miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TCTCGGTTGGTGTTACCAACC
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|163927715|gb|EG712475.1|EG712475 Os5MPREST0055 Rice young panicles Oryza sativa Japonica Group cDNA clone 5MPR-A1E11S, mRNA s

TCTCGGTTGGTGTTACCAACC
||| |||||||. ||| ||||
AGACCCAACCATTATGATTGG

EST sequence (targeted fragment marked with yellow):
AGTTCTTCTCTCACTGGATTCACTCATTTCTTCTTCAATAGAAGCCACCATATTGGCTTGGGAGTTGTCAGGAAAATAGAAAAAGGGTAACAATAGACAACTCGAGGCATCACCGACTGCAAAAGTCGATCAAGCTTGCTGCGGTAGAACTAGAAGCCCTCACAAACTACTCAATCAAAAAAATATGTGGGCTGCATGTGAGATTTTAACTCAAGATCTCTCACTTCAACTTCACGCGCGATACCATCTTACCTAACACATACATTTGACTTGGATAAAGTCTTTTTAAAATAAACCCTGGAGGTATCTTTAGTCCAGGTTAGTATTACCAACCCAGATTAAAGATGCATCATTAGTCCTGGTTAGCGTTATGAACCTTGACTGATGATGTTTATAGTACTTTGGACTTTTACAGCATGTACTAAAGCATTTTTAGGTACCAATTCTTAAACCTGCTG



gi|29629679|gb|CB634688.1|CB634688 OSIIEb14F22.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb14F22 3', mRNA sequence

TCTCGGTTGGTGTTACCAACC
||.||||||||||||||||||
AGGGCCAACCACAATGGTTGG

EST sequence (targeted fragment marked with yellow):
ACAAAGTTTGATAATCCTATAGTCAGATATTACCCAAGAAACCTAATGAATTATGCTCACTTGGCTGGTTGTAAACAAATTATGTTCAATAGTACGCTGGTTGTAAACAAATAATTCTGGTCCCTAGGAGAAACAAAAGAATATTAATTTGCAGAATAAACCTATAATAACGTTGAAATATAATCGCTGGAGTAAGAGTATCAATTTGCAGAAGGTGCTGCTACATATGCATCTCTTGGTACGATTAATTCGGCGATTTCTCATAGGTAAGTATTGATTAGAGAAGCGGATAAAAAATTTCTCAATATGAATTAATGGTACTTCGATCACTATTAATTACTCCAGCCTCAAGTTACTAATTAAGGGGGGAGATCTACGCACAGCAGCCGATGTGTACTATTCATGTGATCATTAACACAGGGGGAGAAAGGGGTTTTACTCCCGGTTCGTAACCCCCTGTAGTCCCGGTTTCAACCAGGACTAGACTAAAGATCACTATCTTTAGTCCCTGATCTTTAGTCCCGGGTGAAAAAACCAGAAGTAAAAATCCATAAGATAGAGCCTTTTTAGTCCCGGTTGGTAACACCAACCGGGACTAAAGATAGAGCTAGCCTAGCTAGATCGGTTGCTTTATTTTCTTTTCTTCATTGTGTTTTTAATAATTTGATTTCGCTCCATCCCTATCCCAAAATCCCAAATAAATTATCCCCAAATCCTCAAATCCCCAAATCGGCCATATTCAAATAGATCACAAAATCTTAAAACAAAATTACATCACAACTTCTACAAAATTCATCACAAATACATCACATATTCACGCACATCACACACAAATCAAATACACATATCCAAATCACAAATTCT



gi|29668854|gb|CB665129.1|CB665129 OSJNEd11E20.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd11E20 3', mRNA sequence

