| mature miRNA: GTTCAAAAGATTCGTCTCGTG species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|88508195|gb|CI435701.1|CI435701 CI435701 Oryza sativa (japonica cultivar-group) callus suspension-cultured cells treated with GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): GAAAAAACAATTGCACAGTTTGCATGTAAATTGTGAGACGAATCTTTTGAGCCTAATTACGCTATGATTTGACAATATGGTGATACAGTAAATATTTGCTAATGATGGATTAATTAGGCTTAATAAATTCGTCTCACAGTTGATAGACGGAATTTATAATTTGTTTTGTCATNAGTCTATGTTTAATACTTAAAATGTGTGTCCGTATACGTCAAAAAAAAATTGGGTATCTAACTAAACACGGCCTTGGTATGTTATGCTGGNGACCTGTTGTCACCTACT | |||||||||
gi|86545515|gb|CI185721.1|CI185721 CI185721 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTGTGAGACGAATCTTTTGAGCCTAATTACGCTATGATTTGACAATATGGTGATACAGTAAATATTTGCTAATGATGGATTAATTAGGCTTAATAAATTCGTCTCACAGTTGATAGACGGAATTTATAATTTGTTTTGTTATTAGTCTATGTTTAATACTTAAAATGTGTGTCCGTATACGTCAAAAAAAAATTGGGTATCTAACTAAACACGGCCTTGGTATGTTATGCTGGCGACGTGTTGTCAGCTAGTACAATCAAAATCAAGTGTAGGTGTTGGCGACGTCGGCGAGGTGCCCGGCGAGCTCCACCGGCGCGGAGAACATGGCCATGTGGTCGGCGCCGGCGATCTCCCTCACCTCCTCTACGGGGCAGCCGGCGATCATCCGCCGCTGGTAGGCCTCCACGATGGCCTGGTCCTTCCCGCAGACCACGTACACCTTGCTCACCGCGCC | |||||||||
gi|88240081|gb|CI239243.1|CI239243 CI239243 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTGAGAGCGTGAAGTCTACTCTTCCCGATTTGGGCTGTGTTTAGATTCAACTTTTTTCTTCAAACATCCAAAAATTCCGTCACATCAATTATTTGGACACATGCATGGAGCATTAAATGTGGACGGGAAAAACAATTGCACAGTTTGCATGTAAATTGTGAGACGAATCTTTTGAGCCTAATTACGCTATGATTTGACAATATGGTGATACAGTAAATATTTGCTAATGATGGATTAATTAGGCTTAATAAATTCGTCTCACAGTTGATAGACGGAATTTATAATTTGTTTTGTTATTAGTCTATGTTTAATACTTAAAATGTGTGTCCGTATACGTCAAAAAAAAATTGGGTATCTAACTAAACACGGCCTTGGTATGTTATGCTGGCGACGTGTTGTCAGCTAGTACAATCAAAATCAAGTGTAGGTGTTGGCGACGTCGGCGAGGTGCCCGGCGAGCTCCACCGGCGCGGAGAACATGGCCATGTGGTCGGCGCCGGCGATCTCCCTCACCTCCTCTACGGGGCAGCCGGCGATC | |||||||||
gi|29642237|gb|CB647244.1|CB647244 OSJNEb10B13.r OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb10B13 3', mRNA sequence GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): GATGGTGGTGAAGGAGACGCTGCGGCTGCACCCGCCGGCGACGCTGCTGATGCCGCGGGAGACGATGCGCGACGTGAGGATCGGCGGGTACGAGGTGGCGGCGAGGACGCGGGTGATGGTGAACGCGTGGGCGATCGGGAGGGACGCGGCGAGGTGGGAGGAGGCGGAGGTGTTCGACCCGGACAGGTTCGAGGCGAAGCGGGTGGAGTTCAACGGCGGGCACTTCGAGCTCCTGCCGTTCGGGTCGGGGCGGCGGATCTGCCCCGGCATCGCCATGGGCGCCGCCAACGTGGAGTTCACGCTGGCCAACCTGCTGCACTGCTTCGACTGGGCGCTGCCGGTGGGGATGGCGCCGGAGGAGCTGAGCATGGAGGAGTCCGGCGGCCTCGTGCTCCACAGGAAGGCGCCCCTCGTGCTCGTGCCCACTAGATACATACAACTATAGGAGTACAAATGAAATGGAATTTAGCTAGTAGCAAAGCCGCGACTTCGGCCTTGATTAGTTCCTAAATTATTTTTTTTCCAAAAACGTCACCTCCAATCTTTGGATATATATATATAAAATATTAAATATAAATAAAATAAAAAATTAATTGCACAGTTTGTATGAAAATCACGAGACGAATCTTTTGAACCTAACTAGTCCATGATTAGCCATAAGTGTTACAGTAACCCATATGTACTAATGATGGATTAATTATGCTTAATAATTTCATCTCGTGGTTTTCAGGCGAGTTATGAAATTAGTTTTTCATTCGTATCCGAAAACTCCTTCCAATATTCAGTCAAAAAAGG | |||||||||
gi|40487470|gb|BX898480.1|BX898480 BX898480 Oryza sativa library (Han B) Oryza sativa cDNA clone y680g12p5, mRNA sequence GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): CATTATGGCCGGGATATAAGGTGAAACAAGCCAATTAAACGACCGAAAGATTTTCGATATACTTAGTGAAACAATTCCGATATACTTGGTGGAACAGCGTGCAGCATATAAAAATAATTCAATAATAAGCTAAAAAAAATTTCATCGGAATATATCCATGTGTGATCTTGTTTTAAAGATTTAATTGCAACGAATTTAATGGTGCAATCATATCATGATTTGGATAAATAATTTAAGAATAAAAATAGTTTAATGTGGTTTTGCACGTATGCGTTATGCTGACATCAGCACCCGGTTTTTCTCTCTCCTCATCGGGCGCCCGATCCTGAGTTGCCTCAAAAATAAACTCATGAAGTTATCTGAAGGGCTGTTTGGGAAACAGGGACTTATTCCAAATACCTAACACATCGGATGTTTGGACACTAATTTGAAGTATTAAATATAGACTAATTATAAAACACATTCCATAACATTAGACTAATTCGCGAGACAAATTTTTTGAGCCTAAATACGCCATGATTTAATAATATGATACTACAGTAAACTTTTGATAATTATGGATTAATTAGGTTTAAAAAATTCGTCTCGCCGATTTACTTCAATTATAAACTTGATTTTTATTAGCTAAGTTAGTACTTAACTTCGTCAATATCGAGTTCACGTCTAA | |||||||||
gi|29630432|gb|CB635441.1|CB635441 OSIIEb15N08.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb15N08 5', mRNA sequence GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): ACAAAGGCATGGTTTATATTTAAACTTTTTTCTTCAAACTTTCAACTTTTCCGTCACATCAAATGTTTGAATACATATATGGAGCATTAAATATGGACGAAAAAAACCAATTACACAGTTTGCATGTAAATTGCGAGACGAATCTTTTGAGCCTAATTACGTCTTGATTTGACAATGGGGTGCTACAGTAAACATTTGCTAATGACGAATTAATTAGGCTTAATAAATTCGTCTCGCAGTTTACAGGCGAAATCTGTAATCTGTTTTGTTATTAGTCTACGTTTAATACTTCAAATGTGTCCGTATACTTCAAAAATTTTATTTTGGCACACGAACTAAACACAGCCAAACTCAACAAAATTATTCAGCAATGTTATCTCTACAAAAAATGATGCAGCATTTGGCAGTGCTAAATTCCGCTTGAATCCCTCCCAAATATGAACCTCCGAGTCCAGTCGGATACCACCAACATCCGTGTGCGCCAACTCACTTGTTTGCTTGCATATACAGAGTACCAAAGCCACTGAGTGCTATGGCCCATGGAAACCCAGTCCCCTGGGAGCTCTGCAACAGCTTGCTCTCCACCCAAGGGTGCAAATTGCCCAAAATGCTTGTACCGGAATGGGCGGAAATTGTGCCGACCTGATCCTGTTCCTGTCATGCGCAACGGACCTTCTGGATGTTCTTTGCATTGGTCCATCTTGTTAAAACATTCAACAAGATAGTGTCCTTGTTGTGC | |||||||||
