| mature miRNA: TCAGGTTATAAGACTTTCTAG species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|88251383|gb|CI349811.1|CI349811 CI349811 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): CCGTAGTAAAGCACGGCCCCATTGCTAGTTACAGCAAATATACAAATATACAGTGTTGCGACTCATTGTCCAAAAGCAAATATAGATTCTTCTGTTATTACAATGACTAGACAAACTTGTAACCTGAATAATGATCCCCTTCTCATCCATATTAAGCCTTGTTCAGAGGGATTGGAGGGGTTCGAGGATAAATAATTCCACACCTCAATATATGTCAATAAATCCCCTCCAAATCTAACAGCAGAGCTATATCATCACCATTGTCTTCATCATAAAATAGAGTCGTCATTCAGAATCTTTGTAAGATTTGGATTCCTTCCATGATCAAAATATATGAAATCTGACTCTAGCAGGCCTTTATCTTTATCTTTACTAAGACTGCACGAAGCAGAACCAAACACATCAATAGCAGCATTAACATCATAAACTTCAGTGGCGTC | |||||||||
gi|29625998|gb|CB631009.1|CB631009 OSIIEb08E17.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb08E17 5', mRNA sequence TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): ATCAAATCAATAATTGAATATATTTTCATAATAAATTTATTTTGGGTTAAAAATGTTACTGTTTTTTCTATAAACTTGGTCAAACTTAAAGCAGTTTGACTTTAACCAAAGTCAAAACGTCTTATAACCTGAAATAGATGGAGTACTAGACACCACATCAATTAGAATATTCATTTACTGTCAATTAAATAAGAGAAAAAATTATGAAGTTTTAGAAATACCCCTAGTGCCATACGTCCACACGTCAGTTCTCCCATCTCTCTCTCTTTACCTCGATCACTTTGTATCTCTTTGCTTCACAAATCAAGAAGTTTATCTTTTAATAACACTTACATACTCATCTATCAATATTACTTTGTTGTTAACGTGTGGCGCTATGGTCTTTTCTCTCTATATATTAAATTTTTCTTGAGAGATGTTTGAAATTTATTTTGGGATAGGAGTTGCTAGCTGTGCCACTTTTCCTGTAAAATCCAAACAAGCCCTGGAAATTGGTGTGAGGGGGAGCTAGCCAAGAGCACCAATCCAATCCAAGAGGGGTCAGGTCGATCAGTAGCCTGTTCAGGCTCGCAGAAGGTTTTGGAAAGCTGTACAAGCTAGATGAGCTTTTTGCTCGGATATCCACGCATATGCATGTCAAACTCTCTATTCATACATTAAGGGGTGTCCCCTTATTTCTGCATATCACTTAAAATATCATCATTTTTTAAAAAAATAGTAAAATATATCGATATGTTATATTTAAGCCACTCCACAAGCATGTATATTCAAATTCAACAACAAAAATAATAAACTTGAAGATGAATATAACATGTAATTTGCGGTCAAATTTGTTACTTTCATC | |||||||||
gi|29681180|gb|CB677455.1|CB677455 OSJNEe14G14.f OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe14G14 5', mRNA sequence TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): ATTCGTCGTTCGTTTTGTGCATCCATCCAGAATTCGTTCCAGATCCAGCCAGCCAGCCATCTCAAGCTTCTCTCTTCTCTTGTTATTAAGAGCAAGCAAACAGTAGTCTAGCGAAGCGAGACTGCGAGAGCAGAGCATTGTTCTTCTTCTCTAGCTATTAGTGGTGGGGAATAATGGCTCCCGCCACCACCGCAGCAATGGCCCTCGCGCCGCCTCCTTCCCATCACCATCACCATCACCATGTCAAGCAGCTGCAGCTCCCTCCGTCTGTCTCCGTCTCCGTGCCCCTCCGCTCCGGTTTCCTTGGCCGCGCACTGCCTGCTGCTGCCCACCCACAGCCGCTGCTCGCCGCCGAGAGCCGCCGCAGCAGCGCCGTGTCCGTGCGGATGTCGTGGGACGGGCCCCTCTCCTCGGTCCGCCTCATTATGCAGGGCCGCAACGTCAAGGTTCTCCTCTCCTACTGCTACCACTAGTTTGCTTCCCTGGAATTTCCTTCGTTTCATATTATAAGGTTTTCTAGCATTACTCATATTCACATATATATATATATGATAATATTCTAGATTCATTATCATATATATGATTATAGGTAATGCTAGAAAATCTTATAACCTGAAACAGAGGGAGTATATATAATTCGGTAATGGAACTAGAGTATTTGTTTTATTAATTGGACCTTTATGAAATACTAGTAGAATTCAACGAAACTACATTCTTCTTTATTGGTTATATTAGTAGTAATTTGCTTCACTAGAATTCTATTTTATACTAGAGAGATTAAAAATTATTACAAAACTAACTGTATACCCGTTGCAACGGAATAGTAATATGGACCTATTACTTATTACTACCTCCATA | |||||||||
gi|117231808|gb|CT853983.1|CT853983 CT853983 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): TTGTATACCGTACCTCTCTCTTGTGTGTATTTACCATCTTAAGATTCTTGAGAACAATTCCTTCGTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAAAAAAAAAAAAAAAAAAAGAGCAGAGCATTGTTCTTCGGGGGGACCTATTACCGATGGGGAATAATGGGTCCCGATACCACCGCACCAATGGCCCTCGTTTTACCACCTTCCCATCAGGAAAAACCATCACCATGTCCCAACATATGCAGCTTCCTCCAACTGTCTCCTTCTCCGTGCCGCTCCAATCCGAAAAAGTTGGCCGCGCACTGCCTGCTGCAACCCACCCACAGCCGATGCTCGAAGGGGAGAGCCCCCGCGCAGCGCCTTGTCCGTGCGGATGTCGTGGGGATAGGCCCCTCTCCTCCGTCCACCTTATTATGCACGCCCGCAACCTCAACGTTCTCCTTTCTTACTGCTATTACTAGTTTGCTTCCCTGGATTTTCCTTCGATTCATATAATAAGGGTTTCTATTATTACTCATATTTACATATATATATATATGATAATATTAAAAATTCATTATCATATATATGATTATAGGTAATGCTAGAAAATCTTATAACCTGTTACAGACGTAGTATATATAATTCAGTAATGTAAATAGAGTATTTGTTTTATTAATTGGACCTATATGAAATACTAGTAGAATTCAACTAAACTACATTCTACGGTATTGGTTATATTAGTACTAATTGGCTAAAATAGAATTCTATTTATAAAAATTAGATTAAAAATCATTAAAATCTAACTGTATACACTTGGCTGCGAATTTGTGAGAAAAAGCTACTACAACCACTAACTTTATATTTTAAAATAACATCCCATTAATTTTCCGTCAAGAAAAAACCACCCATAAAAATAATAAAATTATGAAAAAAAAAAAAATTTTATATTACCTGTTTCCGCTTCCCCCATTTTTTTCATTTTGGACGAAATTTTTCTTTCATTTTTTTAACAAAAAAAAAAAAAAAGGGAAAAATAGAAATATCAGAAAAAAATCTTGTGGGGGCAAAAAAAGGGTTAAAAACTAAAAAAATTAAATACCACAACCGCCGGCAAAAAAACCTTTATTAAAAATTTTTCCCCCCCCAAAAAAAAAATTTTTCCTAATAAGGGTGAAAAACACTTTTTTAAATAAAATTTTCCTTTTTTTGTTTGGGGGGGCGGCGGCCCGCCTCTTTA | |||||||||
gi|89196177|gb|CI397179.1|CI397179 CI397179 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): ACAGTTAATATTCCATCCTTATAACTGTAAATATCTCAAACACATCTTAAAATATATGCCCACGCGAATGCGCGGACTACCTTCCTAGTTCATATGAACGTGGGTAATGCTAGAAAGTCTTATAACCTGAAACGGAGTGAGTATAAAATACTACCATGATGCACGATATGGTATACTCTATAACAAGCCATAAACAAACGCGAGAAGAAGATCAAGGTTAATGGATCCGAGAATGAGCCGTCGCAACTTGCAAGAACCGGAGCACGGCGGCGCGGAGGAAGAAGACCGTCTTGTTGCTGCCGGCGACGGCGAGGCCTACGTGGCTACGTGGGTGGTCGACGACATCTCCGACAAAGTCCTCGAGCTCGTCCTGCTGCGCCTCCACTCCGATCCGCCGCCTGCCTCATCCGCGCCGCGTCCGTCT | |||||||||
