| mature miRNA: TAGCCAAGAATGACTTGCCTA species: Panicum virgatum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|304529868|gb|HO325058.1|HO325058 CFHB4427.g1 CFHB Panicum virgatum U418 normalized leaf Panicum virgatum cDNA clone CFHB4427 TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): GGGGGACGCTTCCTGAACACAAAGAAAAGTGACAATGGTAATGCTGAACCTAAGAAAGGAGATCAAAACTCCGAGCATCTCCGTGTCCCTCCTGACTTACTACAGCTACGACAGAACGAGGCATGATGTAGTGGTCTTGCATCCTAGAACAGTGGTTTCTGCCCGCAGGCATAGGCACTTGAGAGACCGGACTCCTGCCCCAGCGCCGCGCTGCCATCTTAGCGACCTGCCTTGGTTGTGCAAGGCGGCCCAAGGCTCGTTCACCTGAGTGAGCTTGGTACCAGGTCCTGGCAGAGCGCTCTTGTGGGCGCAGGTGTCCGTATAAGTGTTCAATGCCATGGGTTAGGTCTGCTGTTTTCAGGCAATTCATTCTTGGCTTTCGCATCCCGCCCCTTGTGTGTAACTGGTGTGCTGTAACTTGTAAGTGAAATTAATGTTGTGTTCGCTTGTCGGCGTCCTGCGGAACATCAGTATAATTAAGATCAACTTCGTATCG | |||||||||
gi|198184665|gb|FL897098.1|FL897098 CCGN12912.g1 CCGN Panicum virgatum etiolated seedlings (L) Panicum virgatum cDNA clone CCGN1 TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): CCAAGCATTTTCAATGTTTTTCCTCCTGATAACGGCAGCTTCACTGCAGATGAGGCAGCCAACTTCTCGTATCCAACCATGCAGTACCCATTCCCATGATTGGTCTGCAAGTGTCAAGTTATCTGATGCTGGTGCAACTCTTAATCCACCATGGATGTCTGGAAAGACTTCTTTCTCATGAAAGTCTGCTGCCCTTCTTAACCAAGCCATTCTTGGCTAGTGTCGATCGCAAGCACAGTGCTGGATCAGACTTAATTGGCTACTGCATGCTCCCAAGTGCAGCGGTAGAGCCTACCGTCTGTAACCGGAAGGTCCCGGGTTCGAGCCCCAGTCTCTGCACATTTGTGTGGGTAAGGCTTGGGGCTTAAAGACAATCCTTCCCCAGACCCCGCGCAGTGCGGGAAGCCTACGGCACTGGGTACGCCCTTTTTTATGCTCTCAAGTCCCAACTAGTTGAGCTGATTGCCAAGCTCGGCTTTTCTGCTGAGGATGAATAAGTACTTGGCATGTAAATCTTTGCTTATGTTATCTGTGTGTATTCGCTTCCTGCTTGGTTGCCCTCCTTTAAGAAGACATTTCTGTCAAAACTAGTGTGGATGTCGAGAATATTCGAACCATTGTTAATAATTGCAATATCTCGAGTTGGTGGTTGCTTTGCTGGTTGCTCTCTGCACTATGTTCCTAAGTTCCATTATGAGTTATAAAAAAAAACTCCATTCTGAGC | |||||||||
gi|197974850|gb|FL717204.1|FL717204 CCGB3732.b1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB3732 5', m TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): GCTGGCTGTCTGTAGGCAAATCATTCTTGGCTGTTCTGCAATGGGGTGCGATCCTCCTCATCACCTAGCTACCTACCCATGTCCCTGAAACTCATACGGTGCTGGGTTTCAGGGGTCCTGTGATGCTGGAGCACCCCCATATGCCTGTAACATAGTGTACCCAAAAGCACTGCTGCTTGGTACTGCTTGTTGATAGCAGTGTCTCAGTACGGAATTCTGTGGTGTCAGGTCGATCAGTGTCTGAATAATTGAGGTGTCAGACTTCACAGTTGCTCCAGTTCTTGGAGGTGTGTCTGGGTCTGTTTGAAGCTTTGAGGTCTGAAACTTTGTGCTCGGTGAAGATACTGTGCTAATATGTAAGTCTGGGACCTACGTTCTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC | |||||||||
