miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TAACACGAACCGGGACTAAAG
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|117224858|gb|CT861325.1|CT861325 CT861325 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TAACACGAACCGGGACTAAAG
|||||| ||||||.| |||||
ATTGTGGTTGGCCTTAATTTC

EST sequence (targeted fragment marked with yellow):
GCACAGTCGTACAAAATGGCACTACTACACAACTGATATTTTATCGGGATACCCATTTCGGTTAGATTTAGAACGGGTACTAGAGATATTTTTAAGTACCGGTTCTAAAAGTCCAAGTATAAAAACATCTTTAATTCCGGTTGGTGTTACAACCGGTACTAAAGATGTCTACAGGGTTAGTTTAAAAAGAAAGCATCCATATCCATGTCTGATGGGTGGAGTTGGTGGATGGTTACACGCGTGAGGGCTGAGGTGAGACATCTTGAGTTCGAATCACATATCCTACACATTTTTTTTTATTTCGTATGCATCTTTAGTACCAGTTATTTCAACCGGTACTAAAGATCGAGATATTTAGTCTCGATTTGTTAGTACCGGTTCTACATCCGATACTAAAAATGGTTCCCAACTGGTGTTAGAAATGGGTTCTCCACTAGTGTGGCAATACATTTACATTCACACATTAAGAATTCACATCGTCACCCATATTCACATTGACACTGTCTTTTAAAGTATAATTTAAATGTTTACATTGTGAATATTCGACAATGATAGGGAACCCAATCCCTATCTACAAGTCTAAACCTAAAATTAATTTGATCGACATGAGCTAATGAATAGATAAGCGCACTATCTATTGCTTGAAATGGTAGATCCATTAATTTCCTTTTCATATATAGATTGTAAAAAGTTGTCGTTGGCTGATTGGAAATAGACTTGGGCATGAAACCTATACCCCTCTGCAACTCCACGTAATCGAAAATCATCCTGGAATAAACCCCCAGGATGAAATTTAGACCAAGGAACGAAATTGGGCATCTATAAATGTGTTTGGGGGAGACAAAAATAAACCGGGTTTCATAGAAGTTTAAAAGGATCAAAGGTTGGAAACAATATTGGCAATAATTGGAAGAATTAAATTAATTTAATGGGGGAACTTTCTCTAAACCCATAATTTAGGGTTGGGGGTTCGGGCGAGCCCCGGGTTCCCCAAACACTAAAACAGGTTACCGCCCGCAAAAAAAACGGGGAAGCGGGGGTCCCCATTTTAGCGCGCGGGGGGGATTTAAAATTTAAAAGTATATATAGACCCTAAAATTTTTTTTTTTATAAAAAAAAAAAAAAGGGAAAATTTATATATTTTTGTTATTTTTTTTTTTTTTTTAAAAAACAAACACTTTTTTTTTTTTTTA



gi|117216727|gb|CT845454.1|CT845454 CT845454 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TAACACGAACCGGGACTAAAG
| |||||||||| | |||||.
AGTGTGCTTGGCGCGGATTTT

EST sequence (targeted fragment marked with yellow):
ACGTGAGTATTTTAGTTGCAAACTTTATTGCTCCGCGTTCTTCCTTTCGACATGAGTGTTTGTTTGTTTGTTTCCAGTTGCCACTAACCAGCCAGAGCCCCGGGGGGGAGAAGAGCGAGAGAGGAGGAGAAATCTTGCAGCAATCCCTCGCTTAGATTCGCCATTACCGCCGCTTTTGTTCCCACCAAGATTACCACCCCCTCCTCCTCCTGTGCTCGAGCGCTCGCATCGCATTTCAGGCTGCTTCTTGATTCTGCGAGGAGGTTGAAATCTCTCGTGGTATGATCTGATTTCGGGTTGATTTTCGTCACGCGGTGGATTCCTTCCCCCCAACACTATTCCGGTGCCAACCCTTTTTTGTTTTTTTGTTTTTTTTTTTTGTGGCTGTTCTTGGCGTCGCCTCTACTGGCTTCTTGCCGTGCTGCAGATTGCAACAGCTGCCATCCGTTCGTTCCGGTGGAGTGCACCCCTTCATCACCAAGGAGGAGAAAAAGCTGTAATCTTCGGCCGTTTCTGCCTTTCTGCAGCAAACGGTTGAAGAAAAGCCGCGTCTTTTGGGCGGATTTCGCGGAGGCCGCTTGAGGTTTTTAGGCGCGGTTCGTGTGAGCTTCTCTTTGGAATTTGTGGGGGAAAGAGTGAGGGAGGGAGGGAGCTCAGTGGGAGAGATGGAGGGGAATTTGCCGCCGAGAGGAGCCCTTGTCCATGG



