miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: GTCCAAACATCCGATGTGATA
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|89175280|gb|CI111799.1|CI111799 CI111799 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati

GTCCAAACATCCGATGTGATA
|||||||||||||||||||.|
CAGGTTTGTAGGCTACACTGT

EST sequence (targeted fragment marked with yellow):
AAAGGTGCCAAAATAAGACATACCAGTCGTACTTAAAATCATTCCAGATTACAGACTAGGGGCTGTTTGGTTTCCAGAGACTTATTCTAAGTCCCTGTCACATCGGATGTTTGGACACTAATTTGGAGTATTAAACATACACTAATTACATAACCCATTTCATAAGCTTGGACTAATTCGCGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTTGACAATGTGATGCTACAGTAAACTTTTGATAATTATGGATTAATTAGGCTTAAAAAATTCGTCTCGCGGATTAGCTCTCATTTATGAAATTAGTTTTTTTATTAGTCCATGTTTAATACTCTAAATTAGCGTCCAAACATCCGATGTGACATGGGTTAAAAAGTTTTAGCCCCATCTAAACACCCCCGTCTATAGGTACCCCATACAACAACGTTCATTAAATCCAGGAATGCATCTTTCAAATAGTACAAAGCTCCAGCAATCTAACATTCATCAGGGCTAACAGGAACAGCACGTTTTCCAGCTT



gi|29668258|gb|CB664533.1|CB664533 OSJNEd10E21.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd10E21 3', mRNA sequence

GTCCAAACATCCGATGTGATA
| ||||||||||||||||||
AAAGTTTGTAGGCTACACTAT

EST sequence (targeted fragment marked with yellow):
CGGTGGGGATGAGGGACGCCATCGGCAAGCTCGGGGCATGGCTGACCGAGGGGCTGCCCGACCTGAGGGTCCTCGCCGTCGTCGGATTCGGCGGCCTCGGCAAGACGACGCTGGCATTGGCGCTGCACCGCAAGTTCGGGGAGAAGTTCGAGTCCCGGGCGTGCGTGCAGGCGTCGCAGAAGCTCAATCTCGCGGCGCTGCTCAGAAGCATCCTCAGGCAAGTCATGCCTCAGGTCCCTGACAAGGAGAGCACAGATGGAGACTCTCTTGCAGGGATCGAGAGATGGACAGACAAGCAGCTTAAGGAGAAGCTCACAGCACATTTGGAACAAAAGAGGTACTTCCTCTTAGTAGATGATGTCTGGTCTGTATCTTCATGGGAATACATCTGGGGATCTTTGCCCAAAAATAACAATGGCAGTAGAATAGTGGTGACAACAAGGTTCAAATCTGTAGCTGACGCCAGCACTCATCAGCAAACAGGTGACATCCACATGCTAGATCGGCTTTCAGATGAGAAATCAAAACGACTGTTCAATGAAAGAATCTTTAGTGGTGATGATTCATGCCCGGACGAGTTCAGGGAAACCAAGGACAAAATTCTGAAGAAATGCGGTGGTCTGCCACTGGCAATAGTTGCGGTGGCAGGACTTCTGGCCAGAGACCCAAGGTCAAAGAGCCATTGGACAAAGGTGCAAGATTCTTTTAAGTTCAGAGCTGGAGATGAATCTTAGGCCTTGTTTAGATGGGACTAAAACTTTTAAGTCCCTATCACATCGGATGTTTGAAAATTAATTATAAATATTAAACGTAGACTATTAAT



gi|218502830|gb|FG955091.1|FG955091 MA_PA64s_02902 Mature embryo cDNA Library of PA64s Oryza sativa Indica Group cDNA 5', mRNA s

GTCCAAACATCCGATGTGATA
||||||||||| |||||||.|
CAGGTTTGTAGACTACACTGT

EST sequence (targeted fragment marked with yellow):
ATTGGGAGCGATCTAGATCATTGCCGTATTCTCCCTACCGGATGCCTGAGAGAGGCTATGGACGCCGAGCCGGTGGTGGTGGCTATGACAGGTAAGGTTGCTCCCTTGGCTCTTGTTGCATTAGATACCTGAATTCCAAGCTGGAAAACGTGCTGTTCCTGTTAGCCCTGATGAATGTTAGATTGCTGTAGCTTTGTACTATTTGAAAGATGCATTCCTGGATTTAATGAACGTTGTTGTATGGGGTACCTATAGACGGGGGTGTTTAGATGGGGCTAAAACTTTTTAACCCATTGTCACATCAGATGTTTGGACGCTAATTTAGAGTATTAAACATGGACTAATAAAAAAACTAA



gi|58653885|gb|CK042565.1|CK042565 43619rsiceh_11721.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G

GTCCAAACATCCGATGTGATA
.|||||||||| |||||||||
TAGGTTTGTAGACTACACTAT

EST sequence (targeted fragment marked with yellow):
CGGGCTGCAGGAATTCGGCACGAGGCGAAAACTTTCAAGTCCCTATCACATCAGATGTTTGGATACTAATTATAAATATTAAAGCGTAGACTATTAATAAAATCCATCCGTAATCTTGGACTAATTCGCCAGACGAATCTATTGAGTCTAATTAATCCATGATTAGCCTATGTGATGCTACAGTAATCATTCTCTAATTATAGATTAATTAGTCTTAAAAAATTTGTCTCGCAAATTAGCTTTTATTTATGTAATTAGTTTTGTAAGTAGTCTATATTTAATACTCTAAATTAGTGTCTAAATACAGAGAACTAAAGTTAAATCCCTAGAATCCAAACACCACCTAAGCTCCTTGTTGGCCTATATATGCGAACAACTTTGAGCTTCATTTTTTATTGTTTCTTTTTTCAGGGAATACCCTGCCTGTGTGATGAAGTTGTGATGGACGTAATGTGGGCCATGAAGCGTCTCATTCGCTATTTTGTGCCCACTGAAACACCCGAGCTGGCTGAAGAGGACAGCCTCACTATG



gi|29627830|gb|CB632841.1|CB632841 OSIIEb11F12.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb11F12 5', mRNA sequence

