| mature miRNA: TCTATGTCACATCGGATGTTT species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|89169900|gb|CI110259.1|CI110259 CI110259 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage Oryza sativa Jap TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): AATTANATTCATTACTTGCAAAGGACCCTACCTCCCAGTTTCATTCCTGCCTCATCTCAATCACAGGAGTACTACAAACTTCTGCAAACATGCAACATCTCCATCTATATCTGATGCCGATTGCTTCTACCCCTCGCTATCTCAAACCTCATCCTCCTAACTAAGGGGCTGGTTGGTTTTCAGGGACTTATTCACCTCAGATATTTAAACACTAATTTAAAATATTAAACATCCACTAATTACAAAACCCATTTCATAAGTTTAGACTAATTCGCGAGACAAATCTTTTAAGTCTAATTACAACATGACTTTGACCATATGATGCTATAGTAAACTTTTAATAATTATGGATTAATTAGGCTTAAAAAATTCGCCTCACAGATTAGCTCTCATTTATGAAATTAATTTTTAAATTAGTCTATGTTTAATACTCTAAATTAACGTCAAACATCCGATGTGACATAGACTAACAAGTTTTAGCCCCATCTAATC | |||||||||
gi|89183736|gb|CI046301.1|CI046301 CI046301 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTATGAAATTAATTTTTAAATTAGTCTATGTTTAATACTCTAAATTAACGTCAAACATCCGATGTGACATAGACTAACAAGTTTTAGCCCCATCTAATCACCCCCTAAGCATATCATGCTGTTACAGTTGACACCATCACGCGATGTAACCAAGGGTGCACGCAACACACACCAACCTGTCATCGCTCACACTGCTGCTGTGCTGTGCTGCACTCTTCTCTCCTGGCCTTGGGGAATAAAACAAGGCGATCGGTTTGCTTTCGTCTTCCTCCCCTTCTCGCCATGCAAAGGGCGCTTTGGTTCTTGGTTTCTTCTTCCTTTTGCCTCAGAAATAATCACACCGGCATTGATGAACCAAGCATATGCAGGTACTACCTCAGAGAAAAAAAAAACTCCTTCGGGTAAGCTAGAATGGAAATGAAGTTCTGCGCTAGCGCTGCCGCGGCTGCACTGCTGCTACAGCAGCAGTGCCCTAACAAACTATAGTAAAAGCTTTTGAGCTGGAGCACCGG | |||||||||
gi|88224317|gb|CI224166.1|CI224166 CI224166 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): CATCCGATGTGACATAGACTAACAAGTTTTAGCCCCATCTAATCACCCCCTAAGCATATCATGCTGTTACAGTTGACACCATCACGCGATGTAACCAAGGGTGCACGCAACACACACCAACCTGTCATCGCTCACACTGCTGCTGTGCTGTGCTGCACTCTTCTCTCCTGGCCTTGGGGAATAAAACAAGGCGATCGGTTAGCTTTCGTCTTCCTCCCCTTCTCGCCATGCAAAGGGCGCTTAGGTTCTTGGTTACTTCTTCCTTTTGCCTCAGAAATAATCACACCGGCATTGATGAACCAAGCATATGCAGGTACTACCTCAGAGAAAAAAAAAACTCCTTCGGGTAAGCTAGAATGGAAATGAAGTTCTGCGCTAGCGCTGCCGCGGCTGCACTGCTGCTACAGCAGCAGTGCCCTAACAAACTATAG | |||||||||