gi|198082948|gb|FL811737.1|FL811737 CCGG12511.g1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgat TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): ACGAAGATGCTGGTGGAGACGGCAAGGCAATGTTCAGCAACCCGCTTATGCGCCAGGTGGCATCTCCAAGTTCAGAGATCCAGCAGTCAGACCTGGGCAACCCGAGCAGCGTCTCCAGTCTGTCGGGATCAGAGGTGTCAAGCATATATGATCATGAAGATGTGGATCACTTCCACAGCTTTGATCACATCCGCACTCCTTTTTTCACCCCGCTCCCGAGCATCATGGGCAGTGAGCATGGGGTCGGTAACCCCTTCAAGTGGCCAATAGCCTCTGAAGGCTGTTGTGACCTCCTCAGAGCATGACTAGAGGGGTTACCGGACAGCCGAATGCTAGGAACTGGCGACAACCAGCAGATGCTGCTGGATGTTACCAGCTCCGGGCCAGGGATTGTCCCTCCCATCGTTTGGCTGTCGGTAGGCAATTCATTCTTGGCTGAAGGCATTGTGGTTGTCTCTGCTCATCGCCTAATTCTCCTAGAATTTCTATTTCTGGGATCTTGTGATGAGTGGAACACCCGTGCCCCCAAAAATGCTGGTAGTACTAAGCTTCCAGCATCAAACTCGTTCTGCACTAGCAGGTTTCAGTGTTGTTTTCTGAATAAAGCCTGAAACTTTGGACTCGTCTGAAGTTTCAGAGGTACTGGAAGTGGATTATGTTTGGAATCTGATTGTGTGTCAAGACTTGGCTTTGTTAGTGATGAATTGTGATGTGCTTGAAGCTTGTGTGGACATGGTTTGTAATATGTGGTTTGTTGAAAGTTTGAACTCGGT | |||||||||
gi|198207199|gb|FL923982.1|FL923982 CCGO9680.g1 CCGO Panicum virgatum root (H) Panicum virgatum cDNA clone CCGO9680 3', mRNA seq TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): TTGTTGCCCTCGTCGAGAAGCAATCTAAGCAACAAGAGTTGGATCTGCACCCCAACCTTGATTCCCTAACAAAGGAGTCAGCACATCCAAAAAAAGGACTCCGTGAAGAAGAAACACAATAGGATATACAGGAAGGAGCTAGCACTCTCCTTCCTTCTCTTAACAGCTGCAGCTCGGAGCCTGCTTTCGGTCCAAGGCATACATTTCTACTTCCTTCTGTTCCAAGGGGTCTCATTCTTGGTTGTTGGTCTGGATCTAATTGGCGAGCAAATCGAGTGATAGAAGGCAAGTGATGGAATTTATTTTTTGTGGGAGCGGGCCATGCCAGCAAAAGAGCGCTTTGGCCTTTGGGTGAAGAGCAGCATGGTACATTACTGGATGCATACACGACTACACGAGAAGACCTGATTTCGATTATGAGGGGTTATAGTTCGTCAGGGATACTGAAATGGTGGAACCTGGAATTGTAGACTGTAGATATATGGCTCGGGGCTCTGGACTGTGAAAGGCTTGGGGTTCTAATTCTTTTGTAAGAATCTTCATTGGTTAGGTGGGTTATTCTTGGTTGACAGTTTACCATCAAAGGGAGATACTGTTGGGATCCATTTAATTTGGGCAATTGCTACT | |||||||||
gi|198155799|gb|FL867597.1|FL867597 CCGI10440.g1 CCGI Panicum virgatum etiolated seedlings (H) Panicum virgatum cDNA clone CCGI1 TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): GTACCTTGCTCTTCACGGTGACCACGAGGGTGGAAACGTGTCTGCTCATACGACTCACTTGGTCGGCTCTGCGCTTAGCGATCCTTTCTAGCTACAGTGCCGGTCTTCAGGGTCTGGCTGGTCCTCTCCACGGTCTTGCTGCACAAGAAGTGCTCCGCTTCATTCTCGACATGCAGAAGTCTGTTGGCGAGAAGTTCACCGAAGCCGACGTCAACAAGTACCTCTGGAGTGTCCTGAAGTCTGGGCGCGTCATTCCTGGCTATGGCCATGCGGTTCTCAGGAAGCCTGACCCGCGTTTCCAAGCCCTTATGGACTTTGCTGACGCTCGTCCGGAGGTTGCAGCCGACCCCGTGTATCAGCTCGTCAAGAAGAACTCGGAGGTGGCTCCTGGTGTGCTTACAGAGCACGGAAAGACCAAGAACCCCTTCCCCAATGTCGACTCGTCTTCTGGTGTTCTCTTCCACCACTACGGCTTCAAGGAGACCCTCTACTACACTGCTACTTTCGGTGTCAGCCGTGGTCTCGGGCCACTCGCACAGCTCATCTGGGACCGAGCATTGGGTCTGCCCATCGAGCGACCCAAGAGCATCAACCTTCAGGGTATCTTGGACCAGGTCGGTGCTTAGAAGGTCCAGCTTCGGCTTGCTAAAAGTGAATGATGCGACGATACCAGATTTTTTCAGCAATAAGACAATAACAACATGACGAACAT | |||||||||
