miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TCCCCACGGTCGGCGCCA
species: Brachypodium distachyon
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|270447644|gb|GT830540.1|GT830540 CCYO13137.b1 CCYO Brachypodium distachyon flower + flower drought Brachypodium distachyon cD

TCCCCACGGTCGGCGCCA
|||||||..||..|. ||
AGGGGTGTTAGTTGTTGT

EST sequence (targeted fragment marked with yellow):
GGGTTTCGGTTTTGTTGGGTGCGATTGGGTTTAGTGCGGCCGTGCAGGGTGTCTAAGCGAGTTGGAAATTGCGTGGTTTTGGGTTCATGTTTTCATCGTATCATCAAGGGTTTTATGGTGCAAGGTGGAGATATAACTGCTGGTGATGGAACTGGGGGTGAGTCAATATATGGATTGAATTTTGAGGATGAGAATTTTGTTTTGAAGCATGAGAGGAAGGGGATGTTATCAATGGCCAATGCTGGTCCCAACACAAATGGATCTCAGTTTTTCATAACTACCACCCGAACACCACACCTTGATGGTAAACATGTCGTTTTCGGGAGAGTTGTAAAAGGAATGGGGGTGGTTCGCGCAATGGAGCATATTTCTGCTGGAGAAGCTGACCTTCCGACTGCCGATATTGTTGTTGTTGATTGTGGGGAACTGCCAGAAGATGCAAATGATGGAGTTGTAGACTTTTTCAAAGATGGTGACATGTATCCTGATTGGCCAAATGATCTTGATGAAAAGCCTGCAGAAGTTTCGTGGTGGATAGATGCTGTTGATTCCGCAAAGTCTTTCGGAAATGAAAACTTTAAGAAACATGATTACAAGGCCGCCCTCAGAAAGTACAGAAAAGCTATGCGGTATTTAGATCTTTGCTGGGAGAAAGAAGAGATTGGATCAAGAGAAGAGCTCAGCACTGCGGAAAACAAAGTCAATTATACTCACGAATAGTTCTGCATGCAAACTGAAGTTGGGCGGACGTGGAGGGTGGC



gi|270405535|gb|GT783770.1|GT783770 CCXG1087.g1 CCXG Brachypodium distachyon superpool Brachypodium distachyon cDNA clone CCXG10

TCCCCACGGTCGGCGCCA
| |||||||||. |||||
ATGGGTGCCAGT-GCGGT

EST sequence (targeted fragment marked with yellow):
CGTGGCTTTTGCCGACGTCGACGACGACGGGTGTCATGATCTTCTTGAAAGCGCTTGAAGCGTCGTTGTGGTTCCTCTGCGGCTCTGTCTCCTTTGACACCGGGAGAAACCCTTGGTCTTGTTGACAGACCCGACAGCGACGGCGCTGCAATGTCATTTTTTTTTTCCTTGAGAGCGTTGGTGGCCTTGGAACCTTTCAGCAAGCATGGAGGCGGTGGGGGATGGTGCCGTCCCATGCCTGAGATGCTGGATTTCTGGGCGCGATGCACCCCATCCTCGATGCACCTTGGACAATCCCCTTCCTCGGTTCTGGCCTGTTGCTGTCCCACCCATCGATCTTCTCTCTTGGCGTGACCGTGGGTAAGTTCGGGGCGGTCCTGATGTTGCGGTCATTATTCGAGAAGCTTGGCGGTGGGCGGGAAGCCGTTGTTGTCGTCTTGTGCGCAATGTCTTTGTCTTTTAGGCTTGGTGTTGTGCAGGGAGTTTGTTGTGGCTGCAACCGCTTTTTAGTCCAAACTAGCTAGGTTTTGGTGGAGTGGGTTTTTTATCTGTCATTTGATGGCGTTGTTCTTGCCGTCTCGATATTGTACCAGTCTTCTGCCTCTTCTTCTTTGAGTGTTGCATTAGAG



gi|270383481|gb|GT765526.1|GT765526 CCXF5433.g1 CCXF Brachypodium distachyon abiotic + biotic stress pool Brachypodium distachyo

TCCCCACGGTCGGCGCCA
.| ||||||||.||.| |
GGCGGTGCCAGTCGTGCT

EST sequence (targeted fragment marked with yellow):
CTTTCAAAAAAGGGAGGATGATATGGACATGCTAACCATGGATACGACCTTTGGTACCCTCAATTTTATAATATTTGACAAGATTCATAATCAGGTGAATTCAAGAAGTAATTGTTTTCATTGTCATATTTATGAAGAGGCGGAGCTATTACTATCTTGTCTCGTTTTATTACGTAGGCATCTTGTCGAGCTTTTCAAGTCCAAAGTCAAGATGAGATACGATGGAGGCGAACGGGAGGGCCAACAAGAATCAAGCATTCATACAGCTGAGAGGGAAGGATTTCAAGTGTACTTTCCAACAAATCAAACGGCACATGATTCGGAGCTTGCTAGAGAAAGATATCATGAATTAAAGTTGAATCCGATTCGGGTCCGAGCTGTCAGGAGACCCGAATTTGTTTTAATCACCCAGGCCGCATCCGGAGTCCAAATCAAGCAAACAAGTACTTGTTGGAAAGGTAATTACAAGACCTTTCCAACAGATCTGGCCCCATCAAGAGATTCAACTCGTGCTGACCGTGGCGGACAAAACAAGCTGACGGATCTGTTTTTCTGTTTCCTAAAGAGTTGTAGTTTGTTAGGAAAGTTAGAGATAGAGTTGGATTTCGGACTCCATACTCAACGTGGACGAAAATATCTCTCCCTCCTCCTTTATATACCCCATGAGCCCCCTAAGGAGCCTTGGATTTTGTTTAGTTAAAAGTTAGCCATCGCTACTATTTCGTGTAATCGCGTGTGTCGGTTAGACCACCTGTTTTACCGCTTTCGGAACCTC



gi|78013174|gb|DV481562.1|DV481562 5346_F03_K06Z_021 Brachypodium distachyon stem plus sheath EST library Brachypodium distachyo

TCCCCACGGTCGGCGCCA
. ||||||||||| |||
GAGGGTGCCAGCCTCGGC

EST sequence (targeted fragment marked with yellow):
CCACGCGTCCGGGCGACAAGCATGGGGGGTTCCGTGGGGGTGGCGCCAGCCGTGTGAGTGGACGTAAAGGATAAGGGCCTGCAGGTGTGAGATCTTCCATCCATCCATCCCCTGCCTCTGCGGCTGTGCCCTAGTGAGCGATCGACTGCATGTGGGGCGACGTGGTGTCGCTGGTCCGGCAGGGCCTGCGGTGGCGGCGGCGGAGGGGGAGGAGGTCGGCGGCGCGGGTGGTGGACGAGAGCGCGCTCGCCGTCGTCGTCGCCGCCGAGGACGGCAACGGCGGCGCGCCCGCGGCGGCTCCGACCGTGGGAGGCGCGCTGGCCAGGGCGCTGCTGGCGCTGGCGTGCGCTGTCCGCTTCGACGGGGACGGCCTGTCCACGGAGGACGCCTGGGCGGCCAGCGCGT



gi|270411072|gb|GT792647.1|GT792647 CCXG5930.b1 CCXG Brachypodium distachyon superpool Brachypodium distachyon cDNA clone CCXG59