gi|58597243|gb|CK007771.1|CK007771 27941rsicef_4037.y1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica G

TAACACGAACCGGGACTAAAG
|||||| ||||||||||||||
ATTGTGGTTGGCCCTGATTTC

EST sequence (targeted fragment marked with yellow):
GCACGAGGCGGGAGGCGATGCGGCCACACTGAGAGCCATCGCAGCCGTGAAGATGGCTGGGAAGGTGTGGAGCAAAGTGCCGCTGCATTGGTCTGGGGCTACGAGACGGGATGAAGGAATGGATATTGCGACCAATGGAGGTGAAAGCATTCTACAGTCCACCGTGAGCGTGAGTTGAAATTATCTCGCCGCAGGTACGAGAGCGTCGGGTAGTATTCCACCGCCGGCAACGGCCGCTTCGCTAGGGGAACATAGCCGGAGGTTTTAGCACAACCGCCGGACAAGTGGCGACATTCGTGTTCTTCCTCGCCCATATGCTGCACTGATTAAAGAAGAACACCGACGAGCTGTTCTTCATTTCTTCATCCCGTCGATGTCCGGGATGCGGAACAGCTCGCCGCTGATAGTGTTGCAGATGAAGCGCTTGCACTGGTGGAGAAACCTTTTGTAGTCCCGGTTCGTAACCCCCTTTAGTCCCGGTTGGTGTTACCAACCGGAACTAAAGATCGATCTGACCTTTTTTTTTTCATGGCCCTGTTGCTGCATGGTTTATATATATATATATATATATATATATA



gi|29634440|gb|CB639449.1|CB639449 OSJNEa10K08.f OSJNEa Oryza sativa Japonica Group cDNA clone OSJNEa10K08 5', mRNA sequence

TAACACGAACCGGGACTAAAG
|||||| ||||.| | |||||
ATTGTGGTTGGTCATCATTTC

EST sequence (targeted fragment marked with yellow):
CACTGAATTATTTTGCTTTACTAGTTAAAAACATGTCTATCATCTTGCTAAAATGTTCCATGCAAGAATTACTTAGGGACCTTTCTGATACCAAGCCATGATGCCACGGTACTACAGATGGTACCACCTGATGCCACATGGCAGATGCTACCATCTTTACTACTGGTTGGTGTTACCGGGGCATCTTTAGTAACGGTTGGTGTTAATTACCAACCGGTTTTAAAAATGGATATATTTAGTCCCGGATTATACGAAAAAAGGTTTAAACCGGGACTAAAGATGGGTTCCCCAGCGGTGGATAAACGATCAGCCCAGTGAATTATTGGCTTTACTAGTTAAAGACGTGTCTGCCCTCTTGCTAAAATGTTCCACGCAAGAACTTAGGGGCTTTTCTGACCTT



gi|109711559|gb|CI013164.1|CI013164 CI013164 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group