GTCCAAACATCCGATGTGATA
||| |||||||||||||| .|
CAGATTTGTAGGCTACACGGT

EST sequence (targeted fragment marked with yellow):
CTATTCATCGCAAGGAGCAAAAGCAGTTTCAGTTCCAACCTCCTTCTGGTTCCATTGCTAAGAAGTAAGTTAATCTCTCTTTCTTGCTTCCTTCTGATGGATCCTTGCTAGTAGTAGTATTACTCCGAGCATGTTTAATTTGGTTGCTACCTGAGAGAAGCATGCCTGGACTTATGTCCTGTTTGAATCCAGGGACTAAATCACATAGAATGTTTGATATTAATTAGAAGTATTAAACGTAGACTAATGACAAAACCTATTCTATAATCTTAGACTAATTCGCGAGATAAATCTATTGAGCCTAATTAATTCATGATTAGCCTATGTGAAGCTACCGTATAAATATGCTAATTATGGATTAATTATGCTGATAAAATTTGTATCGCATATTAACTCTCATTTATGTAATTTGATTTATTATTAATTTATATGTAATACTTCCAGTTAGTGTCTAATATAGTCCTTGGCACATCGGATGTTTAGACGCTGATTTCGAGAATTAAATATAGACTAATTATAAAACTGATTGCATAAATGAGAGCTAATTCACGAGATAAATTTTTTAAGCCTAATTAATCTATAATTAGCACATATTTAATGCTAGCATCACATACACTATAATCATGGATTAATTATGCCTAAAAATTCGTCTCATGAATTACGTCTTATTTATGCAATTA



gi|218479162|gb|FG957000.1|FG957000 MA_PA64s_04811 Mature embryo cDNA Library of PA64s Oryza sativa Indica Group cDNA 5', mRNA s

GTCCAAACATCCGATGTGATA
. ||||||||||.||.|||||
TTGGTTTGTAGGTTATACTAT

EST sequence (targeted fragment marked with yellow):
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCCAGTATCAAGCAGAAAGTTGCAGAAATTGCTGCTCAGTTGGAACAATGTGGGCTTTGATTCTACTGACGGATTGATACCAGAAGGCAAATGAGATATTTGAAGCAATTGCTCGCCAACAAATCAACAATAATCTTCTTAAGTACAGTGTCAGAGGTATTCTCCTCAACGCAGGCATTTGTCAGCTATGCAGAGGTGATGTTGTTGCTATCACAAATTCAATGGAGCGATATCAGGATATTGACCCAACATTCTCGGGGACACGAGAATACAAGCTTTTATCTGATCTTGCTGCAGCTATGGAGGAAGGAGATGTTGCCAAGTTCACTGATGCCATTAAGGAATTTGACAGCATGACACGTCTGGACCCCTGGAAAACAACCCTCCTCCTCAGGGCAAAGAATGAGCTGAAGAAAAAGGAGGATGACGAGGATGATCTAACCTAAGTTTTGTTGTAAAGCTCGTTTCATGCTTAATATGGTTGCCTCCTTTGCATTCTGGAGGCTCCATGTTCCATATGATGAGCATGAGAGCTGTCGTTTGCCCTGTTGTATAGAACTCCTTCCAGCTATCATATTGGATGTTTGGTTGCACTGGT



gi|117221710|gb|CT852803.1|CT852803 CT852803 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

GTCCAAACATCCGATGTGATA
||||||||||||||||.|||
AAGGTTTGTAGGCTACATTAT

EST sequence (targeted fragment marked with yellow):
CTCAACCGCGCGCACCTGGACTACTTCTACTGGTTGCTCGCCGCGCTCGCCGCTCTGGAGGTGGCCGTGTTCGTCTACCTTGCGCAGCGATACGACTACAGGCACAAATCCAAGCCATGATCGATCGAATTCTTTTCTGATCTTGTATCTTCTTATTTTGGATATGAACAATGGCGTGACATTATCATTTAGAAAAAAAATATCAAACATATTCTTTTAATTGTATGGATATAAAAGAGTAAGAGCTAGGAGTGAATGATGCCGTCGGTTGATTAGCATACATTCGACCCTGTTTAGATAGGACTAAAACTTTTAAGTCCCTATTACATCGGATGTTTGGAAACTAATTATAAATATTAAACGTAGACTATTAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAAAAAAAAAAAAAAAAAGGGCCCCTTGGCCCCCAGGGGGGGGCCGGGCCCCCATTTCCCCCAAAAGGGGGTCTAATTACCCCCCCCCACGGGCCGCTTTTTTAAAACCCGGGGAGGGGAAAAACCCGGGGTTTCCCCAATTAAACCCCTTTGAACAAATCCCCCTTTTCCCCGCTGGGCTAAAAAAAAAAAAGGCCCCCACCATTCCCCTTCCCCAAAATTTCCCCACCTAGAAGGGAAAAGGGGACCCCCCTTTAAGGGGCCTTTAAAGCGGGGGGGGGGGGGGGTTAACGGGAAGGGGGGCCGTCAAATTTTGCAAGGCCCCAAGCCCCCCCCCTTTTTCTTTTTTTTCCTTTCTTTTTTCGCCCGTTTGCGGGTTTTTCCCCTAAAAATTTAAAATGGGGGGGCCCCTTTTTGGGTTCAAATTTGTGGTTTAACGGCCCCCCCCCCCCAAAAAAATTTATAAGGGGGGGGGTTTTACGTAGGGGGGCCCTCCCCCTGAAAAAAGGGTTTTCCCCCTTTTAAGTGGGGAACCCCGTTTTTTTTAAAAGGGGGACTTTTTGTTCCAAAAATGGAAAAAAACACCAACCACTTATCTTCGGGCTTTATTTTTTTGATTTTAAAAAGGGGTTTTGTCCAGTTTTTCCGCCCTTTTGTTGTTAAAAAAAAAAAAGGCATAAATTAAAAAAAAAATAAATACACAGGGAAATTTTTTAAAAAAAAATAAAAATAAAAACCCTTCATAACAAAAATTTTGGGGGGGGGGTTGTTTTTCTTTGGGTGGGGAAGAAAAAGTGGGGGGGGGGGGAAGACCACCCCCCCCCTCTTTTTTGTGTTTTTTTTTTT



gi|86525205|gb|CI165411.1|CI165411 CI165411 Oryza sativa (japonica cultivar-group) shoot and callus Oryza sativa Japonica Group

GTCCAAACATCCGATGTGATA
||||||| |||||||||||||
CAGGTTTATAGGCTACACTAT

EST sequence (targeted fragment marked with yellow):
TTTTTTCCTCATCCTCATTACAAAAAATATCATTGATTTCATGAGTAAACATTACAGCACATAATGCTGATATCTATCAAGAAAAATGAAGTTCTTGTGGGCCATTAGAGGGAACTGGGACATTTGGGTCCGGCTAGCTGTGATATGTGACTGTTAGCAAGGTGGGATGGGTGAGTGAACAAAGAAACCAAAAAAAAAAAAAAAAAAAAAAAAACTCACTGAAACCAGTGAGGATTCAGGAAATAATGCTACTAATCAGATCCCGTGGCGTGGCAACCGCCATCATAGACTAAGACCCTGTTTAGATGGGACTAAAACTTTTTAGTCTCTATCACATCGGATATTTGGACACTAATTATAAATATTAAACGTAGACTATTAATAAAACCCATTATATAACCCTGGACTAATTCGCGAGACGAATCTATTAAGCCTAATTAATTCATGATTAGCCTATGTGATGCTACAGTAAACATACGCTATGTATGGATTAATTAGGCTTAAAAAATTTATCACACGAATTAGCTCTCAT



gi|163928208|gb|EG712536.1|EG712536 Os5MPREST0542 Rice young panicles Oryza sativa Japonica Group cDNA clone 5MPR-C1B09S, mRNA s

