| mature miRNA: TAGGTTATTGATTTGACCAAC species: Brachypodium distachyon database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|78016882|gb|DV485269.1|DV485269 5363_G12_M23Z_084 Brachypodium distachyon leaf EST library Brachypodium distachyon cDNA clone TAGGTTATTGATTTGACCAAC EST sequence (targeted fragment marked with yellow): CCACGCGTCCGGAAGGAATTTGGAGTCCCTGATATGGTCAAATCAATGGCCTGGTGTGGTGACAACATATGTCTCGGGATAAGACGGGATTATATGATCATAAATAGCATGACCGGGGCATTAACTGAAGTTTTTTCTTCTGGGAGGATTGCTCCTCCTTTAGTTGTGCCTCTCCCTACTGGGGAGCTCCTCCTTGGAAAGGATAACATTGGAGTATATGTCGATCAAAACGGGAAACTTCTCCACGACGGCAGGATAATTTGGTCAGACACGCCTGCCTCTGTTGTTATACATAGACCGTATGCCGTGGCACGCCTGCCACGGCACATTGAGATACGGTCTCTTAGAGCTCCCAACGCATTGGTTCAGATGGTTGTCCTCCGTGATGTTCAAAAGCTTGTTCAAACTGACAACTGTATACTTGCTGCGCTATCCAACTCTGTCTATGGTTTGCTGCCTGTTCCTATTGGTGCCCAGATAGTGCAATTGACCGCCTCTGGGGAATTTGAGGAGGCACTAGCATTGTGTAAGCTACTTCCTCCGGAGGATTCAAACTTACGAGCTGTAAAAGAAAGCTCAATACACATGAGATATGGGCACTTCTTATTTGATAATGGGAGCTATGACGAAGCAATGGAGCAGTTTTCGAATTCACACGTGGATATTACTTATGTGTTATCTCTATTCCCATCCCTTGTTCTGCCTCAAACACATATTATAGGTGAACATGACAAGCTCCAAGACCTGCC | |||||||||
gi|270468409|gb|GT849261.1|GT849261 CCYP7238.b1 CCYP Brachypodium distachyon leaf + leaf drought Brachypodium distachyon cDNA cl TAGGTTATTGATTTGACCAAC EST sequence (targeted fragment marked with yellow): GGGTTGTTCCATCTTCCGTTTGGAGCAGCCTGCGGCTGTCGCTTGGGAACTGGAAGGTTGATGAAATCGATAACCTTATTGAGATAGTAAAGCAAGCAGCAAAAGAAGGGGCACTGCTTCTATATACACTTGCTGATCCTTCAATGGCTGAGGCAACTAAGAAGGCTTGTGATCTTTGGGGTGTTCCATCCACTGATGTTCTTCGTCCTACTATTGAAGCCATAGCTTCTCACATCGGTGTTGCTCCATCTGGGATTCCCCGAAGTTCTGCTAGCCGAAAAGGTCAACTTTCTGAGGATTACTTTGAAAGAATTGAAGCGATTGATTTCACCATCAAACAAGATGATGGTGCTCAGCCAAAGAACCTTGCCCGTGCACACATTGTGCTTGTTGGTGTTTCACGTACTGGGAAAACACCACTGTCAATTTATCTAGCACAAAAAGGATACAAAGTGGCAAACGTCCCAATTGTGATGGGAATTGATCTTCCGAAGGCTCTTTTTGAGATTGACCCGGATAAGATTTTTGGATTAACAATAAACCCAGTGGTTCTTCAGGCAATTAGAAAGGCAAGAGCCAACACTCTGGGGTTTCATGCACAAAATAGCAACTATGCTGAAATGGAGCATGTGAGGCAGGAGTTAGACCATGCAAATCAAATTTTTGCTCGGCATCCAATATGGGCCAGTCATTCATGTTACTGGAAAAGCTATAGAAGAAACAGCTGCTGTCATTGTTAGGATATACCATGACAGGAAACAGAGTGCTCCATG | |||||||||