| mature miRNA: TCCTAAATACTTGTTGTTGGG species: Hordeum vulgare database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|24294864|gb|CA017520.1|CA017520 HV05H07r HV Hordeum vulgare subsp. vulgare cDNA clone HV05H07 5-PRIME, mRNA sequence TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): CGGCACGAGGCGAGGCTTCAATTGCATTGATGTAGTACAAGGGAGTGCATGTTGTTGCTTCAGCAGTTGATTCATGTCATGGCAAGTGGGCAACATTACTAAATATATGACACTAACCCGCAGATGTTTTTCTCTAGGATCCTAAGTGCTAAATTTTCACATACATGTATTTAATAATTATAGTATTTATATATCCAAGGTTGCTAGCCCGTGCAGCTGCACGGGTGTACGACTAGTATTTGTAGTTGGGGGAACTTGTACTAGTTTCCCTCAACTACAAGTATTTCGGTACAGAGGGAGTAGATCACAAGACTCATTATGCCCCATGTCTACACTACCATCAGAGTCAGCTTGCGCTACTTCCTTATCTATATTTTGTAGCAGCAGCTTCCTGAGGTGACTTGGTATTCTCACAAATGATTTATTGTAAATACGGACATATATCCACCTGACTCTCAAACTACTCAAAATGTGAAGGTGCAAGCTTGTAGTCACCTATT | |||||||||
gi|94359878|gb|BY873717.1|BY873717 BY873717 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bast73e05 3', mRNA sequ TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): TAGACGAAGGGGAAGGAAGCCCCCTCGGCCCCTACCGCAGAGGACACTGCCACATTGGTATCCATGAGTCCTCGCCGGCAGCTTCAGGAGCGTCACCGCCTTTCTGCTGATCACTCTGGGAGTTGTGTGGACTCGTAGATGGTTGGAGACCATTTGGGGGCATCCAAGCTGTATATTAGCCCCAAGAAATTTGCGAGGGTTTGGAGTTTTTCATAAGAACTATTCCCTCCGTACCACAATACTTGTTGTTGCAGAAAACTAGTCTAGTTCTCCCCAACAACAAGTATTTAGGAACAGGGGGAGTAGTGAACTACCCGTGCCGAAGGGAGCCCCGGCATAGGTTGGTCAGAGCTCTTGGGAGAAGAAGGTGAGACAACATTTGTTATTGAGGGTATC | |||||||||
gi|18215420|gb|AV919641.1|AV919641 AV919641 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): CGGAGTCACCTCCTTCACCGAGCTGTCGCCGCCTAGACCATCCCTCCAATCCATCCTTTTTCTCCGGCGCCGGCAACCCAACCTGCACAAGTACCAAAACATGTCAATCTCTGCCTCGCCTCCGCCATCGACACGCACGGCCGTCTCTGACTTACAACCGTGCTTGCTCATGCTAAAATCGACTGAAGTCGACATTTTTCAGTTGCCCGAGAAATAGCAAACGCGCGTTAATCATACACGCGCATCTGTCACATATGAGGACGAAACAACGTTCACTACACGGCACACACTGTGTACACTATACACCACACATGGCATGGGCATGAGCAGCTGCTTGCACGACTGTGACGTGTACGAGCGTGACGGCGAGCGACCACGCGACTCTGCAGTTACGCCGAGAAAGATACAGGCAACAGTGCGCATTCATTTCTAGCCGGAGGTTAGTGGTGACGGGATCAGTCAATGCCCTGCATGGCCTGCATGGCCCGCCTATAACAGTCGACGTGTCCTGACAGTCGTGTAGTACCCGCCAGCCGGTGTTGGGTGTCTGCTCTTAACTGAACTTGATGGATAACTAACTACTCCTATCTATACCTTAATACTTGTTATTGAGAAGAACTAGTTTAATTTTACTCCAACAAGAAGTATTTAGGAACAGATGAAGTACTAGCCAAAACTGTATGTA | |||||||||