TCTCGGTTGGTGTTACCAACC
||.||.|||||.||| ||||
AGGGCTAACCATAATATTTGG

EST sequence (targeted fragment marked with yellow):
TAAGGTAGGAGGAATGAATGTTTTAGGCCATTCGTGCATCCTTTGGGATATCAATATATATGATACCACGGAATACTCCTTGAAGTACTACATCGGTAATTTCACGTGCTTAGGAAACTTTTTTGTAGGAGCATTAGAAATACCAATACCTACAAAGTTGTTTATATTAAAGGGTTAATTGATATTCATATATCAGTTACTATTACTAAAAAAGAACTTACTAATGTACAATATATGTAAATAAGTTACTCCCAATTTGATGCAAGACCTAGATTCATCAAACATATCACCATCCCTACTAAATGCATTATGTAACATACACATGTCGTTTACTTTGACGAGTTTTTTTTTCCACATACCTATTAATTTTCACAGACCTCGCCGACGGGGCCGNTGCCCCCTCCCCCACCGCAGCTGGCGCCGCGTCTCCCCCTCCTGGTCACGCCGTCGCCGACAGAGAGGGGAGGGGAGGGGGAGGAGGAGGAGGAAGGGTAGGGGAGGACGCATCTGGAGGGAGAGGAGGAGACGCAAATGACTTAAAAAGGCGTGGAGATATCGAGGAGATAAGGGCGGGGAGGCGCACACGTGCGACCCGGCGTGTTTTTTCGGATTTGTAGTCCCAGTTGGTGCTACCAATCGGGACTAAAGTGATGATATTTAATTCCGGTTTATAATACCAATCGGGACTAAAGATCCTTGGGGCCTGACACGGCCTATCAACTTTTTGAAGCGGGCCAAAAAAAAAAAAAAAGAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAGCTTTTGT



gi|88694693|gb|CI738731.1|CI738731 CI738731 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TCTCGGTTGGTGTTACCAACC
||.||||||||||||||||||
AGGGCCAACCACAATGGTTGG

EST sequence (targeted fragment marked with yellow):
GTTAAAAAGGGTAACGGACATATTTGATCTTTACTCGGGCATATTTGATCTTTAGTCCCGGTTGGTAACACCAACCGGGACTAAAGATCATCTTTAGCCCCGGTTTTTATTGCAACCAGGACTATTGTGGAATTCGGCCGACCGACGAAAGATGGTTTCTCCACCAGTGGTTATGATTCTTCTGTTTGGAAAGAAAATATAAAAAAGATTATACGAAGGTTCAAAAAAAACTCGTTATTAATCCGATGCTAGATAAACCTTAGGTCAGTGTCACGTATACGAAGAGGGTGAAATGCGATGAGCCTCATCAATTTTATGCCTACAAGAATAATGCATGT



gi|29623965|gb|CB628976.1|CB628976 OSIIEb04N19.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb04N19 3', mRNA sequence

TCTCGGTTGGTGTTACCAACC
||.||||||||||||||||||
AGGGCCAACCACAATGGTTGG

EST sequence (targeted fragment marked with yellow):
AGATGCAGCAACTGGTACACGGGCGTCATTTACAGCAGATGCAGCAAATGGTACGCGAGCGTCAGCAACTGGAGGAACGCGAGCGTCAGCAACTGGAGGAACGCGATCGCTACGAGCGCTGGTGGATGCGGGAACCCTTTGCAGTCCCGGTTTCTAACCCCCTTTAGTCCCGGTTTTGAAACCGGGAGTACCAATCCGGGACTAAAGATCGCTATCTTTAGTCCCGGGTGAAATAACCGGGGCTAAAAATCGATCTTTAGTCCCGGTTGGTAACACCAACCGGGACTAAAGATCGAGCTGACCTTTTTTTTTTTGCATGGCCCTGTTGCTGCATATATATGTTTCAATACATATATATGCATACATATATATATATATATGTATATATATATATTATATTATATTATATGTATATACATGCATAATATATATGTATTTATACATATATATGTTATGCAAATGCATATGTACTGTATATAGATATATATATGACCAAAATATATTTACATTATAGAAAATGTGTACACATGCATATAGAAACATATGTAGTCATGTATTAATTACAATCCATTATATGTCCTAGCTAGCTACGATTTCGACGTAGTAGTACTCGCTGCTAGCTCAGAAGCTAAGGACCGGTGAATTGTGTTTCCGTCGTAGTAGAATTCACCCTTGGGATCAAGGATTTCTTCGTTGATGAATCCCATGAGTTGTTCTTGAACCGCCGCGATAAATTCCTTGTGTGTGGTCAGGTTATCCCTCATGCAAATAAACTATATGAATGTATGAAATTGATTAGTAATGAAGCAAGAAATTGCTACGTAATGAAATTTTGAATTTAAAAAAAAG