TAACACGAACCGGGACTAAAG
.|||||| |||||.|||| |.
GTTGTGCATGGCCTTGATGTT

EST sequence (targeted fragment marked with yellow):
ATACAAATATACTCCCGCGACCCGGCCATCTCGTCTCCACCATTTACCAGGACAATGCCTTTAACACACACACACAAGACACAACACATTCGGTAATTCAGCGTGAACGTGAGTACGTGACCAATAAGAGCAGATCTCATGTAGTAGCAGTGTAGCACCAGTAGTACAGTTCACTTCCACCGTTGCTCCTACCGTCCGGTGGCATGATGGCATCGCGTGCCGCCGTCTCAGCAGCAGCGTGCCAGTCATCGTGTGGGCGCGAACGCGCGCGATGCGTCTGAGCGTCTCCGACGCAGAGCCGCCCTAGAGAAAAAGCGCGCCCATCCACGGCGGGATCCAGAGGCGTCGCGAAAAATACCACCAGCTCACCACTGGTACTTGGCCTTGACGAGGACGTCCTCGTAGAGCTCGGCGGCGTGGTCCCAGCTGAGGTCCTGCGCCATGCCGCGCGCCTGGAGCCCCCTCCAGCTCTCCTTGTAGTTCCGGTACGTGTTGAGGCAGTGCCCGAGCGCGTCGATCATCCGGTTCGCCTCGGCGCGGTCGAACGTCCACCCGAGCCCCGT



gi|88719196|gb|CI742706.1|CI742706 CI742706 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TAACACGAACCGGGACTAAAG
.|| |||||||||||||||||
GTTTTGCTTGGCCCTGATTTC

EST sequence (targeted fragment marked with yellow):
GTTGTAGTAATAAACCGGGACTAATAAGCCACTTTAGTCCCGGTTCGTTTTGGAACCGGAACTATTGTGGAAATCGGCCGATCCTCCAAAGACCTCTTCTCCAGTAGTGATGTTTACTTGCAGCTTCCATGTTAGGATTAACGGACGATTGATTATGCTGCTTGGTCTACATCAGCACCATGAGCTTCTTTCTACAGAGGTTGTTGGACTTCAATTCTGGATGCACCCCATTCTCAGAACATTTTCGATCGCTGTATGTTGAGCCGTTGATGCCTCCCAATTGGGCTGGAGAAAGGGGCTTCTCTCCCGGTTGCAACATGCATGTTCACTCAGTCTACAAAGGTATTGCAAGCTTTTCGTATTTTCAGTGTTGATCCTGCCTGTACACAGAAGAA



gi|88958326|gb|CI095845.1|CI095845 CI095845 Oryza sativa (japonica cultivar-group) Panicles more than 5cm stage Oryza sativa Jap

TAACACGAACCGGGACTAAAG
.|||||| |||||||||| |.
GTTGTGCATGGCCCTGATGTT

EST sequence (targeted fragment marked with yellow):
ATACAAATATAACTCCCGCGACCCGGCCATCTCGTCTCCACCATTTACCAGGACAATGCCTTTAACACACACACACAAGACACAACACATTCGGTAATTCAGCGTGAACGTGAGTACGTGACCAATAAGAGCAGATCTCATGTAGTAGCAGTGTAGCACCAGTAGTACAGTTCACTTCCACCGTTGCTCCTACCGTCCGGTGGCATGATGGCATCGCGTGCCGCCGTCTCAGCAGCAGCGTGCCAGTCATCGTGTGGGCGCGAACGCGCGCGATGCGTCTGAGCGTCTCCGACGCAGAGCCGCCCTAGAGAAAAAGCGCGCCCATCCACGGCGGGATCCAGAGGCGTCGCGAAAAATACCACCAGCTCACCACTGGTACTTGGCCTGGACGAGGACGTCCTCGTAGAGCTCGGCGGCGTGGTCCCAGCTGAGGTCTGCGCCATGCCGCGCGCCTGGAGCCCCCTCCAGCTCTCCTTGTAGTCCCGGTACGTGTTGAGGCAGTGCCCGAGCGCGTCGATCATCCGGTTCGCCTCGGCGCGGTCGAACGTCCACCCGAGCCCCGTGTCGGCGAACGGGTCGAACGGC



gi|88721289|gb|CI744588.1|CI744588 CI744588 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TAACACGAACCGGGACTAAAG
|||||| ||||||||||||||
ATTGTGGTTGGCCCTGATTTC

