| mature miRNA: TCGGACCAGGCTTCATTCCCC species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|73880506|gb|DT483244.1|DT483244 WS02522.B21_A23 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02522_A23 3', mRNA sequence TCGGACCAGGCTTCATTCCCC EST sequence (targeted fragment marked with yellow): GAGTGAATTTAAATCACATTCAAACCACTTAATGCAGCTTAACTCAAGTAGGGTGCGATAAGGGGTGTCAATACCTTCCCTAGCCACAGCCAACCCCTTACCTTTAACATTTCTGATAAGACCAATACACCCGAGTTTTTTAGCGATCCTTAATCAAACAACTAGGTGGAGACTCCTGACCCTTCAATGTCGCTTGTCCACGTGTGATAAAAAAACAACTTCTACGCACCACACTCTTAAACATCCCCTGCATACTGCTCCTCTAGAAAGCAATCATCAAGCTTTACGCTGGAAAAGTATGACATCCATATTCCACATTGCGGGGAGACTTTAATTACGAACCTGCCATGTTCAAACATCCAGCTTTGATTTTGGAAAACAGCAAAACTCTTCTGAAAGAGGAAGCAAAGAAACCAAGGGCACGACTATAGAAAACTTTAAATATCTGAGCCAAAATGTTGTATCCAAAATTCATATCACGAGTATGCAAGTACGTCTAGACTTTTATTACCAACAAGTTTTCTATCTCTTTCAATAGAGAATCGAGAGACTCTTCAAACAATGACAGAAAGCGCATCACTTTCTTGCTTGCACATCTTCACACAGCACATGCCCTCTTCTCTGTAAAATATTGATTTGGAGATCAGAGCCAAACCTCAGAAACAACTGTACATGCAACAGCCCTTGAGATGGAAGCAATGATTGGGGGGAATGAAGCCTGGTCCGACAACCCTAATACGTGATCAATCTTAAATAAGATACTAGATCTACAGGTAGAAAGTTAGAATAGATTGATCAACAAAAAGT | |||||||||