| mature miRNA: TCGGACCAGGCTTCATTCCCC species: Glycine max database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|208153941|gb|GD956142.1|GD956142 454GmaGlobSeed698791 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TCGGACCAGGCTTCATTCCCC EST sequence (targeted fragment marked with yellow): GAAGAGAAAGCCTTACCATAAGGGCATGCGAGATATGAAAATGGAGAGAAAGAAATTTAAATTAAGGAAAAAGCAAAAGTTGGGTGGGGGGAATGAAGCCTGGTCCGAGAATCATTTTTTTGNGTAAGAGGGTAAATTTTCCATTGGAAACTTTCACTGATCTCAGTACTCTACTCCTCCTCCTCCTCCATGACCTCGAGCCAGACAACATTCCTCTCAACCTCACCTTTGCAAGCTAGGAAGAAGAAGCATGTCAAGTTCTCAACCACACAC | |||||||||
gi|208037618|gb|GD832272.1|GD832272 454GmaGlobSeed574921 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TCGGACCAGGCTTCATTCCCC EST sequence (targeted fragment marked with yellow): CTCAACCTCACCTTTGCAAGCTAGGAAGAAGAAGCATGTCAAGTTCTCAACCACACACAACACACATGATCTTGTGTTTGAAGTTTGAAGTAGAAACAAATGAAAGGAAGAACTTTTGAGGGGAATGAAGCCTGGTCCGAAGCCTTATAGTTCCATCCACTGTGAACCTCATTTGTGAAAAGCCTCGAGCCAGCCAACGTTCCCCTCAATACCAACCCATCTCAACACAACACTCTTCC | |||||||||
gi|193425461|gb|FK386522.1|FK386522 454GmaGlobSeed121154 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TCGGACCAGGCTTCATTCCCC EST sequence (targeted fragment marked with yellow): AGTGGGTCCAAATGCCTTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCACTGGTGTGGCAGCTAGAGCCTGTGGTCTAGTGGGACTAGAACCCACTAGGGTTGCAGAAATCCTCAAAGATCAGCCTTTGTGGTTTCGCGATTGCCGAGCTGTTGATGTTCTCAATGTGCTGCCCACAGCAAATGGTGGAACCATTGAGCTGCTTTATATGCAG | |||||||||
gi|298193504|gb|HO034110.1|HO034110 ocpsga0_0332_D01.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN TCGGACCAGGCTTCATTCCCC EST sequence (targeted fragment marked with yellow): GGGGGGGGGAGGCATGGTCCGAGTAGTATGTGGAAGCAGCAATGAAGATGAGACAGAATGCCAAAACATGAGGTTTAAGGTTAAGGAAGGTGATGCTTTTCTGGTGCCTAGGTTTCATCCAATGGCTCAGATGTCATTCAATGATGGACCATTTGTTTTTCTCGGCTTCAGCACTTCAGCAAAGAAAAACCATCCTCAATTTTTGGCGGGAAAGGGGTCAGTGCTTCATATTCTAGACAAAAGGATACTGGCTACCTCTTTCGGTGTGAGTAACAGAACCATTGACCAGCTTCTGCGTTCTCCCGAGGATTCCATCATTTTTGGGTGCAGTTCCTGTGCAGAGGAAGAGGAGAAGATAATGAAGGATGAGGAAGAGAATAGAAAGAGAGAGGAGGAAGAGAAGGAGAAGAAGAAGGAAGAGGAGGAAGAGAAGAGAAAGAGAGAGGAGGAAGAGGAGAGAAAGAGAGAGGAGGAAGAGGACGAGAAGAAGA | |||||||||
gi|193572956|gb|FK528727.1|FK528727 454GmaGlobSeed263359 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TCGGACCAGGCTTCATTCCCC EST sequence (targeted fragment marked with yellow): AATAGAAAACAAAAGTTGGGTTGGGGGGGAATGAAGCCTGGTCCGAGAATCATTTTTTCTGTGTGTGTGTTAAGAGGGTAAATTTCCATTGGAAACTTTCACTGATCTCAGTACTCTCCTCTTCCTCCATGACCTCGAGCCAGACAACATTCCTCTCACCTCACCTTTGCAAGGAAACATCTCAAGTTCTCAACCACACACATGACGTGTGTGTAGAGAGATCCTT | |||||||||
gi|193334481|gb|FK301729.1|FK301729 454GmaGlobSeed36361 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA s TCGGACCAGGCTTCATTCCCC EST sequence (targeted fragment marked with yellow): AGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCACTGGTGTGGCAGCTAGAGCCTGTGGTCTAGTGGGACTAGAACCCACTAGGGTTGCAGAAATCCTCAAAGATCAGCCTTTGTGGTTTCGCGATTGCCGAGCTGTTGATGTTCTCAATGTGCTGCCCACAGCAAATGGTGGAACCATTGAGCTGCTTATATG | |||||||||
gi|193400827|gb|FK368748.1|FK368748 454GmaGlobSeed103380 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TCGGACCAGGCTTCATTCCCC EST sequence (targeted fragment marked with yellow): AGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCACTGGTGTGGCAGCTAGAGCCTGTGGTCTAGTGGGACTAGAACCCACTAGGGTTGCAGAAATCCTCAAAGATCAGCCTTTGTGGTTTCGCGATTGCCGAGCTGTTGATGTTCTCAATGTGCTGCCCACAGCAAATGGTGGAACCATTGAGCTGCTTTATATGCAG | |||||||||
gi|207823053|gb|GD794428.1|GD794428 454GmaGlobSeed537077 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TCGGACCAGGCTTCATTCCCC EST sequence (targeted fragment marked with yellow): GCAAGAGCGACTATTAGACAGACACATAGATCATAATCCCTAGCTACACCTATGATCTTGTGGTTTGAAGTTTGAAGTATAAACAAATGAAGGAAGTACTTTTGAGGGGAATGAAGCCTGGTCCGAAGCCTTATAGTTCCATCCACTGTGAACCTCCTTTGTGAAAAGCCTCGAGCCAGCCAACATTCCCCTCAATACCAACCCATCTCAACACC | |||||||||
gi|207793494|gb|GD767556.1|GD767556 454GmaGlobSeed510205 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TCGGACCAGGCTTCATTCCCC EST sequence (targeted fragment marked with yellow): GGGCATGCGAGATATGAAAATGGAGAGAAAGAAATTTAAATTAAGGAAAAAGCAAAAGTTGGGTGGGGGGAATGAAGCCTGGTCCGAGAATCATTTTTTTGTGTAAGAGGGTAAATTTCCATTGGAAACTTTCACTGATCTCAGTACTCTACTCCTCCTCCTCCTCCATGACCTCGAGCCAGACAACATTCCTCTCAACCTCACCTTTGCAAGCTAGGAAGAAGAAGCATGTCGAGTTCTCAACCACACACAACACACATGATC | |||||||||