EST sequence (targeted fragment marked with yellow):
GTTAAAAATGAGAGGAGGAGATAAGGTTGAGGAGGAGAGAGGAGTTAAAGGAGAGGAGGAGGTACCTCGATCCGATCGTGCACACCTCTCCGATCTCCGCGTCGATCTTTACTCCCGGTTGGTTTTACCAACCGGGACTATAAATAGATCTTTAGTCCCGGTTGGTGTTACCAACCGGGAGTAAAGCGTATGGCGATCTTTTTTCCCGGTTGATGTTATCAATCAGGACTACAAATAGATCTTTAGTCCCGGTTGGTAACACCAACCGGTACTAAAGATTGAAAAGTATCCTGTAGCTTTTAAACCGGGACTAAAGATATTTTTAGTCCTGGTTTTTAATACAACCGGGACTATTGTAAAATCTGG



gi|58656711|gb|CK045391.1|CK045391 42857siceh_0522.z1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gro

TAACACGAACCGGGACTAAAG
|||||| ||||||||||||||
ATTGTGGTTGGCCCTGATTTC

EST sequence (targeted fragment marked with yellow):
TATAGTCCCGGTTTCCTAACGGGACTACAATCTAGGACTAAAGATAGCTATCTTTAGTCCCGGGCGAAATAACCGGGAGTAAAGATCTATCTTTAGTCCCAGTTGATAACATCAACCGGGACTAAAGAGAGGGATCTTTAGTCCCGGTTGGTGTTACCAACCAGGACTAAAGAGAGGATAGGGACAATCCCGGATGGTCCTTTTTTTTGTTACTTTTTTATTTTCTTCCGAATCGGATGGCATGCACATCCCAAATCAAACCACAAATCCCAAATAAAGTAACATCTCAAATCCACATCACAAATCCCAAATCCACATCACAAATCTTAAAATTACTTATACACACAAATCTAAAACATCACAAATCCTAAAAAATTTACGCACAAATCAAATACATCACAGATTATACATCTCAAATCCATACAATGAATCACAAAATTACATCTAAGTGAATCACAAAATATCAAAAAAAAAAGAGATGGTCGTCTGCGCCGCACGCCT



gi|88724251|gb|CI747510.1|CI747510 CI747510 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TAACACGAACCGGGACTAAAG
|||||| |||||||| |||||
ATTGTGGTTGGCCCTCATTTC

EST sequence (targeted fragment marked with yellow):
TAAATTATTTTATACCAAATGCTTACAAGAGACAGCAAAAACAGTTTAAATCTATATTTCTAATCACTGGTGGAGAAACCAATCTTTGGTCGGTCGGCCGAAATCCACAATAGTCCCGATTCCACTAAAAACCGGGACTAAAGATGATCTTTAGTCCTGGTTGGTGGCTACAGTGGGCATATTTGATCTTTAGTCCCGGTTGGCACCAACCGGGACTAAAGATGATCTTTAGTCTCGGTTCTAAACCTGTTAGTCCTTGTCAGGCCCCCAACTTTACTCCCGGTTGGTGTTATAAACCTGGACTAAAGATCTAGAAGATTTTTAATCCCAGTTGGTATTACCAACCGGGACTAAAATTCAANGCTTA



gi|29624641|gb|CB629652.1|CB629652 OSIIEb06B02.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb06B02 5', mRNA sequence