gi|40486042|gb|BX897767.1|BX897767 BX897767 Oryza sativa library (Han B) Oryza sativa cDNA clone p250e08p3, mRNA sequence TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTAGTCTATATTTAATACTTCATATAAGTGTTAAACGTTCGATGTGATATGGTGTAAAATTTTTATATGGGACCTAAAAAGGGCCTTAGTTTGATCTCTTCAACCGTTTACGAAATTCCTGTCTTGTGAAGTATGTTTTCCGTTTACGTTAAAGTGACATGAAAACTATACCAGTGGCTGCGTTCGAATGTCCAACAATTGTTGGATGAAATTTTAGATTCTCATAGTATGCTTTTCAAACTGCTAAACGGTGTATTTCATATGAAAACTTTCTATATAAAGGTTGCTCTAAAATATCAGATTAATCCATTTTTCAAGTTTGTAATAATTAAAACTCAATTAATCACACGTTATTACCATCTCATTTTACGTGAAACACTTAATCTTTATTTTTAGGAGATACAAAC | |||||||||
gi|29623261|gb|CB628272.1|CB628272 OSIIEb03L19.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb03L19 5', mRNA sequence TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): AAAGTTTACTGGAGCATCACATTGTCAACTTTATGACATAATTAGACTCAAAAGATTCGTCTCGCGAATTAGTCCAAGCTTATGGAATAGGTTTTGTAATTAATGGATGTTTAATACTCCAAATTAGTGTCCAAATATCCGATGTGACATGGACTTGGAATAAGTCCCTGGAAACCAAACAGCCCCTTAGCAGCTCCAAGTCACCGGATTTGCCTTCTACAGTTTGTTTTCTTCCACTGGCAACCTTTATTTTTTTTTAATGTTTGGCCCGTCTTTCCCTCCTTTGCCTGCCTGCCAATTCCCCCAGGCTCGCCACCCTGGCCGATCCGTGACCCAACCACCGCACCACCTCCACCTTACATTTTGCTGGATGCTCGAGCAGTCGGCGCAAAAGCTCTCCACCGACGAAGCTCGCCGCCCGTTGGATCTAGCAGCAGCATGTGGAGTTGGGGCAAGTGGGTGTCGGAGATCTGAAAGCTGCACAAGAACTCGCGCATCTGGCTCTGCACGTTTGCCACCGCCGTGCCATCAAGGGCCGCGCCACCCCCGTCCTCTTCAACTAACCGGAGATCGCGCACGTGCTTCCCCGCTCGGCTTCGGCAGCCCCCAACGACGTGAGAGCCACACGGCGCTCGCGACGGCGATGGACGACCCCGATCCGGCGGCGGTCGCGGC | |||||||||
gi|29634098|gb|CB639107.1|CB639107 OSJNEa08G17.f OSJNEa Oryza sativa Japonica Group cDNA clone OSJNEa08G17 5', mRNA sequence TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): TCATGAACTGTTCGGGGTTTCACAATCACGCGCCAAGGGTAAAGCTGATGATGAAGCATCGAAAATCTCATGTGACATGGAAAACAAACACACCTCTAACCAAAGTACTAATGGTTTGGACATTAATGCTTTACCACCTGATGATTCTGGAAGTGATATTGGGGATAAACCATCATTTTGTCAATCTGAGGTATAAAGTGAATTAACACAATGTTCAAAACACAATCACGAGGTTAATAGTTCTGTCAAGATGCATGCTGGAACTCATTGTACTTCCGACAACCAATGATACATTGACAGGAGTGGATTCAAA | |||||||||
gi|86869795|gb|CI316523.1|CI316523 CI316523 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): AAGACATACCAGTCGTACTTAAAATCATTCCAGATTACAGACTAGGGGCTGTTTGGTTTCCAGAGACTTATTCTAAGTCCCTGTCACATCGGATGTTTGGACACTAATTTGGAGTATTAAACATACACTAATTACATAACCCATTTCATAAGCTTGGACTAATTCGGGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTTGACAATGTGATGCTACAGTAAACTTTTGATAATTATGGATTAATTAGGCTTCAAAATTCGTCTCGCGGATTAGCTCTAATTTATGAAATTAGTTTTTTTATTAGTCCATGTTTAATACTCTAAATTAGCGTCCAAACATCCGATGTGACATGGGTTAAAAAGTTTTAGGCCCATCTAAACACCCCCGTCTATAGGTCCCCTACAACAACGTTCATTAAATCCAGGAATGCATCTTTCAAATAGTAGCAAGCTACAGGCATCTAACTTCATCAGGGCTAACAGGAACAGCACGT | |||||||||
