| mature miRNA: TCATGGTCGTGATCGTGATCG species: Fraxinus excelsior database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|306764462|gb|FR637358.1|FR637358 FR637358 WZ0AFEAA Fraxinus excelsior cDNA clone WZ0AFEAA18YM24CM1, mRNA sequence TCATGGTCGTGATCGTGATCG EST sequence (targeted fragment marked with yellow): GGAGGTCAATATTTTTAAGGAGGATGTAGTAATCCAGTTCACTAACCCTAAAGTTCAAGCATCTATTGCTGCCAACACTTGGGTGGTCAGTGGTTCTCCTCAGACCAAGAAATTGCAAGACGTTCTTCCTCAAATCATTCACCAATTAGGTCCAGATAACTTGGAGAATTTGAAGAAATTGGCAGAGCAGTTCAAAAATCAGATGCCTGGTGCAGCTGCTGATGCAGCCGCGGCTCAAGAACAAGATGATGATGATGTACCAGACCTTGTAGATGGCGAGACCTTTGAGGCTGCTGCAGAGGAGGGTCATGTTCATGTTCATGATCATGATCATGCTCATGATCATGGTCATGGTCATGGTCATGGTCATGGTCATGTTCATGATCATGGTCATGGTCATGATCATGATCATGCTTAAGAGCTTGATATTGGTTTTGCGTGCAATTCCTTGTACTTTTTTCTATGTTTTTGAGATGTTTATTATGAAAATACTAGAAAGTGTGTTACATTAACATAGCCCGTCAGATCGTTGTCTGCCATAAATGAATGACCAGGGCAATCTCGTTGGACTTCT | |||||||||
gi|306764462|gb|FR637358.1|FR637358 FR637358 WZ0AFEAA Fraxinus excelsior cDNA clone WZ0AFEAA18YM24CM1, mRNA sequence TCATGGTCGTGATCGTGATCG EST sequence (targeted fragment marked with yellow): GGAGGTCAATATTTTTAAGGAGGATGTAGTAATCCAGTTCACTAACCCTAAAGTTCAAGCATCTATTGCTGCCAACACTTGGGTGGTCAGTGGTTCTCCTCAGACCAAGAAATTGCAAGACGTTCTTCCTCAAATCATTCACCAATTAGGTCCAGATAACTTGGAGAATTTGAAGAAATTGGCAGAGCAGTTCAAAAATCAGATGCCTGGTGCAGCTGCTGATGCAGCCGCGGCTCAAGAACAAGATGATGATGATGTACCAGACCTTGTAGATGGCGAGACCTTTGAGGCTGCTGCAGAGGAGGGTCATGTTCATGTTCATGATCATGATCATGCTCATGATCATGGTCATGGTCATGGTCATGGTCATGGTCATGTTCATGATCATGGTCATGGTCATGATCATGATCATGCTTAAGAGCTTGATATTGGTTTTGCGTGCAATTCCTTGTACTTTTTTCTATGTTTTTGAGATGTTTATTATGAAAATACTAGAAAGTGTGTTACATTAACATAGCCCGTCAGATCGTTGTCTGCCATAAATGAATGACCAGGGCAATCTCGTTGGACTTCT | |||||||||
gi|306664404|gb|FR640657.1|FR640657 FR640657 WZ0AFEAA Fraxinus excelsior cDNA clone WZ0AFEAA32YH03CM1, mRNA sequence TCATGGTCGTGATCGTGATCG EST sequence (targeted fragment marked with yellow): GAGAATTTGAAGAAATTGGCAGAGCAGTTCAAAAATCAGATGCCTGGTGCAGCTGCTGATGCAGCCACGGCTCAAGAACAAGATGATGATGATGTACCAGACCTTGTAGATGGCGAGACCTTTGAGGCTGCTGCAGAGGAGGGTCATGTTCATGTTCATGATCATGATCATGATCATGGTCATGGTCATGGTCATGGTCATGGTCATGGTCATGTTCATGATCATGATCATGGTCATGGTCATGATCATGCTTAAGAGCTTGATATTGATTTTGCGTGCAATTCCTTGTACTTTTTTCTATGTTTTTGAGATGTTTATTATGAAAATACTAGAAAGTGTGTTACATTAACATAGCCCGTCAGATCGTTGTCTGCCATAAATGAATGACCAGGGCAATCCTC | |||||||||
gi|306664404|gb|FR640657.1|FR640657 FR640657 WZ0AFEAA Fraxinus excelsior cDNA clone WZ0AFEAA32YH03CM1, mRNA sequence TCATGGTCGTGATCGTGATCG EST sequence (targeted fragment marked with yellow): GAGAATTTGAAGAAATTGGCAGAGCAGTTCAAAAATCAGATGCCTGGTGCAGCTGCTGATGCAGCCACGGCTCAAGAACAAGATGATGATGATGTACCAGACCTTGTAGATGGCGAGACCTTTGAGGCTGCTGCAGAGGAGGGTCATGTTCATGTTCATGATCATGATCATGATCATGGTCATGGTCATGGTCATGGTCATGGTCATGGTCATGTTCATGATCATGATCATGGTCATGGTCATGATCATGCTTAAGAGCTTGATATTGATTTTGCGTGCAATTCCTTGTACTTTTTTCTATGTTTTTGAGATGTTTATTATGAAAATACTAGAAAGTGTGTTACATTAACATAGCCCGTCAGATCGTTGTCTGCCATAAATGAATGACCAGGGCAATCCTC | |||||||||