gi|86259685|gb|CI065558.1|CI065558 CI065558 Oryza sativa (japonica cultivar-group) BAP treated callus Oryza sativa Japonica Grou GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): CGAACACAAATTAAAAAACTAATTTCATAACTCGCCTGGAAACCGTGAAACGAATCTTTTGAGACTAATTAATCCACCATTAGCACATGTGGGTTACTGTAGCACTTATGGCTAATCATGGACTAATTAGGCTCAAAAGATTCGTCTCGTGATTTCCATCATAACTGTCCAATTAGTTTTTTTTATCTATATTTAATGCTCCATACATGTCTACAAGGATTCGATGTGATTTTTTTGAGAAAAACTTTTTGGGAACTAAACATGCCCTAAATGTTCAGTTTACTGTGAACAGGAACGCGAAAACGACCGCTACACTTCAACAACGTCAACCTCCGACAACTCAACGCTGGAGACACCATCGGGGCAGAGGATCGACAGCACGCTGACCGTCTTGTGCTGTGGAATCTGACTTATCTTGAGCCGATCTTCATCGCTCAATTGCCAATCGAAGATATCGATGTTCTCCTTAAGCCTCTCCCTTTTCGTACTCGTGGTCACCATGCTTGCTCCTTGCTCGTAGATCCACCTAAGTGAGATCTGAGCC | |||||||||
gi|117252265|gb|CT844368.1|CT844368 CT844368 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): GACGTGAATCCAACATTCCAACTCGAAAGTATACCTACCACCTGGCAAACTTGAGCAGACCCGGCTGCCGTTTTATGCGCTCCGGCCGAACAAAGGTGCGCTATTCTATCTGCTGGTAATGTTTCCGCTCTGGCTTCGTGCCTTCAGATGCTTGCCGTTTTTACCGTTGAGGGTGAATTGTGCGCATGTGACAAAAGTTATTCAAACCGTTATGCTTTAAATGACGGTAGTTATTTCTTTCATTTGATCAAGCGTTCCGTTATGAGGGATTTAAGGCCTTCTCAAAAACATCACATTGAATCTTTGGACACATGTATGAAACATTAAATATAGATAAAAAGAAAAACTAATTGTACAGTTTGCATGTAAATCGTGACACGAATCTTTTGAGCCTAATTGTGCTAACGACGAATTAATTAGGCTAGTTATGAAATTAGTTTTTTCATTCGTATCTAAAAACCCCTTTCGACATCCAGTCAAACGTCCGATGTGACACCCAAAATTTTTTATTTCGCTAGCTAAACAAGGCCTAAGTTTACCACCATATTTTTTTTAAAAACTCAAGTTTACCGAAGTTAGAGAGTGCATTTGGCCTGTCTACCTACCCCACCCCCCCAAAAAAAAAAAAAAAAAAAAGGCCAGCTTGGCCTCGAGGGGGGGCCCGGTAC | |||||||||
gi|89175280|gb|CI111799.1|CI111799 CI111799 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): AAAGGTGCCAAAATAAGACATACCAGTCGTACTTAAAATCATTCCAGATTACAGACTAGGGGCTGTTTGGTTTCCAGAGACTTATTCTAAGTCCCTGTCACATCGGATGTTTGGACACTAATTTGGAGTATTAAACATACACTAATTACATAACCCATTTCATAAGCTTGGACTAATTCGCGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTTGACAATGTGATGCTACAGTAAACTTTTGATAATTATGGATTAATTAGGCTTAAAAAATTCGTCTCGCGGATTAGCTCTCATTTATGAAATTAGTTTTTTTATTAGTCCATGTTTAATACTCTAAATTAGCGTCCAAACATCCGATGTGACATGGGTTAAAAAGTTTTAGCCCCATCTAAACACCCCCGTCTATAGGTACCCCATACAACAACGTTCATTAAATCCAGGAATGCATCTTTCAAATAGTACAAAGCTCCAGCAATCTAACATTCATCAGGGCTAACAGGAACAGCACGTTTTCCAGCTT | |||||||||
gi|87004753|gb|CI306837.1|CI306837 CI306837 Oryza sativa (japonica cultivar-group) UVC irradiated shoot Oryza sativa Japonica Gr GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): GGTCCGCTTTAAAATAGTTATCTTTCTAAAATTTAAAATTTATCCTGAAAGACTTATCACTCTAGTTACTACTTATCACATTCATCTCTTTTCATTCAAATTTCTTTCTATTATTGTATTTTTCAAGTACTACTCAACTTTCAACCGTATATCATTTAGGCCCTGTTTAGATCCCACTCTAAAATTTTTCATCCTGCCACATCGAGTATTTGAACACCAGCATGAAGTATTAAATATAGGCTAAAAATAACTAATTACACAGATTGTGACTAATTTGCAAGACGAATCTTTTAAACCTAATTGCTTCATGATTTAACAATGTGGTGCTACAGTAAACATTTGCTAATGACTGATTAATTAGGCTTAATAAATTTGTCTCGCG | |||||||||
gi|88200221|gb|CI200071.1|CI200071 CI200071 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): GCCAGTTTGCATGTAAATTGTGAGACGAATCTTTTGAGCCTAATTACGCTATGATTTGACAATATGGTGATACAGTAAATATTTGCTAATGATGGATTAATTAGGCTTAATAAATTCGTCTCACAGTTGATAGACGGAATTTATAATTTGTTTCGTTATTAGTCTATGTTTAATACTTAAAATGTGTGTCCGTATACGTCAAAAAAAAATTGGGTATCTAACTAAACACGGCCTTGGTATGTTATGCTGGCGACGTGTTGTCAGCTAGTACAATCAAAATCAAGTGTAGGTGTTGGCGACGTCGGCGAGGTGCCCGGCGAGCTCCACCGGAGCGGAGAACATGGCCATGTGGTCGGCGCCGGCGATCTCCCTCACCTCCTCTACGGGGCAGCCGGCGATCATCCGCCGCTGGTAGGCCTCCACGATGGCCTGGTCCTTCCCGCAGACCACGTACACCTTGCGCACCGCGCCGTACCGGTCCTCGCCGAACGGCGGCTGGCGGCGCATGTCGTCCAC | |||||||||
gi|88839178|gb|CI378102.1|CI378102 CI378102 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): CACATCAAATATTTGGACACATGCACAGAGCATTAAATGTGGACGAAAAAAAAAACAATTGCACAGTTTACATGTAAATTGCGAGACGAATCTTTTGAGCCTAATTATGCCATGATTTGACAATGTGGTGCTACAGTAAACATTTACTAATGACGGATTAATTAGACTTAATAGATTCGTCTCGCATTTTATAGGCGGATGATTATGTAATTTGTTTTATTATTAGACTACGTTTAATATTTCAAATGTGTGTCCGTATAAAAAAAATTGGGCGTGAAACTAAACACGGCCAATTTTCATAAATCAACAAGCTCAAGTTGCATCATCTGACACGCTTCTTTGTCCTGGCCAATTTAAGAGCTAATTTCCAGTTCATTAAGTGCTTCGCCTGTGAGTGTAATATTCCTCAGATACCTGCAAATCTCACTGGTGCATAAGGTGACCATGCAAACGGAGTTCTGCGGGTGGACATCAAGCTTGGTTAATCCTTGCAGCGTCCTCTTTCTCAAATTAATA | |||||||||
