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mature miRNA: TCGGACCAGGCTTCATTCCTC
species: Petunia axillaris subsp. axillaris
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|227606425|gb|FN026325.1|FN026325 FN026325 Petunia axillaris subsp. axillaris pool of root and petal tissue Petunia axillaris

TCGGACCAGGCTTCATTCCTC
|| |||||||||||||.||
AGGCTGGTCCGAAGTAGGGTC

EST sequence (targeted fragment marked with yellow):
TTAGGTGTCTTTTTTTCTAGAAGGGTGTTTGGAAAATAGGAAATCTTGAATTTCTTTTAGGTTTTGAGGGAGAATGGCTATGGTGGCACAGCATCATAGGGAGAGGGAGAGTGGTAGTGGTAGTATTACCAAACATCTTGATAGTAGTGGGAAGTATGTAAGATATACAGCTGAGCAAGTTGAGGCTTTGGAGAGGGTCTATGCAGAGTGCCCTAAGCCTAGCTCATTGCGCCGGCAGCAATTGATCCGTGAATGCCCTATTCTGTCTAATATTGAGCCTAAGCAGATCAAAGTTTGGTTTCAAAACAGAAGGTGTCGAGAGAAGCAAAGGAAAGAGTCTTCTCGACTACAGACTGTAAATAGGAAGTTGTCTGCGATGAATAAACTGTTAATGGAGGAGAATGATCGCCTGCAGAAACAGGTGTCGCAGCTTGTGTGTGAAAATGGCTATATGCGGCAACAATTGCAAAGTGCATCAGCAGCCACTACTGATGTAAGTTGTGATTCAGTAGTAACCACTCCACAGCATTCCCTTAGAGATGCTAACAACCCTGCTGGACTACTATCAATTGCCGAAGAAACCTTGGCAGAGTTCCCTTCCAAGGCTACAGGAACTGCTGTCGATTGGGTCCCAATGCCTGGGATGAAGCCTGGTCGGATTCAGTTGGGATTTTCGCCATTCACAAAGTGCAGTGGA



gi|227611079|gb|FN042511.1|FN042511 FN042511 Petunia axillaris subsp. axillaris pool of root and petal tissue Petunia axillaris

TCGGACCAGGCTTCATTCCTC
||||| |||||||||.| ||
AGCCTAGTCCGAAGTGACAAG

EST sequence (targeted fragment marked with yellow):
GGGGGATGAAATTAAGAATATTATTGACTTAAAAATAAATGACAGAACAAAGAGCGAGCTCTCCTGAATAGCAATCAAATACTATGCCACAATAAATAGCTAAATTACAACCAGTGTCACACTACAATCAAATAATACAACATAGACTCTGTTTCAGCTATATAGAAATAGACTTAAAAAATGACTTTTTCTCAAGCTTCTAAAACTCAAAATCCCCTGGAGTTGAAAGCACATGATGCAATGAAAAGTAGGAACCCAACTAAACTGATTGATAATTTTGAGTTGCTTCCTGCAGATGATGATCCAGTTGTTGAAGGACCTGTTTTTGACCCTGTAGTTCCTGTTGGAACAGTGAAGCCTGATCCGAATGAAGTTGCTGGGGTTTCATTAGAGGAATCAAATGGAGTTGTGGAACCTGCAGGAGAACTTGCTGGA