gi|88489324|gb|CI426596.1|CI426596 CI426596 Oryza sativa (japonica cultivar-group) leaf of seedling 10mM H2O2 (10min), 24hr afte TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): CAGAATGATTTTTTAAATAAATACTTCCTCCGCTTTGTATTATAAGACTTTCTAGCATTGCCCACATTCATATATATGTTAATGAATCTAGACATATATGTGCCTAAATTATCTACCATCTATATAAATGTAGGCAATGATAGAAAGTCTTATAACCTGAAATAGAGGTAGTAATAACATATGACGAATANATCAATACCTACGACAATATAATATGATCTACGAGAATACATCAATACACTACAAATATATATCAAAAAGCAAATATGAGAATACAATCTCGCCGCCCCACACTGTCATTCCTATGTATACATGTACAACCCAGAACTCCACAAAGTAGGGGAAGAATAGGCATCTACATTANGGTAAGCCGGTTCACCAAATCTCTTCTCCTCTTGTGACA | |||||||||
gi|29635088|gb|CB640097.1|CB640097 OSJNEa13D23.f OSJNEa Oryza sativa Japonica Group cDNA clone OSJNEa13D23 5', mRNA sequence TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): CGTTCGTTTTGTGCATCCATCCAGAATTCGTTCCAGATCCAGCCAGCCAGCCATCTCAAGCTTCTCTCTTCTCTTGTTATTAAGAGCAAGCAAACAGTAGTCTAGCGAAGCGAGACTGCGAGAGCAGAGCATTGTTCTTCTTCTCTAGCTATTAGTGGTGGGGAATAATGGCTCCCGCCACCACCGCAGCAATGGCCCTCGCGCCGCCTCCTTCCCATCACCATCACCATCACCATGTCAAGCAGCTGCAGCTCCCTCCGTCTGTCTCCGTCTCCGTGCCCCTCCGCTCCGGTTTCCTTGGCCGCGCTGCCTGCTGCTGCCCACCCACAGCCGCTGCTCGCCGCCGAGAGCCGCCGCAGCAGCGCCGTGTCCGTGCGGATGTCGTGGGACGGGCCCCTCTCCTCGGTCCGCCTCATTATGCAGGGCCGCAACGTCAAGGTTCTCCTCTCCTACTGCTACCACTAGTTTGCTTCCCTGGAATTTCCTTCGTTTCATATTATAAGGTGTTCTAGCATTACTCATATTCACATATATATATATATGATAATATTCTAGATTCATTATCATATATATGATTATAGGTGATGCTAGAAAATCTTATAACCTG | |||||||||
gi|66913847|gb|CX100695.1|CX100695 RECm1598 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): CCATCTCAATATATAAGAGATTTCGAAGTAATACGATATATCCTCTGTTTCATATTATAAGATTTTCTAGCATTATCCACGTTCTCATATATATATATATATGAATGAATGTGGTTAATATGTTAGAAAGTCTTATAACCTGAAACGGAGGGAGCAGTATTATAAATCTGGACAAATTTTCTTTCTAGATTCGTAATACTAATATGTATCATATTCTTCTAAAATCTCTTATATTATGTAACGGAGGGGTACTGCGTGTCATTTTTCCTTGCTGCTTGCCTGCATGGTACTAGTAGGCTGGTAATTGTACTTGGCAACCAGTATCGTCACGTAGACTTTGTCAGGTATACTGTTGCACGGTTGCAGTGTTGCGAAGTTGCAACAGTGGAGATGTGTGGCACTGGTGCACTTTTTGTCCACCAGTACTTCAGTAGTTTCAGTATTGGCTCTACTGCAAAAA | |||||||||
gi|86498683|gb|CI141316.1|CI141316 CI141316 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): TATCTCAAACACATCTTAAAATATATGCCCACGCGAATGCGCGGACTACCTTCCTAGTTCATATGAACGTGGGTATGCTAGAAAGTCTTATAACCTGAAACGGAGTGAGTATAAAATACTACCATGATGCACGATATGGTATACTCTATAACAAGCCATAAACAAACGCGAGAAGAAGATCAAGGTTAATGGATCCGAGAATGAGCCGTCGCAACTTGCAAGAACCGGAGCACGGCGGCGCGGAGGAAGAAGACCGTCTTGTTGCTGCCGGCGACGGCGAGGCCTACGTGGCTACGTGGGTGGTCGACGACATCTCCGACAAAGTCCTCGAGCTCGTCCTGCTGCGCCTCCACTCCGATCCGCCGCCTGCCTCATCCGCGCCGCGTCCGTCTGCAAGCGCTAGCGCCGCGTCGTCGTCGTTGATGCCGCCGACGGTGCAGTGTCTTCCTCCGCCGCTTCCGTGTCCACCACGGGCCCGACCTCGTCGGCCAATACCACGCCGTTGGCGGCGCGGTCTCCCATGCGGCGTTCGTCCACGTCTCCAGGCCGGTTCTCGTCTACGGCTGCCGCCTCTCACTCGACTTCGTCCCGGACACCGCCTCCTGGACGATCGCCGAGACTCCGACAGCCGCTGCTGCCCTGATGGCCTCATCGTCTGCGAGCCACTTACGCGGCGCTACCAGATGGTCGCCGTCCCCAC | |||||||||
gi|87028009|gb|CI276365.1|CI276365 CI276365 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): GTTTTTGAAGCATGAGAGGTGTCTACAGTTAATATTCCATCCTTATACTGTAAATATCTCAAACACATCTTAAAATATATGCCCACGCGAATGCGCGGACTACCTTCCTAGTTCATATGAACGTGGGGAATGCTAGAAAGGCTTATAACCTGAAACGGAGTGAGTATAAAATACTACCATGATGCACGATATGGTATACTCTATAACAAGCCATAAACAAACGCGAGAAGAAGATCAAGGTTAATGGATCCGAGAATGAGCCGTCGCAACTTGCAAGAACCGGAGCACGGCGGCGCGGAGGAAGAAGACCGTCTTGTTGCTGCCGGCGACGGCGAGGCCTACGTGGCTACGTGGGTGGTCGACGACATCTCCGACAAAGTCCTCGAGCTCGTCCTGCTGCGCCTCCACTCCGATCCGCCGCCTGCCTCATCCGCGCCGCGTCCGTCTGCAAGCGCTAGCGCCGCGTCGTCGTCGTTGATGCCGCCGACGGTGCAGTGTCTTCCTCCGCCGCTTCCGTGTCCACCACGGGCCCGACCTCGTCGGCCAATACCACGCCGTTGGCGGCGCGGTCTCCCATGCGGCGTTCGTCCACGTCTCCAG | |||||||||
gi|88211549|gb|CI211189.1|CI211189 CI211189 Oryza sativa (japonica cultivar-group) same as Lib 33(supermix) Oryza sativa Japonic TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): TGGACATGCTAGAAAGTCTTATAACCTAAAACGGAGGAAGCAGCATATAGAACACACAATCTAATAGGATATATGTCCTGATGTACAAAACATTGTTGCCCTAATTCAAGAAAAACACTTTGATTATCATAGGATACATGTGGTTTCAACTTTGAATTCATCTCCTCAACTCACTCCATCAGGGCCACACTCTGGCAATGCCGCCGAGAAATTCAAGAATCCGATCGTGTCATCTTCCAGCTCAAGATCTCGCCGCGGTGGGCTTGGCCGCGGCGGACTCAATGTCCTCGTCGTCGGCGTCGGCGTCGGCGGCGTCGGCGTGCATCTCGAGCAGCTCCTTGATGGGGATCATGCTCTGGCCGTCGGTGATGGCGATGGCGATGTCGTTGGGGAAGAGCTTGTGGAGCACGAAGGCGTGGATCATGGTGGTGGCGAAGAGGGCGGTGACGACAAGCGTGGCGACGGCGGAGAGCGCGACGCAGAGCGCCCTGGTGAGCGCGTTGTCCACCTCGGTGGAGTAGCGGATGGAGGCGATGGCGGCGCCGGTCATGGGGAACGTGTACGCCCACCACGCCAGCG | |||||||||