gi|88438086|gb|CI536245.1|CI536245 CI536245 Oryza sativa (japonica cultivar-group) 4 nuclei stage anther Oryza sativa Japonica G GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): GCCAAAAACGTCACATCGAATGTTTGGACACATGCATAGAACATTAAATGTGGACGGAAAAAAAACCAATTGCACAGTTTGCATGTAAATTGCGAGACGAATCTTTTGAGCCTAATTACGCCATGATTTGACAATGTGATGCTACAGTAAACATTTGCTAATGACGGATTAATTAGGCTTAATAGATTCGTCTCGCAGTTTACAGGCGGAATATGTAATTTGTTTTGTTATTAGTCTACGTTTAATACTTCAAATGTGTGCCCGTATACGTCAAAAAAAATTTGGACAGTGAACTAAACACAGCCAAAGTTTTTTGCCGGGTAAACACAGCCAAAGTTTTAAAGTGGAAACGTAGATTGTCTATTAGTCTATGACCAGCTACTATAATTAAAG | |||||||||
gi|89195330|gb|CI051443.1|CI051443 CI051443 Oryza sativa (japonica cultivar-group) cold treated callus Oryza sativa Japonica Gro GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): CTCATAAAATCACATCATTTTACTTTACATTTGAACATCATTCTACAAATCATTTTAATTTAAATCATATCAACTTATGAAAACTTATGTTTATGTAATATTTATGTAAGCTTATGTTGGTTAAGCTATCTTACACATTATTTCGACTTATTGTTATCATAGTAAATTCCTGCAATAACGTGTGGGTTTCACCTAGTTATTAATGTAGGAGTGCTGACAATCATTTTGCTTTCTTTCATAAAACAGTTACAGCCTTGTTTATTTCGTGAAAAAAAAATTTGGGTGTCACATCGGATGTTTGATTGGATGTTGGAAGGTGTTTTCGGACACGAAAGAAAAAACTAATTTCATAACTCGCCCAGAAACCGCAAGACGGATCTTTTGGGCCTAATTAAGCCGTCATTAGCACATGTGGGGTACTGTAGCACTTATGGCTAATCATGAACTAATTAGGCTCAAAAGATTCGTCTCGCGATTTCCGTGCAAACTGTGCAATTAGTTTTGTTTTTATCTATATTTAATGTCTCATGCATGTGTCCAAAGATTCGATGTGACATTT | |||||||||
gi|88724537|gb|CI747796.1|CI747796 CI747796 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): GTGGCTTTATATTGTTTGTTCAGATCCCTCTACTATTTCTTTCTGCATCCGCCANTGGGTCCGTGGGCAGTCGTGCCATGCTAGACTACAAGTTGAGGCACAGGCCCAAGTTTGGCATGGGCCAGCCAACATGCGGTGCCGTGCCTAGGTCAGGCTGCCAGCATGCCTCGGGCCGATCCAATCCATTTGGTCACTGGGCCTGTTTAGTTCCAAAAAGTTTTTCCCTAAAACATCACATCGAATATTTGAAGATATGTATGGAGCATTAAATGTAGATGGAAAAAACTAATTGTACAGTTATGATGGAAATCGCGAGATGAATCTTTTGAGCTTAATTAGTCCATTATTAGC | |||||||||
gi|58031282|gb|CX728825.1|CX728825 OSJNEf13P11.r OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf13P11 3', mRNA sequence GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): CAATAGACGGGCAAATCGTTGGTGCCTGGATCAACCTCGTATAGCAACTTCACAATGGACATATTCGGGCGAACGCTTTGCCATGTCCACGGCAGGCGATGACTAGCTAGGGCAGCTAGTTACGATCTACAAAGTAATTGATTTCTTGTGTGAGGCCTTGTTTAGATCTCAAACGTCACATCAAATGTTTGGACACATGTATGGAGCATTAAATGTGGGGGAAAAAAACAATTACACAGTTTGCATGTAAATTGCGAGACGAATCTTTTGAGCATAATTACGCCATGATTTGACAATATTATGCTACAGTAAATATTTGCCAACGACAGACTAATTATGCTTAATAAATAAGGCTCACAGTTTACATGCGGAATCTGTA | |||||||||
gi|88831936|gb|CI369618.1|CI369618 CI369618 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): AGAGACCGGCCGTGCACTTTACTCTATAATTCAAGGAACAAGCCATACATAACAAAAAAAAGTGGGTTCAAAAAGTTAAAACAAAATGATATATATCTCATCACCAAACCAATCTTTTGAACCATATGGTGGAAGTTAGGACTAGAATTCCATCGATGCTATAGAACAATCATGAGGATAGTATGATTCATATCTGGACTAACCATAGGCTTCAGGGCATCTAAACGAATTTCAATATTGTCTCCTAGGTGGTTTCGATTCTGCTACTGTAACTCGGATTTGTGTGCCATCCATGTCAGCGCCATCAAGATTTGAAACTGCATTCTCAACCTCTTCAGCGGAACCATACGTGACAAAACCAAATCCCCTTGACCTGCCAATCTCCTGTCATAGATGACCTTGGCTTACAAGACCTCCCCTTCCCCACTGCTAGGTTTGCGAGAGCTGGCTTG | |||||||||
gi|29623262|gb|CB628273.1|CB628273 OSIIEb03L19.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb03L19 3', mRNA sequence GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): GCATGGTCGGCGATGTCGTAGCCGCCGGATCCGGCTATCTCTATCGAGTCCAGTCGCTTTTTGGCGAGGCGCTGCCGCGACCGCCGCCGGATCGGGGTCGTCCATCGCCGTCGCGAGCGCCGTGTGGCTCTCACGTCGTTGGGGGCTGCCGAAGCCGAGCGGGGAAGCACGTGCGCGATCTCCGGTTAGTTGAAGAGGACGGGGGTGGCGCGGCCCTTGATGGCACGGCGGTGGCAAACGTGCAGAGCCAGATGCGCGAGTTCTTGCGCAGCTCTCAGATCTCCGACACCCACTTGCCCCAACTCCACATGCTGCTGCTAGATCCAACGGGCGGCGAGCTTCGTCGGTGGAGAGCTTTTGCGCCGACTGCTCGAGCATCCAGCAAAATGTAAGGTGGAGGTGGTGCGGTGGTTGGGTCACGGATCGGCCAGGGTGGCGAGCCTGGGGGAATTGGCAGGCAGGCAAAGGAGGGAAAGACGGGCCAAACATTAAAAAAAAATAAAGGTTGCCAGTGGAAGAAAACAAACTGTAGAAGGCAAATCCGGTGACTTGGAGCTGCTAAGGGGCTGTTTGGTTTCCAGGGACTTATTCCAAGTCCATGTCACATCGGATATTTGGACACTAATTTGGAGTATTAAACATACATTAATTACAAAACCTATTCCATAAGCTTGGACTAATTCGCGAGACGAATCTTTTGAGTCTAATTATGTCATGATTTTGACAATGTGATGCTACAGTAAACTTTTGATAAAAAAG | |||||||||
gi|33689349|gb|CF317588.1|CF317588 HD--07-F11.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA library (HD) Oryza sativa J GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): ATCAACAGCACTGCTACTGGACATACTCTACTACTACTAGCCAGTAAGCTAGCTAACTAACTACGTGGCTATGGCCCCCACCGTGATGGCCTCCTCGGCCACCTCCGTGGCTCCATTCCAAGGGCTCAAGTCCACCGCCGGGCTCCCCGTCAGCCGCCGCTCCACCAACTCGGGCTTCGGCAACGTCAGCAATGGCGGAAGGATCAAGTGCATGCAGGGTGTGGCCAATTGAGGGCATCAAGAAGTTCGAGACCCTATCGTACCTGCCACCACTCACCGTGGGAGGAATCTTTTGAAGCAGATCGAGTACCTGCTTCGATCCAAGTGGGTGCCTTGCCTCGA | |||||||||
