mature miRNA: TCGATAAACCTCTGCATCCA species: Raphanus sativus var. oleiformis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|167435178|gb|FD938760.1|FD938760 RS1G648TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence TCGATAAACCTCTGCATCCA EST sequence (targeted fragment marked with yellow): GGAAAGTTAACAGGATGAAACTGAGATAGGCGGCGGCGTAGTCTGAATCGAACTTGAGAGAGAAACAAAATAGTTCTTCCTTTATTCTTCACCTAAAGCAAAGTGACGTGGAAGCAAAAAAGAGTAAGATGAACGACGACATGAACGAAGTGCTGAACAGATTCAAGGAAGAGAGAGAGCAGCTGATGAAAACATTTACCGAAGGGTACAAGAAGCTACTCAAGGACAAGGACGAAGAGCTCGAGAAAATGTTCAAGGACAAGAACGAAGAGCTCAACGAAGCAATGAAGGAAGAGCGTAGCGGGTTTGAAGATCTAGAGTATTTAAACACAGCCCTCTGCATCAAATTACGACAAACCAATGATGAGATCCAAGAAGCACACAAAGAATTGATCACTGGATTGAGAGGCTTATCGGGTGAAAGATCCACGATCAGAGTAAAGACGATGGGACAAGTTGATGAAAAGCCTTTCCTGAAAGTATGCGAGCAGAGATTCAGTTGCCAAGACGTTGCGCTGCAAAGCGCCAGGCTTTGCTCGGAATG |