GTCCAAACATCCGATGTGATA
.|||||||||| |||||||||
TAGGTTTGTAGACTACACTAT

EST sequence (targeted fragment marked with yellow):
GGCCATTACGGCCGGGGCGCCATTAATGTTGATACTGGTGTTAACAAACAGCTTACTGAGATGATCATGAAGTGGCGTCGCCCTAGGCAGAAATTGGTTGTTGGAAAGCCGGAGTATAAATCAATCATTGAAAATACCTTAGTGAGTAAATATAAGACCCTCTTTTAGATGGGACGAAAACTTTCAAGTCCCTATCACATCAGATGTTTGGATACTAATTATAAATATTAAACGTAGACTATTAATAAAATCCATCCGTAATCTTGGACTAATTCGCCAGACGAATCTATTGAGTCTAATTAATCCATGATTAGCCTATGTGATGCTACAGTAATCATTCTCTAATTATAGATTAATTAGTCTTAAAAAATTTGTCTCGCAAATTAGCTTTTATTTATGTAATTAGTTTTGTAAG



gi|29628541|gb|CB633552.1|CB633552 OSIIEb12H10.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb12H10 3', mRNA sequence

GTCCAAACATCCGATGTGATA
.|||||||||||.||||||||
TAGGTTTGTAGGTTACACTAT

EST sequence (targeted fragment marked with yellow):
CTTTGATCCAAATGCATGTGGCTGGGCTTATGGAATGAACATCTTTGATCTGAAGGAGTGGAAGAAGAAAGATATCACTGGGATCTACCACAAGTGGCAAAGCATGAATGAAGACCGGGTTCTTTGGAAGCTTGGGACACTTCCACCTGGCCTCTTAACCTTCTACAAGTTGACGCATCCCCTTGACAAGTCGTGGCATGTCCTTGGATTAGGATACAACCCAAGCATTGATCGCTCAGAGATAGATAATGCTGCTGTTGTTCATTACAACGGTAACATGAAGCCATGGCTGGAGTTAGCAATGACCAAGTACAGACCATATTGGACAAGGTATATAAAGTATGATCACCCTTACATCCGTGGATGCAACTTGGCGGAGTAGATATGATGTAAAAAGCTGACGGAGAAGATCACCCAGCCTGATCAGAGGTGCTTCTATTAAGTGGAGTAAATACACGGCCGGTGTCAGTTGTTCTGAAAAAAATAAAATGCGTTAACGGTAGCTTTCAGGCTTGCCTGCCGGCTTAATTTTGATGAACCTGTCACTGGAACTTTCTCTCCAGCTGATCGATCGATCACCGCATGAGTTGATGGATCGAATGGATGGTTGAGAGATAATTTTCGGTTTTAATTGCGTCATTGCTGGAATCTGCAACTTTGTCTGCAACCGTGATGTGGGGCGTCTTTTTTCTATGGTGTGCTTGGGCCCTGTTTTTAAGTCCCTATCACATTGGATGTTTGGATACTAATTATAAATATTAAACGTAAACTATTAATAAAAAAAAAAGGAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAGCTTTGTC



gi|88489899|gb|CI427171.1|CI427171 CI427171 Oryza sativa (japonica cultivar-group) callus UVB iradiated callus, 24hr after treat

GTCCAAACATCCGATGTGATA
.|||||||||| |||||||||
TAGGTTTGTAGACTACACTAT

EST sequence (targeted fragment marked with yellow):
CAGCATTCACTTTCGAATTGTATATATATGCAAATGTATGTATAACTCTCTGTACAAGTTTGAGGTCTTCAGACATAAACCATAGCGTGTATTTGTGTCATATAAGGCTGTGTTAGGGAACTAATCCCTCCAACCTGCAAAACAGAATGATTCGTTAGCGCTTGATTAATTAAGTATTAGCCTTTTTCGAAAATGGATTAATATGACTTTTTTTAAACAACTTCCGTATAGTAAATTTTTGAAAAAACTAATCGTTTAATAGCTTGGGAAGCGTGCGCACGAAAAACGAGAGAAGTGAGTTGAGAAAGAAGGGGGAAGAACACGGCCTAAGACCCTGTTCAGATGGGACTAAAACTTTTAAGTCCCTATCACATCAGATGTTTGGATATTAATTATAAATATTAAACATAGATTATTAATAAAACCCATCCATAATTTT



gi|33794110|gb|CF322945.1|CF322945 HDN--02-H24.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library II (HDN) Oryz

GTCCAAACATCCGATGTGATA
|| ||||||||||||||||||
CAAGTTTGTAGGCTACACTAT

EST sequence (targeted fragment marked with yellow):
GCACGAGGGTTCGCTGCGTGGCTCTGGTCGTTCGTCGCGCTGGCGTGGCACACCGTGGTGGACGTCGCGAGCTTCTTCGCCACGACCATGTTCCTCAAGGACCCGCACACGCTGTTCAAGCGGGTGAAGCACGGGGAGTTCCAGCGGAAGCGCATCGTGCACCGGGGGCTTAGCTTTGATGACGTCAAGCTCGTCAAGAACGCCATGAACTGCACAGTCAATGATGTGCTGGTTGGGATCACGTACTCTGCACTGTCACGATATTACTACCGGAAGTCAGGTGACCAATTTTGGCTGATACAGCAGCTGCTGATTGGCTGATAACTTTTTAAGTCCCTATCACATCGGATGTTTGAACACTAATTATAAATATTAAATGTAGACTATTAATAAAACCCATCCATAATCTTGGACTAATTCGCGAGACGAATCTATTGAGCCTAATTAATCCATGATTAACCTATATGATGTTACAGTAAATATTCTCTAATTATAGA



gi|88272367|gb|CI386222.1|CI386222 CI386222 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

GTCCAAACATCCGATGTGATA
|||||||||||||||||||.|
CAGGTTTGTAGGCTACACTGT

EST sequence (targeted fragment marked with yellow):
GTCAAAATAAGACATACCAGTCGTACTTACAATCATTCCAGATTACAGACTAGGGGCTGTTTGGTTTCCAGAGACTTATTCTAAGTCCCTGTCACATCGGATGTTTGGACCCTAATTTGGAGTATTAAACATACACTAATTACATAACCCATTTCATAAGCTTGGACTAATTCGCGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTTGACAACTGTGATGCTACAGTAAACTTTTGATAATTATGGATTAATTAGGCTTAAAAAATTCGTCTGGCGGATTAGCCTCTCATTTATGAAATTAGTTTTTTTATTAGCTCCATGTTTAATACTCTAAATTAGCGTCCAAACATCCGATGTGACATGGGTTAAAAAGTTTTAGCCCCATCTAAACACCCCCGTTTATAGGTACCCGATACCAGAAGGCTCATTA



gi|88997063|gb|CI389729.1|CI389729 CI389729 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