TAACACGAACCGGGACTAAAG
|||||| |||||||| ||||
ATTGTGGTTGGCCCTTTTTTC

EST sequence (targeted fragment marked with yellow):
TGGAGGAAGAGGCGTAGAGATAAGGCTGCCCGTTTCCTCCTCCTCCTCGATCTCGTAGATGGCAGATGCCTCGTACTCTCCGCCACGATCTTTTGTTCTGGTTGGTAATACCAACCGGGACTAAAGATAGTAGGCATCTTTTTTCCCGGTTGGTGTTACCAACCGGGACTAAAAATAGCCAACGGGGACTAAAGATTAAAAAGCAGCTCTAAACTTTTGAACTGGGGCTAAAGATAATCTTTAATCCCGGTTTTTATTGCAACCGGGACTATCGTGGATTTTGGCCGACTGAGCAAATATGGTTTCTCCACCAGTGTAAATTCGGAACGTAACTTTTAATTTAGAAGTGAAGATATTATTAGCTTTACAGCACGGCATCAGCGAAATGACAGCAATATTAGTTTTATCAAGGCGAAATCGTACAAGTTATTGGGGTATCTATTTGTAAACTGGATTATCTTTTATATATTATCTACCAGTCACTTTTTAACTTCTAAATAACAATATTTACGTGCCAAACTTTTTTTTCGGATGAGACACATATACTGTGTTATAACTTTTTATTTTTTTAAAAAAAATACACTTCAGTGTAGATCTTACGAACATTAACAACTTATAATATATTTAGATTAATCCAGTAGAAGTATGGTAATGAAAATTAAAAGTCATACTAAATGTGTAGTTTTTCGGATTGTACAGTTCAGTTGAGTCGGTTAAGAAAAAAATTGAAGCAATTAATTGATAGATATATAGAGTGATTGCCATGTGCTTTGCCATCTCAGTGCATGCTGATTCATACGCCAATATCTAACTGATCGTCGGCATGCTGGACCAAT



gi|66927267|gb|CX114115.1|CX114115 EI085N23 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

TAACACGAACCGGGACTAAAG
|||||| ||||| ||||||||
ATTGTGGTTGGCACTGATTTC

EST sequence (targeted fragment marked with yellow):
TAGTGATTAGTATTACTGGGTAAAGCATTACTCTTTTTTTTTTTTTGTTCATACACCACCCTCCAAAGTTTTATCTACATCCAACATGTGGAATGTGACATTTTGAAATTAATTTCACGTTCATTTTTATCCAAAAGGACACATATTTTGAATAATAACGCATGTGCTACTAGTCGTAGACGTGGAATGCACAATACATAATAATTAAATATTCAAAATTTATGAGCCAATATTACGTATTAACAAATAGATCTCTTCCAGGCACTACACATAGAAAATATTGAAAACACTGGTGGAGAAACCATCTTTGGTCGGTCGGCCGAAATCCACAATAGTCCCGGTTCCACTAAAAACCGGGACTAAAGATGATCTTTAGTCCCAGTTCTAAAGGTTAGAGCTACTTTTTGATCTTTAGTCTGGGTTGGTAACATCAATCGAGACTAAAGATCATTTTTAGTCTTGGTTTAAAAGACGGCAGGTGGTGTCAGACTCCTCCTTTATCTTTAGTCACGGTTGGTGTTACCAACCGGGAAAAAAGATCGACATGCACGGTGCGAGATCGAGAGGACCGAGGCGCACGGGAGGATCAGTTAATAAGTTCCGACCTTTATCTCCTCCTCTCCGAACTCACCCCATCTCTTCCTCTTCCTCCTCTCCACACTCACTCCCATCTCTTCCTCTTCCTCCTCTCATCTCTTCCTCTGATCCGTCTCCTTCCCTCTNCCTCCCAATTCTCAATCTCCTCTGGATCCAACCCTCCCGTCTCCACCCGAATTCTCAAGAAGCGGCGGCCGG



gi|66929560|gb|CX116408.1|CX116408 EI104D17 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