gi|88967709|gb|CI016224.1|CI016224 CI016224 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): AAAACAAAAGATATATATCTCATCACCAAACCAATCTTTTGAACCATATGGTGGAAGTTACGACTAGAATTCCATCGATGCTATAGAACAATCATGACGATAGTATGATTCATATCTGGACTAACCATAGGCTTCAGGGCATCTAAACGAATTTCAATATTGTCTCCTAGGTGGTTTCGATTCTGCTACTGTAACTCGGATCTGTCTGCCATCCATGTCAGCGCCATCAAGATTTGAAACTGCATTCTCAACCTCTTCAGCGGAACCATACGTGACAAAACCAAATCCCCTTGACCTGCCACTCTCCCTGTCATAGATGACCTTGGCTTCCAAGACCTCCCCTTCCCCACTGAATAGGTTTGCGAGAGCTGCATTGTCAACACCCCAAGAAAGGTTACCTACATAGACCCTGTTGGCCTCACCCCTGGGTGCTCTCTGCGATGATTGCTCCCTTGGTGGTGGTGGCCCTGAGTTAACCCTCAAAGATCTCCCATCAAGTATATAGCCATTGAATTGCTCGACAGCTGNCTCAACTTCTTCAACACTAGA | |||||||||
gi|88504702|gb|CI432208.1|CI432208 CI432208 Oryza sativa (japonica cultivar-group) callus suspension-cultured cells treated with GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): CATCTCTGAACACGTGTATAGAGCATTAAATATAGATAAAGAACTAATTGTACAGTTTGCATGAAAATCGCAAGACGAATCTTTTGAGTCTAATTAGTCCATGATTAACCATAAGTGCTATAGTAACCCACATATGCTAATGANGGATTAATTAAGCTTAATAAATCCGTNTCACGGTTTCCAGTCAAGTTTATAAAATTAGTTTTTTCATTCGTGTCAAAAACCCCTTTGGACATCNGGTCGGACAGCCCAAACGTCCGATATGACACCAAAAATTCCATTTCGCGACCTAAANAANCCTTACTAGAGTCACTCCACATCTCAAAGCATGTGACTGGATAAACCGCGAGCACAGTATTTGACATATAATCAACGGCGTACATTAATGAGTAGTAAAA | |||||||||
gi|29624863|gb|CB629874.1|CB629874 OSIIEb06H05.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb06H05 3', mRNA sequence GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): TGGGTTTTGCTATATAGTGCAGCACTTGGAAGCATGGAACATCGCTAAGAACACTTTTCCGTAGGAGTGAAAATCTCCAGGGTCCATGCCTATTGATTGTTGGAGACATGCGGGGGGCTGTGTTTGGTGGCTTGTTAAATGGTCCTCTCAGGCCTACAGAGAAAAGAAAATACCAGGGAACTAATCAGACATTTGTATTCACAACGATTTATGGTGAACCTAGGCTTTTCAGACCAACCGGTGCCAACAGGTACTACTACTTATGCTTGAATGATGCTTTGGCATTTGGAGGAGGTGGGAGTTTCGCGTTGTGCCTCGATGAAGATTTGTTACATGGAACCAGTGGATCATGTCAGACATTTGGGAACTCATGCTTGGCTCATAGTCCAGATTTTGAACTGAAGAATGTTGAGCTGTGGGGTTTTACTCATTCATGGGGTCGTTCAACATAGTTGGCCTTGGATACATCATAAATGAAGCAATCCCAAATCCCAATTGCCCTCTAGTCTAGTCACTGTATACCTATTATTTTTTATTGTAACACCATTGTTCTTATTGATTTAGGCAGTATTTAAGTTCCCTTCAAACTTCTAAAAATTCCGTCACATTAAATGTTTGGACATATGTATAGAGCATTAAATATGAACGAAAAAAATCAATTGCACAGTTTGCATGTAAATTGTGAGACAAATCTTTTGAGCCTAAGGACGTCATGATTTTACAATATGATGCTACAGTA | |||||||||
gi|88200789|gb|CI200639.1|CI200639 CI200639 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): TTTATTTTTTTTTTTTTTTTTTTTTTTGGGACGGAAAAAACAATTGCACAGTTGGCATGTAAATTGTGAGACGAATCTTTTGAGCCTAATTACGCTATGATTTGACAATATGGTGATACAGTAAATATTTGCTAATGATGGATTAATTAGGCTTAATAAATTCGCCTCACAGTTGATAGACGGAATTTATAATTTGTTTGGTTATTAGTCTATGTTTAATACTTAAAATGTGTGTCCGTATACGTCAAAAAAAAAATTGGGTATCTAACTAAACACGGCCTTGGTATGTTATGCTGGCGACGTGTTGTCAGCTAGTACAATCAAAATCAAGTGTAGGTGTTGGCGACGTCGGAGAGGTGCCCGGCGAGCTCCACCGGCGCGGAGAACATGGCCATGTGGTCGGCGCCGGCGATCTCCCTCACCTCCTCTACGGGGCAGCCGGCGATCATCCGCCGCTGGTAGGCCTCC | |||||||||
gi|88967048|gb|CI392010.1|CI392010 CI392010 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): ATGGACATATGCATGGGGCATTAAATGTGGGAAAAAAAACCAATTGCACAGTTTGCATGTAAATTGCGAGACGAATCTTTTGAGCCTAATTACGTCATGATTTAACAATGTGATGCTACAGTAAACATTTGCTAATGATGGATTAATTAGGCTTAATAAATCTGTCTCACAGTTTAAAAGCGGAATCTATAATTTGTTTTGTTATTAGTCTACGTTTGCTATTCGTCTGGCTTGTTTTCATACGGCGTTCATTGTACCTTTGAATGTCGAGAGTGGGACAGTTGGGGTGGGAAACCGCTGCAGCCCTGGCGTCATCCTCCGAAGACTCCACCTCGGCAGCAACGGCACCATTACAGTTGAATACAAGAGCGATAGACTTGAGGGCTGAAAGATGGTGCAGCCCAACAACCGGACCACCATGGACATCGAGCTGCCACCTTGC | |||||||||
gi|88489773|gb|CI427045.1|CI427045 CI427045 Oryza sativa (japonica cultivar-group) leaf of seedling gamma-irradiated (4min), aft GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): GGACACATGCATATAGCATTAAATGTGGACGAAAAAAAATCAATTGTACAGTTTGCATGTAAATTGCGAGACGAATCTTTTGAGCCTAATTGCGCCGTGATTTGACAATGTGGTGCTACAGTAAACATTTGCTAATGACGAATTAATTAGGCTTAATAAACTCGTCTCGCAGTTTACAGGTAGAATCTATAATTTGTTTTGTTATTAGCATCTTTACAGGCGAAATATGTAAAATTTTGGCCGAACATCTTAAACACGGCATCAGTTATTCTTGAAGCACTAGGCTGCGTATATTTTTATGGACGATATAGAAGAAAATCTGTACCATAACTCTAAATTTTTTTATGCTGAGGATATACAACTGCAAAAAGCCTGCATTCTGCCAACAGAAGACAGGGTGCACGATGCTGATTTTTTAAGAATCAAAAGAATTAT | |||||||||
gi|89195977|gb|CI395395.1|CI395395 CI395395 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): AAAACAATTGCACAGCTTTGCATGTAAATTGTGAGACGAATCTTTTGAGCCTAATTACGCTATGATTTGACAATATGGTGATACAGTAAATATTTGCTAATGATGGATTAATTAGGCGTTAATAAATTCGTCTCACAGTCGATAGACGGAATTTATAATTTGTTTTGTTATTAGTCTATGTTTAATACTTAAAATGTGTGTCCGTATACGTCAAAAAAAAATTGGGTATCTAACTAAACACGGCCTTGGTATGTTATGCTGGGGACGTGTTGTCAGCTAGTATAATCAAAATCAAGTGTAGGTGTTGGCGACGTCGGCGAGGTGCCCGGCGAGCTCCACCGGCGCGGAGAACATGGCCATGTGGTCGGGGCCGGCGATTTCCCTCACCTCCTCTACGGGGAAGCCGGCGATCATCGGCCGGTGGTAGGC | |||||||||