GTCCAAACATCCGATGTGATA
||||||||||||.||||||||
CAGGTTTGTAGGTTACACTAT

EST sequence (targeted fragment marked with yellow):
GTCACGTCAATGCTACTATCTGTTCAATGTGCGGCTACAATCAGTTTAGACCATGTTTAGATGGGACTAAAACTTTCAAGTCCTTATCACATTGGATGTTTGGACACTAATTACAAATATTAAACGTAGACTATTAATAAAACCCATTCATAATCTTAGACTAATTCGCGAGACGAATCTATTGAGTCTAATTAATCCATAATTAGCCTATGTGATGCTACAGTAAACATTCTCTAATTATGGATTAATTAGGCTTAAAAATTTGTCTCGCGAATTAGCTTTCATTTATGTAATTAGTTTTGTAAGTAGTCTATATCTAATACTCTAAATTAGTGTCTAAATATAGGGACTAAAGTTAAGTCCCTGGATCCAAACACCACCCTTAATAGGTCAGTGACATCATCATCTCTTAGATGATTGCGCTGCACACAAAGATCCAGATGGTGGTGCGAAAC



gi|58691897|gb|CK080584.1|CK080584 79418rsicen_3210.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indic

GTCCAAACATCCGATGTGATA
.|||||||||| |||||||||
TAGGTTTGTAGACTACACTAT

EST sequence (targeted fragment marked with yellow):
CTCAACCCTAACTCTGCAAGACGCGCGTCCGCCGCCGCAACTAGCAATGCCCAAGCGGCGTCGCGGGGTTCGCCCCCCTCCTCCCGATCCTTCCCCGGCTCCGGCGACAATCGACTATAGCCTTACTTATAAGGAGATAGCCGCCAGTGGGGCTCCAGGTGCTGTGGACTTTGTGAACAATCATGGCTTGTACTTGCTGCTGCTTGAGACGCCCTCTGGCTTCTCAATTTTCTCTCTTTGTGGGGTCTACATCCACTTACCAGATGCGATACAAAATATTTGGGCGATGTTCGGTACTTACAGGTCTGCACATGACGTTATCTGGCTGAAGGAATTTCAGAAATTTGATGACAAGTCTAGCGCCATTAATGTTGATACTGGTGTTAACAAACAGCTTACTGAGATGATCATGAAGTGGCGTCGCCCTAGGCAGAAATTGGTTGTTGGAAAGCCGGAGTATAAATCAATCATTGAAAATACCTTAGTAAATATAAGACCCTCTTTTAGATGGGACGAAAACTTTCAAGTCCCTATCACATCAGATGTTTGGATACTAATTATAAATATTAAAC



gi|86908862|gb|CI319081.1|CI319081 CI319081 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

GTCCAAACATCCGATGTGATA
|||||||||||.|||| |||
AAGGTTTGTAGGTTACAATAT

EST sequence (targeted fragment marked with yellow):
GTATAAACTATTCATCTTTGAATATGTCACGTCAATGCTACTATCTGTTCAATGTGCGGCTACAATCAGTTTAGACCATGTTTAGATGGGACTAAAACTTTCAAGTCCTTATAACATTGGATGTTTGGAAACTAATTACAAATATTAAACGTAGACTATTAATAAAACCCATTCATAATCTTAGACTAATTCGCGAGACGAATCTATTGAGTCTAATTAATCCATAATTAGCCTATGTGATGCTACAGTAAACATTATCTAATTATGGATTAATTAGGCTTAAAAATTTGTCTGGCGAATTAGC



gi|88513664|gb|CI441170.1|CI441170 CI441170 Oryza sativa (japonica cultivar-group) 4th leaf leaf 3mM SA(salicylic acid) for 1 da

GTCCAAACATCCGATGTGATA
|||||||||||||||||||||
CAGGTTTGTAGGCTACACTAT

EST sequence (targeted fragment marked with yellow):
GCTAAGGGCCTGTTTGGGAAACATGGATTTATTCCCCAAGTCCCTATCACATCGGATGTTTGGACACTAATTTAGAGTATTAAACATACACTAATTACAAAACCCATTCCATAACCTTGGACTAATTCGCGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTGACAATGTGATGCTACAGTAAACTTTTCATAATTATAGATTAATTAGGCTTAAAAAATTCGTCTCGCAGATTAGCTCGCATTTATGAAATTAGTTTTTTTATTAGTCTATATTTAATACTTCAAATTAGCGTCCAAACATCCAATGTGACATGTACTTTAAAAAATAAACACCCCCTAAAATAGTGCCTCCCTTTACATTAGCTGACTTAGTAGAGTATGAACAGAGTTGTTTAAATGGACAC



gi|66914847|gb|CX101695.1|CX101695 RECm2662 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

GTCCAAACATCCGATGTGATA
| ||||||||||||.|||||
AAAGTTTGTAGGCTATACTAT

EST sequence (targeted fragment marked with yellow):
GCAGTCCAGGACTGGAGCTGTGGTCCGGTGGAGGTTATAGAGAAGAAGCAGAGAGCAAGAATGGCTGGGCTGTATGAGAGACCGTCGGAGACGTACACCAAGAAGCGGCCTCGGTACCCTGACGCTTGGTTCTCCAAGCTCGCCGCCCTCACCGCCGGCCACCACCGCGCCTGGGACGCCGGCTGCGGCACCGGCCAGGCCTCCATCAGCATCGCGGAGCACTACGACAGCGTGGTCGCGACGGACGCGAGCGAGGGGCAGATCCGCCACGCCGTCGCGCACCCCAAGGTGCGGTACCTGCACACCCCGGTGGACCTCTCCGAGGACGACCTCGTCGCCATGGTCGGCGGCGAGGGCTCGCTGGACCTCGTCGTGGTGGCGACCTCCATCCACTGGTTCGACATCCCGCTCTTCTACGCCGTGGCCAACCGCGTCCTCAAGAGGCCCGGCGGCGTCCTCGCGGTGTGGGGCTACAACTACGAGATCCACCCGTTCGAGGACAAGCTGCACGGCCAGCTGTACCCGGCCATGCGCCCGTATATGGACCCGAGGACGAGGCTGGCCATGGACAGGTACCGCGACCTGCCGTTCCCGTTCGAGCCCGTCGGCGTGGGCCGCGAGGGCGAGCCGGCCGACGTCGACATAGAGGTGGACATGACGCTGGACGACCTCGTCGGGTTCCTGAAGAACGGCTCCGTCGTGACGACGGCGAGGGAGAAGGGAGTAGACCTGGAGGCGGTGACCAAGGACGTGATGAAGGGGGTGGAGGCGGAGTGGGGAGACCCGGCGGTGGCGAGGAAGCTCGTGTTCAAGGCCTTCATGCTCGCCGGGAAGCCCAAAGTGCTGAACTGAAACGTACGCTGAACCGCTGATTGCTGATCATTGGTCAACCGCGTCTTGTTTCGTTGCGATAGATTGGTGACTTCACCAGAATAAATTCCGGAGAGACGACTGAGGCCCTGTTTAGATGAAACTATTTTTAAGTCCCTATCATATCGGATGTTTGAAAATTAATTTTTAATAT



gi|88261570|gb|CI365146.1|CI365146 CI365146 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone

GTCCAAACATCCGATGTGATA
|||| ||||||| |||| |||
CAGGGTTGTAGGGTACAATAT

EST sequence (targeted fragment marked with yellow):
GAATATGTCAGGTCAATGCTACTATCTGTTAAATGTGGGGGTACATAAGTTTAGACAATGTTTAGATGGGACTAAAACTTTCAGGTCCTTATAACATGGGATGTTGGGACACTAATTACAAATATTAAACGGTAGACTATTATTAAAACCCATTCATAATCTTAGACTAATTGGGGAGACGAATCTATTGAGTCTAATTAATCCATAATTAGCCTATGTGATGCTACAGTAAACATTCTCTAATTATGGATTAATTAGGCTTAAAAATTTGTCTCGGGAATTAGCTTTCATTTATGTAATTAGTTTTGTAAGTAGTCTATATCTAATACTCTAAATTAGTGTCTAAATATAGGGACTAAAGTTAAGTCCCGTGGATCAAACACCACCTTAATAGGTCAGTGACATCATCATCTCTTAGATGAT



gi|29632073|gb|CB637082.1|CB637082 OSJNEa03D21.r OSJNEa Oryza sativa Japonica Group cDNA clone OSJNEa03D21 3', mRNA sequence

GTCCAAACATCCGATGTGATA
. ||||||||||.||.|||||
TTGGTTTGTAGGTTATACTAT

EST sequence (targeted fragment marked with yellow):
GTTTTTGAGATGGTAACTCGTTCATATTTTATTTCAGATACCAGAAGGCAAATGAGATATTTGAAGCAATTGCTCGCCAACAAATCAACAATAATCTTCTTAAGTACAGTGTCAGAGGTATTCTCCTCAACGCAGGCATTTGTCAGCTATGCAGAGGTGATGTTGTTGCTATCACAAATTCAATGGAGCGATATCAGGATATTGACCCAACATTCTCGGGGACACGAGAATACAAGCTTTTATCTGATCTTGCTGCAGCTATGGAGGAAGGAGATGTTGCCAAGTTCACTGATGCCATTAAGGAATTTGACAGCATGACACGTCTGGACCCCTGGAAAACAACCCTCCTCCTCAGGGCAAAGAATGAGCTGAAGAAAAAGGAGGATGACGAGGATGATCTAACCTAAGTTTTGTTGTAAAGCTCGTTTCATGCTTAATATGGTTGCCTCCTTTGCATTCTGGAGGCTCCATGTTCCATATGATGAGCATGAGAGCTGTCGTTTGCCCTGTTGTATAGAACTCCTTCCAGCTATCATATTGGATGTTTGGTTGCCCTGGTTCTTTTCTGGNCCACCACCTGATTTGCCGTCAGTGTTTAAACTAGTACCCTACGTGTGTTGCTGATACCTTATATTATAACATGTTTGTTTCAGCCTGC



gi|88222462|gb|CI222418.1|CI222418 CI222418 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s

GTCCAAACATCCGATGTGATA
|| |||||||| |||||||.
CAAGTTTGTAGACTACACTGA

EST sequence (targeted fragment marked with yellow):
TTTTTGCTTATCAAAAATAGAATTTTCATAGAATTTTCAGATTTGAAAATATGCTTATACGGAGGGAGGGAGTACTACTCATAGCACGACATAAAAATACTACTACTTTTCACTGAAACAGTGTAGCACACGGATTGACATGCAAAGATTCCTATAGCCAAAACTTTTCCAAACTACTGCTATTATTCACCGAAACCGACTGCTATGACTGTCACCGAAACCGACTGCTTTGACGATCGGATTCACATCCCACAGCCAACAACAAATCAAGTCAATAGCAAACAACATGCAACCAGTGGCAATCATCAAATTTGCTGGCAATCAGAACAGCGAGATAGCAGAAGTCGCCGGATTTGCTTAGCAGCTCCAAATCATCAAATTTGCTGGCAATCAGAACAGCGAGATAGCAAAAGTCGCCGGATTTGCTTAGGGGGTGTTTAGATGGGGCTAAAACTTTTTAGCCCAAGTCACATCAGATGTTTGAACGCTAATTTAGAGTA



gi|40487470|gb|BX898480.1|BX898480 BX898480 Oryza sativa library (Han B) Oryza sativa cDNA clone y680g12p5, mRNA sequence

GTCCAAACATCCGATGTGATA
|||||||||||||||||| ||
CAGGTTTGTAGGCTACACAAT

EST sequence (targeted fragment marked with yellow):
CATTATGGCCGGGATATAAGGTGAAACAAGCCAATTAAACGACCGAAAGATTTTCGATATACTTAGTGAAACAATTCCGATATACTTGGTGGAACAGCGTGCAGCATATAAAAATAATTCAATAATAAGCTAAAAAAAATTTCATCGGAATATATCCATGTGTGATCTTGTTTTAAAGATTTAATTGCAACGAATTTAATGGTGCAATCATATCATGATTTGGATAAATAATTTAAGAATAAAAATAGTTTAATGTGGTTTTGCACGTATGCGTTATGCTGACATCAGCACCCGGTTTTTCTCTCTCCTCATCGGGCGCCCGATCCTGAGTTGCCTCAAAAATAAACTCATGAAGTTATCTGAAGGGCTGTTTGGGAAACAGGGACTTATTCCAAATACCTAACACATCGGATGTTTGGACACTAATTTGAAGTATTAAATATAGACTAATTATAAAACACATTCCATAACATTAGACTAATTCGCGAGACAAATTTTTTGAGCCTAAATACGCCATGATTTAATAATATGATACTACAGTAAACTTTTGATAATTATGGATTAATTAGGTTTAAAAAATTCGTCTCGCCGATTTACTTCAATTATAAACTTGATTTTTATTAGCTAAGTTAGTACTTAACTTCGTCAATATCGAGTTCACGTCTAA



gi|88830300|gb|CI076556.1|CI076556 CI076556 Oryza sativa (japonica cultivar-group) NAA treated callus Oryza sativa Japonica Grou