TAACACGAACCGGGACTAAAG
|||||| |||||.||||||||
ATTGTGGTTGGCTCTGATTTC

EST sequence (targeted fragment marked with yellow):
AAACAACTGTCTCAAAATCAGTTAATTAGTAGCTTAGATAGCAAAGATCATCGGAGGATCGGCGATGGCGGCGGCGCTCAGGACCACCGGCGGCCGGCGGCTGGCGGCGGTGCTCGTCATGATGCTGTTCGTCTTGGCGGCAGCGCTGCTGGAGGCGCCAGCGATGGCCTCCGCCGCGAGGGTGTTGCTTCAAAGTGGACAGCTTCCGACTCCGTATCCGACCTGCAATCCAGGCCAATATCCATGCCCATCGCGTACTACTGTGCCATGATTCACTGGTGGAGAAATCGTTTGTAGTCCCGGTTCGTAATCCCCCTTTAGTCCCGGTTGTCTAATCGGGACTACGAATCCGAGACTAAAAATAGCGATTTTTAGTCCCGTGTGAAATAACCGGGACTAAAGATCGATTTTTAGTCCCGGTTGGTAACACGAACCGGGACTAAAGATCGGTCAGCCACGTGGCTGGCTGATCCATCTTTAGTCTCGGTTGGTGTTACCAACGGGACTAAAGATCTATGTACCATTTTTTTTTATTTGCATTGCCATGTTTGCTGCATGGTTGATTATACACACCATATATATATATATATATATATATATATATATATATATATATATATATATATACATACATATATACATATATACCTATATATATATACCTATATATATGCGCATGTTATATGTCACACAACAATTTACCCGCTTTTCATGTTAAAGGCTCAACTTAATGACACATTTGTTGCCAAATATTAAACCAAGAGAAGAGCCCAATAAAAGAATTATAACGCACATAACAAACGAGACCACATGGAGGCGAAAAAGAACTAAGAGACTG



gi|29659440|gb|CB655715.1|CB655715 OSJNEc09G04.f OSJNEc Oryza sativa Japonica Group cDNA clone OSJNEc09G04 5', mRNA sequence

TAACACGAACCGGGACTAAAG
|||||| |||||.||||||||
ATTGTGGTTGGCTCTGATTTC

EST sequence (targeted fragment marked with yellow):
CAGAGGGGATTACGCACGTGAGAACTGCGGGGGAATCACCGGCGTCCGGCGTAAGCCTAACCTCCTGCCGTGAGGTGATTTTATTTCGTTCAAGTTTAAATACTTTTATATTTAAATTTTTTTTATATTATTACATTGAATATATGTACGCACTCTGATGGAGAAACTATCTTTGATCGGTCGGTCAAAATCCACAATAGTCAGGTTGCAATAAAAAACTGCTGGTTAAGTTTAGAGCTATTTATTTTAAGTAAATTTCACAAAACTACAGGTATTTTTCACAATTTATCACAAAAATACATATTTAAGATCTTGTTTTATTAAACTATAGATTTAGTGTCTACTTTATCACAAAACTACAGGTACTTTATATAATCTATCACAAAACTACATATTTAAGAATTTATTTCACAAAACTATAGATTTAGTGTATTCGTCTATCCCAGAACTACACATTTAGTGTCTTCTTTTATCACAAAACTATAGGTTTAGTGTCTCCATTATCACAAAACTACAGGTTTTAACAACGCTAAAACATATAGTTTTGTGATAAATGAAGATATTAAATATGTAGTTTTGTGATATATTGTGCAAAGTGCCTGTAGTTTTGTGATAAACGTAGACACTAAATCTATAGTTTTCTTAAACAAGCTTTTAAATATGTAGTTTTGTGATAGATCGTACAAACTATATGTAGTTTTATGAAATTTACTCTTTTTTTTATCTTTAGTCTCGGTTGGTGTTAAAAGATCTTTATTACAGCAATCGAGACTAA



gi|88730993|gb|CI754606.1|CI754606 CI754606 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TAACACGAACCGGGACTAAAG
||||| ||||||||||||||
CTTGTGGTTGGCCCTGATTTC

EST sequence (targeted fragment marked with yellow):
GTTAAAAATGAGAGGAGGAGATAAGGTTGAGGAGGAGAGAGGAGTTAAAGGAGAGGAGGAGGTACCTCGATCCGATCGTGCACACCTCTCCGATCTCCGCGTCGATCTTTACTCCCGGTTGGTTTTACAACCGGGACTATAAATAGATCTTTAGTCCCGGTTGGTGTTCCAACCGGGAGTAAAGCGTATGGCGATCTTTTTTCCCGGTTGATGTTATCAATCAGGACTACAAATAGATCTTTAGTCCCGGTTGGTAACACCAACCGGTACTAAAGATTGAAAAGTATCCTGTAGCTTTTAAACCGGGACTAAAGATATTTTTAGTCCTGGTTTTTAATACAACCGGGACTATTGTAAAATCTGGTCGACCGACCAA



gi|88555731|gb|CI486009.1|CI486009 CI486009 Oryza sativa (japonica cultivar-group) 15 days after pollination pistil Oryza sativa