gi|86497175|gb|CI139808.1|CI139808 CI139808 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): AACATCCGATGTGACATAGACTAACAAGTTTTAGCCCCATCTAATCACCCCCTAAGCATATCATGCTGTTACAGTTGACACCATCACGCGATGTAACCAAGGGTGCACGCAACACACACCAACCTGTCATCGCTCACACTGCTGCTGTGCTGTGCTGCACTCTTCTCTCCTGGCCTTGGGGAATAAAACAAGGCGATCGGTTTGCTTTCGTCTTCCTCCCCTTCTCGCCATGCAAAGGGCGCTTTGGTTCTTGGTTTCTTCTTCCTTTTGCCTCAGAAATAATCACACCGGCATTGATGAACCAAGCATATGCAGGTACTACCTCAGAGAAAAAAAAAACTCCTTCGGGTAAGCTAGAATGGAAATGAAGTTCTGCGCTAGCGCTGCCGCGGCTGCACTGCTGCTACAGCAGCAGTGCCCTAACAAACTATAGTAAAAGCTTTTGAGCTGGAGCACCGGAAAGCTGAGTTCCTAGACCTAACATGACCTAAAGGCACCTAACTCTAATTAATCCAACCGGAACTAAGATAATACTGGAAAAGAAAGGGGA | |||||||||
gi|58603359|gb|CK013887.1|CK013887 33308rsicef_6745.y1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica G TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): ATCAATGACCTTTGTGGGATTAAGGAGTCTGACACTGGGCTGGCACCACCCAGCCAATGGGATCTAGTATCGGATAAGCAGATGATGCAAGAAGAGCAACCGCTGCAAGTGGCTAGGTGTACCAAGATTATAAGTCCTAATACTGATGATGCTAAATATGTGATTAATGTAAAACAAATTGCAAAGTTTGTGGTTGGCCTAGGGGATAAAGTTTCTCCAACTGACATTGAGGAAGGGATGAGAGTGGGTGTTGATCGGAACAAGTACCAGATTCAAATTCCTTTGCCACCCAAAATTGACCCAAGTGTTACCATGATGACAGTTGAGGAAAAACCTGATGTGACATATAATGATGTGGGTGGTTGCA | |||||||||
gi|88991781|gb|CI034919.1|CI034919 CI034919 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): AGCAGAAGTCGCGGATTGCTTAGCAGCTCCAAATCATCAAATTTGCTGGCAATCAGAACAGCGAGATAGCAAAAGTCGCCGGATTGCTTAGGGGGTGTTTAGATGGGGCTAAAACTTTTTAGCCCAAGTCACATCAGATGTTTGAACGCTAATTTAGAGTATTAAACATAGACTAATAAAAAAACTAATTTCATAAATGAGAGCTAATCCGCGAGACGATTTTTTTAAGCCTAATTAATCCATAATTATCAAAAGTTTACTGTAGCATCACATTGTCAAAATCATGACATAATTAGACTCAAAAGATTCGTCTCGCGAATTAGTCCAAGCTTATGGAATAGGTTTTGTAATTAATGTATGTTTAATACTCCAAATTAGTGTCCAAATATCCGATGTGACATGGA | |||||||||