TCCCCACGGTCGGCGCCA
| ||||||||. |||||
TGAGGTGCCAGTAGCGGT

EST sequence (targeted fragment marked with yellow):
GAGACGACGAAAGGAAAGGTGCTCGCTCGGTCGCCGGGGAGATTCTCGCCGCCGCCGGAGATGGCGATGACCGTGGAGTGCTCGCTGGACTTGCGTGTATGTTCTCCACGAGCATTCTCTTGCAAATCTTGGCATGTGCTTTGTACAACAATTGGTGGCCTATGTTAGCAGCACTCATGTATATCCTCGTTCCAATGCCATGCCTATTCTTTGGTGATGGATCCACACGGTTCTTGACTACTGGAGAGGGTGGAGCGTGGATCAATGCTGCAAAGTTTCTGACCGGAGCGTCTGCCATGGGCAGCCTCGCTATCCCAGCGATCCTGAGGCATGCTGGCCTGATCGAGACCGGGGCCATGTTCATCGAGTTCACGTCCTTCTTCATTCTTGTGTGCACGGTGATGTGCTTCCACAGGGCTACCCTGGACGAAGATTGGTGAAAGGTGCAAGACAGCCAAGGAGTACCCAAGAAGAAGAGCAGTGCTGGTGTCGCTTCGCCTTCTCTCTTGACACCTGAAAAGAATTCCCTTGGTGGGAGCTAACATGGAACTGTGTACAAAGAAGCATGTTTCAAGTGCATGACTACTATATGGAGTATAAATGTAGTTAAGATCCTGCAGTCAAGTGGCAATGCCATTATTTTACTTCACTTCTTCATGTCAAGTTTTTCTGTGTGTTATCCATGGCGAACTGCCGTTGTAAACATGACCTGGTGCACTGATGA



gi|270425640|gb|GT808033.1|GT808033 CCXG14768.g1 CCXG Brachypodium distachyon superpool Brachypodium distachyon cDNA clone CCXG1

TCCCCACGGTCGGCGCCA
.||||||| ||. |||||
GGGGGTGCGAGTAGCGGT

EST sequence (targeted fragment marked with yellow):
ACCAAACACAAGCATCACTTAAGCAGCTCCATCAGTTCTGAGTTCTCTAGCTACTACACTTGCTAAACTACAGCGATCACAGTTCACAGATCAGTCTCCACAAACGCAGCAGCAGCAAGAAGATTAGAAGAAGATGGCTGGTGTGGCTAAGGCGTCGTGGATGGTGGCGATGAGCGTGGGGGCCGTGGAGGCGCTCAAGGATCGGGCCAGGCTCTGCCGCTGGAACTACGCTCTCAGGTCCATCCACCGCGCCGCCAAGGCCAACGTCCAGGCAAGGGGCGGCCTCTCGCAGGGCAAGAAGCTGTCCCCTGCCGCGGCGATGGCAGAGAGGGGGAGAGCTGAGAAGGCAGAGGAGGGGTTGAGGACGGTCATGTACCTCAGCTGCTGGGGTCCCAACTAAGCTAGTAGTGTTATTAGCAGCAAAATTAGCCATGGCCTGCTATGCTACTTGGCTGGTTAATTGCCTCCTGATTGTAAATATGGACCACGATGATGATGATGAAAATTTCTGCCC



gi|270391385|gb|GT774266.1|GT774266 CCXF10561.g1 CCXF Brachypodium distachyon abiotic + biotic stress pool Brachypodium distachy

TCCCCACGGTCGGCGCCA
.||||||| ||. |||||
GGGGGTGCGAGTAGCGGT

EST sequence (targeted fragment marked with yellow):
GACCAAACACAAGCATCACTTAAGCAGCTCCATCAGTTCTGAGTTCTCTAGCTACTACACTTGCTAAACTACAGCGATCACAGTTCACAGATCAGTCTCCACAAACGCAGCAGCAGCAAGAAGATTAGAAGAAGATGGCTGGTGTGGCTAAGGCGTCGTGGATGGTGGCGATGAGCGTGGGGGCCGTGGAGGCGCTCAAGGATCAGGCCGGGCTCTGCCGCTGGAACTACGCTCTCAGGTCCATCCACCGCGCCGCCAAGGCCAACGTCCAGGCAAGGGGCGGCCTCTCGCAGGGCAAGAAGCTGTCCCCTGCCGCGGCGATGGCAGAGAGGGGGAGAGCTGAGAAGGCAGAGGAGGGGTTGAGGACGGTCATGTACCTCAGCTGCTGGGGTCCCAACTAAGCTAGTAGTGTTATTAGCAGCAAAATTAGCCATGGCCTGCTATGCTACTTGGCTGGTTAATTGCCTCCTGATTGTAAATATGGACCACGATGATGATGATGAAAATTTCTG



gi|270455236|gb|GT837629.1|GT837629 CCYO9778.g1 CCYO Brachypodium distachyon flower + flower drought Brachypodium distachyon cDN

TCCCCACGGTCGGCGCCA
.| ||||||||. |||||
GGAGGTGCCAGTGGCGGT

EST sequence (targeted fragment marked with yellow):
GACCCTTGAGGAATTTGAGAAAGTATTGGAGGAGAAGCGGAAAGCGCTTCTTGCTTTGAAGTCTGAAGAGAGGAAGGTTGAAATTGATAAGGACCTGCAGGCTATGCAACAACTTTCCACCAAGAAAGGAAATGATGAGGTTTTCATCAAACTGGGTTCTGATAAGGATGCTCTGAAGAAGAAAGAAAATGCTGAACGTGATGAGCGTGCTAAGAAGTCTGTGAGCATCAATGAGTTCTTGAAGCCTGCTGAAGGAGAAAGGTTCTATGGTGGCAGAGGCCGTGGCAGGGAACGTGGCGGTGACCGTGGAGGCTTCAGGGGTGGAGCTGGTGGTGGTGGTTATCGTGGCCCACCTGCTGCTCCAGCAATTCAAGACCAGAACCAGTTCCCAACTCTTGGTGGGAAGTGAAAAAAAAATCTGCATGTACCATCTCAATTCTGAAGTATCTTTACGATTTCGTCTACTGGCAACTTTAATTTTGTTCTCCCATATAATTTCAGTCGTACTTCTATTCAAGACAAATAATTGTGCTGTATCTGGATTATTCACCCCTTGTGTCAGTCGACTTTGTAAATCCGAGTTGTTCGTCACTTGTGAGAATTTTGTAGTGCTATTTTCTTTACCCTCCACATCACTAATTCTGCGTGTTTAGTCCTCG



gi|270445130|gb|GT825280.1|GT825280 CCYO845.b1 CCYO Brachypodium distachyon flower + flower drought Brachypodium distachyon cDNA

TCCCCACGGTCGGCGCCA
| ||||||||| |||||
CGTGGTGCCAGCGGCGGT

EST sequence (targeted fragment marked with yellow):
GGACGGAAGCCAAACCCTAGCGCTCGCTTCTTCTTTCTTTCTCCCCTCGTTCTTGCCGCTTCCGATTCCGTCGTAACCTCTTCGTCGCCGTTGTCGTCTCCTCCTCTTCTCACCAAAACCCTAATCTCAGCCGAGGTCGGAGGTACCGGCAATGGCAGGGAAGGAGGAGAGCCGGATCTTCGTGGGCGGTCTGTCGTTCCACACCGACGAACGCAAGCTCGAGGAGGCCTTCCGCCGCTTCGGCAAGGTGGGGGGAGGCGCAGATCATGCTGGAGAGGCACACAAACCGCCACCGTGGGTTTGGCTTTGTGACGTTCTCAGATCCACGGGCAGTCGAGAGTGCTATTAGTGAGATGCACACCAAAGAGTTAGATGGACGGACCATTTCAGTGAACAGGGCGGAGCCTAAGATGAATACAGATGACACAAGGTACAGCAGTGGCGGCGACCGTGGTGCTGACCGTGGGGATTATCGTGGTGGTAAGGGTGATGGCCCACCCCCTGGCAATTGCTATCAGTGTGGTCGTGCTGGTCATTGGGCTCGTGACTGCCCTAATCCTGCTGGAGGTCGTTCTGGGCAATTATCTTCCAAGTTCAGTGGCGGTGGTGGCAGGGAGACCGTTTTTCTGGATCAGATAGGTTTAGTGACCGTTACATGGATGATCGTTATGATGGTGGCCGTTATGGATACCGTGACCCTATTGATAACAGAGA



gi|78000560|gb|DV468948.1|DV468948 5402_G10_G10ZR5_068 Brachypodium distachyon callus EST library Brachypodium distachyon cDNA c