gi|197974851|gb|FL717205.1|FL717205 CCGB3732.g1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB3732 3', m TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): GCTGGCTGTCTGTAGGCAAATCATTTTTGGCTGTTTTGCAATGGGGTGCGATCCTCCTCATCACCTAGCTACCTACCCATGTCCCTGAAACTCATACGGTGCTGGGTTTCAGGGGTCCTGTGATGCTGGAGCACCCCCATATGCCTGTAACATAGTGTACCCAAAAGCACTGCTGCTTGGTACTGCTTGTTGATAGCAGTGTCTCAGTACGGAATTTTGTGGTGTCAGGTCGATCAGTGTTTGAATAATTGAGGTGTCAGACTTCACAGTTGCTCCAGTTTTTGGAGGTGTGTCTGGGTCTGTTTGAAGCTTTGAGGTTTGAAACTTTGTGCTCGGTGAAGATACTGTGCTAATATGTAAGTCTGGGACCTACGTTCTGTT | |||||||||
gi|198017580|gb|FL759799.1|FL759799 CCGC901.g1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virgatu TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): TCAGCAGCATATCAGTACCCAGATCCTACTACGCTGGCATGATCCTCCTATGGCACTCAAGCGGTGGCTCATTTCCAGCTACCAGGATTATCCCACTCTCGCATGCCATTACCTCTTGAAGTATCGGAGGAGCCTGTTTATGTAAATGCAAAGCAGTACCATGGAATTCTAAGACGAAGGCAATCACGTGCCAAGGCTGAACTTGAGAAAAAGGTGGTCAAAACCAGGAAGCCCTATCTTCATGAATCTCGTCATCAACACGCAATGAGAAGGGCAAGAGGAAATGGGGGACGCTTCCTGAACACAAAGAAAAGTGATAATGGTACTCCGAATGGTAATGCTGAAACTAAGAAAGGAGATCAAAACTACGAGCATCTCCATGTCCCTCCTGACTTACTACAGCTACGACAGAACGAGGCATGAAGTAGTGGTCTTGCATCCTAGAACAGTGGTTTCTTCCCGAGACATAGGCACTTGAGAGACCGGACTCCTGCCCCTGCGCCGCGCTGCCATCTTTGCGACCTGCCTTGGTTGTGCAAGGCGGCCCAAGGCTCGTTCAGCTGAGTGAGCTTGGTACCAGGTCCTGGCAGAGCGCGCTGGGGGCGCTGGTGTCCGTAGAAGTGTCTGATGCCATGGGCAGGTCTGCTGTTTTCAGGCAACTCATTCTTGGCTTTCGCACCCCGCCCCTGTGTTGTAAACTAGTGTGTTTCAAGTGAAACTAATGTTGTGTTCGGTTGTCGGCGTCCTGCGGAACATCTGTATAATTAAGATCAACTTTGTT | |||||||||
gi|198115402|gb|FL841506.1|FL841506 CCGH22372.g1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgat TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): TGGAACTGAACCAATCAATGGTTCAGCAGCATATCAGTACCAGATCCTACTACGCTGGCATGATCCTCCCTATGGCACTCAAGCGGTGGCTCATTTCCAGCTACCAGGAATATCCCACTCTCGCATGCCATTACCTCTTGAAGTATCGGAGGAGCCTGTTTATGTAAATGCAAAGCAGTACCATGGAATTCTAAGACGAAGGCAAACACGTGCCAAGGCTGAACTTGAGAAAAAGGTGGTCAAAACCAGGAAGCCCTATCTTCATGAGTCTCGTCATCAACACGCAATGAGAAGGGCAAGAGGAAATGGGGGACGCTTCCTGAACACAAAGAAAAGTGATAATGGTACTCCGAATGGTAATGCTGAACCTAAGAAAGGAGATAAAAACTACGAGCATCTCCATGTCCCTCCTGACTTACTACAGCTACGACAGAACGAGGCATGAAGTAGTGGTCTTGCATCCTAGAACAGTGGTTTCTTCCCGAGACATAGGCACTTGAGAGACCGGACTCCTGCCCCTGCGCCGCGCTGCCATCTTCGCGACGTGCCTTGGTTGTGCAAGGCGGCCCAAGGCTCGTTCAGCTGAGAGAGCTTGGTTACCAGGTCCTGGCAGAGCGCGCTGGGGGCGCTGGTGTCCGTCGAAGTGTCTGATGCCATGGGCAGGTCTGCTGTTTTCAGGCAACTCATTCTTGGCTTTCGCATCCCGCCCCTGTGTTGTAAACTGGTGTGTTTCAAGTGAAACTAATGTTGTGTTCGGTTGTCGGCGTCCTGCGGAACATCTGTATAATTAAGATC | |||||||||
gi|169668617|gb|FE600122.1|FE600122 CBYX2776.g1 CBYX Panicum virgatum Kanlow callus Panicum virgatum cDNA clone CBYX2776 3', mRN TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): TTCCTCAACACGAAGAAAGAGGGGGGTGGCGCGAACGCGAACGGCGCCGGCAAGACGATGTCAGCGCGCCTCGCCACGTCTCCTAGCACCGAGCCTCCACGGGTGCCGGAGCTCGGCAAGGGCAACAACGGCAGCAACCCGCGCTGCCACTCCCGGAGCAGCGTCTCCAGCCTGTCCGGCTCCGAGGTGACGAGCATCTACGACCACCACGACGACCACGCGAGCCGCCACCAGTACGGCGGCATGGAGCCGCACCTCCGGGCGCCTTCCTTTTTCACCCCGCTGCCGGCCATCATGGACGGTGACCACGGCGGGGCTGCCACCATCCCCTCCTTCAAGTGGGTTGCCAGCGACGGCTGCTGCGAGCTCCTCAAGGCGTGAACCGAGGAGGAGGGGATGGCTACTCAGACGGCCGGCCTTCGCCCCGTTGGCTGGCTGTCTGTCTGTAGGCAAATCATTTTTGGCTGTTCTGCAATGGGTTTTGAACCTCCTCATCACCTAGCTACCTACCCATGTCCCTGAAACTCGTACAGTGCTGGGTTTCAGGGGTCCTGTGATGCTGGAGCTCCCCCATATGCCTGTAACATAGTGTACCCAAAAGCACTGCTGCTTGGTACTGCTTGTTGATAGCAGTGTCTCAGTACGTAATTCTGTGATGTCAGGTCGATCAGTGTCTGAATAATTGAGGTGTCGGACTTC | |||||||||
gi|304465626|gb|HO262950.1|HO262950 CCTY1756.g1 CCTY Panicum virgatum Kanlow normalized leaf Panicum virgatum cDNA clone CCTY175 TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): TAAGACGAAGGCAGTCACGTGCCAAGGCTGAACTTGAGAAAAAGGTGGTCAAAACCAGGAAGCCCTATCTTCATGAGTCTCGTCATCAACACGCAATGAGAAGGGCAAGAGGAAATGGGGGACGCTTCCTGAACACAAAGAAAAGTGACAATGGTACTCCGAATGGTAATGCTGAACCTAAGAAAGGAGATCAAAACTCCGAGCATCTCCGTGTCCCTCCTGACTTACTACAGCTACGACAGAACGAGGCATGATGTAGTTGGTCTTGCATCCTAGAACAGTGGTTTCTGCCCGCAGGCATAGGCACTTGAGAGACCGGACTCCTGCCCCAGCGCCGCGCTGCCATCTTAGCGACCTGCCTTGGTTGTGCAAGGCGGCCCAAGGCTCGTTCACCTGAGTGAGCTTGGTACCACGCCCTGGCAGAGCGCTCTTGTGGGCGCAGGTGTCCGTATAAGTGTTCAATGCCATGGGTTAGGTCTGCTGTTTTCAGGCAATTCATTCTTGGCTTTCGCATCCCGCCCTTGTGTGTAACTGGTGTGCTGTAACTTGTAAGTGAAACTAATGTTGTGTTCGCTTGTCGGCGTCCTGCGGAACATCTGTATAATTAAGATCAACTTCGTATTGACTCCGTATTGCTGTGAATTTGAGCTGTAAACATGGCCAAAGCTG | |||||||||