gi|29625997|gb|CB631008.1|CB631008 OSIIEb08E16.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb08E16 3', mRNA sequence GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): TTTAGGTCCATCCAAATGTCCCATGTTTGCTGTTTACTCCAATCTGCCCGCACTCATTGTCATTTAGACTTGTCATCCTTCCTGATTTCTGCACGACTTGAATTGAAGAGGATTTATCAAAAGCTATTAATTTGGTGCAAACGCGAAGAAATCTGGTTGAGAATGATCGTGTTTTGTTAAACCCTGCACATCGTGCTCAACAGGAATATGAAAGGGTGGCCAGCTGCTGTCTTAGTGGTGAACAAGAAAAGATGGTATCAGAACGGTGTTTGTCAGAACTGAGAAATGCAGTTCAAGAGGCTCAGATGTTTTGAGGATTGCCACCCTGTTAGGGGTTTGAGTTGACTGAACGTCGCCGGTTTTTACTGTTTTCCACTCGGTTCTCAGCAAACAGGTGGGGAGCAGTTTTCACTTCCAAAATGGTTGATGAATGGCATGAACAACCAGCAGCAATAGGCGTTGACTGGGTGACAATAGACGGGCAAATCGTTGGTGCCTGGATCACCCTCGTATAGCAACTTCACAATGGACATATTCGGGCGAACGCTTTGCCATGTCCACGGCAGGCGATGACTAGCTAGGGCAGCTAGTTACGATCTACAAAGTAATTGATTTCTTGTGTGAGGCCTTGTTTAGATCTCAAACGTCACATCAAATGTTTGGACACATGTATGGAGCATTAAATGTGGGGGAAAAAAACAATTACCCAGTTTGCATGTAAATTGCGAGACGAATCTTTTGAGCATAATTACGCCATAATTTGACAATATTATGCTCCAGTAAATATTTGCC | |||||||||
gi|88414243|gb|CI533613.1|CI533613 CI533613 Oryza sativa (japonica cultivar-group) 1 day after pollination pistil Oryza sativa J GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): GTATAAAATATTAAATATAGATAAATTAAAAAACTAATTACAAAGTTAGGGGGGAAATCACGAGACAAATCTTTTGAGCCTAATTAGTTAATAATTAGCCATAAGTGCTACAGTAACCCACATGTGCTAATGACAAATTAATTAGGCTTAAAAGATTCGTCTCGTGGTTTTCAGGCGAGTTATGAAATTAGTTTTTTCCTTCGTGTCCGAAAACCCCTTCCGATATTCGGTCAAACGTCCGATGTGACAATCAAAAATTTTCTTTTCGCGAACTAAACAGGCCCTAAACAACCTACAAATGCCAACAAGGCCTCCAGCTTCTGCATAAAGCAACGACAATCGGGAATCAAATCCTTATGAACCTATCGCCAGAGGTTGATACATCGATCATGTATATCGACATGTGCCT | |||||||||
gi|86904593|gb|CI321501.1|CI321501 CI321501 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): GGCCAAAAACGTCACATCAAAATATTTGGACATATGCATGGGGCATTAAATGTGGGAAAAAAAACCAATTGCACAGTTTGCATGTAAATTGGGAGACGAATCTTTTGAGCCTAATTACGTCATGATTTAACAATGTGATGCTACAGTAAACATTTGCTAATGATGGATTAATTAGGCTTAATAAATCTGTCTCACAGTTTACAAGCGGAATCTATAATTTGTTTTGTTATTAGTCTACGTTTGCTATTCGTCTGGCTTGTTTTCATACGGCGTTCATTGTACCTTTGAATGTCGAGAGTGGGACAGTTGGGGTGGGAAACCGGTGCAGCCTGGCGTCATCCTCCGAAGATCCACCT | |||||||||
gi|88527208|gb|CI455339.1|CI455339 CI455339 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): CACTGCTGCATTGTGCAGAATTGCAGATGATTTGACAATTGCACAGTTTACATAGAAATTTTGAGACGAATCTTTTGAGCCAAATTACGCCATGATTTAACAATATGATGCTACAATAAATATTTGCTAATGATGAACTAATTAGTCTTAATAAATTTGTCTCACAGTTTACAGGCAGAATCTGTAATTTGTTTTGTTATTAGTATACATTTAATACTTCAAATATGTGTCTGTATAATTCAAAAGCTTTACTCCCGAAGAACTAACACACCCTCAGTAAGCTCACACGAACGGCTCCTTGACCATGCACAGTAGCAACAGTACACCTCATCAATGGAGAAAGTTCGCAATGCAAACAACTCGAAAAACCCATTTGAGATCATCATGAACTG | |||||||||
gi|89186165|gb|CI048034.1|CI048034 CI048034 Oryza sativa (japonica cultivar-group) cold treated callus Oryza sativa Japonica Gro GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): TTTTTTTTGCCCAAAGAAAGTTCACCACATTATTATTCAACAGTAGTATGTTACAAAGGCATGGTTTATATTCAAACTTTTTTCTTCAAACTTTCAACTTTTCCGTCACATCAAATGTTTGAATACATATATGGAGCATTAAATATGGACGAAAAAAACCAATTGCACAGTTTGCATGTAAATTGCGAGACGAATCTTTTGAGTCTAATTACGTCTTGATTTGACAATGTGGTGCTCAAGTAAACATTTGCTAATGACGAATTAATTAGGCTTAATAGATTCGTCTCGCAGTTTATAAGCGAAATCTGTAATCTGTTTTGTTATTAGTCTACATTTAATACTTCAAATGTGTCCGTATACTTCAAAAATTTTTTTTGGCACACGAACTAAACACAGCCAAAGACAACAAAATTATTCAGCAATGTTATCTCTACAAGAAATGATGCAGCATTTGGCAGTGCTAAATTCGGCTTGAATCCCTCCCAAATATGAACCTCCGAGTCCAGTCGGATACCACCAGCATCCGTGTGCGCCAACTCACTTGTTTGCTTGCATATACAGAGTACCAGAGCCACTGAG | |||||||||
gi|86546131|gb|CI186337.1|CI186337 CI186337 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): GCACAGGTTTGCATGTAAATTGTGAGACGAATCTTTTGAGCCTAATTACGCTATGATTTGACAATATGGTGATACAGTAAATATTTGCTAATGATGGATTAATTAGGCTTAATAAATTCGTCTCACAGTTGATAGACGGAATTTATAATTTGTTTTGTTATTAGTCTATGTTTAATACTTAAAATGTGTGTCCGTATACGTCAAAAAAAAATTGGGTATCTAACTAAACACGGCCTTGGTATGTTATGCTGGCGACGTGTTGTCAGCTAGTACAATCAAAATCAAGTGTAGGTGTTGGCGACGTCGGCGAGGTGCCCGGCGAGCTCCACCGGCGCGGAGAACATGGCCATGTGGTCGGCGCCGGCGATCTCCCTCACCTCCTCTACGGGGCAGCCGGCGATCATCCGCCGCTGGTAGGCCTCCACGATGGCCTGGTCCTTCCCGCAGACCACGTACACCTTGCGCACCGCGCCGTACCGGTCCTCGCCGAACGGCGGCTGGCGGCGCATGT | |||||||||
gi|88692738|gb|CI736313.1|CI736313 CI736313 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): TGGCTTTATATTGTTTGTTCAGATCCCTCTACTATTTCTTTCTGCATCCGCCANTGGGTCCGTGGGCAGTCGTGCCATGCTAGACTACAAGTTGAGGCACAGGCCCAAGTTTGGCATGGGCCAGCCAACATGCGGTGCCGTGCCTAGGTCAGGCTGCCAGCATGCCTCGGGCCGATCCAATCCATTTGGTCACTGGGCCTGTTTAGTTCCAAAAAGTTTTTCCCTAAAACCATCACATCGAATATTTGAAGATATGTATGGAGCATTAAATGTAGATGGAAAAAACTAATTGTACAGTTATGATGGAAATCGCGAGATGAATCTTTTGAGCTTAATTAGTCCATTATTAGCCATAAGTGCTACAGTAATCCAC | |||||||||