gi|88269744|gb|CI381042.1|CI381042 CI381042 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): ATCAAATCAATAATTAAATATATTTTCATAATAAATTTGTCCTGGCTTGAAAATGTTATATTTTTTTCTACAAATTTGTCCTGACTTTGACCAAAAATCAAAACGTCTTATAACCTGAAACAAAGGGAGTATATAATTTCTTAGTCTACAGCACTCAGCAGATGGCAGCAAAAGTGTGTTCCTCGTCTAAATGATTGGCATTGAGTTGCTTCACCAGCGTCTACAGTAGATTTTGACAGAATGAACTGCACTCGAGAAGAAATCAACCAATATCAGCATTGGCTAGGATTGTCTACAAAAACCATCTTCTGGCTCTGGCGAACACAACCATGTGCATCAGTTTGGTCATGTTGTCGTCTTTGTTTGATGGTGATGGATCATCCCGTTCAATAATTA | |||||||||
gi|88225312|gb|CI225228.1|CI225228 CI225228 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): TTGGAAAAAGGTGAATTTGTATTATATGTTATGATAAAAAGAACACTTTTACAATGCTCCTGATATCAATCAGTCCCACTTAGATCCCAACAAGAGGGAAACAAGAAAATGTACACACGCACTGACTACTCTTGACCAGTACGTAAAACAATCACAGTAATAACTACTTTATCTGTTTTATATCATAAAACTTTCTAGCATTGTCTACATTTATATAGATATTAATGAATCTAGATATATGTGCATAGATTCATTAACATCTATATAAATATGAACAATGCTATAAAATTTTATAATCTGAAACGGAGGTAGTAATAAACAGTGGTAGCAGCAGCTAGCTAGCTAGGCTAAAAGCTTAAAATTAAGCTAGTAGCAAGCAGCTGCTGGAGGTGTCAGCGGATGCACTTGCCCGGCGTGGTCCATCCGAAGCCTCCCCGGCGCCTCGCCGCCGGCGGTGCCGCCGTGTAGTTCCTCCAGTCGCGGAGGACGGCGGCGAGGTCGTGCACCTTGTTGGCGAGGCCGGTGCAGCAGTTGGCGTGGAGCGTGCAGA | |||||||||
gi|33666560|gb|CF297527.1|CF297527 30DGS--08-H04.g1 Rice leaf plasmid cDNA library I (30DGS) Oryza sativa Japonica Group cDNA cl TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTAAGGTTCCAGCTTGTCTGCATAAGTAATGAACTGACAAATCACATAGATGATAGATACTTCCTCCGTTTCATATTATAAGACTTTTTAGCATTGTCCATATTAATGAATCTAAACATATATATGTACTTAGATTCATTAACATCTATATGAATGTGAGCAATATTAGAAAGTCTTATATCCTGAAACGGAGAACGGAGGTAGTATATAGCTACAGATAGGTACAGTAGACAGTCGAATTAACCTAATAGACCACTAAACTATATGCTCAATTGGAGACAAGATCAAATCCGACGGGGATAAGATCGGCGATATGGCAGGGGAGCAGGAAGACGCCCTCGGCCCTGCACACGGCGACCCTGAAGCGAGGCNGGTTGTCGACGACGGCGTAGCCCTTGCAATGGCGGACGCGCCGTATGGTCGCCTGGCACGCGGCGAGCTTGTCCTGGTGCCTCCTGTTGTCCCTGTCCAGGTCGAGCACGCACCTCCTGAGCGCCTTGTCCGCCTCCGACGGGTTC | |||||||||
gi|86852544|gb|CI320469.1|CI320469 CI320469 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): AATAAATTTGTCCTGGCTTGAAAATGTTACTATTTTTTTCTACAAATTTGTCCTGACTTTGACCAAAAATCAAAAGGTTTTATAACCTGAAACAAAGGGAGTATATAATTTCTTAGTCTACAGGACTCAGCACATGGCAGCAAAAGTGTGTTCCTCGTTTAAATCATTGCCATTCAGTTGCTTCAAAAGCGTCTAAAGTAGATTTTGACAGAATGAACTGCACTCGAGAAGAATTCACCCAATTTCAGCCTGGCTAGGATGGTCTAGAAACCACCATCTTCTGGCTCTGGCGAAGACACACCATGTGGCTCAGTTTGGTCATCTTGTTCGTTTTTGTTTGATGGTGATGGATCATCCCCTTCACTCAAGTTTCCCT | |||||||||
gi|86822388|gb|CI357948.1|CI357948 CI357948 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): AATCCACATAAATGTTACTTCCTCCGTTTCATATTATAAGATTTTCTAGCATTGCCCACATTCATATATATGTAAATGAATCTAGACAGCATTTATATGAATGTGGGTAATGCTAGAAAGTCTTATAACATGAAAGGGAGGTAGTATCTCATATTATCTATCTCAAAACCAAGTGTATTTAATACAGCATTGAGAATATCTAGAGGAGGTATCAAACTCTCTCACGGGCCAGGGCAAAAAAATGTTCTACACCTCACACTACAACCTTATATTAACTATTAGCAACCCAGCAAAGGACTACATTTCCACTTCTGAAAAAAACTCTGAAAAAAGGAAGATGCGGATGGATTGTACAAGCTATTATAAGTGGGAATCATTTTGATTGTTGAAAGACTAGTGGCTAACAAGAAAATGACAACATGGAGATTTCCTACTTCAGGAA | |||||||||
gi|117238903|gb|CT842589.1|CT842589 CT842589 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): TTTGGAAGCAAAAGACAATTCTAGACCTAGGCAGATACTTCCTCCGGTCATTCAGACAAGATTTGGTCAAACTTTTAAAATTAGACACTAACAATTTGGAATACTATCTATAACTCGTTTCGTTTCAGTCTATAAGGTTTTAACTTTGGTGAAAGTCAAACTGTTTTAAGTTTGACCAAGTTTATAGACGAATATAGTAATATTTATATTACCAAAATAATTTTATTAAATTAATAATTAAATATATTTTAATAATAAATTTATCATGAGTAAAAAATATTACTATTTTTTCTATAAACTTAATCAAACTTGAAGCAGTTTGACTTTGACCAAAGTTAAAACATCTTATAACCTGAAACGGAGGGAGTAATAGTTTTGTCACCTTGCGAGGATGACAAGCCTGTCAAGAAGCATCTGGATCCTGAAAGATGGCTGGTGAATCGTCATGAGCACAATGCTCCCTCCTCTGGCGATGTCCTTCACCTTCTCCACCACGCTGTGCGCGCTGGTGGAGTCGAGACCGGAGGTCGGCTCGTCGAGGAAGAGGAGGGAAGGTTTGTGGATGATGTCTATGCCGATCGACACCCTCCGGCGTTCCCCACCGGAGACTCCTCGGGTCCCTTCATCCCCAATGTACGTGTGAGCCCGTTGTCTGCATTTTGGCACACAGATTGTCAATAAAAATGAGCAAGCTGCTAACCTAGCTTGTAGAGTATAACAGCTACAATTCTGTCGATATTATTTGGTAAATGGTCAGATTAGAGAGATTTTTACGTTCTAAGGATACCGTATTTTTTAATGTAAAATTTGGTATCTCTCGGTATTAATTTGAACTGGGTACATTCCTCAGCAAAAAAAAAAAAAAAAAAAAGGCCAGCTTGGCCTCCAGGGGGGGGCCCGGAACCCAAATTCCCCCCAAAAGGGAGTCGGAATTACCCCGCCGCCCCCTGGGCGGCCTGTTTTAAACAGGCGGGGGCGGGGGAAAACCCCGGCGGGTTCCCCAATTAAATACCCCTTGGAGGCACACCCCCCCTTTTCCCCCCGGGGGGGGAAAAAGAGAAAAAGACGCCCCGCCCCCTTCGCCCTTCCCCCCCACCCTTTTCCCCCCCCCCCTAGGGGGGGGAGAAGGGGGAGCGCCCCCGCGCTCGCGGCGCCCCTATATAAACCGCGCGGGGGGAGGGGTGGGGGTGTGTGGGGAGGAGCGGGAGGAAGCACAAAACTCCTTTACCAACCCCGCCAACCCGGCGCCCCCCCGCCCCCTCCTCTCTCCTCTTTTCTTCTCTTTTCCCTCTTTCTTTTCTTCTCTCTCCTCTTGCTCCCCGGCGCGTGTCTTCTCCACTGCC | |||||||||