gi|13186592|gb|BE193448.2|BE193448 HVSMEh0081A16f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009 (5 to 45 DAP) Hordeum vu TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): AATCTTTGGATTTTGAGGAACACACCATGGAGATCAGGCCAATGGTAGCCCTGCGTGCCGCCCTAGTAGGCGGGGTAGCTGCATTCGCAAAGATCGCTGGGGCGATGAAAGCTGCAGGCGGCGTGAAGGTTGGCGCTGCGGCTGCAGCCATGACAGCTGCAGCGACGGCCGCTGTATCCGGAAAAGACGCTGGTAATGATAACCAAAAGCCGGGGGCAAAATGATACGTGCCACGGATTTGGTGGAGAGGCAGTGTTCTAAAATGCTTCTCCATAGTGTAGACCAGCATTTCAGCAGTTTATCAGTGCTGAAGAGCTGCGGAAGCTAATTGTGGCCTTCAGGAGGAGACCGCATTCACAATAAATAAGTTTTGCCAGCGCAATTCCCATGATACATGTGTTTTTTATAAACTCGGGGTATAAGAATTATGATGCCCTGATTTTTTGTTCCTGTTGATGATTTGCTCCCATGACCATGATACATTATATCAGCGCTGAAATGCCCTGAGACTGTAGTGTCAGGCACAAAATACCCGGACTGTTCCGGGTCTACCTCCCTCTGTTCCTAAATACTTGTAGTCGAGGAAAACTACATTAGTTCTTCTGAACTACAAGTATTTAGGTATAAAGATAGTAGTAAGCACATGCCTTTTTCCACAATTTGCTCCCGAACTAATGCTTGGACTGAATCTGTCTTGGGCTATGTGGCTGGGTTTTAACACTTGGCAATGATAAATTCCTTGAGACG | |||||||||
gi|161460846|gb|EX592550.1|EX592550 HDP37C07w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP37C07, mRNA sequence TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): GGCGGAGAAGTGCTGAGTTCTCCGTGAACACTTGAACAGACTCAGCTGAGAGAGCAGTGAGCAGGGGAAAGAAAGGAACAAGGGGAAAAGATAGTGGAGCAGTAGGTTAATTAGCAGGGCAGCCATGGGATTCTGCTGTGGGCCCTCGGATGTCAAGGTGCTCCCAAATAGCATCTCCTCCTTGTCGCCGTCCTCCTCCTCTTCCTCATCGACTTCTGCTAAAGATTCTGGCGATGGTGGCAAGAAGAAACAGCAGCAAGGTGTGAAGAAGGAGCAGAGGAGGGAGAAGAAGAAGAGCAAACTTGACCAGGCCGCCATGTCGATGCCCCGCTTCCCCTTCCATTCTCGGCCTGGTCTCATGTAATACTAGCTTACAGCCGAGGTTGGAGCTTAGGATATATAATATACTCCCTCTCTATCACAATACTTATAGTTGTGGGTACCTGTGTTAATATTTCTAACAATAAGTATTTAGATACGGAGGAAGTATATAGCTTCGGTTGCTGGGTTAAAGTTTTGAAATTCCTAGTGTCGTCACATGTTCTATTATTCAT | |||||||||
gi|217051139|gb|GH216782.1|GH216782 HVSMEg0002E22f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVS TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): AACAACAAGTATTTAGGAACGGAGGGAGTAGCTAGCTAGCTTGATAGTAGTTTTATCATCTTCTCCGGCCCTCTTTGGTTAGTTGTGTTCATTCCATTCTTGTGTGGCGAGATTATAACTGCCCGGCGTGTGTGAGTGACTGAGTGGTCGGTGTGACCGTGGCGTTGGTGCAAGTGTTTTTTTTGAAAGGAGGTGAGCACATGGAAAGTTGGAAAGGCGGCCAACAAGAGAGGGAAAAAAGGAATGAGTTGTGGTGAAGCAAAGCAATGTATGCCAAGCAAAGAGATGGCGAGATTGGTGGTGTGCATGACGATCGACGGAATGATTTGATCAACGATCCCTTTTGCGCAAAAAAAAAAAAAAAAA | |||||||||
gi|30067117|gb|CB865141.1|CB865141 HD08J07w HD Hordeum vulgare cDNA clone HD08J07 3-PRIME, mRNA sequence TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): CTTTTTTTTAGCAGCGAATGCATTCATTCTTCATATATGGAATTGCGAGCTACACATTTCATCACAAACTATCATGAGTCTGTACAGCAATCACAGGAAACCACCTTTCTACCACGGTATATGTACATTATAAGTGTATAATTGGGTACTACTCCCTCTGTACCATAATATTTGTTGCCGGGGAGAGTTCTCCCCAACAACAAGTATTTAGGAACAGAGGGAGTATGATGGAATACCCGAAATAATAGCATAATTCTTATTCACCTAAGGCTCGTTCAAGCACTACTAACCCTGTGTGAATAGGAAGGGACTTTGGTATATGGTACAATAGCTGAAATAGTGATTACGTTGCTTCTTCACCTCTGGTTTAAGCACTAAAACCCTTGTGTGTGGCACTCCACGGGTTGGTTGGGAAGCTCGTGC | |||||||||
