| mature miRNA: TCCGATAAAGCTTCCCCCTGC species: Chlamydomonas reinhardtii database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|161799983|gb|FC087558.1|FC087558 CACW1847.rev CACW Chlamydomonas reinhardtii Strain S1D2 normal Chlamydomonas reinhardtii cDN TCCGATAAAGCTTCCCCCTGC EST sequence (targeted fragment marked with yellow): CAAGGCCGGCAAGATGTATAGCGCTTTGGGGAAGCGCCAATGGTGGGGAGAAGCTTAATCGGAGGGAGGAGCGGAGCTGGAGCCACGCGGCAAGCTCGAGAGGAGGCGAGGAACGCGCACGGTCGCACAGCTGGATCGACAGGGGAGCTGCTGGACCAGCAGTCGCCTGATATGGTTCTTGCGGCGCTGACGGACCCAGGCTGAAAGAAAGACTGTGGCGGCAGCTTATGATGGTTTGCGTGCATGACTGTTGGTAAACGCATAGGGGCTGTGCGGCTGACAGCGCTACGGGTCATTTGCAGCGTTTGTTACACGCTCTGTATGTGCCCCATGCGCACAGAAGTCAAGTAGTCATGAGGGGTGATTGTTTGCTGCTTTTAAGCACTATTAAACCGGGAACCGCAGATTGAGCCAAAATGGTACGTCCCTGACGAAAGGCCCACATGGTGAACATGTGCAGTGATGAGGGCTCCCGTACTCGTGTGTTGGCACAAGGCACATTGCCGAAGGGTTGGTGGCTGAAGATAATGTCCAATAAAGTTGCTGCGCAAGCGGTGCTGGGACAGCATCCTCTCTCTCGGGTCGCCAGGAGCAGGTGCTGCTCAGCGCGCAACGAGGGCGAGGCAGGCCTGGATGGGTGGGCATATCTTAAGCCGAAATGCGCAGGCGTGGGGCGCCGGGTTTCTACGGCTGCAGAAGTTGTTAGACCGCATGATTC | |||||||||
gi|15704885|gb|BI729190.1|BI729190 1031103F07.y2 C. reinhardtii CC-1690, Stress II (normalized), Lambda Zap II Chlamydomonas rei TCCGATAAAGCTTCCCCCTGC EST sequence (targeted fragment marked with yellow): GCACGAGGCAGCGCTTCGCATTCAGGCCCGGCATGATGCGGACGGGGAGGAGGAGGTGCCTGACGAGGGCGAGGCGACCATGTGGGATGAGGCCAAGTTCTTTGAGGCATACCCCGTAATCTACTGGGGCCGCTTCAGCGGCTCGCGGGACTGGTTTGACGCATAGAGCAAGGAGGTGGAGGCCCTGTACGAGAGCGCTGGGCTATAGCATGCAATGGGCAGTACTGTTCAGAGCGTGCGGATGCTGAAGGAGATTTACGTAGGCAGCGTGAAGCTTTCTCGGGGCTTGTGGTTCATGTGCCGTGCGGCGAACGACCTGCCAGACTGGTGGTTTGGGCGTGTTGTTGAGG | |||||||||