gi|117213030|gb|CT844592.1|CT844592 CT844592 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TCAGGTTATAAGACTTT-CTAG EST sequence (targeted fragment marked with yellow): AAACGATAGTTCGAGTTCGATCGAGCAGCTGATGAGGCGATCGAGAGAGCACGTACGTACCGTAGTCTTTTCTCCACTTCTCGTAGAAGGGCAGCACGGCGGGGCGGTAGTCGTGCACGATGCCGGCGCCGCTGCCGCCATCGCCGCTGTCGCGTGCTCGCCGTCGGCGTCGCGCCTCCGCCAGCTGATGCCTGGCGGCCGCGACGGCCTCCCGCATGTCGGCGAGGTTGCCGTAGGGGAAGGAAGGGCGCGGCCCGCCGATGCCCTGCCTCCTGAACTCGGCGAGCACCCGCCGCGGCGCCACCCACACGACGCGGTACAGGTACGCCGCGAGGCAGCACGCCCCCACGCACCACAGGCTCACCAACACCTTCGCCGCCACCACCACCACCATGCCCACCTCCATCTCTCTCTCACTCACTACGACTCTCTCTACGACGTTAATTAACTAAGCTTCTCCTCCTAGTGTTTGTGTTTGTGTGTGTGCAGAGAGAATGTGAGTGTGTGTGTGGGCGCGCGCGCGCGTGTTTCAGCTGGTCGTCAGTGTTGTGCGTGTATGTATAGACGGTGTCCGGCCGGGGAGGAGAGGGGCCGGGGTTGCGAGAGCTAGAGTCCAAATGGTGACTTTGGCGCAAAAAAAAAGATACTGAAAAAAAAGGAGGGAAGTTGCACTCACACATGTTGTACATGTATGTAGGCTACTTCCTCCGTTTTATATTATAAGATTTTTTAGCATGGTTCAAATTCATATATATATGTAATGAATCTAGACATATACGTGTACATAGATTTATTAATATCTATATGAATGCGGATAATGCTAGAAAAGTCTTATAATCTGAAAAAAGAGGTACCTATGTTATGTTAAGCTTAGGGGTGGTATTATTACATGGCCTCCCAAAGTGGCATGGTCCTAAAAAAAAAAAAAAAAAAA | |||||||||
gi|29622842|gb|CB627853.1|CB627853 OSIIEb03A23.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb03A23 5', mRNA sequence TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): GTTCGTTTTGTGCATCCATCCAGAATTCGTTCCAGATCCAGCCAGCCAGCCATCTCAAGCTTCTCTCTTCTCTTGTTATTAAGAGCAAGCAAACAGTAGTCTAGCGAAGCGAGACTGCGAGAGCAGAGCATTGTTCTTCTTCTCTAGCTATTAGTGGTGGGGAATAATGGCTCCCGCCACCACCGCAGCAATGGCCCTCGCGCCGCCTCCTTCCCATCACCATCACCATCACCATGTCAAGCAGCTGCAGCTCCCTCCGTCTGTCTCCGTCTCCGTGCCCCTCCGCTCCGGTTTCCTTGGCCGCGCACTGCCTGCTGCTGCCCACCCACAGCCGCTGCTCGCCGCCGAGAGCCGCCGCAGCAGCGCCGTGTCCGTGCGGATGTCGTGGGACGGGCCCCTCTCCTCGGTCCGCCTCATTATGCAGGGCCGCAACGTCAAGGTTCTCCTCTCCTACTGCTACCACTAGTTTGCTTCCCTGGAATTTCCTTCGTTTCATATTATAAGGTTTTCTAGCATTACTCATATTCACATATATATATATATGATAATATTCTAGATTCATTATCATATATATGATTATAGGTAATGCTAGAAAATCTTATAACCTGAAACAGAGGGAGTGTATATAATTCGGTAATGGAACTAGAGTATTTGTTTTATTAATTGGACCTTTATGAAATACTAGTAGAATTCAACGAAACTACATTCTTCTTTATTGGTTATATTAGTAGTAATTTGCTTCACTAGAATTCTATTTTATACTAGAGAGATTAAAAATTATTACAAAACTAACTGTATACCCGTTGCAACGGAATAGTAATATGGACCTATTACTTATTACTAC | |||||||||
gi|88719745|gb|CI743255.1|CI743255 CI743255 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): GTTGGAAAGTCTTATAACCTAAAATAGAGGAAGTAAAAAATTTAGTGCTTATTACTTTAGCCTATAAACAATCACCTTTACTCGAATTACAAATTAATCTACTGACGTGCACTAGAAGCCATTGAAAATTATTCCTCTATTTTTCGTCTTTCCTTTTCTTCTTCTCCCTTCGGCTTTGCTTCGCTTCTTCATGCTAGGTTGCGCCGGTGACTAAGATAGCGTCACGAACCCTGATTTGAGGCTTTAGGCTTTATGGTTTGGCGAGCGGTTAGATCATTAGAGCGTCCCCTTCCTCTCTGCAGTTCTTCTATTTATAGTACTAGTGGGGTTCGGGAGCTTATCTCGAATTTAGATTCGAAATTAGTTTTAACCAACCACAAAAACGGCATGGTTCCAATTTACCCCAAA | |||||||||
gi|86497688|gb|CI140321.1|CI140321 CI140321 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): GGGTAATGCTAAAAGTCTTATAACCTGAAACGGAGTGAGTATAAAATACTACCATGATGCGCGATATGGTATACTCTATAACAAGCCATAAACAAACGCGAGAAGAAGATCAAGGTTAATGGATCCGAGAATGAGCCGTCGCAACTTGCAAGAACCGGAGCACGGCGGCGCGGAGGAAGAAGACCGTCTTGTTGCTGCCGGCGACGGCGAGGCCTACGTGGCTACGTGGGTGGTCGACGACATCTCCGACAAAGTCCTCGAGCTCGTCCTGCTGCGCCTCCACTCCGATCCGGCGCCTGCCTCATCCGCGCCGCGTCCGTCTGCAAGCGCTAGCGCCGCGTCGTCGTCGTTGATGCCGCCGACGGTGCAGTGTCTTCCTCCGCCGCTTCCGTGTCCACCACGGGCCCGACCTCGTCGGCCAATACCACGCCGTTGGCGGCGCGGTCTCCCATGCGGCGTTCGTCCACGTCTCCAGGCCGGTTCTCGTCTACGGCTGCCGCCTCTCACTCGACTTCGTCCCGGACACCGCCTCCTGGACGATCGCCGAGACTCCGACAGGCGCTGCTGCCCTGATGGCCTCATCGTCTGCGAGCCACTTAC | |||||||||
gi|86481347|gb|CI123980.1|CI123980 CI123980 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): GTCCAAAAGCAAATATAGATTCTTCTGTATTACAATGACTAGACAAACTTGTAACCTGAATAATGATCCCCTCCTCATCCATATTAAGCCTTGTTCAGAGGGATTGGAGGGGTTCGAGGATAAATAATTCCACATCTCAATATATGTCAATAAATCCCCTCCAAATCTAACAGCAGAGCTATATCATCACCATTGTCTTCATCATAAAATAGAGTCGTCATTCAGAATCTTTGTAAGATTTGCATTCCTTCCATGATCAAAATATATGAAATCTGACTCTAGCAGGCCTTTATCTTTATCTTTACTAAGACTGCACGAAGCAGAACCAAACACATCAATAGCAGCATTAACATCATAAACTTCAATGGCGTCATCAACATCATCCTCAAAAAGATATCCAGATGGTGGGTGCAAAATTGTACTTGCATTGCCCTCACAAGTGGTGCAAAGACCAAAACATGTGCTATCTTGAACAGGGCAGCAGATGGGCTTCGAGTTTGATTCATTAAATCGACCAGGTTGTGAGTCCCAGAATTGAGCAAAGAAGAGTGTGCGCTTAGGGTTTGGTGTTGTGGTTGCCTCACGATTTAGTTTGAGCACAGTGCCATGGGTGCTTGCCAAGAAGTTAGCATGGTAGCATCTCCAGTAGT | |||||||||
gi|33689322|gb|CF317561.1|CF317561 HD--07-E21.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA library (HD) Oryza sativa J TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): TTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACAGTCAAAGTAACCATAAATAAGGTTCCAGCTTGTCTGCATAAGTAATTAACTGACAAATCACATAGATGATAGATCCTTCCTCCGTTTCATATTATAAAACTTTTTACCATTGTCCTTTTTAATGAATCTAAACATATATTTGTCCTTAAATTCATTAACATCTATATGAATGGGAGCAATATTAAAAAGTCTTATATCCTGAAACGGAAAACGGGGGTAGTATATAGCTACAGATAGGTACAGTAAACAGTCGAATTAACCTAATAGACCACTAAACTATTTGCTCAATTGGAAACAAAATCAAATCCGACGGGGATAAAATCGGCGATTTGGCAGGGGAGCAGGAAAACCCCCTTGGCCCTGCACACGGGGACCCTGAAGTCGAGGCGGGTTGTCAACAACGGCGTAACCCTTGCAATGGCGGACCCCCCGTATGGTCCCCTGG | |||||||||