gi|86844800|gb|CI338698.1|CI338698 CI338698 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): GGACCGGAATGACACACTTTGTCAAATTATGAGACCTGAATAGAACAAGTTTAGAGACCGGCCGTGCAATTTACTATATAATTCAAGGAACAAGCCATACATAACAAAAAAAAGTGGGTTCAAAAAGTTAAAACAAAATGATATATATCTCATCACCAAACCAATCTTTTGAACCATATGGTGGAAGTTACGACTAGAATTGCATCGATGCTATAGAACAATCATGACGATAGTATGATTCATATCTGGACTAACCATAGGCTTCAGGGCATCTAAACGAATTTCAATATTGTCTCCTAGGTGGTTTCGATTCTGCTACTGTACCTCGGATCTGTCTGCCATCCATGTCAGCGCCATCAAGATTTGAACGTGCATTCTCAACCTCTTCAGCGGACACATAGGTGACAAAACCAAATCCCTTGACCTGCCACTCTCCCTGTTATAGATGAGCTTGGCTTCACGACTCCC | |||||||||
gi|29680160|gb|CB676435.1|CB676435 OSJNEe12L04.f OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe12L04 5', mRNA sequence GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): CTGCATTGTTGTGGATCGAGTAGCTATAGCTAGCTAGTGATGGAGATCTTGGTGAGTGCACTGCTCCTGCTCCTCGTGCCACCCTTGTCCGCCCTCCTCGCCGTCGCCGCGCCGAGCCTCGCGTGGCCGTCGGGGTCGTCGTCGGTGAGGAAGCTGATCGCCAAGAAGGTGGCGCCGGAGCAGGCGGCGCGCGACGAGCTGCTGCGCGTGGCGCGGTACAGTAGCGCTAGCGTCGCCGCTGCCGCTAGTGCTGTCCAACAACCAGGCGGCAGCGAGAGTAGTCGTCCGGCGGCGGCGGCGGCGGATGATGGTGGGCGGCCGGATCAGTGCGCGGTGTGCCTGAGCGGCATCGAGGAGGGCGACGAGGTGAGGGAGCTCCGGTGCCGGCACCTGTTCCACCGTGGCTGCCTCGACCGGTGGTGGTTGTCGGCGCGGCCGCCCGCCACGTGCCCGCTCTGCCGCTGCCGGCTCCTGCAGAGCCCGTCGGCGGCGGCGGACGACGGCGACGGCGACGGCGAGGAGGATTCGGACTCGGACATGGTGATGTTCATGGCGTACCTGCGAAGCAGTAGCACCTGGCTCTAGCCATTAAGGGCGTGTTTAGTTCCAAAAACTTTTCTCAAAAACATCGCATCAAATCTTTAGACACATATATAGGACATTAAATATAGATAAATAAAAAACTAATGGCATAGTTTGCATATAAATCGCGAGACGAATCTTTTGAGTCTAATTAGGCCATGATTAACTATAAGTGCTACAATAACTTACATGTGCTAATGACAGATTGATTAGGCTTAAAAGATTCGTCTCGTGGTTTTAGTTTTTTTATTCGTGACCGAAAATCCCTTTTG | |||||||||
gi|88513664|gb|CI441170.1|CI441170 CI441170 Oryza sativa (japonica cultivar-group) 4th leaf leaf 3mM SA(salicylic acid) for 1 da GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): GCTAAGGGCCTGTTTGGGAAACATGGATTTATTCCCCAAGTCCCTATCACATCGGATGTTTGGACACTAATTTAGAGTATTAAACATACACTAATTACAAAACCCATTCCATAACCTTGGACTAATTCGCGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTGACAATGTGATGCTACAGTAAACTTTTCATAATTATAGATTAATTAGGCTTAAAAAATTCGTCTCGCAGATTAGCTCGCATTTATGAAATTAGTTTTTTTATTAGTCTATATTTAATACTTCAAATTAGCGTCCAAACATCCAATGTGACATGTACTTTAAAAAATAAACACCCCCTAAAATAGTGCCTCCCTTTACATTAGCTGACTTAGTAGAGTATGAACAGAGTTGTTTAAATGGACAC | |||||||||
gi|86869795|gb|CI316523.1|CI316523 CI316523 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): AAGACATACCAGTCGTACTTAAAATCATTCCAGATTACAGACTAGGGGCTGTTTGGTTTCCAGAGACTTATTCTAAGTCCCTGTCACATCGGATGTTTGGACACTAATTTGGAGTATTAAACATACACTAATTACATAACCCATTTCATAAGCTTGGACTAATTCGGGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTTGACAATGTGATGCTACAGTAAACTTTTGATAATTATGGATTAATTAGGCTTCAAAATTCGTCTCGCGGATTAGCTCTAATTTATGAAATTAGTTTTTTTATTAGTCCATGTTTAATACTCTAAATTAGCGTCCAAACATCCGATGTGACATGGGTTAAAAAGTTTTAGGCCCATCTAAACACCCCCGTCTATAGGTCCCCTACAACAACGTTCATTAAATCCAGGAATGCATCTTTCAAATAGTAGCAAGCTACAGGCATCTAACTTCATCAGGGCTAACAGGAACAGCACGT | |||||||||
gi|89198135|gb|CI015524.1|CI015524 CI015524 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): CTTTTTTATAGCCGGCCGTGCACTTTACTCTATAATTCAAGGAACAAGCCATACATAACAAAAAAAAGTGGGTTCAAAAAGTTAAAACAAAATGATATATATCTCATCACCAAACCAATCTTTTGAACCATATGGTGGAAGTTACGACTAGAATTCCATCGATGCTATAGAACAATCATGACGATAGTATGATTCATATCTGGACTAACCATAGGCTTCAGGGCATCTAAACGAATTTCAATATTGTCTCCTAGGTGGTTTCGATTCTGCTACTGTAACTCGGATCTGTCTGCCATCCATGTCAGCGCCATCAAGATTTGAAACTGCATTCTCAACCTCTTCAGCGGAACCATACGTGACAAAACCAAATCCCCTTGACCTGCCACTCTCCCTGTCATAGATGACCTTGGCTTCCAAGACCTCCCCTTCCCCACTGAATAGGTTTGCGAGAGCTGCATTGTCAACACCCCAAGAAAGGTTACCTACATAGACCCTGTNGGCCTCACCCCTGGGTGCTCTCTGCGATGATTGCTCC | |||||||||
gi|88272367|gb|CI386222.1|CI386222 CI386222 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): GTCAAAATAAGACATACCAGTCGTACTTACAATCATTCCAGATTACAGACTAGGGGCTGTTTGGTTTCCAGAGACTTATTCTAAGTCCCTGTCACATCGGATGTTTGGACCCTAATTTGGAGTATTAAACATACACTAATTACATAACCCATTTCATAAGCTTGGACTAATTCGCGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTTGACAACTGTGATGCTACAGTAAACTTTTGATAATTATGGATTAATTAGGCTTAAAAAATTCGTCTGGCGGATTAGCCTCTCATTTATGAAATTAGTTTTTTTATTAGCTCCATGTTTAATACTCTAAATTAGCGTCCAAACATCCGATGTGACATGGGTTAAAAAGTTTTAGCCCCATCTAAACACCCCCGTTTATAGGTACCCGATACCAGAAGGCTCATTA | |||||||||