gi|88483895|gb|CI421166.1|CI421166 CI421166 Oryza sativa (japonica cultivar-group) 4th leaf leaf 1mM ACC(1-aminocyclopropane-1-c

TCTCGGTTGGTGTTACCAACC
||.|.|||||||.|||||| |
AGGGTCAACCACGATGGTTAG

EST sequence (targeted fragment marked with yellow):
GTTGGTAAGATCATTTTTTTTGTCCCGCTTCAAAAAGTTGATAGGCCGTGTCAGGCCCCAAGGATCTTTAGTCCCGATTGGTATTATAAACCGGAATTAAATATCATCACTTTAGTCCCGATTGGTAGCACCAACTGGGACTACAAATCCGAAAAAACACGCCGGGTCGCACGTGTGCGCCTCCCCGCCCTTATCTCCTCGATATCTCCACGCCTTTTTAAGTCATTTGCGTCTCCTCCTCTCCCTCCAGATGCGTCCTCCCCTACCCTTCCTCCTCCTCCTCCCCCTCCCCTCCCCTCTCTGTCGGCGACGGCGTGACCAGGAGGGGGAGACGCGGCGCCAGCTGCGGTGGGGGAGGGGGCAGCGGCCCCGTCGGCGAGGTCTGTGAAAATTAATAGGTATGTGGAAAAAAAAA



gi|88721289|gb|CI744588.1|CI744588 CI744588 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TCTCGGTTGGTGTTACCAACC
||.||||||||. .|||||||
AGGGCCAACCATTGTGGTTGG

EST sequence (targeted fragment marked with yellow):
GTTAAAAATGAGAGGAGGAGATAAGGTTGAGGAGGAGAGAGGAGTTAAAGGAGAGGAGGAGGTACCTCGATCCGATCGTGCACACCTCTCCGATCTCCGCGTCGATCTTTACTCCCGGTTGGTTTTACCAACCGGGACTATAAATAGATCTTTAGTCCCGGTTGGTGTTACCAACCGGGAGTAAAGCGTATGGCGATCTTTTTTCCCGGTTGATGTTATCAATCAGGACTACAAATAGATCTTTAGTCCCGGTTGGTAACACCAACCGGTACTAAAGATTGAAAAGTATCCTGTAGCTTTTAAACCGGGACTAAAGATATTTTTAGTCCTGGTTTTTAATACAACCGGGACTATTGTAAAATCTGG



gi|88330140|gb|CI658443.1|CI658443 CI658443 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TCTCGGTTGGTGTTACCAACC
||.||||||||.|||||||||
AGGGCCAACCATAATGGTTGG

EST sequence (targeted fragment marked with yellow):
GGTTGGTAATACCAACCGGGACTATAGATCTCGGGGATCTTTAGCCCCGGTTGGTAACACGAACTGGGACTAAAGTCCCACCCCTATATATATGTCTTCTTCCTCCTCCAGTTGCCCGAGCAAGCTTCAAAATTTCTTCAAAAAAGAGGGGAGGTCATGCCAAAATTTCTAGTGAATTTATTTTGGTGATTACATACAAATCGGAGGTGCCTAAAAGATGGATTGGCAATAGATGTACCCTGACCGGCGGTCCACAGAGTTTATTGACGGCGTGCACTATTTTTTGAGAGTGGCCGAAGCTAACAGGCAAAGGGGTTTTATTTGTTGTCCATGCAATAAGTGTAAGAATCAGAAGGCTAGTGGAAGTCAACCCTCCGTTGGACAGAAGAGGGCATGC



gi|88555731|gb|CI486009.1|CI486009 CI486009 Oryza sativa (japonica cultivar-group) 15 days after pollination pistil Oryza sativa

