATAAATGTCATTTAAATATCTCTCACGAAAACAATCGATATTATACACATTTCTTTTCAGGGCCATGTCTCTCAAACTGCATGGTTAACTGTCTAAATACTCCTTCCGTCCCATATTAAGTGTCGAAATATTGCATGTATCTAACGTATTTTAATATATAGATACGTCCATATTTAAACAAATTCGAGTTACTTAATATGAGACGGAGGGAGTAGCTTTTAATCTTTTCGCCCCTTGTAATTTTCCTTATATATGTTATGTCCTTAGTTACATTAATAAAGATTGAATGAGGCTTCTC | |||||||||
gi|270378819|gb|GT763283.1|GT763283 CCXF4237.b1 CCXF Brachypodium distachyon abiotic + biotic stress pool Brachypodium distachyo GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GATCCAGACATGAGATGCCGCACGTCATCCAAACAACAGTCAGCCAGTCAGAACTCAAAAGCGATTCATCGACGACACATAATGAGTTCCCGTTTGTTGCAAATGGAGCCTGGATACTGTAGCCCCCAGACTCCGTTTGATACGGACGTAGGGCAGTCTGCTGTTGTTGCCGTGTGACGGTATCTTTGTACAGACTAGATGACGGGAAGAGAGATTCTTATTTTTTTTATTCTTTGAGCCTACGGGAAGAGAGATTCTTTTATTGAATATTCGCTTGAGATTTGTTTTTGTTTTTGTTTTCCAGCAGATACGTGCAAGAGATTGTGGACCGTGTGATCTGATCCGGATCGAATGGGGCTTGTGGATGGCTGTCAGAAATTACACGTAGCCGCCGGCTAGTAAAATATACTCGACTGTCAACACGACAACACCCCATTACTTCGTGACAACGAATTGCAACAACAGGGGATGGACGAGACGGCGAGGCTTCCACGGCAATGTCACCCACATCACCGCACGCGTCAGCGTCGATCAATTAAATCTTTTCTCTTCAGAAGAAAAAGAAAGTGGACGTCCCTTTCATGAGATGCAGAAACACTTAAATATCATGGCGGGCCAGAGCATAAAGTTTTTTCTGATTGCGCAAGATATACATAGTAATTGTGCAGTCCAAAAAATGTACTCCCTCCGTCTCATAATAAGTGACTTTCTAT | |||||||||
gi|270476390|gb|GT862214.1|GT862214 CCYP14827.g1 CCYP Brachypodium distachyon leaf + leaf drought Brachypodium distachyon cDNA c GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): TGATTAAAAAGGGAGAAAGGCTAGAAAAAATCAGACTGAAGGACGAGCATGATGCTATGTATGCTGAACGTAGGCTTGGGGGTATAGGTGCTATCATCGTCGTCTCTGGGATCGCAGGCCTTTCCTTTTGTGTTAATAAAGTTAAGAAAGTAGTACTCCCTTCGTCCCATATTAAGGGATGAAGTATTACATGTATTTAGACGCTTGTTGGGTTTGCAAATTTGAGTCACTTAATATGAGACAGTTTAGTTTGATTTGTTTAGACAAGGTTTGAGTGAGGGCTACTCTGTTGGTATGTGTTTTATGGGATGCAAAATCCCAATTACTATAAGCAAGTGCATCTGAACGTGACTGGGGGTATGCACGTGCACCCCCGTCTTGGATTGTTTGATTTTTTTGTACATATTAAAAATTGTTTTTGCAGCAAAAGAGCATGATTTGGAGGGC | |||||||||
gi|270407833|gb|GT788914.1|GT788914 CCXG3983.g1 CCXG Brachypodium distachyon superpool Brachypodium distachyon cDNA clone CCXG39 GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CTGTCCATGACTAACTTCTTCATGCTTTCTATAATTTTCCTTTCTGGATCTTCTACTTCTTGAGACACCATATGAAAACCATCTGCAAAGATACTGGCACTCGTACATACCCCAACTAGCCACATAAAACGACCTCTTATCCTTGAATTTCGACGCGAGCGCCAGTGGGGGTCGTTGGATCTAGGCTTGACTGCACGGAAAGCACCTCCAGCAGCTGTTGATTCGGCCAGGCTACTCTGACAGGAACCTTGTACTTCGTTTCAAACTCGGCAATCAGATTGTACATCTCCTCTTTCATCTCATTGATTTGCCTAAGCGAATCGCGACGTCTTTCTTCTCGTCAATGGTGGAGGGCTGGATGTAGCAGGTTAATTTTGCACAAGCACACAAAAGATTGAGTTTGTGCTAAAGAAGCGTAATACTCCCTCCGTCCCATATTAAGTGACTTTCTATTACATGTATCTAGACGCTTTTTAGTCATAGATACATCTATATTTGGATAAATTTGAGTCACTTGATATGGGACCGAAGGAGTAGCAGGGAATTCTACAAAAAGATTCATGGAACCCAAGTGGAATGTACCCAGTACATAG | |||||||||
gi|270479339|gb|GT859547.1|GT859547 CCYP13295.g1 CCYP Brachypodium distachyon leaf + leaf drought Brachypodium distachyon cDNA c GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GCCCTTCCTCCAAACCCAAAAATTAGGGATCCCCAAAACGGACCCCTCCAAGACTATGGCGTCGACGGTGCTCCGATCCGACTGCCGCGCGTTCAGCCGGTCCGTCCCCGCGCGTGCTCGACGAGAAGCATCGGCTCATGCCGCCGTCGCTGATGCACACTCAGCGCTTCTTCAGCTCCGATGGGATTGAACCGATCAAGAGGTCGATGTCTCGTGATGAACGCATTATTTATATGGAACTAGATAGAATGGAAAAAATCCTGATTAAAAATGGAGAAAGGCTAGAAAAAATCAGACTGAAGGACGAGCATGATGCTATGTATGCTGAACGTAGGCTTGCGGGTATAGGTGCTATCATCGTCGTCTCTGGGATCGCAGGCCTTTCCTTTTGTGTTAATAAAGTTAAGAAAGTAGTACTCCCTTCGTCCCATATTAAGTGATGAAGTATTACATGTATCTAGACGCTTGTTGGGTTTGCAAATTTGAGTCACTTAATATGAGACAGTTTAGTTTGATTTGTTTAGACAAGGTTTGAGTGATGGCTACTCTGTTGGTATGTGTTTTATGTGATGCAAAATCACAATTACTATAAGCAAGTGCATCTG | |||||||||
gi|270397565|gb|GT781506.1|GT781506 CCXF15225.g1 CCXF Brachypodium distachyon abiotic + biotic stress pool Brachypodium distachy GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GTGGTTCCTGAAGGACTAGATCAAGTTCCTTTTCCAAATCCTGCAGTTGTCTGTGCACGCTATAGCGACGAAGAATATTTCCAAGTGAGATGCAAAGGAAGTAAGGAGATATATAACCAACACTACGGACGATACAACATTGATAAAATATGGCGGGATGATATTCTGCCCTGTCGCCTATATCTTAGGCATTGTGTTCTTGCGGCAAAAAATCTCGGAGAAGCAGCATACAGTAGCTTCTTAGACCACACCTATCTGGGTGACCGGAAAACCACAATAAGGGAATACTTGGCCACGACGGGAGCTGGCATCATGGAAGAGGAGCCTCCTGAATCCCTAAAAAGCCACTACGGCGGCTAAGAGCATCTTCAATGCAAGTTGCTTAGGGAGGTGCTTGCACAAAATAAACCGGTTTTTGTCTAAGCATGTGTTCTACAGGACAGGTGCTTAATTAGAAACCTCTAGTATAGAAATAAGCACTGGTGTTTGAAAATAAACCGGTTTAATTTTGTAACACTATCTTAAGCACCTTGCATTGAAGGTGCTCTAACTGGGCTACGATTCTCACAAGTCACAGACACAGCCAAATTGACAGTCCATATAAATGGGGACGTGCTAAATAATGTACTCCCTCCGTCCCATATTAAGTGACGCAATATTACTTGTAG | |||||||||
