| mature miRNA: GTTCGGTTTGGTTCGGTTCTG species: Picea glauca database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|225913293|gb|GO365129.1|GO365129 GQ03510.B7P2_K20 GQ035 - Needles - End of season Picea glauca cDNA clone GQ03510_K20 5', mRN GTTCGGTTTGGTTCGGTTCTG EST sequence (targeted fragment marked with yellow): TCACTGTATGAGTGCTTGAGAAATTGGAGTTGATGCAACTGACAGTGGAAACCCTAAAGGCAACTGAGATTGGGAAACAAGTTAATCTGTTGCGGAAGCACAATTCAAAGGAAATTCGGTCTACGGTGAAGAGACTTATCAGTGGCTGGAAAGAACTTGTAGATGAATGGGTGAAGACTGCTGGTAATGTCGCTGTAGCTGCAATTGCAGGTACCTCGCCAGATTCTGTTTCACTTGCAACTGCAGATGATGAAAATGGACACCCTTCGCCCCCACTTGATGAGGGTGCCTTTCTGGCAACCCAGACAACTTCGATAGAAATATCTCAGATCTTCGATGGCATGGATGACGATGGGAATCCTCGTGTTGCTGAAAAGACTGAAAATGATGAATATGATGACGACGACGACGACGATGATGAAAAACAATGTATAGTAGAAAGACCCCATAAAATAAAGCAATCAGCTCATCAGAGTAACCTGAGTAGGGATAGCAGTCCTTGTGGCAAGCAAGAAACAAACAGAGAGAGAGGGGGATTGAAAAGGAATGTTCAAATTCAGGCTAGCAGGGACTGCCGGGGCCATAGGATGAGCAGCTCAAGTCGTATAATTACCAGTTCTGGGCCTGGGAGACCTCCAATAAGTTCGGAATGTAGAGTATATCGAGACAATGTGCAGAAACATACAGATTTGAACAAGAATCAGACCAAGCCGAACTCCTTTTCTCTCCAAAATCATAAATCAAAATCTCCAGATGATGCATCTGTT | |||||||||
gi|255780535|gb|GR954583.1|GR954583 GQ03510.B7P4_K20 GQ035 - Needles - End of season Picea glauca cDNA clone GQ03510_K20 5', mRN GTTCGGTTTGGTTCGGTTCTG EST sequence (targeted fragment marked with yellow): GTATATCGAGACATGTGCAGAAACATACAGATTTGAACAAGAATCAGACCAAGCCGAACTCCTTTTCTCTCCAAAATCATAAATCAAAATCTCCAGATGATGCATCTGTTAAAGTGAAGCTTGAAGCAGCAAAGAGAAGGCTTCAGGAAGGATATCAACAAGTGGAAAATGCCAAGAAGCAGCGCACGGTTCAGGTAATGGAATTGCAAGACCTACCCAAACAAGGCCCTAAACCGTTTCATGGTAGACCAGTGTCACAACATCATCGTCAGTGGATGAATAACCGAAGACAGTGACACCATATTATAAGGCAAAGTTGTCAAGACTCAAGAGGCAGCCACAGGAGTGTAAAAAGCTCTGATGATGAGAAAGTAACCAGCTAGTGTGCTGGCCTGATTTCCATTGTATAGTTTGTGGTCAATCTGGATCTATCTAGAAATTAATTCTAGATTGATTAGAACTCTCACATTAGAAGCTCAGAGATTGAGAGGACAAAACTAAGTTTTGTTTGGGATTCTTTCCTCTCCCATTTTTGTTGATTTGAAGTATCTGTCCTATGTGGCTAGCCTGAGAGTATGGCACATCATAAAGTAAGGAAGCAGAAAAGTCATTTCATGTTTTGATGTGCTGTTTGTATCCAGACAGATGACATTGGCAGCTTTGGCAGGGATTTTGGATCTTCTTAGTTTCATTGCTTGACAAGCTGTAGATGTTGCCAAATCGACTTTCTAATAAATATTGGAGGTCGTATTTACACTGACTCTAATGTATGACATGCAAGGATACAGACTTGATACAATGAATTATCTCTCTACATTTCTATGTTG | |||||||||