gi|21269964|gb|BQ462184.1|BQ462184 HD02B20r HD Hordeum vulgare cDNA clone HD02B20 5-PRIME, mRNA sequence TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): CGGCACGAGGGAGCACCGGTCCTCTTTCAGCGGGCATGGTCAGGAACATAAATTTCTCTCTTCTCTTGCGAGCTCTCTCTGTTATACTTATATCTCTGTATGTATATATGGCCTAACTTTCCTCTCCATCTCGTTTTTTCTGCAGCTAGCACGAAGTAGCGCTGATGGTAGCACCTAGCCAGCGAGGAGAAGTAGCAGCACACTCACTTTCCCATAATTTTCTTTAGGAAAAACCGTGCTGTACAAGTGTGCATAGCAACCAATCTGTGTTCTTTGCGTCTGTGATTTGGTTGAGTGGACGAGAGTTAGAATTATCTGCTATGCTTATACTTCCTCCGTACCACAATACTTGTTGTTGGAAAGAATTAGTCTAGTTCTCCCCAACAACAAGTATTTAGGAACAGAGGGAGTAGATGAGAAGGAGACTGTGTAATCTTTTTATGGGGATTGAGCATGAGTC | |||||||||
gi|161469464|gb|EX582409.1|EX582409 HDP13O18w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP13O18, mRNA sequence TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): GGGGGAGAACCAGGACGAGGTATATCTCCCGGAGTGGAACGAGAGAGTAATCAGCGGGCATGATTGGGAGCTTACTTTGGAAATGACAGCAGAAGACAAGGAGAAGATGATGCAGCTGACTATTGTGGGGCTGTGGTCCATCCAGTGGAACCCAAAGAACCGACCTTCAATGACAAAGGTGGTAAACATGTTAACTGGGAGGCTGCAGAACCTGCAGATTCCCCCCAAGCCCTTTGTGTCGTCTGACAATCGCCCAATGCCCCAAAACACGACCAACACATGAATATGCACAGTTTTTTCGTGTATTATTATTACATACACGTATGAGGGAACTTAACCCACATGTGAAATGCCCTGTCACCTGATCTGTACCTTTACTATATTGTAAAATTCTCCCCAACTATAAGTATTTAGGTACAGAGGGAGTACATGGGTCGCCGGATCTGTACCCTATCATGTTTGTAATGCTATTAATTACTAGAAGCATATGGCACTGGATTTGTCATTGCT | |||||||||
gi|16316623|gb|AW982217.3|AW982217 HVSMEg0002E22f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow ant TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): AACAACAAGTATTTAGGAACGGAGGGAGTAGCTAGCTAGCTTGATAGTAGTTTTATCATCTTCTCCGGCCCTCTTTGGTTAGTTGTGTTCATTCCATTCTTGTGTGGCGAGATTATAACTGCCCGGCGTGTGTGAGTGACTGAGTGGTCGGTGTGACCGTGGCGTTGGTGCAAGTGTAGTGTGTGAAAGGAGGTGAGCACATGGAAAGTTGGAAAGGCGGCCAACAAGAGAGGGAAAAAAGGAATGAGTTGTGGTGAAGCAAAGCAATGTATGCCAAGCAAAGAGATGGCGAGATTGGTGGTGTGCATGACGATCGACGGAATGATTTGATCAACGATCCCTTTTGCGCAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|161470926|gb|EX595108.1|EX595108 HDP28F01T HDP Hordeum vulgare subsp. vulgare cDNA clone HDP28F01, mRNA sequence TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): ATGCAGCTGCCATTTTTTTCCATGAATATACCTCCTACCTCCTCCGTTCCTAAATATTTGTCTTTTTAGAGATTCAACTATAAACTATATACTGACTAAAATGAATGAACTTACATTCTAAATTATCTCTATATACATCTGTATGTAGTCTACGGTGGAATCTCTTGAAAGACAAGTATTTAGGAACGGAGGGAGTACATATTAAGCAGAATGGCCAAAGAAGCAAAATCTCTACAAAGTACAATCCCAATCCTAATACTGAACTGCAATGCTTCAGAAAGTGAAAAAATATAGAGATACATCTCCAAGTAGATCATGCTTCGCCGGTCATATCTTCGACAGTCGGTTCAGCACTGCTTATTTCACATGCTTCAACAACACATACAGGCGCATGTGTTTGTAACAACACATAACATACCCATGGCTGTTAATTGCACCATCTGATCTGACGGACAACAGCAAATGTCATGAGGCTCAGCCTGTCATGCACACTATACATACATCATCACCGTTACTCTTTCTTC | |||||||||
gi|217057921|gb|GH225396.1|GH225396 HVSMEm0001L03r2 Hordeum vulgare green seedling (Blumeria infected) cDNA library HVSMEm (HVcD TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTAAAAAAGCAGCGAATGCATTCATTCTTCATATATGGAATTGCGAGCTACACATTTCATCACAAACTATCATGAGTCTGTACAGCAATCACAGGAAACCACCTTTCTACCACGGTATATGTACATTATAAGTGTATAATTTGGTACTACTCCCTCTGTACCATAATATTTGTTGCCGGGGAGAGTTCTCCCCAACAACAAGTATTTAGGAACAGAGGGAGTATGATGGAATAGCCGAAATAATAGCATAATTCTTATTCACCTAAGGCTCGTTCAAGCACTACTAACCCTGTGTGAATAGGAAGGGACTTTGGTATATGGTACAATAGCTGAGATAGTGATTACGTTGCTTCTTCACCTCTGGTTTAAGCACTAAAACCCTTGTGTGTGGCACTCCACGGGTTGGTTGGGAAGCTCGTGCACGCCTGAGCAGCAACCTTTGCCATCGCTTCAGGAACAATGCCGGCATTACACATGTTTGCAAAGGACCGCATGTGCTTCATTCCATACTGCGCCAACGAGCCACATTGGGATTCAAAAGTACGCACCGTAGACTTGAGACAACTCCAGTCATCCACAAGAGGCTCACCAGCTGGGCGAACAGTCTTT | |||||||||
gi|161415750|gb|EX575758.1|EX575758 HDP14F03w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP14F03, mRNA sequence TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): GGAGGAAAGATAGTGGAGCAGTAAGTTAATTAGCAGGGCAGCCATGGGATTCTGCTGTGGGCCTTCGGATGTCAAGGTGCTCCCAAATAGCATCTCCTCCTTGTCGCCGTCCTCCTCCTCTTCCTCATCGGCTTCTGCTAAAGATTCTGGCGATGGTGGCAAGAAGAAACAGCAGCAAGGTGTGAAGAAGGAGCAGAGGAGGGAGAAGAAGAGCAAACTTGACCAGGCCGCCATGTCGATGCCCCGCTTCCCCTTCCATTCTCGGCCTGGTCTCATTTAATACTAGCTTACAGCCGAGGTTGGAGCTTAGGATATATAATATACTCCCTCTCTATCACAATACTTATAGTCGTGGGTACCTGTGTTAATATTTCTAACAATAAGTATTTAGATACGGAGGAAGTATATAGCTTCGGTTGCTGGGTTAAAGTTTTGAAATTCCTAGTGTCGTCACATGTTCTATTATTCATCGATTGGTCTGTTGTATTCTATGATCTAAATCATGGGTGTTCTTTTGTTGATTTACAAGGGATTATATATGTTC | |||||||||
gi|21139525|gb|BJ461009.1|BJ461009 BJ461009 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vu TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): GGGACATGAATGGGAGCTTACTTCAGAAATGACAGCAGAAGAAAAAGAAAAGATGAGGCAGCTGACTATTGTGGCCCTGTGGTGTATCCAGTGGAACCCGAAGAATCGGCCATCAATGACAAAGGTGGTAAACATGTTAACTGGGAGGTTGCAGAACCTGCAGATTCCCCCCAAGCCCTTTGTGTCGTCTGACAATCGCCCAATGCCCCAAAACACGACCAACACATGAATATGCACAGTTTTTTCGTGTATTATTATTACATACACGTATGAGGGAACTTAACCCACATGTGAAATGCCCTGTCACCTGATCTGTACCTTTACTATATTGTAAAATTCTCCCCAACTATAAGTATTTAGGTACGGGAGTACAGGGTCGCCGGA | |||||||||