gi|270396431|gb|GT778892.1|GT778892 CCXF13439.g1 CCXF Brachypodium distachyon abiotic + biotic stress pool Brachypodium distachy GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GGCAGTGTCGCCAAACCATATGGACAGCATCAACATCGTTAGACCCAAATGCTCCTCTGTGGAGCATGCTGAAGGAAATTCCATTGACACCTGCGGATAGACTATCAGTTGGAATTCATCTTTGTAAGCCAGAGTCGGAAGTTCATCGAAGTTTTTTCTTGAGTATGGGTAAGGAGTACCTCGAGGCATGGGCCCAGAAGTTCTTGGCTGGAGGGGAACCTGGAGCCTTATAGTTTTGGTAGCTCAACTGCCGCAGTCGGTTCTTCTTGTTGCTGCGTCAAGTCAGCCACACTCTCTGCTGATGGATTGTTGTTCAGAGGGCCTTGTTTCTGCTGCTACATATTGCTGCACCTCCTGTGCTCGTGGCATAGGTAAATATTACTACTAGGTATCATGTGGTTTAACAGCTTAGCTAACATTTCAGCCATGTTTGTGTAGTAATTTCTGGGCAATTTATGGGCACCTTAAGATCCAGGTTTATTTTGTCTGATGTCCCAAGATTACAGATGTCAACAGCAAATGATGGAATGTTATGTGTGGTTTGCTTTCTGACTCTGTCCACCGGAATGTTCTTCGTTTCAGACCTCTTTGATTCGAATGATTTTTATACTCCCTTTGTCCCATATTAAGTGACTTTCTATTACATGTATTTAGACGCCTTTTAGTCTAGAAAATTTTGAAG | |||||||||
gi|270437772|gb|GT821560.1|GT821560 CCYO6552.g1 CCYO Brachypodium distachyon flower + flower drought Brachypodium distachyon cDN GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): GAACGCCTTTTTTTTATGGAACTAGATAGAATGGAAAAAATCCTGTTTAAAAATGGAGAAAGGCTAGAAAAAATTAGACTGAAGGACGACCATGATGTTATGTATGCTGAACGTAGGCTTGCGGGTATAGGTGCTATTATTGTTGTTTTTGGGATCGCAGGCCTTTCCTTTTGTGTTAATAAAGTTAAAAAAGTAGTACTCCCTTCGTCCCATATTAAGTGAGGAAGTATTCCATGTATTTAGACGCTTGTTGGGTTTGCAAATTTGAGTCACTTAATATGAGACAGTTTAGTTTGATTTGTTTAAAAAAGGTTTGAGTGATGGCTATTTTGTTGGTTTGTTTTTTTTTTGATGCAAAATTCCAATTACTTTAAGCAAGGGCATTTGG | |||||||||
gi|78017502|gb|DV485889.1|DV485889 5509_G04_M07RZ_020 Brachypodium distachyon root EST library Brachypodium distachyon cDNA clon GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CCACGCGTCCGAGCTGCAAAGCTACTCCTTGCTGATACGATTTCAAAGGATTACCTTGGCCCTGAGATTGTTTCGCACTATGTATCTCATGGAGCAAGTACGACGGAGATCATCAAGCATCTCATTACTGCGCTAAAGAAAAATGCAGACAACGATATAGCTGCTCTATTCTTTGAGGCTCTGAGACGGGTAGGTACTTTGTTTTTATTCTGAATGCACAAAATATTTCTTCATGAGTCCTACAAATTGGTGATTAATATGGTGTCTTCTGTATTAGCATCCAAAAATATGCATTTGTTCTTCTCTATGATTATTAGCTTATTACCAATCACAAAAGAAATACTTCCTCCGTCCCATATTAAGTGACTCAAATTTGTCCAAATATGGATGCATCTATACCCCAAAAGTGTATAGATGCATGTAATATTTCGTCACTTAATATGGGACGGAGGGAGTAATAACTACTCCCTCTGATCTTAAATTCTTGACTCAAATTTGCCCAAATATGGATGTATCTATTCTTAAAAAACGTCTAGATACATGTAATATTTCGACAACAATTTAGGATCGGAGGGAGTAGTAACTATAGCAGAGAATTAGACCCATCCTACGTTATTGAGGATGCCATTACTGATTGAAAATCAACCTGATTGTAAACCAGGAACAGTTAGGGATGTACTCGTGCCTCTGTTGGTAAAAGCGCCATGCTATCATCATTGTACCTTTTGATGTCTGTTTCATCATTTCCAATTATTTAAAGATTTCAGTGTCTGACAGGAATTTAAGATAAATACTTTTTACAACTGCCCTGGATTTCTATTCTCATTTTTGCATTTGATTTTTAATCATTGTTT | |||||||||
