| mature miRNA: TCATGTTCATCATCATCCTGT species: Adiantum capillus-veneris database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|67234127|gb|BP920381.1|BP920381 BP920381 Adiantum capillus-veneris prothallium Adiantum capillus-veneris cDNA clone YMU001_00 TCATGTTCATCATCATCCTGT EST sequence (targeted fragment marked with yellow): CAACAGAGAGGTCCTGAAGGGATTGCTTTTGGAGGAGATATTGGCAAGGAAAGGTTATTACTTAATGACGACTTTATGCATGTGATTATACACCACCATTCTCTGGATAAGACATATGAGGCAGGCCCCTTGCTACCAAATCAAGGCTATCACACCATCAGAGGGAAAGTGATAGATGTGGAGGTATGGGGCTTCGGAGGGGCAGCGACCATGGAAAAGCAAGCACAGTTTCAAGGCAGGAAGAATTTGTTTGTGGAGCAGAGACGCAAGGTTGACTTGCAGTCATTCGGCAATTGGTCAGATTCGCCTGAAAAGATGATGATGGATATGGTATCAGATCCAAATAGAGGTCAACGGCAGGGTCGATGACACAGCTATGACGGTTTTAAATGCTTGCAAAGCAATTGGAGGCTGAAAGAAGTTCTGTTCTGACTGCCGCTCCTTGAAATGTGAGCTTTCGTGATTTGGGATTTCTTTGTTTGGATCACTGCTCATCTGGAAGCATGGTGCTCCAGGCAGATATGTCAATAAACGTCAGTATAACATGCTGACATTGTGTGCAAGTACAAATTTGCTCATGG | |||||||||
gi|219838106|gb|DK956608.1|DK956608 DK956608 TST39 Adiantum capillus-veneris cDNA clone TST39A01NGRL0026_C24 5', mRNA sequence TCATGTTCATCATCATCCTGT EST sequence (targeted fragment marked with yellow): CGCCTTCTCAGTGATGACGAACATCAGATGACGAGACTGACTATTTCGTGATGTCAAACGAGGCATTTGTCTGAGAGAAGTAATGTCGCTACTACAGGCAGTCTAAGGTCGCCAGTAGGGGACAGGCGATGGCCAGGTACTTACTATTTCTCTTTCGTTGACGTGTTCCCTTTGCTCGGATGATGATGAACATGCCAAAAGTTATTCTCACGACGGTCGTCCGAGCTTTTTCGGCTATGGAGATTTGGTCTCCTGTCTGACGGGCAGCATTTTTTTGTATGTTTTCCGCTCGATTCAAGCATCAGTGAATCTGCATGTCTGCCATGTGCATACGTAGTTTGCTTGTTTGTTTTCAAGCTGCACGGCCCTTAAGAGCGCCTCTAGTTTGGCTGGCTTCTGTCAGCTGCGTAGTGATGGAGGTTTTCGAGTCATTGCTGTGCTAGATTAAATTCAGGGGAAGAGAAGGGCCTTCCTTTTCATCCTTGTCGTCTCTTCCTTTTGTTGGATCAGCTTCTGTTTGACCTAACAGGGAGGGTGTCTGACATTTTTGTCTGAGGAATCCATGAGTTTTACTTCATCATCTGAGAGGGAGGGTGCTTGACCACCTTGATGTTGAACGGATC | |||||||||
gi|219831826|gb|DK956438.1|DK956438 DK956438 TST39 Adiantum capillus-veneris cDNA clone TST39A01NGRL0025_L21 5', mRNA sequence TCATGTTCATCATCATCCTGT EST sequence (targeted fragment marked with yellow): CAGAACCACACGCCCCGCCCCGCCGAGGAACACACACACACACACACACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCAGGTGTCGTCCACAGAGCAGAGCTTTTGCTGGAGCTACATGGAGTCCCCTGCACAGTCTCTGACGCCTGCAGATGGCGTGGAGGGAGATGATGAATACGATGAGGATGAAGATGATGCACGATCTGAGATTGAAGATGGTGAGGGACAATCCTCTTCAGACGAGGAGGAGCCCCGGCTGAAGTACCAGCGGATGGCAGGTAGCATGCCCTCTTTGCTTTCCAATGATGCTGCATCATGTATCACTGTCTCGGAGCGAATGATTGCGCTAGGAACCCACGATGGCACCGTGCATCTCCTTGATTATCAAGGCAATCAGGTCAAGGAGTTTGCTGCACATACAGCAACTGTGAATGAGCTGAGTTTTGATGCGATTGGTGAGTTCATTGGAAGCTGCTCAGATGATGGATCAGTTGTTGTCAACAGCCTCTACAGCGACGAAAAAGAGAGATTTGATTTCCATCGACCTATGAAGGCTGTAGCTT | |||||||||