gi|21132043|gb|BJ453463.1|BJ453463 BJ453463 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vu TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): GGGACATGAATGGGAGCTTACTTCAGAAATGACAGCAGAAGAAAAAGAAAAGATGAGGCAGCTGACTATTGTGGCCCTGTGGTGTATCCAGTGGAACCCGAAGAATCGGCCATCAATGACAAAGGTGGTAAACATGTTAACTGGGAGGTTGCAGAACCTGCAGATTCCCCCCAAGCCCTTTGTGTCGTCTGACAATCGCCCAATGCCCCAAAACACGACCAACACATGAATATGCACAGTTTTTTCGTGTATTATTATTACATACACGTATGAGGGAACTTAACCCACATGTGAAATGCCCTGTCACCTGATCTGTACCTTTACTATATTGTAAAATTCTCCCCAACTATAAGTATTTAGGTACGGGAGTACATGGGTCGCCGGATCTGTACCTAAAAAAAAAA | |||||||||
gi|217052925|gb|GH218878.1|GH218878 HVSMEg0016H13f2 Hordeum vulgare pre-anthesis spike (white to yellow anther) cDNA library HVS TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): AACAGTTCTGCTCAGATACAGCACGTCAATGGGCTTCCAAAGGACTGGCAGGAGAAGAGGAGCAGAGCTGAACAACTCTGCTCAAGGTCACCTTTCTACAACAATATGACAAAGCGCTACGAACTAGATTTCATAGAAAGGGTAGGGAGGATGGGATACAAGGTGCAGACATCAGTGAAGAACTTCCAGATGACTTTGGAGGAGAACGGAAGGCAGACGATCTTGCAGCTCGGTAGGGTCGGGAAGTCCAAGTACATAATGGATTTCAGATACCCGTTGACTGGCTACCAAGCATTCTGCATTTGCTTGGCGTCGATGGACTCCAAGCTGTGCTGCACACTGTGACTGAGATGTACTCCCTCTGGATCACAATACTTATAGTTCGGGGTACTTGTATTAGTGTTTTCCAACAACAAGTATTTAGGTACAGAGGAAGTAGATGCGACGGAGTTTTGTTTAGCCGGAATGTTGTTTTTTGTGCTGCACCCTGTGGTCTCGATTTTTATGTGCATGCAGTCTTCTCGCCTCGAG | |||||||||
gi|40954000|gb|CK568426.1|CK568426 HO09P23w HO Hordeum vulgare cDNA clone HO09P23 3-PRIME, mRNA sequence TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): CTAAAATTGCCTGGTTAAAGAGGACATATTATCGTTATTCCAATAGTAATATAATTAAACGTCTCGTCACAAAGAAAAGTATTTAGGAAATTTGTTCAAATCAGAGTAGCCCTCGCAGCCTCCCCTCCACCTCCTTTGAGAACTTCTTCCGTCTGCACCCTACCTTTTCCAATAGTATTGTCACCCACACCCATTCGACGAGCAATATATCGTTGCGCTAATACGCCAGTGACTAAACTCAATATTTCTTCTACCCATTCTGCGACCCATTCCCTTGGATCTATGCCTCCGTCTTCAATAATCTGTGCTATTTCTTCTGGTAATATATTTGAGTTATCTAGGCTTTTAACATCCTTTCTTTCGAGGAAAGACTCGGAGGGTATAGTCTGAGTTGGGTTAGATGCGTCGAGCCATTTAATCCATTGAGCTGGTAAGGATTGAGAAACTGTGTGAAATTTGATTCCGTGTACAGGGTCGAGAAGGTATATTGCAAACGATATTAGTTCATCAGCCCCCTCATTTTCTATGGAAATATTATCATTTTCTTGATCTTTTTTAGAGGCTTGGAAATAATCAGGGCAATCATAATGAATAATAGCCTGAACAGCAAAGAAGATATCACTGCGCCGAAC | |||||||||