TCCCCACGGTCGGCGCCA
|| |||||||| |.|||
AGAGGTGCCAGAGGTGGT

EST sequence (targeted fragment marked with yellow):
GGAAGCTGGTACGCCTGCAGGTACCGGTCCGGAATTCCCGGGTCGACCCACGCGTCCGGGTGGTAGGCCGGTATGGCCAAGGTATGGATCGGAGACTAGAACGCGCAACTCGGTCTAGAGTTCCTTTGTGATGTTATCGATTCATGGTTTGTTTTGTCCTGATTCCGGTGCGGCAGTGGAGGACGAAGAAGACGGCGGCGGCGGCGGCGAGCGGCGGTGATAAGGCAGGGGGAGACAAGCTGCTGCCGCCGGTGAAGGGTCGTCGCAGCGATGCGCCGGCAGATCAGGAGGTGGTGATGATCAGCGTGCCGGTGCACTGCGATGGCTGCGCCAGGAAGGTGCGCAGGTCTCTGCTGCGCCTCGACGGGGTTGAGGAAGCGACCGTGGAGTACTCGACCAACACGGTGGTGGTGATGGGCCGGAAGGCCCTGTACGACCCTATGAAGGTGGTGGAGACCGTGGAGAGGATGACCGGGAAGAAGGCGCTGCTGCTGAACCCATCGCCGGGCAAGCT



gi|270482943|gb|GT864147.1|GT864147 CCYP15946.g1 CCYP Brachypodium distachyon leaf + leaf drought Brachypodium distachyon cDNA c

TCCCCACGGTCGGCGCCA
|||| ||||||| |||||
AGGGATGCCAGCAGCGGT

EST sequence (targeted fragment marked with yellow):
CACCCGTCTTCGGCCACTTTTACAGGCCCTGAAATGTGATCACTGGTTTGATGCTGTTGCTGTATCTGCTGAGGTTGCAGCAGAAAAAGCCAAATCCAACAATATTCTTGAAGGCCTGCGAGTTGTTGGGCGTGAAACCTGAAGAGGCTGTGCATATTGGCGACGACCGTAGGGAATGATTTATGGGGAGCTAGGGACGCAGGCTGCGATGCCTGGCTTTGGGGCAGTGATGTTCACTCTTTCAAGGAGGTCGCGGAGAGGATCGGAGTTAAGGTGGGAATGGGCAACTCTATGTGATCCTCTACGCTTTACTGCATAGCGGTCAGCGGCACTTCTTCGGCTCCGCAAATCGCAACACACCGCTTCTTCCAGGCGAGCATGCTCACCGAGCCGCCGGCGATCCCCCCCTGAGGTTCAATAAAAAAGGGCTGGGAGGAGGTGTTTGGCCTCCCCTTTGTATATAGCGCCGGCCCCTTCTTGCCCGGGTGTTCCTGGGTCGCTGGCTGTCCGCTGTACATAGTTTCCAGTGAACTGATCGGTAGCGTCTCGTCAGTGTCCTTACATAGTACTACTCCCTTTGTATTAGGCGCTCTTGTATTATGGGACGGACGAGTACTATATATACTACTCCTATATTGCAGTGACAATGGATCTATTCATTTAATCCAGCTCAGTTTTCCCCATTGTC



gi|270483150|gb|GT864354.1|GT864354 CCYP16067.g1 CCYP Brachypodium distachyon leaf + leaf drought Brachypodium distachyon cDNA c

TCCCCACGGTCGGCGCCA
.| ||||||||. |||||
GGAGGTGCCAGTGGCGGT

EST sequence (targeted fragment marked with yellow):
CGGGGAAGAAAAGGAAGAAGATAAGGAGATGACCCTTGAGGAATTTGAGAAAGTATTGGAGGAGAAGCGGAAAGCGCTTCTTGCTTTGAAGTCTGAAGAGAGGAAGGTTGAAATTGATAAGGACCTGCAGGCTATGCAACAACTTTCCACCAAGAAAGGAAATGATGAGGTTTTCATCAAACTGGGTTCTGATAAGGATGCTCTGAAGAAGAAAGAAAATGCTGAACGTGATGAGCGTGCTAAGAAGTCTGTGAGCATCAATGAGTTCTTGAAGCCTGCTGAAGGAGAAAGGTTCTATGGTGGCAGAGGCCGTGGCAGGGGACGTGGCGGTGACCGTGGAGGCTTCAGGGGTGGAGCTGGTGGTGGTGGTTATCGTGGCCCACCTGCTGCTCCAGCAATTCAAGACCAGAACCAGTTCCCAACTCTTGGTGGGAAGTGAAAAAAAAATCTGCATGTACCATCTCAATTCTAAAGTATCTTTACGATTTCGTCTACTGGCAACTTTAATTTTGTTCTCCCATATAATTTCAGTCGTACTTCTATTCAAGACAAATAATTGTGCTGTATCTGGATTATTCACCCCTTGTGTCAGTCGACTTTGTAAATCCGAGTTGTTCGTCACTTGTGAGAATTTTGTAGTGCTATTTTCTTTACCCTTC



gi|270482364|gb|GT865611.1|GT865611 CCYP9893.b1 CCYP Brachypodium distachyon leaf + leaf drought Brachypodium distachyon cDNA cl

TCCCCACGGTCGGCGCCA
| |||||||||.|||||
TGCGGTGCCAGCTGCGGT

EST sequence (targeted fragment marked with yellow):
GTACACTTGAATTAACTTGCCGTGAATCTATTGGATTGAGCAGGGCGTTCCTTGTGATCCAACTCATCAGCGTCACCAGGTTCATCACCTGGATCAACGACTGCTGCCGCTCCGAGACCAACCTCAAGAAATGCCACATGCACGTGCTGGTGGCGTCGACCGTGGCGTACGTGGGCGCCGTGCTGGGGATCGCGCTCATGTACGTGTGGTACGTGCCGAGGGCGTCCTGCAGGCTCAACTCCATCTTCATCTCCGTCACACTCCTGCTCGTGCTGCTCATGACCTTCGTCTCTGCCAACTCCAAGGTCAAGGCCGGGTACCTGGCGCCCGGGCTCATGGGGGTCTACGTCGTCTTCCTCTGCTGGGCCGCCATCAGAAGCGAGCCGCACACGGAGGTTTGCAACAGGAAAGCGGGCGCCGCAACCAGCGCAGATTGGCTCAACATAGCGAATTTTGTGATCGCGGTGATCGTGATCGTCGCGGCGACTTTCTCGACGGGGATAGATTCAAAGTGCCTGCAGTTCAAGAGCAGCGAGACGGACTCGGAGGACGACATCCCCTACGGCTTCGGCTTCTTCCACTTCGTGTTCGCCATGGGCGCCATGTACTTCGCCATGCTCTTCGTCGGCTGGAACGCGCACCAGAAGATGGAGAAGTGGACGATTGATGTGGGCTGGGCGAGCACGTGGGTGCGTGTGGCCAACGAATGGCTAGCGGCGATGTGTACATATGGATGGT



gi|270426372|gb|GT810478.1|GT810478 CCXG16168.b5 CCXG Brachypodium distachyon superpool Brachypodium distachyon cDNA clone CCXG1