gi|198126707|gb|FL852948.1|FL852948 CCGI2457.b1 CCGI Panicum virgatum etiolated seedlings (H) Panicum virgatum cDNA clone CCGI24 TAGCCAAGAAT-GACTTGCCTA EST sequence (targeted fragment marked with yellow): CTCACCGCAGCGAGAGGAGAGAGAGAGAGAGAGAAAGAGGGCTAGGGTTTCGTGCTCCCCCACGCCTCACGCATCGAATCCGAGCCGGATCGGGGGGCGCGCGGAGTCGCCGGCGTCCCGGCGGCGCCTGGGCTGTTTGCAATGGCATCTGGAACTGATGACAAAGCTAAGATGGAGGGTTTGACATCAGCTGCAGCCTTTGTAGAGGGTGGCATTCAGGATGCATGCGATGATGCATGTAGCATTTGCCTTGAGGCTTTCTGTGAGAGTGACCCTTCTGCATTGACCAGCTGCAAACATGAGTTCCATCTCCAATGCATTCTGGAATGGTGTCAGAGAAGTTCACACTGCCCAATGTGTTGGCAGCCAATTAGTATGAAGGATCCTACCAGGCAAGTTAATTCTTGGCTATGCAAATATGATGCTTGCCATTTTGGTCCTCTCAGGCTAGTTACTTATTGGCTAATTTTTAACATGGCTGATGTTTCAGCCAGGAGCTGCTTGAGGCAGTAGAACGCGAGAGGAACATAAGAACCAATCAAACTCGAAACACAACTATATTCCATCATCCTGCTCTTGGGGATTTTGAGCTGCAGCATTTACCTGTTGTTGGTAATGATGCTGAGCTTGAAGAGCGTATACTACAGCATCTAGCGGCTGCCGCTGCAATGGGAAAGGGCACACCATCTTGGAAGAAGGAGGGGCACAGGGGCCGTTCTGGCTCTCATGGTCGCCCACAGTTCCTAGTTTCTCTGCTCATCCAAATTCACCTTCTGCCGGCACATTT | |||||||||
gi|198123003|gb|FL848744.1|FL848744 CCGH26720.g1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgat TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): TCGACGGGTGCCGGGGCTCGGCAAGGGCAGTGACGGCAGCAACCACGCTGCCAGTCCCGGAGCAGCGTCTCCAGCCTGTCCGGCTCCGAGGTGTCGAGCATCTACGACGACCATGCGAGCCGCCACCAGTATGGCGGCATGGAGCCGCACCTCCGGGCGCCGTCCTTATTCACCCCGCTGCCGGCCATCATGGACGGCGACCACGGCGGGGCTGCCGCCATCCCCTCCTTCAAGTGGGCAGCCAGCGACGGCTGTTGCGAGCTCCTCAAGGCGTGAACCGAGGAGGGGATGACTACTCAGACGGCCGGCCTTCTCCCCGTTGGCTGGCTGTCTGTAGGCAAATCATTCTTGGCTGTTCTGCAATGGGGTGCGGTCCTCCTCATCACCTAGCTACCTACCCATGTCCCTGAAACTCATACGGTGCTGGGTTTCAGGGGTCCTGTGAC | |||||||||
gi|198002768|gb|FL747483.1|FL747483 CCGC2611.g1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virgat TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): GCAGGAGCTCGGCAAGAGCAACAACGGCAGCAACCCGCGCTGCCACTCCCGGAGCAGCGTCTCCAGCCTGTCCGGCTCCGAGGTGTCGAGCATCTACGACCACCACGACGACCACGCGAGCCGCCACCAGTACGGCGGCATGGAGCCGCACCTTCGGGCGCCTTCCTTCTTCACCCCGCTGCCGGCCATCATGGACGGTGACCACGGCGGGGCTGCCACCATCCCCTCCTTCAAGTGGGCTGCCAGCGACGGCTGCTGCGAGCTCCTCAAGGCGTGAACCGAGGAGGAGGGGATGGCTACTCAGACGGCCGGCCTTCGCCCCGTTGGCTGGCTGTCTGTTTGTAGGCAAATCATTCTTGGCTGTTCTGCAATGGGTTTTGAACCTCCTCATCACCTAGCTACCTACCCATGTCCCTGAAACTCGTACAGTGCTGGGTTTCAGGGGTCCTGTGATGCTGGAGCTCCCCCATATGCCTGTAACATAGTGTACCCAAAAGCGCTGCTGCTTGGTACTGCTTGTTGATAGCAGTGTCTCAGTACGTAATTCTGTGATGTCAGGTCGATCAGTGTCTGAATAATTGAGGTGTCGGACTTCACAGTTGCTCCAGTTCTCGGATTGGAGGTGTGTCTGGGTCTGTTTGAAGCTTTGAGGTCTGAAACTTTGTGCTCGGTGAAGATACTGTGCTTAATGTGTAAGTTTGGGACCCGTTCTGCTATCATGTCGGTTGTTGC | |||||||||