TCTCGGTTGGTGTTACCAACC
||.||||||||. .|||||||
AGGGCCAACCATTGTGGTTGG

EST sequence (targeted fragment marked with yellow):
CGGGAGAAAATACATAGATTAACACTAGCCATTAGCAAATCAACAACAAAATAATAATAAAAAAAATCTCGAGGAACTGTCGCTTCCCCTCTTTAGTCCCGGTTGGTAGATTCCCTCTCTTTACTCCCGGTTGGTGTTACCAACCGGGACTATTATTTGAACCGGGACTAAAGATAGCGATCTTTAGTCCCGGATTCGTAGTCCCGGTTGGAAAACCGGGACTAAAGGGGGGTTATCAACCGGGACTACAAACGGTTTCTCCACCAGTGTGAGATGCACACGATAGTATGCATCATACACTTGTTATTTGACTATACAAGTAATTGAAATTCGATCAACAACAACCATAAGGAAAGAGTTGAAAGTTGGCGGGTGCCATGTTGCACACATATGGCAGTTGCAT



gi|88721289|gb|CI744588.1|CI744588 CI744588 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TCTCGGTTGGTGTTACCAACC
||.||||||||. |||||||
AGGGCCAACCATTTTGGTTGG

EST sequence (targeted fragment marked with yellow):
GTTAAAAATGAGAGGAGGAGATAAGGTTGAGGAGGAGAGAGGAGTTAAAGGAGAGGAGGAGGTACCTCGATCCGATCGTGCACACCTCTCCGATCTCCGCGTCGATCTTTACTCCCGGTTGGTTTTACCAACCGGGACTATAAATAGATCTTTAGTCCCGGTTGGTGTTACCAACCGGGAGTAAAGCGTATGGCGATCTTTTTTCCCGGTTGATGTTATCAATCAGGACTACAAATAGATCTTTAGTCCCGGTTGGTAACACCAACCGGTACTAAAGATTGAAAAGTATCCTGTAGCTTTTAAACCGGGACTAAAGATATTTTTAGTCCTGGTTTTTAATACAACCGGGACTATTGTAAAATCTGG



gi|29624641|gb|CB629652.1|CB629652 OSIIEb06B02.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb06B02 5', mRNA sequence

TCTCGGTTGGTGTTACCAACC
||.||||||||. .|||||||
AGGGCCAACCATTGTGGTTGG

EST sequence (targeted fragment marked with yellow):
TGGAGGAAGAGGCGTAGAGATAAGGCTGCCCGTTTCCTCCTCCTCCTCGATCTCGTAGATGGCAGATGCCTCGTACTCTCCGCCACGATCTTTTGTTCTGGTTGGTAATACCAACCGGGACTAAAGATAGTAGGCATCTTTTTTCCCGGTTGGTGTTACCAACCGGGACTAAAAATAGCCAACGGGGACTAAAGATTAAAAAGCAGCTCTAAACTTTTGAACTGGGGCTAAAGATAATCTTTAATCCCGGTTTTTATTGCAACCGGGACTATCGTGGATTTTGGCCGACTGAGCAAATATGGTTTCTCCACCAGTGTAAATTCGGAACGTAACTTTTAATTTAGAAGTGAAGATATTATTAGCTTTACAGCACGGCATCAGCGAAATGACAGCAATATTAGTTTTATCAAGGCGAAATCGTACAAGTTATTGGGGTATCTATTTGTAAACTGGATTATCTTTTATATATTATCTACCAGTCACTTTTTAACTTCTAAATAACAATATTTACGTGCCAAACTTTTTTTTCGGATGAGACACATATACTGTGTTATAACTTTTTATTTTTTTAAAAAAAATACACTTCAGTGTAGATCTTACGAACATTAACAACTTATAATATATTTAGATTAATCCAGTAGAAGTATGGTAATGAAAATTAAAAGTCATACTAAATGTGTAGTTTTTCGGATTGTACAGTTCAGTTGAGTCGGTTAAGAAAAAAATTGAAGCAATTAATTGATAGATATATAGAGTGATTGCCATGTGCTTTGCCATCTCAGTGCATGCTGATTCATACGCCAATATCTAACTGATCGTCGGCATGCTGGACCAAT



gi|66927267|gb|CX114115.1|CX114115 EI085N23 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