gi|166069722|gb|FD523910.1|FD523910 RUS69C08w HF Hordeum vulgare subsp. vulgare cDNA clone HF15J01, mRNA sequence TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): AGAGAAAAAATCTCAAATTCTCTGCAGTTGGGGCAAGATTATATACATACATAGCGTTCCTGTCTCTACATCAGAATTTAGTGGTGTTGTTCCAAACGAAACTTTAGTCTAAATGTCTAATAGCTACAGAAGAATTTAGTAGTGCTGTGCCAAACGAAACTTCGTCAGCATTTAATAGGCTCCGTTGGCAAAAATAGTCACTGGAACTTCTACAAAGAAATGAAATATGCGGTTTCTACAACATTTCCCTCGGAGAGCGGCCTGACAGATAAAATGTGGCTCTCTGCGGGTAGCCGTTGCTCATGTTGGTCGATGCTCCGAATTTGCGTTGCGGCAGCTCACTGGAGTGTGCAACTGCAGCCGTCCAGTGCACAGGCCATAGTCCGGTGGGGCTGTCTATCCTTGCTCCAACTTTCCAGCCCCACAGATGCATCTTGAGCTGATCCATTTCATGTTCCTAGTCGCACATACTCCCTATGTACCTAAATAGGTCTAGTTCTCCCCACTAACTACAAGTATTTAGGTACAGAGGGAGTAACAGCGTATTCTCATCCGGGCAGGTGCAAATGCATGCATCCATATGCACCAACACGCCGATGAGTTACACCGCCATACGTACACCTTCTACGACGTACGTGCAAAGAAGTCGTTAACTGCAAGTGACGCATCGCCATGTGCAACCGCATTCTCTGGCT | |||||||||
gi|12027937|gb|AL501722.1|AL501722 AL501722 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare cDNA clone HW05C10 3', mR TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): GTCAACAACTAATGTTGGCTAGTAGTCTAGTACTACTACCTACTCCCTCTGTATCATAATATTTGTTGTTGGAGAGAACTAGTCTAGTTCTCCCCAACAACAAGTATTTAAGAACAGAGGAAGTGGTAGTAATGCATGGTGGTTGGCTGGCTCCATGGCGGGATTGCCCGGTTGAGAAAATGTAACGCTTTCCTGGCGATCACTTTTTAATAAGTGTCATTGTTGGTTTCGTCACGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|21135239|gb|BJ456685.1|BJ456685 BJ456685 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vu TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): GCAAATGGCCACCTCAAGGATCAGTTCATCGAAGCATTGGNAGATGCAAGCTGAATAACTTATTTCGTCAAGTAGAATGAAAGAATGTACGANGGCCCCACCAATAAGTATTTAAGGGCTAATTTTCGTGTAGTTCTACGTNACGCTATGCATTTTTGCAAACATGGTGATGTAATACATGTCGATATATGCTCGTTTATNACCANCAAGNATTCAGC | |||||||||
gi|24240671|gb|BU989725.1|BU989725 HF22I12r HF Hordeum vulgare subsp. vulgare cDNA clone HF22I12 5-PRIME, mRNA sequence TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): CGGCACGAGGATGACTAGCCATTGAGTCATGAGACAAGAAAAACCTAGCAACGCTAATTTTCGGTCCAAGATAGTACACCGGTACTGATCATCTCTTTTAGTTGAGTTTGCCCCGGCCCCAAGTCCCTCCCTCCGCTTCCGGGAAGAGATCGACGGCAACTTCAGATATATCGCTTCGCCGGAGAAAGGAGGAGCACCCAGCATGGCCGGGAAAGGCTATATATATACCGGATTGATATCTGTTAGTTTAAATTTGAGGTTTCTTTCTTCTTGATTCCTATATATGTTTTGCCGTCCCATGCATATGCATTCTACTCTTTCTGTACCATAAATTTGTTGGTGGGGGAGAACTAGATTAGTTCTCCCAACAACAAGTATTTAGGAACGGAGGGAGTAGCTAGCTAGCTTGATAGTAGTTTTATCATCTTCTCCGGCCCTCTTTGGTTAGTTGTGTTCATTCCATTCTTGTGTGGCGAGATTATAACTGCCCGGCGTGTGTGAGTGACTGAGTGGTCGGTGTGACCGTGGCGTTGGTGCAAGTGTAGTGTGTGAAAGGAGGTGAGCACATGGAAAGTTGGAAAGGC | |||||||||
