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mature miRNA: TCGATAAACCTCTGCATCCAG
species: Vigna unguiculata
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|190446860|gb|FG838764.1|FG838764 UCRVU05_CCNN3014_b1 Cowpea IT84S-2049 Mixed Tissue and Conditions cDNA Library UCRVU05-2-2 V

TCGATAAACCTCTGCATCCAG
|||| ||||||| |||||||
TGCTAGTTGGAGAAGTAGGTC

EST sequence (targeted fragment marked with yellow):
ACTAGTTCTAGATCTCTCTATTCTCCTATCCCTCTCTCATTCATTCTGCTGTGGCCTGCCGTAGTGGTACAGTTTGGCATCAAGCTCTATCAATTTGTTCATTTTCTATCGCAATAATTATAGCAGTTATGGTTTCATGTATTGAGCGTGTGTTGATTTTGGGTACTAAATATGGGGTTAAATTTCATAGGGTTTTAGAAAAATTGATCCCGATAGGTGGGAGTTTGCGAACGAAGGATTCCTGAGAGGGCACAGGCAGCTTTTGGCAAACATAAGGAGAAGAAAGCAACCTTCTCAGCCTTCTAGTTCTCAACAAGGGCAAGGTCACTGTGTTGAAGTGGGTCGTTTTGGACTGGATGAAGAGGTTGATCGTTTAAAGCGTGACAAGCAGGTGTTGATGATGGAGCTGGTGAAGCTGAGACAGCAGCAGCAGAATACGAGGTCGTACCTTGAGGAAATGGAGGAGAGGCTACGAGGGACAGAAATTAAGCAGCAGCAGATGATGTCTTTCTTGGCTAGAGCTTTGAAGAACCCCACCTTCATCCAGCAGCTGCTCCAGCAGAAAGAGAAGAGGAAGGAGCTTGAAGAGGCCATGTCAAAGAAGAGGAGAAGACCAATCGAGCAAGGGCCAAGTGGGGTTGGAGAATCAAGC