TCTCGGTTGGTGTTACCAACC
||.||||||||. .|||||||
AGGGCCAACCATTGTGGTTGG

EST sequence (targeted fragment marked with yellow):
TAGTGATTAGTATTACTGGGTAAAGCATTACTCTTTTTTTTTTTTTGTTCATACACCACCCTCCAAAGTTTTATCTACATCCAACATGTGGAATGTGACATTTTGAAATTAATTTCACGTTCATTTTTATCCAAAAGGACACATATTTTGAATAATAACGCATGTGCTACTAGTCGTAGACGTGGAATGCACAATACATAATAATTAAATATTCAAAATTTATGAGCCAATATTACGTATTAACAAATAGATCTCTTCCAGGCACTACACATAGAAAATATTGAAAACACTGGTGGAGAAACCATCTTTGGTCGGTCGGCCGAAATCCACAATAGTCCCGGTTCCACTAAAAACCGGGACTAAAGATGATCTTTAGTCCCAGTTCTAAAGGTTAGAGCTACTTTTTGATCTTTAGTCTGGGTTGGTAACATCAATCGAGACTAAAGATCATTTTTAGTCTTGGTTTAAAAGACGGCAGGTGGTGTCAGACTCCTCCTTTATCTTTAGTCACGGTTGGTGTTACCAACCGGGAAAAAAGATCGACATGCACGGTGCGAGATCGAGAGGACCGAGGCGCACGGGAGGATCAGTTAATAAGTTCCGACCTTTATCTCCTCCTCTCCGAACTCACCCCATCTCTTCCTCTTCCTCCTCTCCACACTCACTCCCATCTCTTCCTCTTCCTCCTCTCATCTCTTCCTCTGATCCGTCTCCTTCCCTCTNCCTCCCAATTCTCAATCTCCTCTGGATCCAACCCTCCCGTCTCCACCCGAATTCTCAAGAAGCGGCGGCCGG



gi|88694009|gb|CI738047.1|CI738047 CI738047 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TCTCGGTTGGTGTTACCAACC
||.||||||||. . ||||||
AGGGCCAACCATTGAGGTTGG

EST sequence (targeted fragment marked with yellow):
GGTGGATTTGGGATGTTAATTTGATTTGGGATTTGGGGATATGCATGCCACTTAATTCGGGAGAAAATAAAAAAGAAAAAAAAGAAAGATGACCATCTGTACTGCTGTTATTCCCTCTTTAGTCTCGGTTGGTAGACCTTATCTTTAGTTCCGGTTGGAGTTACCAACCGGGACTAAAGATCGATCTTTTGTCCCGGTTATTTCACCCGGGACTAAAGATAGCGATCTTTAGTCCCGGATTCGTAGTCCCGGTTGTCCGGGGTTACGAACCGGGACTAAAAAGCATTTCTCCACCAGTGATGGAAAAGTTAAAGTTCGGAGAACTGGGCCAAGCAGCATATGGAGGCGTCGTC



gi|44666291|gb|CR279725.1|CR279725 CR279725 Oryza sativa library (Han B) Oryza sativa cDNA clone y870g04p5, mRNA sequence