gi|44670704|gb|CR284138.1|CR284138 CR284138 Oryza sativa library (Han B) Oryza sativa cDNA clone y630d03p5, mRNA sequence GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): TCGGAATTCGGCATTATGGCCGGGGTTGGCATGAAGGATCACCTGGTGTCAGGCATCTATCGTCATTTAGTTCTTTTGACAACCCAAGAGGGCGTCAAATCCAAAAGGCTCCCCTCCGTACCAAAAGTATGCTAGCTGCTTTCTTTGTCAAGCACAAGTCGGGAAAGATGAAAAACGTTTCTGTTCGTTGATCAATTTCAAGCCTCCAGTTTGTCCAGCCCTGTCACAACGAAGTACAACCACGGAATTCAGATTACATCTACAATATGTCTGTGTCTTGTATATTAGTGCTCTAGAGATGAATCTTTTGGATAAAGTTTTTATATCTTAATGTTAATGTCATCTTTCTGATGACTTAAATGTTTAATATATGGGTATAGAATAACAGTTTTCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAACCACAACAACAAAAAAAACAAATCAAAAACAAAAAACAAAAAATTTTGGGCGGTTCAGGACAAGTAAATTATAAACCCACAAAGCTTAACGCCCCGGCCGAACACTGAGCCAACTGGCCCATCGGCCCAAAGCGAGCGCACTACATCCACGGCCCGCGTCCCACACGCCGGCTGGCAACCCCGACGACCACATACCCCCCGAGCAACCCCACGACCCGGAGAAACAAACACAGACACACCAAAACGCAAGAAGAGATCCAAAATGAACACCACACGCAACATCCTCACAGCACCACCGCACCAACACAACTACGACAAACCCAACCACAACCACAGCCACACCGCCGATAACAGAAACAGAGCAACACACCCACAACACAGAACACGGACCAACACACACACAGGATCAGA | |||||||||
gi|66925415|gb|CX112263.1|CX112263 EI074P06 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): TTGACGTGTCTGCCTGTATGTTCATTCTCTCTGGCTTGTTGATAGGCGATATGCTATTGGTTTGTGCTGTCCTAATCCGTGTGCTGCGCTGGTATGAGGTATGTTGAGTCGTGGAGTTTATTGGTCAGTGTGTGAAGTGTGATCTTCTTGATAAGCAAGTACTGCTATGTCATTGGTCGGAGTCGTATTATGGTAATGCAGCGTATGAAGTCGGCGCAGCATGATAATACGAGGTCGCGCTATCTCGTGGAAGCGTAAGGCTAGCGCAGCTCATGTGCGGCAAGCACGAGGCTAGTTAGGTGCTAGAAGCAACGGTAACGCGTGCCCGACCTTGATGTGTTGTACGAGATCAGTCGGTTCTGACGAAGAGAAAGGAGTCTGTGGAGAGTGGCTGAGTGCTATCGGTCGATGGCGCCGATAGTCGGTTAGCACCGCTGTCGGTCGTGCGCGTGACGGTGACGCGGGTCTGTCGTGGTGGTTCAGGTTGAGATTTGGAGGATGTCTCGTGGTAGCTAGTGACAGTTTCGCTGTCTACGTCGGCGTCCTCGAGGATACTGACGAATGTCTGGTAGCGCGGTATGTGAGGTTAGTGATGTGTGGTATTGTCTTGTAGTGGAGTGTCGGTAGGCTGATGATTGTGATTCGACGGTACATGTGTTCTGTGTGAGCTTGATGCTGAGCGTTGCTAGCGAGTATCGTATGGTTGTGCTGCGTTGCGTTTGTGCGGCTTCTTAGTGTATCGTCGTGTCACTGTTAGAACGGCGTATTCGATTAGTGCCTCTGTTAATCGTGATAGTGTAGATGTATGCAGCCTGGTAGCTATCGAGTTGTGACAGACGTGTGTCTAGGATGCGGATAGCGTACATGGTGTCGACGTAGGAGATTTCGATAGATTCGTTATGGTGTGGTTTATTGGCATGTCTGGTTACTTCCGATTTAGCTGCGAGATGGATCTTGTGAATGTGCTGGTGTGCGTTTAGTATTTAGCGGGTTGAGTAGTGATGTAGGAGGGCGAGAGAATCGTGTCACAATACGACAGATGTGTAGCGTCATGCTGATCTATGGCTCAGTCGCTTGCCAGTGTCCCATAGTGATACATATCGTGCTCTATCTGTCGATAGGTGGGAGATCCGGAGAGTAATGTTCAGACTGGCGCACGATAGAATTGGATGGTAGGTGGACTATGTCTGCAGTGAGTCTGCAACGTAAATCGTGATAAGCTGGAAGGTCGATGTCTATCGAGCTGAGCTGGTCTTCTTCACGTCATGTCTGTCTAATCCGTTAC | |||||||||
gi|29624885|gb|CB629896.1|CB629896 OSIIEb06H22.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb06H22 5', mRNA sequence GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): ACAAAGGCATGGTTTATATTTAAACTTTTTTCTTCAAACTTTCAACTTTTCCGTCACATCAAATGTTTGAATACATATATGGAGCATTAAATATGGACGAAAAAAACCAATTACACAGTTTGCATGTAAATTGCGAAACGAATCTTTTGAGCCTAATTACGTCTTGATTTGACAATGGGGGGCTACAGTAAACATTTGCTAATGACGAATTAATTAGGCTTAATAAATTCGTCTCGCAGTTTACAGGCGAAATCTGTAATCTGTTTTGTTATTAGTCTACGTTTAATACTTCAAATGGGTCCGTATACTTCAAAAATTTTATTTTGGCACACGAACTAAACACAGCCAAACTCAACAAAATTATTCAGCAATGTTATCTCTACAAAAAATGATGCAACATTTGGCAGTGCTAAATTCGGCTTGAATCCCTCCCAAATATGAACCTCCGAGTCCAGTCGGATACCACCAACATCCGTGTGCGCCAACTCACTTGTTTGCTTGCATATACAGAGTACCAAAGCCACTGAGTGCTATGGCCCATGGAAACCCAGTCGCCTGGGAGCTCTGCAGCAGCTTGCTCTCCACCCAAGGGTGCAAATTGCCCAAGATGCTTGTACCGGAATGGGCGGAAATTGTGCCGTCCTGATCCTGTTCCTGTCATGCGCAACGGACCTTCTGGATGTTCTTTGCATTGGTCCATCTTGTTAAAACAT | |||||||||
gi|88996837|gb|CI389503.1|CI389503 CI389503 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): TTGACTAAATGTGAATAAATTTTAACCAAATTCTTACATAAAAATATGAACAACCAAAAATTCCGTACAAGATATTTGCTTGCCGGTGTGAGTTCGGAGGGATTTCCGAAATTACTGAAATTACTTTCAGATATTTCGAACTGAAATTTTAAACCTGGTAGCAAAAAACTAAGGGGGTGTTTGGGAATTAGGGACAAAAATTTAGTCCCTGTCACACCGGATGTTTGGACGCAAATTTAGAGTATTAAACATAGATTAATTATAAAATACATTTCATAACCTTGGACTAATTCGCGAGACAAATCTTTTGAGCCTAATTAATACATGATTAGCCTATGTGATGCTACAGTAAAGATTTGCTAATTATGGATTAATTAGGCTTAAAAAATTCGCCTCCTGGATTAGTTCTCATTTATGAAATTAGT | |||||||||
gi|29668255|gb|CB664530.1|CB664530 OSJNEd10E19.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd10E19 3', mRNA sequence GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): TAAAGAAGGCATTAGGCAGCAGCAGATGACCGGAACCGCCACAAGACATCACAAACATTACATTGTACCGACTTTGGCGAACAAAAGAATGCAGGCTTTCTCTGAGATGCAAACTGATGCTGATATTGACTCAAGGCCTAGACCTTATCCCTCAGCAAAAACCCTTTTCTGGCATTTGGCTTCAGAGAAAAACTCCAAAACCAATGGAGCACGCCAATCTGAATTTGTCCTAGAAGAAACAAAGGCTACAAAACCTGCATCGAGAGGTAAGGAACCATCAACATCTCCATTGCCCAAGCATTTGCAGACAAACTTGGCCAGCTTTGATTTTGCTATGCATAATGTTGGCATGAAGGATCAACCTGGTGTCAGGCATCTATCGTCATTTAGTTCTTTTGACAACCCAAGAGGGCGTCAAATCCAAAAGGCTCCCCTCCGTACCAAAAGTATGCTAGCTGCTTTCTTTGTCAAGCACAAGTCGGGAAAGATGAAAAACGTTTCTGTTCGTTGATCAATTTCAAGCCTCCAGTTTGTCCAGCCCTGTCACAACGAAGTACAACCACGGAATTCAGATTACATCTACAATATGTCTGTGTCTTGTATATTAGTGCTCTAGAGATGAATCTTTTGGATAAAGTTTTTATATTTTAATGTTAATGTCATCTTTTTGATGACTTAAATGTTTAATATATGGGTATAGAATAACAGTTTTCAGTATAAGTGGATGTAAAAAGGAGTATGTCAACCATCATTTTCATTCATGTAGATTGTATGATGTGTTTGTACAGAAGAAAAAAAAAGCCAAAAAAGAAAAGCAGGCTACTG | |||||||||