gi|198229745|gb|FL946594.1|FL946594 CCGP14643.g1 CCGP Panicum virgatum root (L) Panicum virgatum cDNA clone CCGP14643 3', mRNA s TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): TCTTCACGAGTCTCGCCACCTCCACGCAATGCGCCGGGCAAGAGGCTCCGGCGGGCGCTTCCTCAACACGAAGAAAGAAGGGGGCTCGAGTGCGAACGGCGCCAGCAAGACGGTGTCAGCGGCGCCGGCTGCGCGCCTCGCCACGTCTCCCAGCACCGAGCCTCGACGGGTGCCGGGGCTCGGCAAGGGCAGTGACGGCAGCAACCCGCGCTGCCAGTCCCGGAGCAGCGTCTCCAGCCTGTCCGGCTCCGAGGTGTCGAGCATCTACGACGACCATGCGAGCCGCCACCAGTACGGCGGCATGGAGCCGCACCTCCGGGCGCCGTCCTTCTTCACCCCGCTGCCGGCCATCATGGACGGCGACCACGGCGGGGCTGCCGCCATCCCCTCCTTCAAGTGGGCAGCCAGCGACGGCTGCTGCGAGCTCCTCAAGGCGTGAACCGAGGAGGGGATGACTACTCAGACGGCCGGCCTTCTCCCCGTTGGCTGGCTGTCTGTAGGCAAATCATTCTTGGCTGTTCTGCAATGGGGTGCGATCCTCCTCATCACCTAGCTACCTAACCATGTCCCTGAAACTCATACGGTGCTGGGTTTCAGGGGTCCTGTGATGCTGGAGCACCCCCATATGCCTGTAACATAGTGTACCCAAAAGCACTGCTGCTTGGTACTGCTTGTTGATAGCAGTGTCTCAGTACGGAATTCTGTGATGTCAGGTCGATCAGTGTCTGAATAATTGAGGTGTCAGACTTGCAC | |||||||||
gi|169710658|gb|FE640551.1|FE640551 CBYZ2936.g1 CBYZ Panicum virgatum Kanlow 4 day old seedlings Panicum virgatum cDNA clone CBY TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): GGAATTTTAGACGAAGGCAGTCACGTGCCAAGGCTGACTTGAGAAAAAGGTGGTCAAAACCAGGAAGCCCTATCTTCATGAGTCTCGTCATCAACACGCAATGAGAAGGGCAAGAGGAAATGGGGGACGCTTCCTGAACACAAAGAAAAGTGACAATGGTACTCCGAATGGTAATGCTGAACCTAAGAAAGGAGATCAAAACTCCGAGCATCTCCGTGTCCCTCCTGACTTACTACAGCTACGACAGAACGAGGCATGATGTAGTTGGTCTTGCATCCTAGAACAGTGGTTTCTGCCCGCAGGCATAGGCACTTGAGAGACCGGACTCCTGCCCCAGCGCCGCGCTGCCATTTTAGCGACCTGCCTTGGTTGTGCAAGGCGGCCCAAGGCTCGTTCACCTGAGTGAGCTTGGTACCAGGTCCTGGCAGAGCGCTCTTGTGGGCGCAGGTGTCCGTATAAGTGTTCAATGCCATGGGTTAGGTTTGCTGTTTTCAGGCAATTCATTCTTGGCTTTCGCATCCCGCCCTTGTGTGTAACTGGTGTGCTGTAACTTGTAAGTGAAACTAATGTTGTGTTCGCTTGTCGGCGTCCTGCGGAACATCTGTATAATTAAGATCAACTTCGTATTGACTC | |||||||||
gi|198094322|gb|FL821888.1|FL821888 CCGG18105.g1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgat TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): GCCAACAGCCTCTGAAGGCTGTTGTGACCTCCTCAGAGCATGACTAGAGGGGTTACCGGACAGCCGAATGCTAGGAACTGGCGACAACCAGCAGATGCTGCTGGGTGTTACCAGCTCCGGGTCAGGGATTGTCCCTCCCATCGTTTGGCTGTCGGTAGGCAATTCATTCTTGGCTGAAGGCATTGTGGTTATTTCCGCTTATCGCCTAATTCTCCTAGATATTCTATTTCTGGGATCTTGTGATGAGTGGAACACCCGTGCCCCCAAAAATGCTGGTAGTACTAGCTTCCAGCATCAAAGTCGTTTTGCGCGAGCAGGTTTCAGTGTTGTTTTTCTGAATAAAGCTTGAAACTTCAGATTAGGTACTGGAAGTGGAGTATATTTCTGAGTCTGATTGTGTGTCAAGACTTGGCTTTTGTTAGTGATGAATTGTGGTGTGCTTGAAGCTTGTGTGGACATGGTTTGTAATATGTGGTGTGTTGAAAGCTTGAACTCGGTAATGTAATGATGTATTTGACTACTG | |||||||||