TCCCCACGGTCGGCGCCA
|||||| |||||||. ||
AGGGGTTCCAGCCGTCGT

EST sequence (targeted fragment marked with yellow):
CGAGGAAAAGTTGTCGTTCCTGCTCCGCCCGCGTTCAGTTCTGCTGTCGTCTGTGGCCGTGGGGAGTCTGGTTGCTGCTAGTGCCGCGAATGCTGCCGACCTTGGGGATTCTCTGATAGGACCGCCGGGCCTTCTCTTGGCTGACTTAAGCATTGGAGATTGGTTTGGAGGATTGTTATTTTCAGCTGGGCAGCAAGCTAACGAGGCTGTTCTGGATCAATTGTCTGCTCTAAGTTTCACTAGTTTGGCAGTAATTTTTGGTGCTGGACTTGTAACTAGTTTGTCTCCTTGTACACTCAGTGTTCTGCCACTAACTCTAGGATATATAGGCGCTTTTGGGGCTGGAAAAGATCGAACTGAGGTTGTTGGAAATTCAGTTGCTTTTTCATTAGGACTGGCAACAACCTTAGCCATCCTTGGTGTCGCTGCTTCTTTTGCTGGCAAGGCCTATGGGCAAGTAGGACAAGGCCTCCCAGTGGCTGCTTCTGGATTAGGAATCATCATGGGATTAAACCTTCTGGAGGTAGTTGAGTTACAACTTCCCTCATTTTTCAGCGATTTTGACCCTCGAGCTGCTGCAGCTAACCTGCCTCCCAGTGTACAAGCATATCTTGCTGGCCTTACATTTGCATTAGCAGCATCACCTTGCAGCACACCTGTTCTTGCGACCCTTCTGGGATATGTTGCCACTTCAGAGATCCGATTGTTGGGGGAAGTTTGTTGTTGACGTATACTACTGGCTAT



gi|270429271|gb|GT811664.1|GT811664 CCXG9928.b1 CCXG Brachypodium distachyon superpool Brachypodium distachyon cDNA clone CCXG99

TCCCCACGGTCGGCGCCA
|||||||.|||||| ||
TGGGGTGCTAGCCGCCGT

EST sequence (targeted fragment marked with yellow):
GTTATTCGGTGCAACAGCAAAATCGATCGCAATGCCTTGCGTGCCAGCTCCAATCTCCTCCCTCCCTCTCCAATAATCCGTCTCCATCTCCAACAGCAATCCTTCCCACCCCCGCGATAATCTAGCCCCCCCGATTCTTCCGAGTTCAGTTACTACTGGTGCTAGTATACTTGTATCCACCGCTCGATAATCTGCGTGGGGTTTAACAGCTCCGCCCGCTCCAAGGTCCGCCTTTTCTTCTTCCAACAAACTCGCGATACGGTAGCGGAGAGGAAGGAAGGAAAGAAACCCGCCCGGATTCGAAGCGGCGGAACCCGATTCCGCCCTTGGATAAATTGCCGCCGATCGTGGGGTGCCAAGGCTTATTACCTATTTCTTCCTAGTGCGGCGGGCGGGGGCGCCGGATTCCTTGTTGGTTGCTCCGTTTGGTTTTGCAGGGAAGAAGACAGGTTTAGATGGGGTCCATCCTGTGCTGCTTGCGCGGCCCCGACGATGCGCCGGGCTGCTGCTTATGTCTGCCGTGGCCTTTCTTGAACAACAGCAGCACCACCAACTCGGGCGCCACTGCTCGTCAAAGAGCGGATACACGGGTCGCACCTGTTCAGGGGAGAGTTCCTCTTGCAGTTTCCGCTGGTTCGAGGCAGGAGGATTCAATGAACACCTTTCGCTGTCCTCCAAGGCCTTTGCCTTACGATGACCCTCGATTCAGCCATCAGACGGAGCACCACCCACTAGTGTCAGAACATGAGAAAGCATC



gi|270474797|gb|GT854747.1|GT854747 CCYP10597.g1 CCYP Brachypodium distachyon leaf + leaf drought Brachypodium distachyon cDNA c

TCCCCACGGTCGGCGCCA
.||||||| ||. |||||
GGGGGTGCGAGTAGCGGT

EST sequence (targeted fragment marked with yellow):
GAACACAAACACAAGCATCAATTAATCAGCTCTGTCAGCTCTTCCGATACAGATCAGTGTCCCCGAACCCAAGGAGCCAACGCATCTTGAGGAGAATCTATGGCTGGTGCAGCGAAGGCGTCGTGGATGGTGGCGATGAGCGTGGGGGCCGTGGAGGCGCTCAAGGACCGGGCCGGGCTCTGCCGCTGGAACTACGCTCTGAGGTCCATCCACCGGGCAGCCAAGGCAAACGTGCAGTCAAGGGGCGGACTCTCGCAGGGCCAGAAGCTGTCTCCTGCCGCGGCGATGGCGGAGAAGACAGAGGAGGGGCTGAGGACCGTCATGTACCTCAGCTGCTGGGGTCCCAACTAGTAGCAATTCTAGTTAGCTAGTGGTGTTTTTAGCTAGCAGCAGCCGTGCATGGCTTGGCGCTGCTGGGTTGCCACCGGAGTCCGGTCTGTAAATATGGAGTACAACGGTACAATATGTACTTGGATGATGATG



gi|270395668|gb|GT782516.1|GT782516 CCXF15847.b1 CCXF Brachypodium distachyon abiotic + biotic stress pool Brachypodium distachy

TCCCCACGGTCGGCGCCA
.| ||||||||. |||||
GGAGGTGCCAGTGGCGGT

EST sequence (targeted fragment marked with yellow):
GCGGTGAGATGACCCTTGAGGAATTTGAGAAAGTATTGGAGGAGAAGCGGAAAGCGCTTCTTGCTTTGAAGTCTGAAGAGAGGAAGGTTGAAATTGATAAGGACCTGCAGGCTATGCAACAACTTTCCACCAAGAAAGGAAATGATGAGGTTTTCATCAAACTGGGTTCTGATAAGGATGCTCTGAAGAAGAAAGAAAATGCTGAACGTGATGAGCGTGCTAAGAAGTCTGTGAGCATCAATGAGTTCTTGAAGCCTGCTGAAGGAGAAAGGTTCTATGGTGGCAGAGGCTGTGGCAGGGGACGTGGCGGTGACCGTGGAGGCTTCAGGGGTGGAGCTGGTGGTGGTGGTTATCGTGGCCCACCTGCTGCTCCAGCAATTCAAGACCAGAACCAGTTCCCAACTCTTGGTGGGAAGTGAAAAAAAAATCTGCATGTACCATCTCAACTCTAAAGTATCTTTACGATTTCGTCTACTGGCAACTTTAATTTTGTTCTCCCATATAATTTCAGTCGTACTTCTATTCAAGACAAATAATTGTGCTGTATCTGGATTATTCACCCCTTGTGTCAGTCGACTTTGTAAATCCGAGTTGTTCGTCACTTGTGAGAATTTTGTAGTGCTATTTTCTTTACCCTCC



gi|78020523|gb|DV488910.1|DV488910 5651_F08_K15Z_054 Brachypodium distachyon root EST library Brachypodium distachyon cDNA clone

TCCCCACGGTCGGCGCCA
|| |||||||.||||||
CGGTGTGCCAGTCGCGGT

EST sequence (targeted fragment marked with yellow):
CAGCACCACTACTCTGATAATTTCGCCTACCTAAAAGGTCCTCTGCTTCCTGCACAGAACAGCACAAGCGTCGACAGAGCTTAGCTTTCCATCCATGACCAAGGTGCACCCAAACGCCGCGGCGGTAGCTGCTTCTCTGGCAGTAGCGGAGGAGAAAAGGGAGGCGACGGCGGTTGCTTCTCTGGCAGCAGCGGGGGAGAAGAGGGAGCCGGTGGCGCTGACCGTGTGGCGGCGGTCGTTGCTGTTCAACGGGAAGGGGTTCACGGTGTTCGACAGCAAAGGCGACCTCGTCTTCCGCGTCGAGACGTACGCCGGCGGCTCCCCCCGCGAGGTCGTCCTCATGGACGCCGACGGCCGCGCCCTTCTCACCATCTGCCGCAAGAAGCTGAGTCTAGCGGACGAGTGGTCGATCATGGACGGCGACGCGGCGTCGGCCGCGCCGAAGCGGTTCACGGCGCGGCGGAATATGAGCCTGCTCCCGACCAAGTCGCTCGCTCGCCTGTCGTCGGTGCGAGGAGCGTCCGACCGCGGGGACGCCCCCCGGTACCACGTGGAGGGCTCCTACTTCGGCCGCAGCCTCGACATGTTCGCCTCGG



gi|270449415|gb|GT831404.1|GT831404 CCYO13616.g1 CCYO Brachypodium distachyon flower + flower drought Brachypodium distachyon cD