gi|58673620|gb|CK062306.1|CK062306 57082rsicek_12346.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): CGGGCTGCAGGAATTCGGCACGAGGGCAGTTTGATTTTGATCAAAATTAAAATGTCTTATAACTTGAAACGGAGGGAATAGCAATCAACTGAAACTAAATGGGCAGGGGCGCACACGTTCGGGAGGGTGCAGTGCCAGTTCGTGACGGACGGGCTGTACAACTTCAGCGGGACGGGGAAGCCGGACCCGACGCTGGACGCCGGCTACCGGCGGGCGCTGGCGAAGAGCTGCCCGCGGCGGGGCGGGAACTCGTCGGCGCTGAACGACCTGGACCCGACCACGCCGGACGCCTTCGACAAGAACTACTTCGCCAACATCGAGGTGAACCGCGGCTTCCTCCAGTCCGACCAGGAGCTCCTGTCCACGCCGGGCGCGCCCACGGCGGCGATCGTCAACAGCTTCGCCATCAGCCAGAAGGCCTTCTTCAAGAGCTTCGCCAGGTCCATGGTCAACATGGGGAACATCCAGCCGCTGACGGGCAGCCAGGGGGAGGTCCGGAAGAGCTGCAGATTTGTCAATGGAAGTTAAGGGAGGAGGACCCGTTAGCTCGAAGGACTGAG | |||||||||
gi|44669210|gb|CR282644.1|CR282644 CR282644 Oryza sativa library (Han B) Oryza sativa cDNA clone y689b07p3, mRNA sequence TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTGTATTTTATATATATATATATATAAATTTAGACATATATGTGTGCCTAGATTTATTAATATCTATATGAATGTGGGCAATGTTAGAAAGTCTTGTAACCTGAAATGGAGGTAGTCACACACATTACCCTAAAGAAAAAGAAATAACACACATTCAGGCAAAAAGCAAGCAAGTCTACTAACATAAGCCTTTTCCTTTTTGCTGGCAAGTTTCTGACTGTGGTTTATGATATGTCTGCTTCATCTACCTTACAAAATAAGAAAGGAAAAGAAAAGCAGCATCACTATATGCTAACAAAAGTTTTGGCTGCAAACAACCATGTCCACTGTACACACACAAGCTGTAGAGCAAATGCAGTATTGCTGAATTAACTGAAGATGGCAGAGTAGGGGTGTAGAACATCCCAATTGTGCTTCTTTCCGCAGCAAAGATCATGTAAAAGATGGCGCAATACATAGAGTATCTATTTAGATGCTTCTGCTAGGATGATTACCAGAAAAATGGCCACCAAGTATAGTACCCCCAGATGACTAACAGGGAAACACTCCATGGAGGGCCCAACACGCCAGGGGCAAGGAGGGCCCGACAAGCAGACGACCACAGATACCCAAACCCAAGAACCAAGCGCCACAACGAGAGGACACCCGAAACCGGCC | |||||||||
gi|86484280|gb|CI126913.1|CI126913 CI126913 Oryza sativa (japonica cultivar-group) Panicles more than 5cm stage and Panicles one TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): TTTTTATAACTATACTATTTTTTCATCATGCATTGCACAGCTGATACAATTATGTTCATAGCAAAAGGGGGGAACAAGGTGAATTTGTATTATATGTTATGATAAAAAGAACACTTTTACAATGCTCCTGATATCAATCAGTCCCACTTAAATCCCAACAAGAGGGAAACAAGAAAATGTACACACGCACTGACTACTCTTGACCAGTACGTAAAACAATCACAGTAATAACTACTTTATCTGTTTTATATCATAAAACTTTCTAGCATTGTCTACATTTATATAGATTTTAATGAATCTAGATATATGTGCATAGATTCATTAACATCTATATTAATATGAACAATGCTATAAAATTTTATAATCTGAAACGGAGGTAGTAATAAACAGTGGTAGCAGCAGCTAGCTAGCTAGGCTAAAAGCTTAAAATTAAGCTAGTAGCAAGCAGCTGCTGGAGGTGTC | |||||||||
gi|88519989|gb|CI447631.1|CI447631 CI447631 Oryza sativa (japonica cultivar-group) 11 days after transferring callus Oryza sativ TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): GGAGCATGAGAGGTGTTCTACAGTTAATATTCCATCCTTATAACTGTAAATATCTCAAACACATCTTAAAATATATGCCCACGCGAATGCGCGGACTACCTTCCTAGTTCATATGAACGTGGGTAATGCTAGAAAGTCTTATAACCTGAAANGGAGTGAGTATAAAATACTACCATGATGCACGATATGGTATACTCTATAACAAGCCATAAACAAACGCGAGAAGAAGATCAAGGTTAATGGATCCGAGAATGAGCCGTCGCAACTTGCAAGAACCGGAGCACGGCGGCGCGGAGGAAGAAGACCGTCTTGTTGCTGCCGGCGACGGCGAGGCCTACGTGGNTACGTGGGTGGTCGACGAAATCTCCGANAAAGTCCTCGAGCTCGTCCTGCCGCGCCTCCACTCCGATCCGACGCCTG | |||||||||
gi|88481806|gb|CI419077.1|CI419077 CI419077 Oryza sativa (japonica cultivar-group) 4th leaf leaf 1mM ACC(1-aminocyclopropane-1-c TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): GGCTTAAGTTTGTTTATTTAACCATATAAACACAACATACATACCCAATCAATCACCATAGGCTTCAACTTCATGTGGCCCGACAAGTTTTGTTCCATTTGTGACAGGACACAGGTTCCATTTTAGCCTTGTAACTTTGTCACCCACTCTATCACCATCATTCATCAAACTTTGAATGGATAAACTACTGGTCTGATTTGAGATTTGTACGTAGTACTAAAATACTTTATCTGTTTTATATTATAAGATTTTCTAGCATTGTCTACATTCATATATAGGTGCCTAGATTCATTAACATCTATATGAATGTGGACAATATTAAAAAGTTTTATAACCTAAAACGGAGGTAGTATATTTCATTCATCTAAAATCATTTATATTTTGAGGTGGACGAAGCAATTCTAAATCACCCCCAGTTGGATC | |||||||||
gi|88221144|gb|CI221100.1|CI221100 CI221100 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): GAACAATGTTAGGAAGTTTTATAACTTGAAACGGAGGTGGTACATATTTAAACATTTATGTTCTTGATTTTGTTTTGCAACTCAAAACAATTTGAATTCCAATATGTACACACTACGTTGTCACCGAAACCTACGCCACGTCAGAGTGCGCCGCGCGCCGGAGGGGACGCCGGCCGGCCGCAGCGCACGGCACGGTCACCGGAGCGTCAGCGTCGAGAGGACCCCGACGAACGCCGCCGCGGCGACGCCGGAGCAGAAGAAGTCGACGGCGCCGTCTCGCCTCGCCTTCTTCACCTTCCTCGCCGCCCTCCCCCTCGCGAGCGCCTCGTACCGCCGCCACGCCGCCGCCTCCGCACCGCGGCCGTGCCTCGCGCCCTCCATGGCCGCCGCCACCGCGGCCAGCACGCCCCGCCCGCTGACGCCGCCGCCATCGCCGTCCTCCGCGCGCAGGCTCACCTCCCGGACGTGGCCGTGCCGGTCGTCGCATGTCACCGCCGCGTCGAGCGCGACGACGCCGCCGCCGAGCACCACGGTGAACCGCGCCACGGTCTCCCCG | |||||||||