GTCCAAACATCCGATGTGATA
||||||||||||||||||.|
AAGGTTTGTAGGCTACACTGT

EST sequence (targeted fragment marked with yellow):
GGTGCCAAAATAAGACATACCAGTCGTACTTAAAATCATTCCAGATTACAGACTAGGGGCTGTTTGGTTTCCAGAGACTTATTCTAAGTCCCTGTCACATCGGATGTTTGGAATTCAGGTATCTAATGCAACAAGAGCCAAGGGAGCAACCTTACCTGTCATAGCCACCACCACCGGCTTGGCGTCCATAGCCTCTCTCAGGCATCCGGTAGGGAGAATACGGCAATGATCTAGATCGCTCCCTCCGGGCCCTGCCACCGCCATAAGGAGGAGATCTATGTGGGGAGTATCCCCTGCCTCCCCTTCCGTCGTAGTAATCTCGAGCATCCCTGTGGGGGGAGTAGTCCCTTGTGTCCCTGTATGGAGGGTAGTCCCTTGTGTCCCTGTAGGATGGGTACATTGGAGGCGGAGACCTGCGGTAGCTATTGCCGTAGTACTCATCACGGCCATAGCCACCTCCTCTGCTGCGGTATCTCCCACGTGGCTCTCTACGGTCATATCG



gi|58030768|gb|CX728311.1|CX728311 OSJNEf04C18.r OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf04C18 3', mRNA sequence

GTCCAAACATCCGATGTGATA
. ||||||||||.||.|||||
TTGGTTTGTAGGTTATACTAT

EST sequence (targeted fragment marked with yellow):
CCTCAACGCAGGCATTTGTCAGCTATGCAGAGGTGATGTTGTTGCTATCACAAATTCAATGGAGCGATATCAGGATATTGACCCAACATTCTCGGGGACACGAGAATACAAGCTTTTATCTGATCTTGCTGCAGCTATGGAGGAAGGAGATGTTGCCAAGTTCACTGATGCCATTAAGGAATTTGACAGCATGACACGTCTGGACCCCTGGAAAACAACCCTCCTCCTCAGGGCAAAGAATGAGCTGAAGAAAAAGGAGGATGACGAGGATGATCTAACCTAAGTTTTGTTGTAAAGCTCGTTTCATGCTTAATATGGTTGCCTCCTTTGCATTCTGGAGGCTCCATGTTCCATATGATGAGCATGAGAGCTGTCGTTTGCCCTGTTGTATAGAACTCCTTCCAGCTATCATATTGGATGTTTGGTTGCCCTGGTTCTTTTCTGGCCACCACCTGATTTGCCGTCAGTGTTTAAACTAGTACCCTACGTGTGTTGCTGATACATGATATTATAACATGTTTGTTTCACCTGCTTTCGTCAAATAAGG



gi|58597297|gb|CK007825.1|CK007825 32766rsicef_4417.y1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica G

GTCCAAACATCCGATGTGATA
.|||||||||| |||||||||
TAGGTTTGTAGACTACACTAT

EST sequence (targeted fragment marked with yellow):
GCACGAGCTCAAACCCTAACTCTGCAAGACGCGCGTCCGCCGCCGCAACTAGCAATGCCCAAGCGGCGTCGCGGGGTTCGCCCCCCTCCTCCCGATCCTTCCCCGGCTCCGGCGACAATCGACTATAGCCTTACTTATAAGGAGATAGCCGCCAGTGGGGCTCCAGGTGCTGTGGACTTTGTGAACAATCATGGCTTGTACTTGCTGCTGCTTGAGACGCCCTCTGGCTTCTCAATTTTCTCTCTTTGTGGGGTCTACATCCACTTACCAGATGCGATACAAAATATTTGGGCGATGTTCGGTACTTACAGGTCTGCACATGACGTTATCTGGCTGAAGGAATTTCAGAAATTTGATGACAAGTCTAGCGCCATTAATGTTGATACTGGTGTTAACAAACAGCTTACTGAGATGATCATGAAGTGGCGTCGCCCTAGGCAGAAATTGGTTGTTGGAAAGCCGGAGTATAAATCAATCATTGAAAATACCTTAGTAAATATAAGACCCTCTTTTAGATGGGACGAAAACTTTCAAGTCCCTATCACATCAGATGTTTGGATACTAAT



gi|88970890|gb|CI385455.1|CI385455 CI385455 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

GTCCAAACATCCGATGTGATA
||||||||||||.||||||||
CAGGTTTGTAGGTTACACTAT

EST sequence (targeted fragment marked with yellow):
GAAGCGAAGAGTTAGTTGTATAAACTATTCATCTTTGAATATGTCACGTCAATGCTACTATCTGTTCAATGTGCGGCTACAATCAGTTTAGACCATGTTTAGATGGGACTAAAACTTTCAAGTCCTTATCACATTGGATGTTTGGACACTAATTACAAATATTAAAGGTAGACTATTAATAAAACCCATTCATAATCTTAGACTAATTCGCGAGACGAATCTATTGAGTCTAATTAATCCATAATTAGCCTATGTGATGCTACAGTAAACATTCTCTAATTATGGATTAATTAGGCTTAAAAATTTGTCTCGCGAATTAGGTTTCATTTATGTAATTAGTTTTGTAAGTAGTCTATATCTAATACTCTAAATTAGTGTCTAAATATAGGGACTAAAGTTAAGTCCCTGGATCCAAACACCACCTTAATAGGTCAGTGACATCATCATCTCTTAGA



gi|88971968|gb|CI390551.1|CI390551 CI390551 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

GTCCAAACATCCGATGTGATA
||||||||||||.||||||||
CAGGTTTGTAGGTTACACTAT

EST sequence (targeted fragment marked with yellow):
GGGACTAAAACTTTCAAGTCCTTATCACATTGGATGTTTGGACACTAATTAAAAATATTAAACGTAGACTATTAATAAAACCCATTCATAATCTTAGACTAATTCGCGAGACGAATCTATTGAGTCTAATTAATCCATAATTAGCCTATGTGATGCTACAGTAAACATTCTCTAATTATGGATTAATTAGGCTTAAAAATTTGTCTCGCGAATTAGCTTTCATTTATGTAATTAGTTTTGTAAGTAGTCTATATCTAATACTCTAAATTAGTGTCTAAATATAGGGACTAAAGTTAAGTCCCTGGATCCAAACACCAACTTAATAGGTCAGTGACATCATCATCTCTTAGATGATTGCGCTGCACACAAAGATCCAGATGGTGGTGCTAAACTCGTATTGCCGATAACCCAGTAGAGGACCCAGTT



gi|88722953|gb|CI746463.1|CI746463 CI746463 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

