| mature miRNA: TAATCTGCATCCTGAGGTTTA species: Brassica rapa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|83822875|gb|CX271098.1|CX271098 39RDBRT_UP_018_G01_05APR2004_003 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence TAATCTGCATCCTGAGGTTTA EST sequence (targeted fragment marked with yellow): ATATTTTCTAGGGTTTGTCTTCCCCTAGAGGGAATGTCAAAGGCGTACGTAGTAGCAGAAGGGATGGATTATTACCAAGAAATGTTGACGTTAGGACAAGACCACACCGGTCGTATTCGGGCAAGCTCGAGCAGGTCCAGGCCAAGGAAGGTACGGATCCGTGAATACAAGATTCCGGATCTAAACGCAGATCCTTGTTTGGATATGGATGAAGAAGACACAGGAGAGGTGGTAGGATTCAGACCTCAGGATGCAGATTATTCACTAAACGTTCCTCAGCTTCCTTACGAGCTAGAGGTCGAGATACTCGCACGCCTCCCGCGTTTCGAGTATTGGAAACTTAAGTTACTTAACAAGCGTTTCTCGCGTTTACTAAAGGAAGGTAAAATCTTCAAGGTGAGGCGTGACCGCGGCGTGGTTGAACCGTCTGTCTTTATGCGGTCCCACGGCGACACGAAATGGACTATGTTCGACAAGAACTTCGAAAATTACCAGGAGGTTCCGGAACTTCCTTTACCTTCCGACAGCTCCCTTCTTCCTTGGAGATAAAGAATCGCTTTGCGCTGGAACGCATTTGATTGTCACTGGGAACGAGGGAGAGAGCATCGCTTTGTGGCGGTACGAGCTGGAGACGAGCAAGTGGTTCAAGGGCCCCG | |||||||||