gi|29668742|gb|CB665017.1|CB665017 OSJNEd11B14.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd11B14 3', mRNA sequence TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): TGTTTTGTGATTTATTGGTTTGCAGCTCTGATGTACAGATGAGTAGCAGATGACTCGCCGTCTCTCCATCGCATATCAAGAATGCCTATTGCCTGTGATGCCTTCTATGTTTCGGTTCTGAGCAGCAGTAAGCCCATTTTTATCTGTTTTAATGCTATGTGTGTTCCTAATTTTTCTCTTCTATTTCATTAATTAATTAGTTTATCCATTGTGGGTTCTAAATAAAAAATATGTTAATTCCCTCTTGACTGACGCCATGAATCAGTGACCAGCGTTTATCTTGCAAACCCAGTTAAGTTTGCTTATCCTGAACATTTTTCTGATAGTACGTTGGTGAGCTAATCAGTTGGTCCTCTTTGTGTAGGTTGACCAAATAAGGAGGCAAGATTCTAAGGATTCAAACTCATTGCGTTTAGTTAAGCAACACACCAAGGTACACTGTGCCATAATTCTGCAGATTGAGCAGTCACGAATTGAGCATATGCTGATCGCTGTACGGATCATGGTACTTCCTCTATTTCATATTATAAGACTTTCTAGCATTGCCCCCATTCATATATATGTTAATAAATTTAGCCATATATATGTCCCTAGATTCATTAACATTTATATGAATGTGGCCAATGTTAGAAAGTCTTATACCCTGAAATGGAGGTAGTATAAAATAATGTGTAAACAACGCATGCCAATGGCGCCTACAGCCTAACTTGTGTTACTGTCATGTTCAGCAATAATCTATTAATCATGCGTTTCATATC | |||||||||
gi|88720869|gb|CI744168.1|CI744168 CI744168 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): AACAATGTGTTCAAATCCCAACATCTAACTATTTCAAGTGACTGGCTTTATATCTAAATAAAATGCAAAGTGATCTCCACCAGCAAGGAATCATCAGAAATCAACCACTCTCAACTCAGGTGAACAACTGACACAAAACACTTAGGTAGTTGGAAGACCATAACATCAAGAACTCTCCTTGAAAATTTTATAATTTGATCCGCAACGATTCAGATGCAGATGAAACACTGCTGATTCCCACTCAGATTACACACAATACAAATACACCGACAAACTGCCTCAAAAACCACCAAATTGATTCAAAAGTAAAACGGGTATGAGGGATCTTCCCACCGAGACTGACTAAACCTAA | |||||||||
gi|29668084|gb|CB664359.1|CB664359 OSJNEd10A12.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd10A12 3', mRNA sequence TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): ACGGCGGACGCGGACGAGGGCGGCTGCGTCGGTCCCGGTGAACGCGGACGAGGGCGGCAGCGGCGGAGGTCGTGGACGAGGACGGCGGCGGTTGGCAGAGGGAGGCGGCAGTGGTCGAGGGCGCGGTGGACGCGGACGAGGTCGGCGGCGGTGACGGACGAGGGCGGTGGCAGCGGTTGAGGACGACGGCGGACGCGGACACGGACGAAGGCAGCAGCGTCGGTCACGGTGAACACAGACGAGGGCGGCAAGCCGGCAACGGCGGCGATCGTGGCATATGATGTGATAAAATGTTTTGTGATTTATTGGTTTGCAGCTCTGATGTACAGATGAGTAGCAGATGACTCGCCGTCTCTCCATCGCATATCAAGAATGCCTATTGCCTGTGATGCCTTCTATGTTTCGGTTCTGAGCAGCAGTTGAACAAATAAGGAGGCAAGATTCTAAGGATTCAAACTCATTGCGTTTAGTTAAGCAACACAACAAGGTACACTGTGCCATAATTTTGCAGATTGAGCAGTCACGAATTGAGCATATGCTGATCGCTGTACGGATCATGCTACTTCCTCTATTTCATATTATAAGACTTTCTAGCATTGCCCACATTCATATATATGTTAATAAATCTAGACATATATATGTACCTAGATTCATTAACATCTATATGAATGTGGACAATGTTAGAAAGTCTTATAACCTGAAATGGAGGTAGTATAAAATAATGTGTAAACAACGCATGCCAATGGCGCCTACAGCCTAACTTGTGTTAAGGTCATGTTCAGCAATAATCTATTAATCATGCGTTTCAAAAAG | |||||||||
gi|88224389|gb|CI224238.1|CI224238 CI224238 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): GGAATATTCATCCAATCGACCATCTTCATAAAGCATTCAGGAGTACCAGAAAGTTCACAAATACATACATTCAGTTTCTCATATATAGGTGATACCATCATACTTAAGATAAAAACAAGGATCAATGACGATATACACAACCAGATATGTACCAAAAGATACTTCCTCCATTTCATATCATAAGACTTTCTAGCATTACCCATATTCATATATGAATCTAAACATATATGTGCCTAGATTCATTAGCATCTATATGAATGTGGACAATGCTATAAAGTCTTATAGCCTGAAATTGAAATGGAGGTAGTAATAGCTAAGCTACTTCAAACCGCAATCAACTAATTAACTGATCACCACATTACTCGCAGTACACTACAGTAGTAGGAACTGATCATCACATTACTAGTAGTAGACTGATAGAAGAAATAAGATATGATTCAACCAAATTAAGGTGATCGACTGTAGTTACCACGCATAGTTCATCAGAGTAGTATAGTCATCATCTAACAGATCGATCAGCATAAC | |||||||||
gi|88725119|gb|CI748378.1|CI748378 CI748378 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): AATTTTAAATTGACTTCTACTAGTTACTTCCTCTGTTTCAGGTTATAAGACTTTCTAGCATTGCCCACATTCATATGCTAGAAAGTCTTATAACCTGAAATGGTGGTAGTATATAATAAAATAATAAATTTTAAAATAGTAAATTTGACTGCTACTAATATATTACTCCCTCCGTCCCATCATATAGATGATTTTGGAGGGATATGACATATTCTAGATTACATCCGACAAACAGCCATGCCATTAGATAGATCCGCTCTGAGTTATAGGATGAGATCTGCTTGGTCTTGTTAAGGCGATTGAGAGGAAGAAGAGGGAATTTTTGCGAAAAAAAGAATGAATCTCTTTATTTATAGGGA | |||||||||
gi|88259544|gb|CI363837.1|CI363837 CI363837 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): GCAACCAACAGCTTCTACTTATATATATAAATAAATAAATAGAGAGATTACGAATTCAAGAATCAAGCTGCACCTAAACACATTAGGGGAACTCTACCGCTAATCCAGAATATGCTAATCTATCCTGGTTAAGGACGATGTCGTAATGTGGTTACAAGGGCCATAATGCCATGCGAAGTGACATCCACAATGCCTCTTCCATTGAGATTTAATTTGTTTGTCGCAGTAGCGTAAGTAGTACTTCCTCCGTTTCATATTATAAGACTTTTTAGCATTGCCCATATTTATATATATGTTAATGAATATATATATATATATATATGTGTGCGCGCGCGCGCGCCTAGATTCATTAACATCTATATGAATGTGGGCAATGCTAGAAAGTTTTATAAACTGAAACGGAGGTAGTAGATTATAAGATAGGGTCACATTTCATTAGG | |||||||||
gi|88243520|gb|CI243917.1|CI243917 CI243917 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat TCAGGTTATAAGACTTTC-TAG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAATTATATGCCCACGCGAAATGCGGCGGACTACCTTCCTANGTTCATATGACACGTGGGTAATGCTACGAAAGTCTTATAACCTGGAAACGGAGTGAGTATAAAATACTACCATGATGCACGATATGGTATACTCTATAACAAGCCATAAACAAACGCGAGAAGAAGATCAAGGTTAATGGATCCGAGAATGAGCCGTCGCAACTTGCAAGAACCGGAGCACGGCGGCGCGGAGGAAGAAGACCGTCTTGTTGCTGCCGGCGACGGCGAGGCCTACGTGGCTACGTGGGTGGTCGACGACATCTCCGACAAAGTCCTCGAGCTCGTCCTGCTGCGCCTCCACTCCGATCCGCCGCCTGCCTCATCCGCGCCGCGTCCGTCTGCAAGCGCTAGCGCCGCGTCGTCGTCGTTGATGCCGCCGACGGTGCAGTGTCTTCCTCCGCCGCTTCCGTGTCCACCACGGGCCCGACCTCGTCGGCCAATACCACGCCGTTGGCGGCGCGGTCTCCCATGCGGCGTTCGTCCACGTCTCCAGGCCGGTTCTCGTC | |||||||||