gi|78002869|gb|DV471257.1|DV471257 5254_A05_B10Z_047 Brachypodium distachyon callus EST library Brachypodium distachyon cDNA clo GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CCACGCGTCCGCGGACGCGTGGGGGATGGCTCCATGAAAAACTTGCATCGGCTGGAGTTATGGGGTCTGAAAAGTTTGACATCTGTGCCGGAAGGCTTTGTGTACCTTAGGTCAGTGCAGCAGTTATGCATCGGTTCGATGATGCCTGAAGAGTTCCACAAGAGGTTAGTGGGAGCTGATCAATGGATTGTTCAACACATCCCCTACATTGGAGAGCCGTGATCGAGATGACATCCTCACAAGTAAGCATTGTGCTTCATCAGATAATTATGTTGATTACTGAGCATGAAACCGCATGACTTTGTTGCTAATCCAATAAAAGATGCCTGGTAGGACATGGCATGTGATCCTTTTTCAAAGAGCTTGTTGGTTTAATCTGTTGGAGCTCTTGTAATTTGAATGTACTCCCTCCGTCCCATAATTACCGTCGAAATATTACATGTATCTAGACGCTTTTCAGGAATAGATACATCCATTTTGGGGCAAATTTGAGACAAGAATTATGGAACGGAGGAGTAACATTTAGTGTATATGCTACTAGCTGCCAGGTTAAAACTTTTGTGAGGTTAGTTCGAACTAATGGCAATGGAAATCTCTTGATGTGAAATTAACTGTAAATCATTTTGCCAAATTTAGAATGGCATTCCTTGGTGCCTTTGCACTTTCAACAATAAGGTATCACAAATTCAAAAGCTTGCAGCTATTCCATAGT | |||||||||
gi|270381120|gb|GT762309.1|GT762309 CCXF3614.b1 CCXF Brachypodium distachyon abiotic + biotic stress pool Brachypodium distachyo GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): TACAGAGAGGAAGCGAAGACCATCAAACTCTGGAGGAAGAGGGAGAGGTGGTGTGATGATCCTCCCCAAAGGAAGAGGGAGCTCTGGATCAGGATGGACGGGTGCTGGGTTTGAGACATGACGGTCTCCTTGGTATACAGCGTTTGCTTGGTTGGAGCAGGAGGGTCAACAGGGTGGGACTATCTATGTACTCCCTCTGTCCCATATTAAGTGATAAAATATTACATGTATCTAGATGTTTATTTTTTGTATAGATACATTCATATTTGGGCAAATTTGAGTCACTTAATATGAGACGGAAGGAGTATATGTTGTGCAGCAAATAGAACAAGGCAACAACGTATTCAAAGCTGTGACATCTAGTCAAACTGCCCATAGAGTCAAAAGATTATTTTTGTATCATAGGACAACTATGCAATGAATATTTGACTTGCCACTCCAAAGAGTGGCCATC | |||||||||
gi|270403716|gb|GT785083.1|GT785083 CCXG1822.b1 CCXG Brachypodium distachyon superpool Brachypodium distachyon cDNA clone CCXG18 GTATTATGGGACGGAGGGAGT EST sequence (targeted fragment marked with yellow): CATTACATTACATACACGCGCTCTGATCACTGGGCTGAGCAGGGAGGAGGTGTTCATCATGCACGGTTGATTGATTTGCTTTCGAGCCTGGAATGCCCATGCCGTGTACCTGATCATTCTTTTTTTTTTCTCCTCTCTGGTGGCGTGTTCTGCTCTTGTTGCATGGTTTCTTCCTTGTGTATTGTAAAGTTTGTTGCTGCTTAAGCAACATTTTGTATGTATGCGCATGTATGTTATGTACTTCCTCCTTGTCATGTATGTTAAGTTGTACTAAACCCGTGTCAATAAATATGGAACAGAGGGAGGGAGTATACTTTTCACGCGATCTTTTGTGCGTCATGTACTCCCTCCGTCCCATATTAAGTGCTGAAATATGTATGTATCTAAACGTTTTTTGGATATAGATACATGCATATTTGAATAAATTTAAGCCACTT | |||||||||