TCCCCACGGTCGGCGCCA
||| |||||||.| .|||
AGGAGTGCCAGTCTTGGT

EST sequence (targeted fragment marked with yellow):
GAATCCACTCGGCGCTCTGCTGTTCAGCAGTCTGGCTGGGTATATCTATGATCTTGAAGCGGCGAAACAGCACAGCGCTGGAGCAGCAGTGGGCTCTGATCATGTCACGGTATGCCACGGGCCCAGCTGTTTCAGGCTCATGTTCTGTGTTCTGTCAGGGATGGCATGCCTGGGGACATTGCTGAGCGTGGTTCTGACCGTGAGGATTCGACCGGTTTATCAGATGCTCTATGCAGGTGGATCCTCGAACCAGCTCAGGAGCTCTGCACATTGATGGACGGTGACCGGTGAGCTTGCTTAGTGATATGTTGTAATGTATTGTACTTGAAACACGAGCACGGGCTTATTTCATTTTGGGTCTGTACTGTGGTTTTGGGACCTGGCTCTTGACTACTTCAGTCTTGGTCTATACATATGGTGAGGAATGACATGTGGTATTTTTTGTCATTGCTGGTTTCTGGTTGATCCACTGGGCTGGAGCATGAACCCGAGGATATAATAGCTGAGTTGCTATGCTTGTATATAAGTGCAAATTGGGATGTGTC



gi|78018457|gb|DV486844.1|DV486844 5519_C09_F17RZ_075 Brachypodium distachyon root EST library Brachypodium distachyon cDNA clon

TCCCCACGGTCGGCGCCA
|||| ||||||. |||||
AGGGCTGCCAGT-GCGGT

EST sequence (targeted fragment marked with yellow):
CCACGCGTCCGCCCTGTTACACTGTACACAACAGCATGGCGCTTACTTGCCTCCTCATCGTCCTCCTCTGCGTCTCACTGTCGCTCCTCTTCGTCAACCATGCAGAGGCGGGAGAGGTTGGGGTGAGCTACGGAAGGATCGGGAACAACTTGATGGACCCAGCGTCGGTGGTCCAGCTTCTGAACCAGAACGGGATCACGTCGATCAGGGTGTACGACACCGACGAGGCGGTCCTGAACTCGATGGCGAACACCGGAATCAAGATCCTGGTGGGTCTGCCCAACGAGCTGGTAGCCTCTGCGGCGGACGACCCTTCGTACGCGCTCCGGTGGGTGCAAGACAACGTGAAGCGGCACTACCCCGACGCGAAGATCAATGGCGTGACCGTCGGGAACGAGGTGTTCAACCAGGCAAGCCAACTCACCTCGAAGCTGGTCCCGGCCATGAAGAACGTCCAGGCGGCTCTCGCCAGGCTAGGCCTGGCGGACGCCATCAAGGTGACCACGCCGATCGCGTTGAACGCGCTCAAGCAATCGTCGCCACCGTCGCAGGGCGCGTTCCGGGACGACATCGCGCAGTCGGTGATGAGCCCCATGCTCGACTTCCTGGACCAGACGGGTTCTTACCTCATGGTCAATATCTACCCGTATTACACGTACAAGGATCAGCAAGGCGATTTCTCCCTCGCCTACGCGACGTCGGGGCAGAACGACGGCGTGCTCGACTCTGGGACGGGAGTCAGGTACTACAGCCTGTTTGACGCGCAGCTAGCCGCCGTGCACTATGCGAACCGCAGGCGCGGCCACCCAAGGTGCACGTGGTGGTTGGGGAAAACGGGGT



gi|78004627|gb|DV473015.1|DV473015 5443_G03_N05Z_019 Brachypodium distachyon callus EST library Brachypodium distachyon cDNA clo

TCCCCACGGTCGGCGCCA
|| |||||||| |.|||
AGAGGTGCCAGAGGTGGT

EST sequence (targeted fragment marked with yellow):
CCTTTCGTCCGGGTGGTAGGCCGGTATGGCCAAGGTATGGATCGGAGACTAGAACGCGCAACTCGGTCTCGAGTTCCTTTGTGATGTTATCCATTCATGGCTTGTTTTGTCCTGATTCCGGTGCGGCAGTGGAGGACGAATAAGACGGCGGCGGCGGCGGCGAGCGGCGGTGATAAGGCCGGGGGAGACAACCTGCTGCCGCCGGTGAAGGGTCGTCGCAGCGATGCGCCGGCAGATCAGGAGGTGGTGATGATCAGCGTGCCGGTGCACTGCGATGGCTGCGCCAGGAAGGTGCGCAGGTCTCTGCTGCGCCTCGACGGGGTTGAGGAAGCGACCGTGGAGTACTCCACCAACACGGTGGTGGTGATGGGCGGAAGCCTCCTCAAAAACCCGATGAAGGTGGTGGAGACCGTGGAGAGGAGGACCGGGAAGAAGGCGCTGCTGCTG



gi|78008959|gb|DV477347.1|DV477347 5573_G03_N05ZE5_019 Brachypodium distachyon developing spike EST library Brachypodium distach

TCCCCACGGTCGGCGCCA
|| ||||||||.||| ||
AGTGGTGCCAGTCGCAGT

EST sequence (targeted fragment marked with yellow):
CCACGCGTCCGCACAAGGCCACGCTGACACTAGCCAACTAGCCACCATGGCATCCTCTCCTAAGCTTTTTCTCCTGCTCGCCACCTTGATCCCAAGCTGCGGCCTCCTCCTCGCAGACTTCGCCCCGATGACGCTGACCGTGGTGAACAACTGCCCGTACCCGATCTGGCCGGGCATCCAGGCCAACGCCGACAGCGAGGTCCTCGAGGGCGGCGGCTTCTACCTCCCGGCGCTCTCCCACCACTCCTTCCCCGCCCCGACCCACGCCTGGTCGGGCCGGATCTGGGCGCGCACCGGCTGCGCCCCGGCCGGCGGCGCGCAGGAGCTCCGCTGCGCCACGGGCGACTGCGGCGGGCGGCTCCAGTGCGGCGGCCTCGGCGGCGCCGCGCCCGCCACGCTGGCCCAGGTCTCCCTCCACCACGGCGGCAACGACAACGACCAGTCCTCGTACGGCGTGAGCGTGGTCGACGGCTTCAACGTCGGGCTTTCCGTGACCCCGCACGAGGGCCGCGGCAACTGCCCCGTGCTCGCCTGCCGGAAGAACCTCACGGAGACCTGCCCCAGCGAGCTGCAGGTCCGCGCCGGCGCCGGGGACGGCGTCGTGGCGTGCAAGAGCGGGTGCCAGGCGTTCGGCACCGACGAGCTGTGCTGCCGCAACATGTACAACAGCCCGCAAACCTGCCGCGCCT



gi|270411073|gb|GT792648.1|GT792648 CCXG5930.g1 CCXG Brachypodium distachyon superpool Brachypodium distachyon cDNA clone CCXG59

TCCCCACGGTCGGCGCCA
| ||||||||. |||||
TGAGGTGCCAGTAGCGGT

EST sequence (targeted fragment marked with yellow):
AAGATTCTCGCCGCCGCCAGGAGATGGCGATGACCGTGGAGTGCTCGCTGGACTTGCGTGTATGTTCTCCACGAGCATTCTCTTGCAAATCTTGGCATGTGCTTTGTACAACAATTGGTGGCCTATGTTAGCAGCACTCATGTATATCCTCGTTCCAATGCCATGCCTATTCTTTGGTGATGGATCCACACGGTTCTTGACTACTGGAGAGGGTGGAGCGTGGATCAATGCTGCAAAGTTTCTGACCGGAGCGTCTGCCATGGGCAGCCTCGCTATCCCAGCGATCCTGAGGCATGCTGGCCTGATCGAGACCGGGGCCATGTTCATCGAGTTCACGTCCTTCTTCATTCTTGTGTGCACGGTGATGTGCTTCCACAGGGCTACCCTGGACGAAGATTGGTGAAAGGTGCAAGACAGCCAAGGAGTACCCAAGAAGAAGAGCAGTGCTGGTGTCGCTTCGCCTTCTCTCTTGACACCTGAAAAGAATTCCCTTGGTGGGAGCTAACATGGAACTGTGTACAAAGAAGCATGTTTCAAGTGCATGACTACTATATGGAGTATAAATGTAGTTAAGATCCTGCAGTCAAGTGGCAATGCCATTATTTTACTTCCACTTCTTCATGTCAAGTTTTTCTGTGTGTTATCCATGGCGAACTGCCGTTGTAAAACATGACCTGGTGCACTGATTGACACCGTTTTTATTAGGTTGGTTGTCACTTCTAC



gi|270395669|gb|GT782517.1|GT782517 CCXF15847.g1 CCXF Brachypodium distachyon abiotic + biotic stress pool Brachypodium distachy