gi|88482397|gb|CI419668.1|CI419668 CI419668 Oryza sativa (japonica cultivar-group) 11 days after transferring callus Oryza sativ TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): CTGGAGCATGAGAGGTGTTCTACAGTTAATATTCCATCCTTATAACTGTAAATATCTCAAACACATCTTAAAATATATGCCCACGCGAATGCGCGGACTACCTTCCTAGTTCATATGAACGTGGGTAATGCTAGAAAGTCTTATAACCTGAAACGGAGTGAGTATAAAATACTNACATGATGCACGATATGGTATACTCTATAACAAGCCATAAACAAAGGCGAGAAGAAGATCAAGGTTAATGGATCCGAGAATGAGCCGTCGCAACTTGCAAGAACCGGACCACGGCGGCGCGGAGGAATAACACCGTCTCGTTGCTGCCGGCGAAGGCGAGGCCTACGTGGCTACGTGGGTGGTCGANGATATCTTCGAAAAAGTCCACGAACTCCTCCTGATGCGCATCCACTC | |||||||||
gi|86500619|gb|CI143252.1|CI143252 CI143252 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTGGGAAAAAGGTGAATTTGTATTATATGTTATGATAAAAAGAACACTTTTACAATGCTCCTGGATATCAATCAGTCCCACTTAGATCCCAACAAGAGGGAAACAAGAAAATGTACACACGCACTGACTACTCTTGACCAGTACGTAAAACAATCACAGTAATAACTACTTTATCTGTTTTATATCATAAAACTTTCTAGCATTGTCTACATTTATATAGATATTAATGAATCTAAATATATGTGCATAGATTCATTAACATCTATATAAATATGAACAATGCTATAAAATTTTATAATCTGGAAACGGAGGTAGTAATAAACAGTGGTAGCAGCAGCTAGCTAGCTAGGCTAAAAGCTTAAAATTAAGCTAGTAGCAAGCAGCTGCTGGAGGTGTCAGCGGATGCACTTGCCCGGCGTGGTCCATCCGAAGC | |||||||||
gi|66923508|gb|CX110356.1|CX110356 EI048B09 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): AGAATGTGCAGAGAAGGAAGTCCATGAGAACACCGGTACCACAGCCGAGCGAGCATAGGGAGGACCTGTTCGAGATCGAGGACCTCCAGCTCGCGATCGGCGGCGGTGGCGGCGGCGGCGACAGCAAGGCCGGGACCAGTGACCCTCCTGAGCAAGCGGCGGTGGCGGTGGCGGCGGCTCAGTTCCCGCGGAGGTCGTCGCTGGGGAGGCCGATCAGGAGGGCCACGGAGAGGGTGGCCTCCTACAAGGAGATGCCTGTCAACATTAAGCTCAGGAGGTCCTAGCCTAACATCCTCTCCTAAGGCCAGAATGTCTTATAGTCTGATAGAGCTGCGTGCTGCAATGATTCTTTGCAGTTTAGTTAGTTAGTGTAGCATGTCATTTTGTTTGTTGGAATGGTTGTTGGATTGAATTCTTGATGTACCATGTGTGTATTCTGAGCTGTGACACATTTATTTACGGTCAAGAGGGGGTGCTTTGTGTGAAA | |||||||||
gi|89177874|gb|CI391053.1|CI391053 CI391053 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): CGTAGTAAAGCACGGCCCCATTGCTAGTTACAGCAAATATACAAATATACAGTGTTGCGACTCATTGTCCAAAAGCAAATATAGATTCTTCTGTTATTACAATGACTAGACAAACTTGTAACCTGAATAATGATCCCCTCCTCATCCATATTAAGCCTTGTTCAGAGGGATTGGAGGGGTTCGAGGATAAATAATTCCACACCTCAATATATGTCAATAAATCCCCTCCAAATCTAACAGCAGAGCTATATCATCACCATTGTCTTCATCATAAAATAGAGTCGTCATTCAGAATCTTTGTAAGATTTGCATTCCTTCCATGATCAAAATATATGAAATCTGACTCTAGCAGGCCTTTATCTTTATCTTTACTAAGACTGCACGAAGCAGAACCAAACACATCAATAGCAGCATTAACATCATAAACTTCAATGGCGTC | |||||||||
gi|86874504|gb|CI316870.1|CI316870 CI316870 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): GCAACCAACAGCTTCACTTATATATATAAATAAATAAATAGAGAGATTACGAATTCAAGAATCAAGCTGCACCTAAACACATTAGGGGAACTCTACCGCTAATCCAGAATATGCTAATCTATCCTGCTTAACGACGATGTCGTAATGTGGTTACAAGGGCCATAATGCCATGCGAAGTGACATCCACAATGCCTCTTCCATTGAGATTTAATTTGTTTGTCGCAGTAGCGTAAGTAGTACTTCCTCCGTTTCATATTATAAGACTTTTTAGCATTGCCCATATTTATATATATGTTAATGAATATATATATATATATATATGTGTGCGCGCGCGCGCGCCTAGATTCATTAACATCTATATGACTGTGGGCATGCTAGAAAGTTTTATAAACTGAAACGGAGGTCGTAGATTATAAGATAGGGTCCCATTTCATTACCCAACAATGGGGTACAGTCTTGGTTACCGGCTCACCCACTCGTCTGGATGCTCTTCCCGACCTATCTATACTTCATAT | |||||||||
gi|58671305|gb|CK059991.1|CK059991 62875rsicek_7479.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): CTGCAGGAATTCGGCACGAGGCTCATGGGGTTAACCGAATAAGGCCTAACTGGTTTATAGTGCCCAACAAGCAAATAGAGGTTTTGCAGCGTGTTCCAATGGGGCAACTGCTCATTTGCCTTTGTACTGTTACAGTCATGTTCAAGAGCAAGTTTTTCCTTTCTACTTCCTCCGTTTCATATAATCATATTATAAGACTTTATAGCATTACCCACATTCATATATGTGTTAATGAATCTAGACATATATGTGTGCGTAGATTCATTAACATCTATATGAATGTGGGCAATGCAAAGTCTTATAACCTGAAACGAACTGAGGTAGTACTTCTTTATGTTGGGACAGTCGTTTCATTATGTTTTCTACAAACGTTCAACAGACAACATTCTCTAGCTCGGTGGCCAAGTTATTTATGGGCAAAAGGTTGAAGAATATGAGGGTAAGGTTAACAGAGATAGCAGCAGAATGAACACACTATGGATTCACTCTAGATACCTACCCTAGGGATCTAGAACGGGAAGAGATCAGCAAGAGGGAAACAACATCAAAGATCAATAAGTCAGCTGTTGTTGGAAGAACAAAGAGGGTGAGTTAGCTGCAACCAGATGGCAACAAGAGTGATGGGAGATGATTTCTTGAATTCGTGATATTAGC | |||||||||
gi|88965162|gb|CI009198.1|CI009198 CI009198 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): TTATCGCGATATAATAAATAAATAATCCCCTAAAAGAGATGATGAAGAAAAGAAGGCCACTCCAACTAGAGCTAAATTTACAACCTCGCAAATACTTCATCCGTTTCATATTATAAGACTTTTTAGCATTACCCACATATATATGCCTAGATTCATTAACATATATATGAATGTGGATAATATTAGAAAGTCTTATAACCTGGAACGGAGGTAGTACGTATCAAAAGTATAGTAGATCGTGTGCTGTAAAATATAAACAAATCCAATCCAAACTAAACGATCACTTTGGTCGGACACGGAAACATGCATGCATTTGGTTGCCTCACGAGATCTCGACGTCGCACGGCACGCTGTTGAAGGACCGCGCCGCCGACGGCGACAAGCCGATGTTCACCGGCGAGCAGGTCACATTGACTTGGTAGTACCTGGAGGCGACGCCGCCGACTATGAACCGGACGCCCGTGGTCACCTCAACGTCCACGCTCAGCTCGCCGGCGGCGAGGTCGTGCTCCAGCTCCCAGGC | |||||||||