gi|117228355|gb|CT859722.1|CT859722 CT859722 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): ACTGGGATCACGCGGTGGCGGCGCTCTGAATAGTGGTCCCCCGGGCTGCAGGAATTCGGTAGGCTCCAACGGGAGTCGAGACTGTGACATAGGCTGTGTTGTATCACACGGCGGTGTAGATGAAAAAAAATCAATTGTACAGTTTGTATGTAAATTACGAGACGAATCTTTTGAGGTCCCAAGAAATGATTTGATAATGTGGTGCTACAGTAAACATTTGGTAATGACAGATTAATTAG | |||||||||
gi|88249124|gb|CI248973.1|CI248973 CI248973 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): TTGCATGTAATTGCGAGACGAATCTTTTGAGTCTAATTACGTCTTGATTTGACAATGTGGTGCTCAAGTAAACATTTGCTAATGACGAATTAATTAGGCTTAATAGATTCGTCTCGCAGTTTATAAGCGAAATCTGTAATCTGTTTTGTTATTAGTCTACATTTAATACTTCAAATGTGTCCGTATACTTCAAAAATTTTTTTTTGGCACACGAACTAAACACAGCCAAAGACAACAAAATTATTCAGCAATGTTATCTCTACAAGAAATGATGCAGCATTTGGCAGTGCTAAATTCGGCTTGAATCCCTCCCAAATATGAACCTCCGAGTCCAGTCGGATACCACCAGCATCCGTGTGCGCCAACTCACTTGTTTGCTTGCATATACAGAGTACCAGAGCCACTGAGTGCTATGGCCCATGGAAACCCAGTCGCCTGGGAGCTCTGCAGCAGCTTGCTCTCCACCCAAGGGTGCAAATTGCCCAAGATGCTTGTACCGGAATGGGCGGAAA | |||||||||
gi|88246675|gb|CI246524.1|CI246524 CI246524 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): AATTGACTACATGCATGCATGCCTTATATTATGAAACATCTAAAAAAATGGTTGTGCCTTATATTATGGAATGGAGGGAGTATTTGATATTAGGTCCTTCCCTAATATTCACGTTTTTTTATAATGAGCCGAGAGAGTTTGAACCTGGCAACAAAGGGCCTGTTTAGTTCGCGAAAAAAAAAAAATTTTGGATGTCACATCGGATGTTTGACCGGATATTGGAAAGAATTTTTGGACACGAATAAAAAAACTAATTTCATAACTCGTCTGGAAACCGCGAGACGAATCTTTTGAGCCTAATTAATCCGTCATTAGCACATGTGGGTTACTGTAGCACTTATGGCTAATCATGGACTAATTAGGCTTAAAAGATTCGTCTCGTGATTTCCTGCCTAATTGTGCAATTAGTTTTTTTATTTACCTATATTTAATACTTCATGCATATTTTCAAAGATTCGATGTGATGTTTTTGGAAAAAAAATTTGGGGAACTAAACGGGGCCCAAATTATGCAGGAGCATGTTTAATCATCCCA | |||||||||
gi|27921326|gb|CB097134.1|CB097134 AF53-Rpf_13_E05_T7_019.ab1 IRRI Drought Stress Panicle Library Oryza sativa Indica Group cDNA GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): GACGAGACAAGGGGGACTTTGGCGAACAAAAGAATGCAGGCTTTCTCTGAGATGCAAACTGATGCTGATATTGACTCAAGGCCTAGACCTTATCCCTCAGCAAAAACCCTTTTCTGGCATTTGGCTTCAGAGAAAAACTCCAAAACCAATGGAGCACGCCAATCTGAATTTGTCCTAGAAGAAACAAAGGCTACAAAACCTGCATCGAGAGGTAAGGAACCATCAACATCTCCATTGCCCAAGCATCTGCAGACAAACTTGGCCAGCTCTGATTTTGCTATGCATAATGTTGGCATGAAGGATCAACCTGGTGTCAGGCATCTATCGTCATTTAGTTCTTTTGACAACCCAAGAGGGCGTCAAATCCAAAAGGCTCCCCTCCGTACCAAAAGTATGCTAGCTGCTTTCTTTGTCAAGCACAAGTCGGGAAAGATGAAAAACGTTTCTGTTCGTTGATCAATTTCAAGCCTCCAGTTTGTCCAGCCCTGTCACAACGAAGTACAACCACGGAATTCAGATTACATCTACAATATGTCTGTGTCTTGTATATTAGTGCTCTAGAGATGAATCTTTTGGATAAAGGTTTTATATCTTAATGGTAATGNCATCTTTCTGATGACTTAAATGGTTAATATATGGGTATAGAATAACAGNTTTCAGTATAAGTGGATGTAAAAGGAGGATGTCAACCATCATTTTTCATTCATGTAGATTGGATGATGGGGTTGNNCAGAAGAAAAAAAAAAAGCCAAAAAAAAAA | |||||||||
gi|58666286|gb|CK054972.1|CK054972 61982rsicek_5958.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): CGGCACGAGGCGATCTTTTGGATGATGGTTATAGGTGGCGAAAATATGGACAGAAAGTGGTGAAAGGAAATCCTTACCCAAGGAGTTATTACAAATGCACCTACCTAGGCTGTGATGTAAAGAAGCAAGTTGAGAGATCTGTTGAGGAACCAAATGCTGTGATAACTACATACGAGGGGAAGCATATCCATGATGTGCCTGCTGCAAGGAACAAAAGCCATGTCGTAGCCAATGCCTCTCTATTGCAGAACACAAAGTCGAATACCTACTGCACAGAGCAATCCTACACAACGATCACTTGCTAGATTCTGCCATACATCCGTCTGATTGCTCATATGTAGCATTTCTGAAGCTGTGTATTTTATCGGCCGTACCCACTAACGAGGCGATTTTTGGCACCATTGTGCCATGTATTTTTCCTGCTGCAAGCATACGTTCTCCTATTTGGGAACATCCGAATTGTAATATTGATTTCTGCAAGTGCTATTTCAATGGGATATGCAGAAGTTGTGATTTCTGAACCTGATGGAGCTTCACTCTTGGTCAGACCTTTTAATGTGTGATGCTGTTGTACTAGTACATATCAAAAAAAAAAAAAAAAAAAAACTCGAGGGGGGGCCCGGTAC | |||||||||
gi|89166597|gb|CI103883.1|CI103883 CI103883 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): GAGCATTAAATATTAACGAAAAAATAACTAATTATACAGTTTGTGTGTAAATTACGAGACGAATCTTTTAAACCTAATTACACTATGATTTGATAATGTTGTGCTACAGTAAACATTTGGAAAGGGATGCCATACTGTGCCATATGAGCTTTGGGCCCAATAGTAAACAAATGGGCCTCCATTATTGAATACTCCTCTCGTAGTCTCATCTCATGTCAGTTGATGCTGCTCCATGAACAAACTGTAGGAGTATGTCAATTATCATTATCATTATTGGTATTATATGGTGGCATTCGTTCCGAATGAATAATTGTAGCCTCATTCCGGCAAAATTTTTGAGAAATAATAATACAGGTGAGGTGATTGATAATTGATTCAGGGAATGCAATGCAGTGCAGTGCAGCTCAGCAGCAGCTATATACGGGACCGGACCGGACTAAGACGAAATTATTCCTTCCATGGATTCCATATTTCCATGTATCTTCTATATCATTTGGAGATATATAATCATCACCACAATGTCCTCCTCCTACTATCAGATGTCCATGAT | |||||||||
gi|157650513|gb|EX450147.1|EX450147 SSH001021 Osmotic stress SSH library Oryza sativa Japonica Group cDNA, mRNA sequence GTTCAAAAGATTCGTCTCGTG EST sequence (targeted fragment marked with yellow): GTCTGTGTCTTGTATATTAGTGCTCTAGAGATGAATCTTTTGGATAAAGTTTTTATATCTTAATGTTAATGTCATCTTTCTGATGACTTAAATGTTTAATATATGGGTATAGAATAACAGTTTTCAGTATAAGTGGATGTAAAAGGAGTATGTCAACCATCATTTTCATTCATGTAGATTGTATGATGTGTTTGTACCTGCCCGGGCGGCCGCTC | |||||||||