TCCCCACGGTCGGCGCCA
.| ||||||||. |||||
GGAGGTGCCAGTGGCGGT

EST sequence (targeted fragment marked with yellow):
CGGTGAGATGACCCTTGAGGAATTGAGAAAGTATTGGAGGAGAAGCGGAAGCGCTTCTTGCTTTGAAGTCTGAAGAGAGGAAGGTTGAAATTGATAAGGACTGCAGGCTATGCAACAACTTTCCACCAAGAAAGGAAATGATGAGGTTTTCATCAAACTGGGTTCTGATAAGGATGCTCTGAAGAAGAAAGAAAATGCTGAACGTGATGAGCGTGCTAAGAAGTCTGTGAGCATCAATGAGTTCTTGAAGCCTGCTGAAGGAGAAAGGTTCTATGGTGGCAGAGGCTGTGCCAGGGGACGTGGCGGTGACCGTGGAGGCTTCAGGGGTGGAGCTGGTGGTGGTGGTTATCGTGGCCCACCTGCTGCTCCAGCAATTCAAGACCAGAACCAGTTCCCAACTCTTGGTGGGAAGTGAAAAAAAAATCTGCATGTACCATCTCAACTCTAAAGTATCTTTACGATTTCGTCTACTGGCAACTTTAATTTTGTTCTCCCATATAATTTCAGTCGTACTTCTATTCAAGACAAATAATTGTGCTGTATCTGGATTATTCCCCCCTTGTGTCAGTCGACTTTGTAAATCCGAGTTGTTCGTCACTTGTGAGAATTTTGTAGTGCTATTTTCTTTACCCTCCCC



gi|270458557|gb|GT842746.1|GT842746 CCYP3721.b1 CCYP Brachypodium distachyon leaf + leaf drought Brachypodium distachyon cDNA cl

TCCCCACGGTCGGCGCCA
|||||| |||||||. ||
AGGGGTTCCAGCCGTCGT

EST sequence (targeted fragment marked with yellow):
GGAGTCTGGTTGCTGCTAGTGCCGCGAATGCTGCCGACCTTGGGGATTCTCTGATAGGACCGCCGGGCCTTCTCTTGGCTGACTTAAGCATTGGAGATTGGTTTGGAGGATTGTTATTTTCAGCTGGGCAGCAAGCTAACGAGGCTGTTCTGGATCAATTGTCTGCTCTAAGTTTCACTAGTTTGGCAGTAATTTTTGGTGCTGGACTTGTAACTAGTTTGTCTCCTTGTACACTCAGTGTTCTGCCACTAACTCTAGGATATATAGGCGCCTTTGGGGCTGGAAAAGATCGAACTGAGGTTGTTGGAAATTCAGTTGCTTTTTCATTAGGACTGGCAACAACCTTAGCCATCCTTGGTGTCGCTGCTTCTTTTGCTGGCAAGGCCTATGGGCAAGTAGGACAAGGCCTCCCAGTGGCTGCTTCTGGATTAGGAATCATCATGGGATTAAACCTTCTGGAGGTAGTTGAGTTACAACTTCCCTCATTTTTCAGCGATTTTGACCCTCGAGCTGCTGCAGCTAACCTGCCTCCCAGTGTACAAGCATATCTTGCTGGCCTTACATTTGCATTAGCAGCATCACCCTGCAGCACACCTGTTCTTGCGACCCTTCTGGGACATGTTGCCACTTCAAGAGATCCGATTGTTGGGGGAAGTTTGTTGTTGACGTATACTACTGGCTATGTTGCACCTCTTCTAATTGCAGCTTCTTTTGCTGGAGCATTGCAGAGTTTGCTCTCATTCAGAAGATATTCAACATGGATAAACCCTATA



gi|78005230|gb|DV473618.1|DV473618 5461_E08_J15ZE5_056 Brachypodium distachyon developing spike EST library Brachypodium distach

TCCCCACGGTCGGCGCCA
|||||||||||.||.|||
AGGGGTGCCAGTCGTGGT

EST sequence (targeted fragment marked with yellow):
CCATTCGTCCGCCAAAACCCTAATCTCAGCCGAGGTCGGAGGTACCGGCAATGGCAGGGAAGGAGGAGAGCCGGATCTTCGTGGGCGGTCTGTCGTTCCACACCGACGAACGCAAGCTCGAGGAGGCCTTCCGCCGCTTCGGCAAGGTGGTCGACGCGCAGATCATGCTGGAGAGGCACACAAACCGCCACCGTGGGTTTGGCTTTGTGACGTTCTCAGATCCACGGGCAGTCGAGAGTGCTATTAGTGAGATGCACACCAAAGAGTTAGATGGACGGACCATTTCAGTGAACAGGGCGGAGCCTAAGATGAATACTGATGACACAAGGTACAGCAGTGGCGGCGACCGTGGTGCTGACCGTGGGGATTATCGTGGTGGTAAG



gi|270445130|gb|GT825280.1|GT825280 CCYO845.b1 CCYO Brachypodium distachyon flower + flower drought Brachypodium distachyon cDNA

TCCCCACGGTCGGCGCCA
|||||||||||.||.|||
AGGGGTGCCAGTCGTGGT

EST sequence (targeted fragment marked with yellow):
GGACGGAAGCCAAACCCTAGCGCTCGCTTCTTCTTTCTTTCTCCCCTCGTTCTTGCCGCTTCCGATTCCGTCGTAACCTCTTCGTCGCCGTTGTCGTCTCCTCCTCTTCTCACCAAAACCCTAATCTCAGCCGAGGTCGGAGGTACCGGCAATGGCAGGGAAGGAGGAGAGCCGGATCTTCGTGGGCGGTCTGTCGTTCCACACCGACGAACGCAAGCTCGAGGAGGCCTTCCGCCGCTTCGGCAAGGTGGGGGGAGGCGCAGATCATGCTGGAGAGGCACACAAACCGCCACCGTGGGTTTGGCTTTGTGACGTTCTCAGATCCACGGGCAGTCGAGAGTGCTATTAGTGAGATGCACACCAAAGAGTTAGATGGACGGACCATTTCAGTGAACAGGGCGGAGCCTAAGATGAATACAGATGACACAAGGTACAGCAGTGGCGGCGACCGTGGTGCTGACCGTGGGGATTATCGTGGTGGTAAGGGTGATGGCCCACCCCCTGGCAATTGCTATCAGTGTGGTCGTGCTGGTCATTGGGCTCGTGACTGCCCTAATCCTGCTGGAGGTCGTTCTGGGCAATTATCTTCCAAGTTCAGTGGCGGTGGTGGCAGGGAGACCGTTTTTCTGGATCAGATAGGTTTAGTGACCGTTACATGGATGATCGTTATGATGGTGGCCGTTATGGATACCGTGACCCTATTGATAACAGAGA



gi|270474455|gb|GT856781.1|GT856781 CCYP11731.g1 CCYP Brachypodium distachyon leaf + leaf drought Brachypodium distachyon cDNA c