gi|29676857|gb|CB673132.1|CB673132 OSJNEe07I10.f OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe07I10 5', mRNA sequence TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): ATTAACATATATATGAATCTTGGCAATGCTAGAAAGTCTTATAACCTAAAACGGAGGTAGTAATATATTTTCAAATATTAATGGTACAAGAGTAAAGGTAGTACTAACCTTATGTTCCAGTGTAAAGCATCATCTGCTGAGGATTTGAGGACTTCCTGTTTTATAAAAAGGGAGAAGACGTTCACATTACTTTTGATTCGATAATTATCAATCCAATGGAATGATGGATCATTCAAAATACTGTAACAGTGTAACTTCATTAGCCTTGATTCAAATTAGTAATCAGTAAATTATCGATTCCGAGTACCAACTAGAGCTAGGCCTCGCAGCCTCGTCGCCGCTCGCCGTTCCCATTGCTCCGCTTGGCAACATCGGCGTTGTGCTGCCTGCTGCCGTGAGGCGTAATGCTGTCGCTGCCGCCTGCTGTGCTGCACACACGCAGCAAGTCGCGTCTCTCCACGAGTGAACACTAAAAAGTAAACAGTTAAGACGGAGCGACATATGTCTTCCGCCTGGGCACCTAGCGTAGCTCCTGATCTAGGGCCAGGCTGCAGGCCTACTCCGAGGCGGGGGCCCCCAAAAATAGGGGGCCTTGTGCGGCCGCCGTGCTCGCACATGGCCTTAGACGGCCCTGACAAAGACATGTTAACTGGGTACATAAATGCACAAACAGTCATGCCGTCAACATCGATACTTGTCGAGTAGGCGGCTAATGCACAAACAGTCCAAGTACTACGGAAAA | |||||||||
gi|58692520|gb|CK081207.1|CK081207 83748rsicen_9306.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indic TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): CCTTCCCATCACCATCACCATCACCATGTCAGCAGCTGAGTCCCTCCGTCTGTCTCCGTCTCCGTGCCCCTCCGTCCGGTTTCCTTGGCCGCGCACTGCCTGCTGCTGCCACCCACAGCCGCTGCTCGCCGCCGAGAGCCGCCGCAGCAGCGCCGTGTCCGTGCGGATGTCGTGGGACGGGCCCCTCTCCTCGGTCCGCCTCATTATGCAGGGCCGCAACGTCAAGGTTCTCCTCTCCTACTGCTACCACTAGTTTGCTTCCCTAGAAAATCTTATAACCTGAAACAGAGGGAGTATATATAATTCGGTAATGGAACTAGAGTATTTGTTTTATTAATTGGACCTTTATGAAATACTAGTAGAATTCAACGAAACTACATTCTTCTTTATTGGTTATATTAGTAGTAATTTGCTTCACTAGAATTCTATTTTATACTAGAGAGATTAAAAATTATTACAAAACTAACTGTATACCCGTTGCAAC | |||||||||
gi|87007255|gb|CI277330.1|CI277330 CI277330 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): ATGCTAGAAAGTCTTATAACCTGAAACGGAGTGAGTATAAAATACTACCATGATGCCACGATGTGGTATACTCTATAACAAGCCATAAACAAACGCGAGAAGAAGATCAAGGTTAATGGATCCGAGAATGAGCCGTCGCAACTTGCAAGAACCGGAGCACGGCGGCGCGGAGGAAGAAGACCGTCTTGTTGCTGCCGGCGACGGCGAGGCCTACGTGGCTACGTGGGTGGTCGACGACATCTCCGACAAAGTCCTCGAGCTCGTCCTGCTGCGCCTCCACTCCGATCCGCCGCCTGCCTCATCCGCGCCGCGTCCGTCTGCAAGCGCTAGCGCCGCGTCGTCGTCGTTGATGCCGCCGACGGTGCAGTGTCTTCCTCCGCCGCTTCCGTGTCCACCACGGGCCCGACCTCGTCGGCCAATACCACGCCGTTGGCGGCGCGGTCTCCCATGCGGCGTTCGTCCACGTCTCCAGGCCGGTTCTCGTCTACGGCTGCCGCCTCTCACTCGACTTCGTCCCGGACACCGCCTCCTGGACGATCGCCGAGACTCCGACAGCCGCTGCTGCCCTGATGGCCTCATCGTCTGCGAGCCACTTACGCG | |||||||||
gi|88696174|gb|CI739749.1|CI739749 CI739749 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): AATTTTAAATTGACTTCTACTAGTTACTTCCTCTGTTTCAGGTTATAAGACTTCCTAGCATTGCCCACATTCATATGCTAGAAAGTCTTATAACCTGAAATGGTGGTAGTATATAATAAAATAATAAATTTCAAAATAGTAAATTTGACTGCTACTAATATATTACTCCCTCCGTCCCATCATATAGATGATTTTGGAGGGATATGACATATTCTACATTACATCCGACAAACAGCCATGCCATTAGATAGATCCGCTCTGACTTATAGGATGAGATCTGCTTGGTCTTGCTTAAGGCGATTGAGAGGAAGAAGAGGGAATTCTTGCGAAAAAAAGAATGAATCTCTTTATCTATAGGGAACA | |||||||||
gi|89194727|gb|CI117164.1|CI117164 CI117164 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTACTAAAATACTTTATCTGTTTTATATTATAAGATTTTCTAGCATGGTCTACATTCATATATAGGTGCCTAGATTCATTAACATCTATATGAATGTGGACAATATTAAAAAGTTTTATAACCTAAAACGGAGGGTAGTATATTTCATTCATCTAAAATCATTTATATTTTGAGGGGGACGAAGCAATTCTAAATCACCCCCAGCTGGATCGATCGATCTGCCTCTTAACCGACACGGGCAGAATCGCATCACGAGGCGCGCTGGCACCGGCACCGGCACGGCCTTGAGCGGCGTGACCATGTTGAGCGACGTGCCGAACCGGCCCCTGACGTCGACGTCGCACGGCCGCATCCCGCCGGGGAGCCGCCACTCGAACGCGTGGAGCAGCGACGCCAACACCA | |||||||||
gi|29673311|gb|CB669586.1|CB669586 OSJNEe02D01.f OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe02D01 5', mRNA sequence TCAGGTTATAAGACTTTCTAG EST sequence (targeted fragment marked with yellow): GTTAAAGTTAATTGCTCTCTATTTCTCAACGTTTAGGCTCAATTTTCTGTAGATAAATTCTTTCATTTATTTATGCTAGCTTACGTTGTTCCAATATATGTCTATTTATCCTTTTCTTTTACAGTCATATCCCATGATTATCTGATCAATGCACTTCGCTTTGTTAAGAATATGATTGCTATTATACTATTTACTACTTCCTTCGTTTCATATTATAAGACTTTCTGGCATTGCCTACATTCATTAACATCTATATGAATATGGGCAATGCTAGAAAGTCTTATAACCTGAAACGGAGGTAGTAGTTAAAGTATATGCCTTAGAAACTAGATTTCTGTAGTCATAGAGTATCATAAGCAGCTGCATCCTGACTCAATTGTATATTCATCTAGGTACTTAAGTACCTCAGTTCTTCTGGATATATTGATAAAGCTTAACTCATAATCGAAGGCAGCCTTATACACTAAATGCCATTTCTCTCTTACCCTGTAGTTCTGCAAGAATATTGTTCTAGCAGGAGTTGGCAGTTTATCCTTGATGGATGATCATTTAGTCACAGAGGATGATCTCAATGCAAATTTCTTAATTCCTCATGATGAGAGCATATATGGTGGTAGATCACGAGCTGAGGTTTGCTGTGAGTCCCTGAAAGATTTCAATCCAATGGTCCGAGTTGCAGTCGAAAAGGGTGAGCCTAGTCTGGTTTTCTTCATTGGTTTGGGTGTCAGAATTAGAAGTACATAAAGTAGGATGCCTTCTTGCATTCTTGAATTGCTCTCGTCCTAATGGTTAATCTTTGAAT | |||||||||