mature miRNA: TCCAAAGGGACCGCATTGATC species: Cichorium intybus database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|218986078|gb|FL682173.1|FL682173 CIRSL006E07 CiRS Cichorium intybus cDNA 3', mRNA sequence TCCAAAGGGACCGCATTGATC EST sequence (targeted fragment marked with yellow): CCTGCACGAAACTCCCCAACCGCCTCCGCGGTTTTCCCGGTCTGTTTAACCCGACCGAACATTCGAGTACATCCGGGAAATACTCGAAAAACCTCGAAACGCTTCGGTCGCGTTCGCGGGCAGTTTCGGATTTAGGGATGGAGTATGTCATGGGCGGCTGCCCGAAACTGAGGAAGCTTGAGATACGCGACTGCCCGTTTGGAAACGCGGCATTGCTTTCGGGGTTGACTAAGTACGAGTCAATGCGGTCCCTATGGATGTCGGCTTGTAATGTGACTATGAATGGGTGTGAGGTTTTGGCTAAAGAGAGACCGCGGTTGAATGTTGAGGTTATGAAAGATGAAGATGGTGATGGTAGTCAGGCTCATAAGGTTTATGTTTATCGGACCGTGGCGGGCCCACGAAGGGATGCACCGCCTTTCGTTATCACGCTTTGAACCCGGGTGCGCGTTATAAAGACGGGACTTCTTTTTAGTGGTTTGTAGTTGAATAAGATGTGTATATACGTCAGACTATGGTCAGGGGTAAAATGGGTATTCTTTCATGTTTTGTTATGTTTTTTTTTTTTTTGTTGTTGTCGGAAGAGATTAGTATTTTTATGTTGTAGTTGATTGATAATGGATGATGAACATGGTGCATT |