gi|117246122|gb|CT862566.1|CT862566 CT862566 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): TTTCAGATGGGACGATTAGGAGGAGTTCAGTCAGAAGTGACCTGAAAGGTTCTGAAGATTTCCATGGAATCATCTTTTCTGATGAGGACAAAGACTATGGGGTTAAAACAATTCATGCCAGCAGGCCAAGTATTAAAGCACTGATGGAAGAAGAGATGGCCAGTGGAACGCAGATCTTGAAGGAAACACAAAGGAACATATTTGGGATACGTTCTGATGATTTGAAGTCTGTGAACCTGCAGAGGGATCTGATGTGACCTAGACTTGGGCTACAGTCTCATGGAATTATACAGAAATCATATAGCAGTCGCGATATTATCACTTCGAAGTATCAGATCACTCTGCCAGTTTGATTGACAAAGAGCACAATACTGATGCTAGTACTCATGCTAAACAAATCTCTGGAGTATAAAGAAAGCACCTGGAACCTGGGGGTTGAAGCAAGTAATACCCCAATAATTCTGCAAACGGGAAAATCCCACAACAGCAGTTCCCAACCTTGGGCCCAAGGAATTTCTTTGATGCCTTACCAATGGTTGGCGCCAACCCAAAAATTTTTTTTTGTGGGTTTTTTAAAAAACCCCAACCTTTTGGAGTGGTGGCAATGCCTCGGCAAACACCCGTCCCCCACCCTTTGGAAAAACCCCCTTTTTGTAACACCTGGGGAGAAATGGAACCACAAAAAACCCAAAACCGGAAAGGGTTCCCTTTAAACCCCCCTAAGGAGCCCCTTGGGGGTGTTTAAAAAAAAACGCGGGCCC | |||||||||
gi|58675342|gb|CK064029.1|CK064029 71155rsicem_23167.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): GCACGAGGCACCTTCTCTCCACGACTCCACCTGAAGCGCCTCTCGCCGCCGCCGGAGAAGACGCGCAGCGGCAGCAGCGGCGGAAGCGGCGGTGAGCCATGGCGCCGGAGCCGGAGGACGACATCATGAACGAGAAGAACCCCCGCCCGCTCGACGAGGACGACATCGCTCTCCTCAAGACCTACGGGCTTGGGCCATACTCCACAAGCATTAAGAAGGTGGAGAAAGAAATAAAAGAAATGGCTAAGAAGATCAATGACCTTTGTGGGATTAAGGAGTCTGACACTGGGCTGGCACCACCCAGCCAATGGGATCTAGTATCGGATAAGCAGATGATGCAAGAAGAGCAACCGCTGCAAGTGGCTAGGTGTACCAAGATTATAAGTCCTAATACTGATGATGCTAAATATGTGATTAATGTAAAACAAATTGCAAAGTTTGTGGTTGGCCTAGGGGATAAAGTTTCTCCAACTGACATTGAGGAAGGGATGAGAGTGGGTGTTGATCGGAACAAGTACCAGATTCAAATTCCTTTGCCACCCAAAATTGACCCAAGTGTTACCATGATGACAGTTGAGGAAAAACCTGATGTGACATATAATGATGTGGGTGGTTGCAAGGAACAGATTG | |||||||||
gi|218502179|gb|FG965559.1|FG965559 MA_LYP9_04343 Mature embryo cDNA Library of LYP9 Oryza sativa Indica Group cDNA 5', mRNA seq TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCATGACCTTTGTGGGATTAAGGAGTCTGACACTGGGCTGGCACCACCCAGCCAATGGGATCTAGTATCGGATAAGCAGATGATGCAAGAAGAGCAACCGCTGCAAGTGGCTAGGTGTACCAAGATTATAAGTCCTAATACTGATGATGCTAAATATGTGATTAATGTAAAACAAATTGCAAAGTTTGTGGTTGGCCTAGGGGATAAAGTTTCTCCAACTGACATTGAGGAAGGGATGAGAGTGGGTGTTGATCGGAACAAGTACCAGATTCAAATTCCTTTGCCACCCAAAATTGACCCAAGTGTTACCATGATGACAGTTGAGGAAAAACCTGATGTGACATATAATGATGTGGGTGGTTGCAAGGAACAGATTGAAAAAATGCGGGAGGTTGTTGAGCTTCCCATGCTTCACCCAGAGAAGTTTGTNCAGCTTGGTATTGATCCTCCAAAGGGGGTCCTTTGCTATGGCCCTCCTGGAACTGGCAAA | |||||||||