GTCCAAACATCCGATGTGATA
| ||||||||||||||||||
AAAGTTTGTAGGCTACACTAT

EST sequence (targeted fragment marked with yellow):
GTGATAAATTAGATGTTACTGATTGAATGTGTGCTCTTGTATGATCATCACATGTGGTATATATCCAGTTGAATAATTCGTCTTATAGTTTTAGATGGATTTTCCATCAGAATGGCTTTTTCTTGGTGAGGTCTATATACCTAGCTTTAATTAATAATGGCTATATCAAGAGAAATAAGGTCCTGTATAGATGGGACTAAAACTTTTAAGTCCCTATCACATCGGATGTTTGAAAATTAATTATAAATATTAAACGTAGACTATTAATAAAACCCATCCATAATCTTGGACTAATTTGCGAGATGAATCTAATGAGCCTAATTAATCCATGATTAGCCTATGTGATGCTACAGTAAACATTCT



gi|88996837|gb|CI389503.1|CI389503 CI389503 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

GTCCAAACATCCGATGTGATA
||||||||||||| |||||.|
CAGGTTTGTAGGCCACACTGT

EST sequence (targeted fragment marked with yellow):
TTGACTAAATGTGAATAAATTTTAACCAAATTCTTACATAAAAATATGAACAACCAAAAATTCCGTACAAGATATTTGCTTGCCGGTGTGAGTTCGGAGGGATTTCCGAAATTACTGAAATTACTTTCAGATATTTCGAACTGAAATTTTAAACCTGGTAGCAAAAAACTAAGGGGGTGTTTGGGAATTAGGGACAAAAATTTAGTCCCTGTCACACCGGATGTTTGGACGCAAATTTAGAGTATTAAACATAGATTAATTATAAAATACATTTCATAACCTTGGACTAATTCGCGAGACAAATCTTTTGAGCCTAATTAATACATGATTAGCCTATGTGATGCTACAGTAAAGATTTGCTAATTATGGATTAATTAGGCTTAAAAAATTCGCCTCCTGGATTAGTTCTCATTTATGAAATTAGT



gi|58668344|gb|CK057030.1|CK057030 56808rsicek_11981.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G

GTCCAAACATCCGATGTGATA
| |||||||| |||||||.|
AAAGTTTGTAGACTACACTGT

EST sequence (targeted fragment marked with yellow):
CCCCCGGGCTGCAGGAATCGGCACGAGGCTTTGGTCCAATGCCCACTCAAACAAACAAACGAAAAAAAAAGCTCTATAAAATCGAACATGGGTCAAATTTATCCAAATAAACAAAAAAGAAGCTCTATAAAATCGACAATGAGTCAAATTTATCGTGTCTATCATTTGTAGGAAAAAGTACACTTTGACTCCCTCAACTATGACCCGAGTAAAACCAGGTATTTCAAAAGTGGTGAAACCCGTGTAAAACGACTACTTGAGTAGTATAGTAGGTGGTTTCATCTGATGTGGCCATTTAACCCTAGTCAACATACTGAATCAGCAGACGATTTTTGACCGCACGTGCTAAGGTGGTGTTTGGATCCAGGGACTATGTCACATCAGATGTTTGAAAATAGATTACTTACAAAACTAATTGCAT



gi|88269938|gb|CI381236.1|CI381236 CI381236 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

GTCCAAACATCCGATGTGATA
|||||||||||.| .|||.|
AAGGTTTGTAGGTTCTACTGT

EST sequence (targeted fragment marked with yellow):
AATAACGAATAGTGCCCTATTCAGCCCTTTTTTTTTTACACTTGGCCTCTCACCCGCATAATATGAGGTATCAGCGGTAGGGTGATTGTTTTTCAAAAAAAGGAAAAAGAAAAAGGAAAAAAAAGCGGTGGGGGTGATTGCGAGAAACCGCATAATATGTTTTAGGACTTTGGACGGTAGATGTTGGCAGGTTGGTGGTATACATGAACATTTTGCCCACGAATAATGCTAAGTCAGGCACACCTCATGCTAGCAGAGGTTGCAATAACTAACAAAAACTCAAGATGCATTACTCCTACTGAACATGACGAGTAGGCCTCCACTGTCTCCAATTAGCCTGAAGGAATGTCATCTTGGATGTTTGGAATCACTCCCTGAAGCAGGCTCTGAGCTTTGTCAGCCTGCTGCGGACGTACCTACTATCGAAAAACTTTTTCTAT



gi|88994154|gb|CI116118.1|CI116118 CI116118 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo

GTCCAAACATCCGATGTGATA
|| |||||||| |||||||.
CAAGTTTGTAGACTACACTGA

EST sequence (targeted fragment marked with yellow):
CTTTTTTTTTTTTTTTACATAAAAATACTACTACTTTTCACTGAAACAGTGTAGCACACGGATTGACATGCAAAGATTCCTATAGCCAAAACTTTTCCAAACTACTGCTATTATTCACCCGAAACCGACTGCTATGACTGTCACCGAAACCGACTGCTTTGACGATCGGATTCACATCCCACAGCCAACAACAAATCAAGTCAATAGCAAACAACATGCAACCAGTGGCAATCATCAAATTTGCTGGCAATCAGAACAGCGAGATAGCAGAAGTCGCCGGATTTGCTTAGCAGCTCCAAATCATCAAATTTGCTGGCAATCAGAACAGCGAGATAGCAAAAGTCGCCGGATTTGCTTAGGGGGTGTTTAGATGGGGCTAAAACTTTTTAGCCCAAGTCACATCAGATGTTTGAACGCTAATTTAGAGTATTAAACATAGACTAATAAAAAAACTAATTTCATAAATGAGAGCTAATCCGTGAGACGATTTTTTTAAGCCTAATTAATCCATAATTATCAAAAGTTTACTGTAGCATCACATTGTCAAAATCATGACATA



gi|88458770|gb|CI558431.1|CI558431 CI558431 Oryza sativa (japonica cultivar-group) root of seedling in anaerobic condition for 3

GTCCAAACATCCGATGTGATA
||||||||||||.||||||||
CAGGTTTGTAGGTTACACTAT

EST sequence (targeted fragment marked with yellow):
CGGGACTAAAACTTTCAAGTCCTTATCACATTGGATGTTTGGACACTAATTACAAATATTAAACGTAGACTATTAATAAAACCCATTCATAATCTTAGACTAATTCGCGAGACGAATCTATTGAGTCTAATTAATCCATAATTAGCCTATGTGATGCTACAGTAAACATTCTCTAATTATGGATTAATTAGGCTTAAAAATTTGTCTCGCGAATTAGCTTTCATTTATGTAATTAGTTTTGTAAGTAGTCTATATCTAATACTCTAAATTAGTGTCTAAATATAGGGACTAAAGTTAAGTCCCTGGATCCAAACACCACCTTAATAGGTCAGTGACATCATCATCTCTTAGATGATTGCGCTGCACACAAAGATCCAGATG



gi|86599102|gb|CI355719.1|CI355719 CI355719 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone

GTCCAAACATCCGATGTGATA
||||||||||||.||||||||
CAGGTTTGTAGGTTACACTAT

EST sequence (targeted fragment marked with yellow):
GTATAAACTATTCATCTTTGAATATGTCACGTCAATGCTACTATCTGTTCAATGTGCGGCTACAATCAGTTTAGACCATGTTTACATGGGACTAAAACTTTCAAGTCCTTATCACATTGGATGTTTGGACACTAATTACAAATATTAAACGTAGACTATTAATAAAACCCATTCATAATCTTACACTAATTCGCGAGAAGAATCTATTGAGTCTAATTAATCCATAATTAGCCTATGTGATGCTACAGTAAACATTCTCTAATTATGGATTAATTAGGCTTAAAAATTTGTCTCGCGAATTAGCTTTCATTTATGTAATTAGTTTTGTAAGTAGTCTATATCTAATACTCTAAATTAGTGTCTAAATATAGGGACTAAAGTTAAGTCCCTGGATCCAAACACCACCTTAATAGGTCAGTGACATCATCATCTC



gi|58682111|gb|CK070798.1|CK070798 66869rsicem_25823.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G

GTCCAAACATCCGATGTGATA
||||||||||| |||||||.|
CAGGTTTGTAGACTACACTGT

EST sequence (targeted fragment marked with yellow):
GCTGCAGGAATCGCACGAGGCCTACCGGATGCCTGAGAGAGGCTATGGACGCCGAGCCGGTGGTGGTGGCTATGACAGGTAAGGTTGCTCCCTTGGCTCTTGTTGCATTAGATACCTGAATTCCAAGCTGGAAAACGTGCTGTTCCTGTTAGCCCTGATGAATGTTAGATTGCTGTAGCTTTGTACTATTTGAAAGATGCATTCCTGGATTTAATGAACGTTGTTGTATGGGGTACCTATAGACGGGGGTGTTTAGATGGGGCTAAAACTTTTTAACCCATGTCACATCAGATGTTTGGACGCTAATTTAGAGTATTAAACATGGACTAATAAAAAAACTAATTTCATAAATGAGAGCTAATCCGCGAGACGAATTTTTTAAGCCTAATTAATCCATAATTATCAAAAGTTTACTGTAGCATTACATTGTCAAAATCATGGCGTAATTAGACTCAAAAGATTTGTCTCGCGAATTAGTCCAAGCTTATGAAATGGGTTATGTAATTAGTGTATGTTTAATACTCCAAATTAGTGTCCAAACATCCGATGTGACAGGGACTTAGAATAAGTCTCTGGAAACCAAACAGCCCCTATATAGTCTGTAATCTGGAATGATTTTAAGTACGACTGGTATGTCTTAAAAAAAAAAAAAAA



gi|58690251|gb|CK078938.1|CK078938 79155rsicen_26381.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indi

GTCCAAACATCCGATGTGATA
| |||||||| |||||||.|
AAAGTTTGTAGACTACACTGT

EST sequence (targeted fragment marked with yellow):
CCCGGGCTGCAGGACAGGTATTTCAAAGTGGTGAAACCCGTGTAAAACGACTACTTGAGTAGTATAGTAGGTGGTTTCATCTGATGTGGCCATTTAACCCTAGTCAACATACTGAATCAGCAGACGATTTTTGACCGCACGTGCTAAGGTGGTGTTTGGATCAAGGGACTATGTCACATCAGATGTTTGAAAATAGATTACTTACAAAACTAATTGCATAAATAAGAGCTAATTCGCGAGACATTTTTTTAAGCCTAATTAATCAATAATTAGCACATGTTTACTATAGCATCACATAGGCTAATCATGGATTAATTAGGCTCAATAGATTCGTCTCGCAAATTAGTCCAGGGTTATGGAATAGGTTTTATCATTAGCCTATGTTTAATACTTCTAATTAGTGTCCCAAACATCCGATATGATAGGGACCAAAAATAAGTCCCTGGATCCAAATAGGGGTGGTCTAAGTAAGCTGCGATTTCGATTAAGGATGCTTGCCTCCCTGGCCCTCTCTCAGTCTCACACTTGTTGAGTTGTGATCCAAATTCATTTGCACTTAATAAAGGCCAGCTTCTGCCGTAGTGGAGCGGAGGCCCATCGCCGGATGGTGACAAACTGAAACAGCCTCCT



gi|29623262|gb|CB628273.1|CB628273 OSIIEb03L19.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb03L19 3', mRNA sequence

GTCCAAACATCCGATGTGATA
||||||| |||||||||||.|
CAGGTTTATAGGCTACACTGT

EST sequence (targeted fragment marked with yellow):
GCATGGTCGGCGATGTCGTAGCCGCCGGATCCGGCTATCTCTATCGAGTCCAGTCGCTTTTTGGCGAGGCGCTGCCGCGACCGCCGCCGGATCGGGGTCGTCCATCGCCGTCGCGAGCGCCGTGTGGCTCTCACGTCGTTGGGGGCTGCCGAAGCCGAGCGGGGAAGCACGTGCGCGATCTCCGGTTAGTTGAAGAGGACGGGGGTGGCGCGGCCCTTGATGGCACGGCGGTGGCAAACGTGCAGAGCCAGATGCGCGAGTTCTTGCGCAGCTCTCAGATCTCCGACACCCACTTGCCCCAACTCCACATGCTGCTGCTAGATCCAACGGGCGGCGAGCTTCGTCGGTGGAGAGCTTTTGCGCCGACTGCTCGAGCATCCAGCAAAATGTAAGGTGGAGGTGGTGCGGTGGTTGGGTCACGGATCGGCCAGGGTGGCGAGCCTGGGGGAATTGGCAGGCAGGCAAAGGAGGGAAAGACGGGCCAAACATTAAAAAAAAATAAAGGTTGCCAGTGGAAGAAAACAAACTGTAGAAGGCAAATCCGGTGACTTGGAGCTGCTAAGGGGCTGTTTGGTTTCCAGGGACTTATTCCAAGTCCATGTCACATCGGATATTTGGACACTAATTTGGAGTATTAAACATACATTAATTACAAAACCTATTCCATAAGCTTGGACTAATTCGCGAGACGAATCTTTTGAGTCTAATTATGTCATGATTTTGACAATGTGATGCTACAGTAAACTTTTGATAAAAAAG