gi|169704304|gb|FE631278.1|FE631278 CBYY10072.g1 CBYY Panicum virgatum Kanlow crown Panicum virgatum cDNA clone CBYY10072 3', mR TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): CGCCGCGCTGCCATTTTAGCGACCTGCCTTGGTTGTGCAAGGCGGCCCAAGGCTCGTTCAGCTGAGTGAGCTTGGTACCAGGTCCTGCCAGAGCGCGCTGGGGGCGCTGGTGTCCGTAGAAGTGTTTGCTGCCATGGGCAGGTCTGCTGTTTTCAGGCAACTCATTCTTGGTTTTTTTTTCCCCCCCCCCCGTTGTAAAAAGGGGTGTTTCAAAGGAAAAAAATTTTGGGTTC | |||||||||
gi|198161787|gb|FL876041.1|FL876041 CCGI9664.g1 CCGI Panicum virgatum etiolated seedlings (H) Panicum virgatum cDNA clone CCGI96 TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): TCTCCAGTCTGTCAGGCTCAGAGGTGTCAAGCATATATGATCATGAAGATGTGGATCACTACCACCAGCTTTGATCACCTCCCGCACTCCCGTTTTCACCCCCGCTCCCGAGCATCATGGACAGTGAACATGGGGTCGGTATCCCCTTCAAGTGGCCAAACAGCCTCTGAAGGGCTGTTGTGACCTCCTCAGAGCATGACTAGAGGGGTTACTGGACAGCCGAATGCTAGGAACTGGCGACAACCAGCAGATGCTGCTGGGTGTTACCAGCTCCGGGTCAGGGATTGTCCCTCCCATCGTTTGGCTGTCGGTAGGCAATTCATTCTTGGCTGAAGGCATTGTGGTTATTTCCTCTTATCGCCTAATTCTCCTAGATATTCTATTTCTGGGATCTTGTGATGAGTGGAACACCCGTGCCCCCAAAAATGCTGGTAGTACTAGCTTCCAGCATCAAACTCGTTTTGCGCGAGCAGGTTTCAGTGTTGTTTTTCTGAATAAAGCTTGAAACTTCAGACTAGGTACTGGAAGTGGAGTATATTTCTGAGTCTGATTGTGTGTCAAGACTTGGCTTTTGTTAGTGATGAATTGTGGTGTGCTTGAAGCTTGTGTGGACATGGTTTGTAATATGTGGTGTGTTGAAAGCTTGAACTCAGTAATGTAATGATGTATTTGACTACTGAGACTTTGGGCTTGGTTTGT | |||||||||
gi|198073516|gb|FL799603.1|FL799603 CCGG2580.g1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgatu TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): CAAAACAGTCAATTTATGCAGTATCCTCCAGCTCAGCCCACTTACAATGGACATTACGATGTAGCTGCTCTGCCAGGTCCTGTGGAACCAACAATGCCAAGCATTTTCAATGTTTTTCCTCCTGATAACGGCAGCTTCACTGCAGATGAGGCAGCCAACTTCTCGTACCCAACCATGCAGTACCCATTCCCATGATTGGTCTGCAAGTGTCAAGTTATCTGATGCTGGTGCAACTCTTAATCCACCATGGATGTCTGGAAAGACTTCTTCTCATGAAAGTCTGCTGCCCTTCTTAACCAAGCCATTCTTGGCTAGTGTCGATCGCAAGCACAGTGCTGGATCAGACTTAATTGGCTACTGCATGCTCCCAAGTGCAGCGGTAGAGCCTACCGTCTGTAACCGGAAGGTCCCGGGTTCGAGCCCCAGTCTCTGCACATTTGTGTGGGTAAGGCTTGGGGCTTAAAGACAATCCTTCCCCAGACCCCGCGCAGTGCGGGAAGCCTACGGCACTGGGTACGCCCTTTTTTATGCTCTCAAGTCCCAACTAGTTGAGCTGATTGCCAAGCTCGGCTTTTCTGCTGAGGATGAATAAGTACTTGGCATGTAAATCTTTGCTTATGTTATCTGTGTGTATTCGCTTCCTGCTTGGTTGCCCTCCTTTAAGAAGACATTTCTGTCAAAACTAGTGTGGATGTCGAGAATATTCGAACCATTGTTAATAATTGCAATATCTCGAGTTGGTGGTTG | |||||||||