gi|88345448|gb|CI656106.1|CI656106 CI656106 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): TTTAGATCTAGGGGTGTAAAGTTTTGACATGTCACATCGGATATACAGACACACATCTGAAGTATTAAACATAGACTAATAACAAAATAAATTATATAATCCACCTGTAAACCGCGAGACGAATTTATTAAGCCTAATTAATCCATCATTAGTAAATGTTTACTATAGCACCACATTGTTAAACCTATGGCGTAATTAGGCTTAAAAGATTCGCCTCATAATTTACATTCAATCTGTGTAATCAGTTATTTTTTCGTCTATATTTAATACTCCAATACTCTATACATATCACGTGTCCAATCATTCGATGTGATATGGTGTAAAATTTTACTATGAGATCTGAACAGGGCCATACTATCTGCGTACGTTGATGGCAGTCTTGACATGAGGTATCATGCAGATG | |||||||||
gi|86835331|gb|CI346806.1|CI346806 CI346806 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): AGTTATTTTGTAGTATATATTTAATACTTCATGCATGTGTTCAAACGTTCCATGTGACATGGTGTAAATTTTTGGGGTGAGATCAGTATCGTCGTGCCTGTAGCAGTTAAAGCAATTGATATTTGCCTTTATTTGATTAAAGACCTTTATTCATGTTGGGATACTACATCACTACATGCCAGTTTTTATTGGTAGTACTAACTGATCGAACGATCATGCAATAGGATAACAATCCGATGGATCGATCGATCACTCAGCTAGCTAGCTGGCGAAGTTGCGCTGGTTGTAGCAGTCGAGGTTGCTGCCGTAGCCTGCGCCGAGCATGTCGCAGTAGCGCTTGTAGTAGCCGATGCGGTCGACGTTGGCGTCGTTCTGGCCGACGCCGCACTCGATGCCGCCGTTGATGATGTTGGTGATGACGCCATACCCGGGGACGCGGCCGGC | |||||||||
gi|89175280|gb|CI111799.1|CI111799 CI111799 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): AAAGGTGCCAAAATAAGACATACCAGTCGTACTTAAAATCATTCCAGATTACAGACTAGGGGCTGTTTGGTTTCCAGAGACTTATTCTAAGTCCCTGTCACATCGGATGTTTGGACACTAATTTGGAGTATTAAACATACACTAATTACATAACCCATTTCATAAGCTTGGACTAATTCGCGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTTGACAATGTGATGCTACAGTAAACTTTTGATAATTATGGATTAATTAGGCTTAAAAAATTCGTCTCGCGGATTAGCTCTCATTTATGAAATTAGTTTTTTTATTAGTCCATGTTTAATACTCTAAATTAGCGTCCAAACATCCGATGTGACATGGGTTAAAAAGTTTTAGCCCCATCTAAACACCCCCGTCTATAGGTACCCCATACAACAACGTTCATTAAATCCAGGAATGCATCTTTCAAATAGTACAAAGCTCCAGCAATCTAACATTCATCAGGGCTAACAGGAACAGCACGTTTTCCAGCTT | |||||||||
gi|117212100|gb|CT851261.1|CT851261 CT851261 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): AGATGGCGGCGACTGCGGCGGCGGAGGCGGAGGCGGCGGCCGGCGACGAGGCGTGGTGCCGGGAGACGGTGCCCCGGGTGATGGAGCTGGTGAGCCCGCGCCTCCCCCAGCGCGACGCCTGCGCCCTGCTCGCCGTCAGCCCCTGGTGCCACCGCGCCCTCGTCGCCAACCCCAAGCTCTGGGAGGTGCGGTACCGCGTCGCGTCGCTCCCTTCTACCTTCTTCGTCCTCCCGCTGCTTGCTCTTGGTCTCGACTCTCGAGGCGTGCTTCTTCGTTGTTTCGCGCTGCTGAGGAAGTGGTCCCTCGCCTGGGCTTCGTCGCTGGAGTGGCCGGTGATTTAGCTCGTGTAGTCGGTGCGCCTCCTGTTCGGCCTTGTTCTGAATTGCCAAAAGCATAATGCAGCGAATTCGTACTCCATGTTCAAATCTGTCGCACCGGATGGTAGCAAAATGGTTCTTCGATTCGTCCCTTTTTGTTTATTGGGTCATCGTATTGTTTCTCTATTTTTCATTTTTGAGGGGGGAAAGTAATCGTAATTTTGCCTGCTAGAGTTGAAATTCAGATTGCGGGACTCCTGCTAGAAGGATTATTAGTCTCTACAATACTTAATTTATCCCCCATCTTGATTTATTGGGTAATAATCTTGGATTTTTTTTTCCCCGAACCATTGAACAAAATGGCCTTCTTCAATATTTTAATGGCAGGGTGTTTGGATCTGCATTGAAGATGAAAACAAAGCTTGGTGGAACCGACTTTTTTTTCTTTCGATTTCTCCTGGGCAAGAATTAACCCTTCCTTTTGGAATATTTATTTTTTTTTTTTTAGTCGGTGGAAACTCTCTTCGAATCTGGATTTATATAGATTGGCCTTGGATCTTTCCTCTCTCTGAATATGTATAATTTCACACCCCACTTTGTGGGGTGGGGGGGGCTCCCACTTTTTCCTGCTTCTAAATTTCGACAAAATATCCCACCATACTGGTTTTTTTTTTTGTGAGGCCTACCCTGCTCCCAACGCGTCCCTTCCAACTGCACTTTGTATCCCCTCCATTCTTTGTACAACAACCTTCTTTTAAACTTGCCTGTTGGAGGCGGCGAGTTAATTGGTGGTTGTGAGCTCCCTGTTGTCCCCTCCTCTGCGGTGTGCACTATACGTCATGTTAGTTGATTTATGTTATTGCGTCTAACAGATTGTTTTACTTGTGATGCTCTCTCTGCTGATAATTCTCTATTTCTTTGCCCTCTATACGATCAACTTATACATCAGATGTGATATAGACAAAGGGTAAGGCGTTGATATACTGTTGTTGGTTTTTGCTGGCTGCCCTCGCGACTGGGATAAACAGTAACGAAAACATGGCATCGCAAGACATGGA | |||||||||
gi|86501815|gb|CI144448.1|CI144448 CI144448 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): GTATGAAATTAATTTTTAAATTAGTCTATGTTTAATACACTAAATTAACGTCAAACATCCGATGTGACATAGACTAACAAGTTTTAGCCCCATCTAATCACCCCCTAAGCATATCATGCTGTTACAGTTGACACCATCACGCGATGTAACCAAGGGTGCACGCAACACACACCAACCTGTCATCGCTCACACTGCTGCTGTGCTGTGCTGCACTCTTCTCTCCTGGCCTTGGGGAATAAAACAAGGCGATCGGTTTGCTTTCGTCTTCCTCCCCTTCTCGCCATGCAAAGGGCGCTTTGGTTCTTGGTTTCTTCTTCCTTTTGCCTCAGAAATAATCACACCGGCATTGATGAACCAAGCATATGCAGGTACTACCTCAGAGAAAAAAAAAACTCCTTCGGGTAAGCTAGAATGGAAATGAAGTTCTGCGCTAGCGCTGCCGCGGCTGCACTGCTGCTACAGCAGCAGTGCCCTAACAAACTATAGTAAAAGCTTTTGAGCTGGAGCACCGGAAAGCTGAATTCCTAGACCTAACATGACCTAAAGGCACCTAACTCTAATTAATCCAACCGGAACTAAGATAATACTGGAAAAGACAGGGGAAAAAAATCCAGGTACGGTACAGGACTAATACGGCTGGAAAAATGTAC | |||||||||
gi|89170156|gb|CI039433.1|CI039433 CI039433 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): TTTTTAATTATGTATGTTTAATACTCCAAATTAGTGTCCAAATATCCGATGTGACATGGACTTGGAATAAGTCCCTGGAAACCAAACAGCCCCTTAGCAGCTCCAAGTCACCGGATTTGCCTTCTACAGTTTGTTTTCTTCCACTGGCAACCTTTATTTTTTTTTAATGTTTGGCCCGTCTTTCCCTCCTTTGCCTGCCTGCCAATTCCCCCAGGCTCGCCACCCTGGCCGATCCGTGACCCAACCACCGCACCACCTCCACCTTACATTTTGCTGGATGCTCGAGCAGTCGGCGCAAAAGCTCTCCACCGACGAAGCTCGCCGCCCGTTGGATCTAGCAGCAGCATGTGGAGTTGGGGCAAGTGGGTGTCGGAGATCTGAGAGCTGCGCAAGAACTCGCGCATCTGGCTCTGCACGTTTGCCACCGCCGTGCCATCAAGGGCCGCGCCACCCCCGTCCTCTTCAACTAACCGGAGATCGCGCACGTGCTTCCCCGCTCGGCTTCGG | |||||||||
