| mature miRNA: TAGCCAAGGACGACTTGTCCG species: Populus tremula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|60708501|gb|DN498311.1|DN498311 S016A03.5pR Populus imbibed seed cDNA library Populus tremula cDNA clone S016A03 5', mRNA seq TAGCCAAGGACGACTTGTCCG EST sequence (targeted fragment marked with yellow): GGTCCCATCTTTCTCCTCTATCTTCCCATCCTCCCCAGCTCTCCTTCTACGTCTGCAAATTAAGCAAAGTGTCCCTGTTTCTTGCTTCAGTTGCTGTAGTTTCACTGTAACAGCCTTCCATGGAGGATCATAAAGATTGATGCAGCCAAGGATGACTTGCCGACGACTCGCTTTTGCTTTTGCTTCCATCAATATAGGCATAATCAAGAAGAGATGAATCCGTTGGCAGGTTGTTCTTGGCTACATTTTTCTTTCTGCTCCTCATGCCAAGCTTATGGTGATTATCCTGTGAACTTGCAAGGATCGCCTTCAAGATCACTGCTTCACTGATATGAAAATCATATGGTAATGTAATATAATATCATCAACATGGAAATTAACCTCCAGTTGTTATCTTCTTAATCTCCCTCTTAATACATGGAAATCATGATTATCATGAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|60698437|gb|DN488619.1|DN488619 S016A03.3pR Populus imbibed seed cDNA library Populus tremula cDNA clone S016A03 3', mRNA seq TAGCCAAGGACGACTTGTCCG EST sequence (targeted fragment marked with yellow): GGTCCCATCTTTCTCCTCTATCTTCCCATCCTCCCCAGCTCTCATTATAGGTGTGCAAATTAAGCAAAGTGTCCCTGTTTCTTGCTTCAGTTGCTGTAGTTTCACTGTAACAGCCTTCCATGGAGGATCATAAAGATTGATGCAGCCAAGGATGACTTGCCGACGACTCGCTTTTGCTTTTGCTTCCATCAATATAGGCATAATCAAGAAGAGATGAATCCGTTGGCAGGTTGTTCTTGGCTACATTTTTCTTTCTGCTCCTCATGCCAGGCTTATGGTGATTATCCTGTGAACTTGCAAGGATCGCCTTCAAGATC | |||||||||