| mature miRNA: TCAGCCAAGGATGACTTGCCG species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|73884445|gb|DT487183.1|DT487183 WS02533.B21_A01 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02533_A01 3', mRNA sequence TCAGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): CATGCTTTTATTCACCCCCATTGGGGTTCTCATATGGGGGGGAGGACAGCTGGACGAGTCCCCCTCCCTGTTGATTTTGCAGATGATGGCCCAATTTATGTTAATGCTAAACAGTCCCGTGGAATTATCAGAAGGAGACAATCCCGGGCAAAGCTTGAGGCTCAAAACAAACTGGTAAAAAATCGAAAGCCATACCTTCACGAGTCTGGGCACATTCATCCCTTAAATAGGGTTCGAGGATTTGGGGGACGCTTTTTCAGCAAAAAAAAGCTCCAGGAATCTGATCCCCCTCCTAGTCAGGGTAATGTCCCAGATCCCATCCCCTCCCCCGTAAAAAATGATGCATCAGAACTAGAAAGCTATCAGTCTGGAACCGGACAATTTGGTGCCTCAAATACTCCCTGCTCTGACATCCCCAGTGTTTCCTACACCAATGTCACTTTTAGGCACCCAAAACCCCGGTTTTCAGGTATTGCTACTCCCCTTGGGGGAGGCATGGAAATCAACAGTAGGCTTATTTGCAGAGGAACCCAACCCCCCCCTTCCGTTGTTCAGGGAAAATATGGAAGAAGCCCGGGTAATCGGTCAGGCAATTCATCCTTGGCTTGGTTTTTTTTACTAAAAACAAAATGTCCCCGACGGCCCCTGTTATGTATTTGATCTTTCTGGGGTTTGCTTTTTTTTTTTTTTGTTTAAACATCCTCGGGCATGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAA | |||||||||