gi|88199639|gb|CI199489.1|CI199489 CI199489 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTGCCAAAATAAGACATACCAGTCGTACTTAAAATCATTCCAGATTACAGACTAGGGGCTGTTTGGTTTCCAGAGACTTATTCTAAGTCCCTGTCACATCGGATGTTTGGACACTAATTTGGAGTATTAAACATACACTAATTACATAACCCATTTCATAAGCTTGGACTAATTCGCGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTTGACAATGTGATGCTACAGTAAACTTTTGATAATTATGGATTAATTAGGCTTAAAAAATTCGTCTCGCGGATTAGCTCTCATTTATGAAATTAGTTTTTTTATTAGTCCATGTTTAATACTCTAAATTAGCGTCCAAACATCCGATGTGACATGGGTTAAGAAGTTGTAGCCCCATCTAAACACCCCCGTCTATAGGTACCCCATACAGACAACGTTCATTAAATCCAGGAATGCATCTTTCAAATAGTACAAAGCTACAGCAATCTAACATTCATC | |||||||||
gi|86490889|gb|CI133522.1|CI133522 CI133522 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage and Panicles two TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): TTTTTTTTAACGTCAAACATCCGATGTGACATAGACTAACAAGTTTTAGCCCCATCTAATCACCCCCTAAGCATATCATGCTGTTACAGTTGACACCATCACGCGATGTAACCAAGGGTGCACGCAACACACACCAACCTGTCATCGCTCACACTGCTGCTGTGCTGTGCTGCACTCTTCTCTCCTGGCCTTGGGGAATAAAACAAGGCGATCGGTTTGCTTTCGTCTTCCTCCCCTTCTCGCCATGCAAAGGGCGCTTTGGTTCTTGGTTTCTTCTTCCTTTTGCCTCAGAAATAATCACACCGGCATTGATGAACCAAGCATATGCAGGTACTACCTCAGAGAAAAAAAAAACTCCTTCGGGTAAGCTAGAATGGAAATGAAGTTCTGCGCTAGCGCTGCCGCGGCTGCACTGCTGCTACAGCAGCAGTGCCCTAACAAACTATAGTAAAAGCTTTTGAGCTGGAGCACCGGAAAG | |||||||||
gi|88272367|gb|CI386222.1|CI386222 CI386222 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TCTATGTCACATCGGATGTTT EST sequence (targeted fragment marked with yellow): GTCAAAATAAGACATACCAGTCGTACTTACAATCATTCCAGATTACAGACTAGGGGCTGTTTGGTTTCCAGAGACTTATTCTAAGTCCCTGTCACATCGGATGTTTGGACCCTAATTTGGAGTATTAAACATACACTAATTACATAACCCATTTCATAAGCTTGGACTAATTCGCGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTTGACAACTGTGATGCTACAGTAAACTTTTGATAATTATGGATTAATTAGGCTTAAAAAATTCGTCTGGCGGATTAGCCTCTCATTTATGAAATTAGTTTTTTTATTAGCTCCATGTTTAATACTCTAAATTAGCGTCCAAACATCCGATGTGACATGGGTTAAAAAGTTTTAGCCCCATCTAAACACCCCCGTTTATAGGTACCCGATACCAGAAGGCTCATTA | |||||||||