| mature miRNA: TCCACCCATCGTCATCATCTC species: Lactuca serriola database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|22445673|gb|BU011278.1|BU011278 QGJ15M11.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGJ15M11, mRNA sequence TCCACCCATCGTCATCATCTC EST sequence (targeted fragment marked with yellow): ATCTGAGTGAAGACATCAAGAGAAGATTCTACAAAAACTGGTGCAAATCAAAAAAGAAAGCTTTCACAAACTACTCAAAGAAATACGAAACCGAAACAGGAAAGAAAGACATTCACTCACAGCTAGAGAAAATGAAAAAGTACTGCAATGTCATCCGTGTTCTCGCCCACACACAAATTCGTAAGATGAAAGGTCTGAAACAGAAAAAGGCTCACCTAATGGAAGTCCAAGTCAATGGTGGTGACGTGGCACAAAAAGTTGACTTTGCATACGGTTTTTTCGAGAAACAAATTCCAATCGATGCTGTGTTTCAAAAAGATGAAATGATTGATATTATTGGCGTGACAAAAGGGAAAGGGTATGAAGGCGTTGTGACCCGTTGGGGCGTGACCCGTTTACCCAGGAAGACCCACCGTGGGCTCCGTAAGGTTGCGTGTATCGGAGCGTGGCACCCTGCTAGGGTTTCCTTCACTGTTGCAAGAGCTGGACAGAATGGGTATCATCACAGAACTGAAATGAATAAGAAGATTTATAAACTTGGGAAAGCTGGACAGGAATCGCACTCTGCAATCACTGAATACGACAGGACTGAGAAGGAGATAACGCCGATGGGTGGGTTTCCGCATTATGGGGTGGTGAAGGATGATTTTTTGATGATAAAGGGATGTTGTGTGGGGCCCAAGAAGAGGGTGGTGACGTTAAGACAGTCTTTGTTGAAACAGACATCGAGGCTTGCTATGGAGGAAATTAAGCTTAAGTTTGTTGACCCGTCATCCAAGTTTGGGCA | |||||||||