TCCCCACGGTCGGCGCCA
||||||||.|||| | |
AGGGGTGCTAGCCTCTAT

EST sequence (targeted fragment marked with yellow):
GTTTACCAACACCACGCCGTACACCGTCGTGGAGACCATGTCGGTGGCCAAGGCCGTCGTGCTCTTCCGCGCCGTCGCGCTCCGGCACATGCTCATCATGCCCAAGTTCCAGGGACCCGAGATATCTCCGATCGTGGGGATCTTGACGAGGCAGGACCTGAGGGCGCACAACATTCTGGGTGCGTTTCCTCACCTGGCAAACAAAAGGAAGGCTCATTGAGACTGAAGCTTGGCGGCACCAATTTTGGGAATTGCTTCACTCCATGGTTGTTGTCTTCGGAGCAAGAGAACGCTCGCTTGCTTCTGCGAGATTCACAGAATTCTTTCTTTTCTTCCTTCTTTTATGTGCAGGTAGATTCAGGATTTATTTTCTTCTCTTCTGGGAGTGTCTGAATAATTGCTGCCCCCATGTAAAATCACACCTGTCCCCTCTACACACCGATCATGATATGCAATACAGAGTTTTTTTGTCCCCC



gi|270442511|gb|GT825817.1|GT825817 CCYO8715.g1 CCYO Brachypodium distachyon flower + flower drought Brachypodium distachyon cDN

TCCCCACGGTCGGCGCCA
.||||||| ||. |||||
GGGGGTGCGAGTAGCGGT

EST sequence (targeted fragment marked with yellow):
GACAAACACAAGCATCAATTAATCAGCTCTGTCAGTTCTTCCGATACAGATCAGTGTCCCCGAACCCAAGGAGCCAACGCATCTTGAGGAGAATCTATGGCTGGTGCAGCGAAGGCGTCGTGGATGGTGGCGATGAGCGTGGGGGCCGTGGAGGCGCTCAAGGACCAGGCCGGGCTCTGCCGCTGGAACTACGCTCTGAGGTCCATCCACCGGGCAGCCAAGGCAAACGTGCAGTCAAGGGGCGGACTCTCGCAGGGCCAGAAGCTGTCTCCTGCCGCGGCGATGGCGGAGAAGACAGAGGAGGGGCTGAGGACCGTCATGTACCTCAGCTGCTGGGGTCCCAACTAGTAGCAATTCTAGTTAGCTAGTGGTGTTCTTAGCTAGCAGCAGCCGTGCATGGCTTGGCGCTGCTGGGTTGCCACCGGAGTCCGGTCTGTAAATATGGAGTACAACGGTACAATATGTACTTGGATGATGATGAAAACTTCTGCCGCGTTGAGTTCAG



gi|78001585|gb|DV469973.1|DV469973 5413_G05_M09ZR5_035 Brachypodium distachyon callus EST library Brachypodium distachyon cDNA c

TCCCCACGGTCGGCGCCA
|| |||||||||||| |
AGCGGTGCCAGCCGCAGC

EST sequence (targeted fragment marked with yellow):
CTGGTCGCCTGCAGGTACCGGTCCGGAATTCCCGGGTCGACCCACGCGTCCGCGATGCCAGCGGACGCCGCCGCCTCACCGCTGGCGCAGGCCGAGGCCGACCTCGCCGCCGGCCGCCTCCGGTCCGCGCAGAAGCACGCTCGTCGCGCCGCCAGGCTCGACCCGGACTCCCCCGCCGCCTCCCTCCTCCTCACCGCCACCTCCGTCCTCCTCGCCGACGACGACGACCCCCGCGCCACCCTCCTTCTCCTCCCCAACGCCTCCGACTCCTCCCCTTCCTCCATCCGCCGCCACTACAAGTCCCTCTCCAGATCCCTCCGCCCTTCCTCCTCCTGCTCCCCCGCCGTCTCCGCCGCCGCCAAGGAAGCGCTCCGCCGCGCCGCCGAGGCCTACGCGTCGCTGAAGGAGGATACGGAGGCGGCGCCGCCCCAGACGCTGCCGACGTTCTGGACGGCCTGCGCCGGCTGCCGCCTCCTCCACGAGTTCGACCGCCAGTACGTCGGCTTCCGCCTCACCTGCCCCTCCTGCCGCCGCAAGTTCCTCGCCTCCGAGGTGCCCCCGCCGCCGCCGCCCAAGGCCGAGGAGCCCGAGATGACGCTCGCCGAGTTGCAGCTGCAGCTCCAGCTCGGCAAGCGGAAAGCCAGAGATCATGATAATCACAAGGCGAAATCATCCACCGACGACGACGAGGAGGAAGAGAACGTGAAGATGGAGGTGGATGAGCTGGACAGTGATGACTCTGGGCAGATGGCGGTGGAGGACTCGGACTTCTACAACTTCGACGCCGACCGTGGCGAGCGGTGCTTCAAGAGAGGCCAGGTGTGGGCGTTGTACGGGG



gi|270475221|gb|GT855171.1|GT855171 CCYP10835.g1 CCYP Brachypodium distachyon leaf + leaf drought Brachypodium distachyon cDNA c

TCCCCACGGTCGGCGCCA
||||||| ||||||. ||
AGGGGTGACAGCCGTAGT

EST sequence (targeted fragment marked with yellow):
GTCGTCGTGAGAGAAGAATTAAGGGAGAAGTTTCTTGGGGATGCAAGTGGCCGAAAAAGGAAAATTGGTGCTGAAGATGACGACGATGATGCCGACAGTGGGGAGGACTCAGGAGTTGAGTCGCTCTACATTGAATGAGGAACACAATCGTATGATGTCACTGAATGTCATCTTAGGAAGCTTGGCTTCTGAAACTGGCATGGGTACCGTTTGGGAAGATTGATTTCTCATACCAGATTCAACATCATGGCTTAGTGATCTTGATTGATGAGAAAATGCTACATTGTGAGGTCAAAATTGGAGTGTGGAATCTCACGGTAAAACTGATGAGACTGTGAAATATGAATTGCGGACTGATGACCCGGATTACTACCATTCATCTGCACCAAACTGGCTGATTGCCGCGATGGAGCAAAGACATAGGCAGAACAGCTCCTTTCTGCTCCCAAGCTAATTTGTTGGAGTACCGTGAGGAGCGTCGCCTTAAGGATCTGGTGAAGGAACACCGGATCGTAGTATCTTCTGCTACTTGTGCCATTTTGCGTGCTATTACCTCTATTCGACTTTTGTTGTGAGCAAGTACAACATTTGCACAAACTTGGTTGGGTTCTGTAAATGTAAAAGCACAGTACAACGGACATACTTGGTTGCGTGAGCGCAAAAGTAGTTACGAGCTATGGTTTGTGACTATTACTTTTGAACATATATATATGTATACACCTTATATTCTTTCGAATATATTAATGGCAATGTTGCTCG



gi|78009508|gb|DV477896.1|DV477896 5312_H08_P16Z_050 Brachypodium distachyon stem plus sheath EST library Brachypodium distachyo

TCCCCACGGTCGGCGCCA
.|||| |||||| ||||
GGGGGAGCCAGCGGCGGC

EST sequence (targeted fragment marked with yellow):
CCACGCGTCCGCCCACGCGTCCGGTCAAAAACCCCTCGAAAAAACACCCCGGAGGAAGAGGAAAATAGAGGAGGGGAAAACGCAGCCGTCGTTGGGAGATGAAGCCCTCCAAGAAGAAATCGAAGAAGAAGAAGAGTCCCTCGCCGGCGGCGACCGAGGGGGCGGCGCCGACACCACCGGCGGCGGATTCCTCCCCTGGCGTTTCCTACTCGCCGGTCTCCGAAACCCTAACCCTAGCAGCAGCCGCTGCAGCGGTGGCTGCTTCGGAGACCGAATCGAGCGGCAGCAGCGGCGGCGAGGCCTCCGCGTACACGCGCGCCTTCACCTCCAGCTCGTCGGGGACCGCCTCCACCTCCTCGTTGTACGCCCCCTCGTCGTCCGACTCCGCGGCGTCCTCGTCGGCCACTGGAGACGAGCGGCAGGACCTCGCCTGGCTGCTCGAGGCCTTCGGAAGCGCCTCGATCGACCAGGTGGAGTCCGCCTACCGCGAGGCGGGCTGCGATCCCTTTCTCGCGGCCGGCATCCTGAGCTCTTCGCAAGAGCTACAGCCGCCGCAGCCCCCTCCGCCGCCAGATCTCTCGCCGTGCGCCGGATCTGCTGGAAGGAAGGCTGCTCGCAGGCCTAGGAAGCTTGCCGTGGCCGCGTCTGGCATGGTTGCGGACGTGATTGGCAAGGGCTACTCGCGGCCTGCCACTCCCGCCTG



gi|270459821|gb|GT841580.1|GT841580 CCYP3051.g1 CCYP Brachypodium distachyon leaf + leaf drought Brachypodium distachyon cDNA cl