gi|21801987|gb|BQ660854.1|BQ660854 HI05M14u HI Hordeum vulgare subsp. vulgare cDNA clone HI05M14 3-PRIME, mRNA sequence TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): ACTACTCCCTCCGTTCATAAATACTTAGTTGGGAAGAACTAGACTAGTTCTCCCCGACTACAAGTATTTAGGTACATATGGAGTATAACTCAAGTCTCAAAAGAGGAAACACAAAATTTTCAAAATAACTACTAATAAGGTTACAAATACATTACACTTAACATCATGATCGCATTTGATTTTTCTAGTTGCAATACTAGTGTCGTTTGATGCTGAAATACACTATGCCAGACATTTGACCATGTAAGGCCCCTCAAGTTCGTAGCCCAGCTTGCGGTAGTAGTGGCGGGTTCCAACTCCTGAGATGACGGCCAGTTTCTTTGATCGATGCTCCTTACGGGCAATTCTTTCTGCTTCTTCCATCAGGAGTGTCCCATACCCCTGGTGTTGAAGTTTCTCCGCATCACGACCATGCACAGGG | |||||||||
gi|16301692|gb|BI955393.1|BI955393 HVSMEm0022P05f Hordeum vulgare green seedling EST library HVcDNA0014 (Blumeria infected) Hord TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): TTTTGATAGATATGCCATTTTCATAGGCCCCATCAACCGAACAATCTCATGTCATGGGCACAAAAGTTTCTTATTTGCTTCTCTCCTGCTCCCTCTGTACCTCCCCAACTACAAATATTTAGGTCCAGAAGCTCCCCAACTACAAGTACTTAGGTACAGAAGGAATAGACAACAAGAAACAAACACATATACCAAACTAAAAAGCTCAAAATACCTAGATGAGCTCTGTCCTACCATAATAACTTCAGGGCGCAGATTCCCTTATAAATAATAAGAATGGGTAAGTTTGCAGTGGTCTAATGAACTGTTCGTCGCCATCATCGTCTCATGCCCCACCACTCTTTAGCTTCGCTTCCTCCCTGTCAATCTCCTCGAGCGCGTTCCACAGTTTCTGGTCTTCATAGTCATTGACGATCAATGCGGCCCCGGCTTCCTCTNAGGACTTCTCCGGGTTCCTCGTCAACACGGCGACGACGGGCATNCCCGCAGCAACACCCGCACGCGTTCCTGAAGCAGAGTCCTCGAAGATAAAGTGTGTGCGGCAGATACTTCGAGCTTCTTGAGGGCCTCANGTATGGGAAAGGTGCCGGCTTTGGCTCTTGCATTCCCTCCAACTTTACCGGCTGGAAGAATCTGATAAACCAAAAATTTGACATCACCTTTGCTGGATCCCTGGGCATGG | |||||||||
gi|94337628|gb|BY869279.1|BY869279 BY869279 Seminal root Hordeum vulgare subsp. vulgare cDNA clone bart53g04 3', mRNA sequence TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): CACTGAACCAGTGCGCAACGGCCGGCTGGATTAAAAGACCGGTGTCCTCCTCCGATGTCAGATAAATCTTGAGCACGTCAGCTGGATTAATTGGCTAGTTTGCCTCGACTTCTTGTCGAATTCAGCGCAAAATGTTGTACTCCCTCTGTACCATAATACTTGTTGTTGGAGAGAACTAGTCTAGTTTTCCCCAACAACAAGTATTTAGGAACGGAGGGAGTATATGATAGTGGTTGATGTCTAACTAGCTAGCAAATAAAATGAAGGCGATCGTTATGAAGGTGTTGTATGTCTACTGACGACATGTATGTGGCAAAATGTATTGTGTGCCTGCAGCTCTGATCTGCGGTACTTATGATATACTAGTACAATTTATAAGC | |||||||||
gi|59944494|gb|DN158600.1|DN158600 GCW004O04f GCW Hordeum vulgare cDNA clone GCW004O04 3-PRIME, mRNA sequence TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): GGGGAACAGAAACATACACACCCGGATCAGCAGCGGAGAAGTGCTGAGTTCTCCGTGAACACTTGAACAGACTCGGCTGAGAGAGCAGTAAGCAGGGGAAAGAAAGGAACAAGGGGAAAAGATAGTGGAGCGGTAAGTTAATTAGCAGGGCAGCCATGGGATTCTGCTGTGGGCCTTCGGATGTCAAGGTGCTCCCAAATAGCATCTCCTCCTTGTCGCCGTCCTCCTCCCCTTCCCCATCGGCTTCTGCTAAAGATTCTGGCGATGGTGGCAAGAAGAAACAGCAGCAAGGTGTGAAGAAGGAGCAGAGGAGGGAGAAGAAGAAGAGCAAACTTGACCAGGCCGCCATGTCGATGCCCCGCTTCCCCTTCCATTCTCGGCCTGGTCTCATGTAATACTAGCTTACAGCCGAGGTTGGAGCTTAGGATATACTGTATAATATACTCCCTCTCTATCACAATACTTATAGTTGTGGGTACCTGTGTTAATATTTCTAACAATAAGTATTTAGATACGGAGGAAGTATATACC | |||||||||