gi|306664404|gb|FR640657.1|FR640657 FR640657 WZ0AFEAA Fraxinus excelsior cDNA clone WZ0AFEAA32YH03CM1, mRNA sequence TCATGGTCGTGATCGTGATCG EST sequence (targeted fragment marked with yellow): GAGAATTTGAAGAAATTGGCAGAGCAGTTCAAAAATCAGATGCCTGGTGCAGCTGCTGATGCAGCCACGGCTCAAGAACAAGATGATGATGATGTACCAGACCTTGTAGATGGCGAGACCTTTGAGGCTGCTGCAGAGGAGGGTCATGTTCATGTTCATGATCATGATCATGATCATGGTCATGGTCATGGTCATGGTCATGGTCATGGTCATGTTCATGATCATGATCATGGTCATGGTCATGATCATGCTTAAGAGCTTGATATTGATTTTGCGTGCAATTCCTTGTACTTTTTTCTATGTTTTTGAGATGTTTATTATGAAAATACTAGAAAGTGTGTTACATTAACATAGCCCGTCAGATCGTTGTCTGCCATAAATGAATGACCAGGGCAATCCTC | |||||||||
gi|306664404|gb|FR640657.1|FR640657 FR640657 WZ0AFEAA Fraxinus excelsior cDNA clone WZ0AFEAA32YH03CM1, mRNA sequence TCATGGTCGTGATCGTGATCG EST sequence (targeted fragment marked with yellow): GAGAATTTGAAGAAATTGGCAGAGCAGTTCAAAAATCAGATGCCTGGTGCAGCTGCTGATGCAGCCACGGCTCAAGAACAAGATGATGATGATGTACCAGACCTTGTAGATGGCGAGACCTTTGAGGCTGCTGCAGAGGAGGGTCATGTTCATGTTCATGATCATGATCATGATCATGGTCATGGTCATGGTCATGGTCATGGTCATGGTCATGTTCATGATCATGATCATGGTCATGGTCATGATCATGCTTAAGAGCTTGATATTGATTTTGCGTGCAATTCCTTGTACTTTTTTCTATGTTTTTGAGATGTTTATTATGAAAATACTAGAAAGTGTGTTACATTAACATAGCCCGTCAGATCGTTGTCTGCCATAAATGAATGACCAGGGCAATCCTC | |||||||||
gi|306772218|gb|FR642084.1|FR642084 FR642084 WZ0AFEAA Fraxinus excelsior cDNA clone WZ0AFEAA38YH14CM1, mRNA sequence TCATGGTCGTGATCGTGATCG EST sequence (targeted fragment marked with yellow): GGCTATCCACTCCGTAATCTCTCAACTTCCTCTTTTCTCGATTTGCTTCGCACCGCTTCTTCTCCAAAGCTCGCAGAGATGAATGTGGAAAAGCTAATGAAGATGGCTGGTTCTGTCCGAACTGGGGGGAAGGGTACCATGAGAAGAAAGAAGAAGGCTGTTCATAAGACAACCACAACAGATGACAAAAGACTTCAAAGTACCCTGAAAAGAATAGGGGTGAATGCTATACCAGCAATTGAGGAGGTCAATATTTTTAAGGAGGATGTAGTAATCCAGTTCACTAACCCTAAAGTTCAAGCATCTATTGCTGCCAACACTTGGGTGGTCAGTGGTTCTCCTCAGACCAAGAAATTGCAAGACGTTTTTCCTCAAATCATTCACCAATTAGGTCCAGATAACTTGGAGAATTTGAAGAAATTGGCTGAGCAGTTCAAAAATCAGATGCCTGGTGCAGCTGCTGATGCAGCCACGGCTCAAGAACAAGATGATGATGATGTACCAGACCTTGTAGATGGCGAGACCTTTGAGGCTGCTGCAGAGGAGGGTCATGTTCATGTTCATGATCATGATCATGATCATGGTCATGGTCATG | |||||||||
gi|306764462|gb|FR637358.1|FR637358 FR637358 WZ0AFEAA Fraxinus excelsior cDNA clone WZ0AFEAA18YM24CM1, mRNA sequence TCATGGTCGTGATCGTGATCG EST sequence (targeted fragment marked with yellow): GGAGGTCAATATTTTTAAGGAGGATGTAGTAATCCAGTTCACTAACCCTAAAGTTCAAGCATCTATTGCTGCCAACACTTGGGTGGTCAGTGGTTCTCCTCAGACCAAGAAATTGCAAGACGTTCTTCCTCAAATCATTCACCAATTAGGTCCAGATAACTTGGAGAATTTGAAGAAATTGGCAGAGCAGTTCAAAAATCAGATGCCTGGTGCAGCTGCTGATGCAGCCGCGGCTCAAGAACAAGATGATGATGATGTACCAGACCTTGTAGATGGCGAGACCTTTGAGGCTGCTGCAGAGGAGGGTCATGTTCATGTTCATGATCATGATCATGCTCATGATCATGGTCATGGTCATGGTCATGGTCATGGTCATGTTCATGATCATGGTCATGGTCATGATCATGATCATGCTTAAGAGCTTGATATTGGTTTTGCGTGCAATTCCTTGTACTTTTTTCTATGTTTTTGAGATGTTTATTATGAAAATACTAGAAAGTGTGTTACATTAACATAGCCCGTCAGATCGTTGTCTGCCATAAATGAATGACCAGGGCAATCTCGTTGGACTTCT | |||||||||