TCCCCACGGTCGGCGCCA
.||||||| ||. |||||
GGGGGTGCGAGTAGCGGT

EST sequence (targeted fragment marked with yellow):
GATCAGTGTCCCCGAACCCAAGGAGCCAACGCATCTTGAGGAGAATCTATGACTGGTGCAGCGAAGGCGTCGTGGATGGTGGCGATGAGCGTGGGGGCCGTGGAGGCGCTCAAGGACCAGGCCGGGCTCTGCCGCTGGAACTACGCTTTGAGGTCCATCCCCCGGGCAGCCAAGGCAAACGTGCAGTCAAGGGGCGGACTCTCGCAGGGCCAGAAGCTGTCTCCTGCCGCGGCGATGGCGGAGAAGACAGAGGAGGGGCTGAGGACCGTCATGTACCTCAGCTGCTGGGGTCCCAACTAGTAGCAATTCTAGTTAGCTAGTGGTGTTTTTAGCTAGCAGCAGCCGTGCATGGCTTGGCGCTGCTGGGTTGCCACCGGAGTCCGGTCTGTAAATATGGAGTACAACGGTGCAATATGTACTTGGATGATGATGAAAACTTTTGCCGCGCTGAGTTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC



gi|270444795|gb|GT824945.1|GT824945 CCYO828.b1 CCYO Brachypodium distachyon flower + flower drought Brachypodium distachyon cDNA

TCCCCACGGTCGGCGCCA
.| ||||||||. |||||
GGAGGTGCCAGTGGCGGT

EST sequence (targeted fragment marked with yellow):
TAAGGACCTGCAGGCTATGCAACAACTTTCCACCAAGAAAGGAAATGATGAGGTTTTCATCAAACTGGGTTCTGATAAGGATGCTCTGAAGAAGAAAGAAAATGCTGAACGTGATGAGCGTGCTAAGAAGTCTGTGAGCATCAATGAGTTCTTGAAGCCTGCTGAAGGAGAAAGGTTCTATGGTGGCAGAGGCCGTGGCAGGGGACGTGGCGGTGACCGTGGAGGCTTCAGGGGTGGAGCTGGTGGTGGTGGGGGGGGGGGGCCCACCTGCTGCTCCAGCAATTCAAGACCAGAACCAGTTCCCAACTCTTGGTGGGAAGTGAAAAAAAAATCTGCATGTACCATCTCAATTCTAAAGTATCTTTACGATTTCGTCTACTGGCAACTTTAATTTTGTTCTCCCATATAATTTCAGTCGTACTTCTATTCAAGACAAATAATTGTGCTGTATCTGGATTATTCACCCCTTGTGTCAGTCGACTTTGTAAATCCGAGTTGTTCGTCACTTGTGCG



gi|78017118|gb|DV485505.1|DV485505 5374_C09_F18Z_075 Brachypodium distachyon leaf EST library Brachypodium distachyon cDNA clone

TCCCCACGGTCGGCGCCA
||||||||.|| || ||
AGGGGTGCTAGAAGCAGT

EST sequence (targeted fragment marked with yellow):
CCACGCGTCCGGCTTGGGGAAGAAGAAGCAGCAAAGCTCCCCCGCACCAGCCTCCTCCTGCGCCGCTCGCCGCCGATCCGGGCAGCCAGCGAATATGCATTCCACCAACCTGCTCCTCGAGGAGCCCATCCGGATGGTCTCCATCCTCGAGCCATCCAAGCCCAACTTCTTCCCGGCGATGACGAAGATCGTGGGGACGCTGGGTCCCAAGTCGCGCTCCGTGGAGGACATCTCCGCCTGCCTCAAGGCCGGCATGTCTGTGGCCCGTTTTGATTTCTCGTGGGGGGACGCCGCGTACCACCAGGAGACGCTCGATAACCTCAAGCTGGCCATCAAGGCCACCAAGAAGCTCTGCGCAGTTATGCTCGACACCGTTGGCCCAGAGTTGCAAGTGGTGAACAAGAGCGAAGTCACAATCTCGCTTGAAGAGAACGAGTCTGTTGTTCTCACCCCTCATCAGGGCCAGGAGGCTTCGTCCAAAGTGCTGCCCATCAACTTCTCCGGACTCGCCAAGGCTTTGAAGCCAGGAGACACAATATTTGTGGGGCAATATTTGTT



gi|270478928|gb|GT859136.1|GT859136 CCYP13067.g1 CCYP Brachypodium distachyon leaf + leaf drought Brachypodium distachyon cDNA c

TCCCCACGGTCGGCGCCA
.| ||||||||. |||||
GGAGGTGCCAGTGGCGGT

EST sequence (targeted fragment marked with yellow):
AACGAGGAAGAAGAAAAAGGAAGAAGATAAGGAGATGACCCTTGAGGAATTTGAGAAAGTATTGGAGGAGAAGCGGAAAGCGCTTCTTGCTTTGAAGTCTGAAGAGAGGGAAGGTTGAAATTGATAAGGACCTGCAGGCTATGCAACAACTTTCCACCAAGAAAGGAAATGATGAGGTTTTCATCAAACTGGGTTCTGATAAGGATGCTCTGAAGAAGAAAGAAAATGCTGAACGTGATGAGCGTGCTAAGAAGTCTGTGAGCATCAATGAGTTCTTGAAGCCTGCTGAAGGAGAAAGGTTCTATGGTGGCAGAGGCCGCGGCAGGGGACGTGGCGGTGACCGTGGAGGCTTCAGGGGTGGAGCTGGTGGTGGTGGTTATCGTGGCCCCCCTGCTGCTCCAGCAATTCAAGACCAGAACCAGTTCCCAACTCTTGGTGGGAAGTGAAAAAAAAATCTGCATGTACCATCTCAATTCTAAAGTATCTTTACGATTTCGTCTACTGGCAACTTTAATTTTGTTCTCCCATATAATTTCAGTCGTACTTCTATTCAAGACAAATAATTGTGCTGTATCTGGATTATTCCCCCCTTGTGTCAGTCGACTTTGTAAATCCGAGTTGTTCGTCACTTGTGAGAATTTTGTAGTGCTATTTTCTTTACCCTCC



gi|78005079|gb|DV473467.1|DV473467 5456_H03_O06ZE5_017 Brachypodium distachyon developing spike EST library Brachypodium distach

TCCCCACGGTCGGCGCCA
|||||| ||||||||||
CGGGGTGGCAGCCGCGGT

EST sequence (targeted fragment marked with yellow):
CCACGCGTCCGCTGTCTCCAACCACTGCCCCTTCCTCCGCCCCGCCCTTGGTGTCCTCCTGTGCGCCCGCCGCCCCACGCCTCGCGACGCCGTCGCCCCCCCCCCCCTGGCCCCCGCGCAGCCATGGCGCCGACGGTGGGGCTGAAGCGGTCCGGCACGACGCAAACGATCGCGGTGCCGCCGCCGCCGCAGGACGCGCGGTTCGCGGTGCGCGAGGCCGTGCGGTCCACGATCGCGACGCCGCCGCCCGCCGAGGCGCCGGGTGCTCCCGCGAGGGTGGCCCCTGCGCCCGCACTGGAGGGGTTCCTGTGCCTGGAGGAGGTGGACGGGAGGCGGTGGAAATACGTGGTGGATGAAGCCCCGGGGAAAGGGA