gi|304506219|gb|HO301257.1|HO301257 CFCB1404.g1 CFCB Panicum virgatum WS4U normalized leaf Panicum virgatum cDNA clone CFCB1404 TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): CTTGAGAAAAAGGTGGTCAAAACCAGGAAGCCCTACCTTTCATGAGTCTCGTCATCAACACGCAATGGGAAGGGCGAGAGGAAACGGGGGACGCTTCCTGAACACAAAGAAAACTGACAATGGTTCTCCCAACGGTAATGGTGATCCTGAGAAAGGAGACCAACACTCGGAGCATCTCCATGTCCCCCCTGACTTACTACAGCTACGACAGAACGAGGCATGAAGTAGGGGTCTTGCATCCTAGAACAGTGGTTTCTGTCCACAGGCATAGGCACTTGAGACCGGATTCCTGGCCCTGCACCGCGCTGCCATCTTAGCGACGTTGCATTCATTGTGCAAGGCTTTCCAAGGTTCGTTCACCTGAATGAGCTTGGTACCAGGTCCTGGCAGAACGCAATGCGGGCACAGGAGTCCATGGGAGTGTCCAATGCTATGGGTAGGTCTGCTGTTTTCAGGCAATTCATTCTTGGCTTTCACATTCCGCCCTTGTGTGTACAACTGGTGTGTTGTAATTGAAACTAAGGTTGTGTTCGCTTGTCAGCGTCCCGTGGAACAACTGTATAATTAAGATCAACTTCGTATTAAGGGGGTGCTTGGTTCCCAGCCACAGTTTGCCACATCTAACCTTAGGCAAGTTTGAACAAGGTGGCAAGTGTTTGGTTGGACATCTAATGGCAGGATTCTTTAGGCTCCACATGTCATAGAAACAAAAAGTATGGTAAGATTCTCTTTGCCATGGC | |||||||||
gi|304506838|gb|HO306196.1|HO306196 CFCB4693.g1 CFCB Panicum virgatum WS4U normalized leaf Panicum virgatum cDNA clone CFCB4693 TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): TTTTCAGGCAATTCATTCTTGGCTTTCACATTCCGCCCTTGTGTGTACAACTGGTGTGTTGTAATTGAAACTAAGGTTGTGTTCGCTTGTCAGCGTCCCGTGGAACAACTGTATAATTAAGATCAACTTCGTATTAAGGGGGTGCTTGGTTCCCAGCCACAGTTTGCCACATCTAACCTTAGGCAAGTTTGAACAAGGTGGCAAGTGTTTGGTTGGACATCTAATGGCAGGATTCTTTAGGCTCCACATGTCATAGAAACAAAAAGTATGGTAAGATTCTCTTTGCCATGGCAAAGTGTGGCTTCAAATTTATTTGTCACACTTTTTGTGGCTTGCCACACTTGCCAAAGATTAGGTGTGGTAAATAGTGGCTAGCAACTAAACATGCCCTGTGTTGCTGTGAATTTGAACTGTAACAATGCTACAGCCGAGCCAGTTATTCAGATGTAGCAACTCATGTTGGGC | |||||||||
gi|198004185|gb|FL749316.1|FL749316 CCGC3606.g1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virgat TAGCCAAGAATGACTTGCCTA EST sequence (targeted fragment marked with yellow): CGGCGCCATCAGCGCGCTCGCACGTCTCCTAGCACCGAGCATCCACGGGTGCCGGAGCTCGGCAAGGGCAACAACGGCAGCAACCCGCGCTGCCACTCCCGGAGCAGCGTCTCCAGCCTGTCCGGCTCCGAGGTGTCGAGCATCTACGACCACCACGACGACCACGCGAGCCGCCACCAGTACGGCGGCATGGAGCCGCACCTCCGGGCGCCTTCCTTCTTCACCCCGCTGCCGGCCATCATGGACGGTGACCACGGCGGGGCTGCCACCATCCCCTCCTTCAAGTGGGCTGCCAGCGACGGCTGCTGCGAGCTCCTCAAGGCGTGAACCGAGGAGGAGGGGATGGCTACTCAGACGGCCGGCCTTCGCCCCGTTGGCTGGCTGTCTGTCTGTAGGCAAATCATTCTTGGCTGTTCTGCAATGGGTTTTGAACCTCCTCATCACCTAGCTACCTACCCATGTCCCTGAAACTCGTACAGTGCTGGGTTTCAGGGGTCCTGTGATGCTGGAGCTCCCCCATAGTGTACCCAAAAGCGCTGCTGCTTGGTACTGCTTGTTGATAGCAGTGTCTCAGTACGTAATTCTGTGATGTCAGGTCGATCAGTGTCTGAATAATTGAGGTGTCGGACTTCACAGTTGCTCCAGTTCTCGGATTGGAGGTGTGTCTGGGTCTGTTTGAAGCTTTGAGGTCTGAAACTTTGTGCTCGGTGAAGATACTGTGCTTAATGTGTAAGTTTGGGACCCGTTC | |||||||||