gi|219829672|gb|DK962691.1|DK962691 DK962691 TST39 Adiantum capillus-veneris cDNA clone TST39A01NGRL0014_I19 5', mRNA sequence TCATGTTCATCATCATCCTGT EST sequence (targeted fragment marked with yellow): GCACGGGAGGCCTTGATGTATATGTTTACGAACAACCCCTTCACACCGCACAGGGAAAGGGCTTCATGTGGCAATCGTCGACGGATGTTGAAGCCTAGTCTCTAGCCTAACTACTAGCCGGGGCCTTTGCTTCAACAAGTGCCTCATCGCATGGCTTTTGTGGGCGAAAGTCCTTGCTTTTAGAGGGGGAGAGAGACAAAACACATACACACACAGACGGGGCGATGGGCAACTGCCAGGCTGCAGAGATGGCAGGCGCTTTGGTGGAGGTGCCAGGGGGCCGCGTGGAGAGGGTGGTGATGGACATGCAGAGTTCCTTCTCTGCTCAACGTCTCATGTCCGCCTACCCTGGCTACTTCGTGGCCCTCATGTCCAGCTCCTCCATCGTCCACCCCCTGGCCTTGCCTAGTACCCCCTCCAGTACCTCTAACCCCGCTCCTCTGCATTCCTTCAAGCTTCTTGCCTCGGATGCACCTCTTCGCAGCGGCCACCGTTATCGCCTTATCAGCTTTGAAGAAGTGCTTACTTGTTTCTCCCAGCAAGGACCGGGCGCCTATGCGAAGGGCTTCCTGACGGCCGTGAATGCACACAAGCCACTATCGAGCAAGCATCATCACCTTACCAGAGATCAACCCTTGAACAATCATCATGTTGT | |||||||||
gi|219837564|gb|DK960277.1|DK960277 DK960277 TST39 Adiantum capillus-veneris cDNA clone TST39A01NGRL0006_P16 5', mRNA sequence TCATGTTCATCATCATCCTGT EST sequence (targeted fragment marked with yellow): GTATCACTGAAGGAAATAACCACAAGAACCACAATTTTTTTTTGCTTGTTGCGGTCGCACGTAACCAAGATTTCTTGGGCGTGTCAATTTCTACTCTTGTTTTTGAAGAGTGACAGGAAACCCAAGAAAGAAGGGCGCCTTGTGCCTCTTTTCACTCATTGAGAGCGGACCGTGCACTTAGCGGCTGACAAATCTACGTGAGGTGGGAAAAAGCAACCTTGGTGTGAGCGCAAGGCCGCCAAGGGGTGCGCCTGCGGAAAAGAGCCGAAATCGGGTGAAGAGAAAATCCTTCTCTAACACAGATTGTAAGCGAAAGAAGAACCTTAAGAACCTCAAGAACTCAAGAACCCCGAGAACTAACACCCTCAAGAACCTCAAGAACTCAAGACCCAAGATCCACAAGAAACCAAGTTCCTCGTGAACTTAAGAACCAAAGATCTTAGTGGATGGTCATCACCCGAACCGGAATGGATACTTTGCATGAAGGTGATGAGCATGAGGGTGGTGAAGAAGAATTTTCCCCACTAGGAGGTTTTTCCGTCCCTCCCCTTTCCCCATCTACTCCAAGGATTGCACGAACTCCTATGGAGGAGTTGAAGCAATTGTGAAAAGGAAGTTA | |||||||||
gi|219827546|gb|DK962290.1|DK962290 DK962290 TST39 Adiantum capillus-veneris cDNA clone TST39A01NGRL0013_H15 5', mRNA sequence TCATGTTCATCATCATCCTGT EST sequence (targeted fragment marked with yellow): GTCAACTTCTGATCCACCTGCAGGAGAGGCAAGCAGTGTAGCAGCAGCAACGTCAGTGGCGCCTTCTGCTGACCCCCCTTCTTCATCATCCTCCAAGCGGAGATGGAGCCCCTGCACATGGCGTTATGCTATCGAGGAGGTCCAACCAGAGCTCGGATCACGGCCCCGCAACAGCAGCAACAACAACCCTCCCTACTCTTCATCGTCTCTGCGCTCTGCTGGTGCAAACGCAGAACATGCCCCTCCTCATACCACAAGTAAGTCTCGCCCCCTCCACACCCAGGATCATGCATACGGCAAAGAGAGTGACGACCCCTTTCGTCGTAACACTCACAGTAACCGAACATGGGGTGGCGCAGAGCTCTCTGAGCTTCGTGCTCGACATGCGCAACCCCGCTCTCAAGACATGCTGAGCAAGAAGAAGCGCCCACGCCCACCTCATCCGCAGCAGGCATATCAACCGCATCAGCAGAAGAAGCCTGCAAGGAGGCCTAGAGAGCAAGAAGAGGATGAAGATGAAGATGAGGAGTGGGACAATGAGGATGACGATGGTGATGATGCAGAGCTAGGGCACCATTTTGAGGAAAGTAGGAAGAAGAAGAGAGAAATGAGCCCTAGTGAGCTCTATTACTGTGAGGTATGTAG | |||||||||