gi|21161380|gb|BJ482923.1|BJ482923 BJ482923 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): GGCGCTGCGGCTGCAGCCATGACAGCTGCAGCGACGGCCGCTGTATCTGGAAAAGACGCTGGTAATGATAACCAAAAGCCGGGGGCAAAATGATACGTGCCACGGATTTGGTGGAGAGGCAGTGTTCTAAAATGCTTCTCCATAGTGTAGACCAGCATTTCAGCAGTTTATCAGTGCTGAAGAGCTGCGGAAGCTAATTGTGGCCTTCAGGAGGAGACCGCATTCACAATAAATAAGTTTTGCCAGCGCAATTCCCATGATACATGTGTTTTTTATAAACTCGGGGTATAAGAATTATGATGCCCTGATTTTTTGTTCCTGTTGATGATTTGCTCCCATGACCATGATACATTGTATCAGCGCTGAAGTGCCCTGAGACTGTAGTGTCAGGCACAAAATACCAGGACCGTTACGGTTCTACTCCCTCTGTTCCTAAATACTTGTAGTCGAGGAAAACTATATTAGTTCTTCTGAACTACAAGTATTTAGGTATAAAGATAGTAGTAAGCACATGCATCTTCCAGCATCTGCTCGCGACCTATGCTTGTACTGTATCTGTCTGGCTATGTGCTGTGTTTAGACACT | |||||||||
gi|161440352|gb|EX586698.1|EX586698 HDP33L17w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP33L17, mRNA sequence TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): GCGGGAAAAGATAGTGGAGCAGTAAGTTAATTAGCAGGGCAGCCATGGGATTCTGCTGTGGGCCTTCGGATGTCAAGGTGCTCCCAAATAGCATCTCCTCCTTGTCGCCGTCCTCCTCCTCTTCCTCATCGGCTTCTGCTAAAGATTCTGGCGATGGTGGCAAGAAGAAACAGCAGCAAGGTGTGAAGAAGGAGCAGAGGAGGGAGAAGAAGAAGAGCAAACTTGACCAGGCCGCCATGTCGATGCCCCGCTTCCCCTTCCATTCTCGGCCTGGTCTCATGTAATACTAGCTTACAGCCGAGGTTGGAGCTTGGGATATATAATATACTCCCTCTCTATCACAATACTTATAGTTGTGGGTACCTGTGTTAATATTTCTAACAATAAGTATTTAGATACGGAGGAAGTATATAGCTTCGGTAGCTGGGTTAAAGTTTTGAAATTCCTAGTGTCGTCACATGTTCTATTATTCATCGATTGGTCTGTTGTATTCTATGATCTAAATCATGGGTGTTCTTTTG | |||||||||
gi|60290607|gb|DN188846.1|DN188846 HO19G21w HO Hordeum vulgare cDNA clone HO19G21 3-PRIME, mRNA sequence TCCTAAATACTTGTTGTTGGG EST sequence (targeted fragment marked with yellow): ATGTATCTAAATACTTATAATTGGAAAAACTACACTAGTTCTCTCCAACTACGTATAGTTGTCTCAGCTATCCAACTACGTATAGTTGTCTCAGCTATAAGTATTTAGAAACAGAGAAAATATAAAGCATCACATATGGTCGCCGTTGTCCTCCTTAACATAAATACGTTTTACATCCACGCGTCTAAACGCGGGAAACATGCATATAGAATGCTTAATTCGTCAAGTATACATGATACATAAAGCATCACGTACGTAGCTAATCTTGGGTTGATTATTAAGGCCCTCTCGCAACTTATAAACGAGGTTAATTTCGCAAAAAAATATACCGTCCACGCTCGCCTTAAAAACCAACGGCGTCAATAGATTAACGACGGGTCTGCTGCGCGCCGGTGGCCGGAGCGGAGAAACGGTAGGCTCTGGGGACCCCGGCCGCGGCCATGGACGAGGACGACGGCGTTGAAGCCGACGTGAAAGACGATGAAGAAGAGGAGACCATGCCCTGGAAGCCGGCGTCGTGAGTCATCATGGTGGAGTTGTACTCTTCCCTCACGATGGTGTCTAGCTTCGCCG | |||||||||