TAACACGAACCGGGACTAAAG
|||||| |||||||| |||||
ATTGTGGTTGGCCCTCATTTC

EST sequence (targeted fragment marked with yellow):
CGGGAGAAAATACATAGATTAACACTAGCCATTAGCAAATCAACAACAAAATAATAATAAAAAAAATCTCGAGGAACTGTCGCTTCCCCTCTTTAGTCCCGGTTGGTAGATTCCCTCTCTTTACTCCCGGTTGGTGTTACCAACCGGGACTATTATTTGAACCGGGACTAAAGATAGCGATCTTTAGTCCCGGATTCGTAGTCCCGGTTGGAAAACCGGGACTAAAGGGGGGTTATCAACCGGGACTACAAACGGTTTCTCCACCAGTGTGAGATGCACACGATAGTATGCATCATACACTTGTTATTTGACTATACAAGTAATTGAAATTCGATCAACAACAACCATAAGGAAAGAGTTGAAAGTTGGCGGGTGCCATGTTGCACACATATGGCAGTTGCAT



gi|29634440|gb|CB639449.1|CB639449 OSJNEa10K08.f OSJNEa Oryza sativa Japonica Group cDNA clone OSJNEa10K08 5', mRNA sequence

TAACACGAACCGGGACTAAAG
|||||| ||||| |||||||
ATTGTGGTTGGCAATGATTTC

EST sequence (targeted fragment marked with yellow):
CACTGAATTATTTTGCTTTACTAGTTAAAAACATGTCTATCATCTTGCTAAAATGTTCCATGCAAGAATTACTTAGGGACCTTTCTGATACCAAGCCATGATGCCACGGTACTACAGATGGTACCACCTGATGCCACATGGCAGATGCTACCATCTTTACTACTGGTTGGTGTTACCGGGGCATCTTTAGTAACGGTTGGTGTTAATTACCAACCGGTTTTAAAAATGGATATATTTAGTCCCGGATTATACGAAAAAAGGTTTAAACCGGGACTAAAGATGGGTTCCCCAGCGGTGGATAAACGATCAGCCCAGTGAATTATTGGCTTTACTAGTTAAAGACGTGTCTGCCCTCTTGCTAAAATGTTCCACGCAAGAACTTAGGGGCTTTTCTGACCTT



gi|29668043|gb|CB664318.1|CB664318 OSJNEd09P11.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd09P11 3', mRNA sequence

TAACACGAACCGGGACTAAAG
|||||| |||||.||||||||
ATTGTGGTTGGCTCTGATTTC

EST sequence (targeted fragment marked with yellow):
ATAGTTTTCTTAAACAAGCTTTTAAATATGTAGTTTTGTGATAGATCGTACAAACTATATGTAGTTTTATGAAATTTACTCTTTTTTTTATCTTTAGTCTCGGTTGGTGTTAAAAGATCTTTATTACAGCAATCGAGACTAAAGATCTATTTCTAGTCCCGGTTGGTAACATCAACCGAAACAAAAGATCGGCATGCGCGGCGAAGAGTACAAGGCATGTGCAAGATCGAGGAGGAGACGGGTGGCCTTATCTCTTCCTCTCTAACCTTATCTGTTCCTCTTCCTTCTCTCCTTTTAACTCCTCTCCTCCTTTCCCTCCCCCATCATCCCCACTATGATGGATGAGCCGGGCGGCCGGGCAGCGCGGAGGGCCGGGCGGCCGGAGGCCTCGCGGCGGCGGGCGGCGTGGGAGCAGGCTTTTTTTTCTTTTTTTTAGAATTTATGATTCGGATCTGTGTATTTGATTTGTGTGTGATGTGAATATGTGATGTATTGTGATGAATTTTGTAGAAGTTGTGATGTAATTTTTTTTAAGATTTTGTGATGTATTTGG