TCTCGGTTGGTGTTACCAACC
| ||||||||||.||| | ||
AAAGCCAACCACGATGTTCGG

EST sequence (targeted fragment marked with yellow):
TTTCGGCATTATCGNCGGGATGACTCTTGGTGAGATTGCAGGGTCAAGCTGAGTATATTGTGAACCAAAAGGGAGCATTAAGAGCTGAAGAGGGTCATGAATCCAGTCGTTCAGATTCTGTCTCAACACGACCCAAGCATGTGGTTGTTGGATTTGTAGGCTATCCAAATGTTGGGAAGAGTTCAACCATCAATGCTTTGGTTGGCCAGAAGAGAACTGGTGTAACCTCTACACCTGGCAAGACCAAGCATTTTCAGACATTGGTAATCTCAGAAGAACTCATTCTCTGTGATTGTCCAGGTCTGGTCTTCCCTTCCTTTTCAAGCTCAAGGCATGAGATGGTAGCCTGTGGTGTCTTGCCAATTGATAGGATGACAAAGCATAGGGGCGCTATTCAAGTGGTGGCAAATCGTGTGCCACGAAATGTTCTAGAACAGATTTATAAAATCACCCTGCCAAAGCCCAAGGCATATGAACAACTGTCCCGACCACCAACTGCCGCTGAGTTGCTGCGGGCGTACTGCACATCTCGAGGGCATGTCAGTCATGCTGGGCTGCCTGATGAGACTAGGGCTGCTAGCAAGATTTCTGAACCATCCCTCAACGGAAGAACCAAAATTAGAGGTAACCCGGGGACAACATACTCGAAAGGGCAGCGGGAAACAAGGACTACAAGCCCATAACGCAACAGGGCCCAAGGAAACGGGCTTGTAGCACCAACCGAAACAAACCGGACACAAACAGGACAAACACGGACCACACGGCCCAA



gi|88729868|gb|CI753089.1|CI753089 CI753089 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TCTCGGTTGGTGTTACCAACC
||.|.||||||.|||||||||
AGGGTCAACCATAATGGTTGG

EST sequence (targeted fragment marked with yellow):
TTAGTCCCGGTTGGTTACTAAAGATCCTAACTTTACTCCCGGTTGGTGTGATCCCCGGGATCTTTAGTCCCGGTTGGTAACATCTTTAGTCCCGGTTGGTAATACCAACTGGGACTAAAAATCCCCCTTTATATATGTCTTCTTCCTTCTCCAGCCCGAGCAAGCTTTAAAATTTCTCAAAGAAAGAGGGGAGGTCATGCCAAAATTTCTTGTGAAATTTTTCTAGTGATTATATACAAATCGGAGGTGTCTAAAAGGTTAGTAACTTCATCCTCCAATATTTTTTGTCGTTATATTACTTTTGGAGCTATGTTTCAGACATTTTTTTTGTCTCCAAAACTTTGGTGTAAGTTGATGAGAGAGAAAATTCGTGTGGGGAAGAAG



gi|88724795|gb|CI748054.1|CI748054 CI748054 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TCTCGGTTGGTGTTACCAACC
||.||||||||||||||||||
AGGGCCAACCACAATGGTTGG

EST sequence (targeted fragment marked with yellow):
GTTAAAAAGGGTAACGGACATATTTGATCTTTACTCGGGCATATTTGATCTTTAGTCCCGGTTGGTAACACCAACCGGGACTAAAGATCATCTTCAGCCCCGGTTTTCATTGCAACCAGGACTATTGTGGAATTCGGCCGACCGACCAAAGATGGTCTCTCCACCAGTGGTTATGATTCTCCTGTCTGGAAAGAAAATATAAAAAAGATTATACGAAGGTTCAAAAAAAACTCGTTATTAATCCGATGCTAGATAAACCTTAGGTCAGTGTCCCGTATACGAAGAGGGTGAAATGCGATGAGCCTCATCAATTTTATGCCTACAAGAATAATGCATGTGTATGTGCA



gi|88724251|gb|CI747510.1|CI747510 CI747510 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TCTCGGTTGGTGTTACCAACC
||.||||||||. |||||||
AGGGCCAACCATTATGGTTGA

EST sequence (targeted fragment marked with yellow):
TAAATTATTTTATACCAAATGCTTACAAGAGACAGCAAAAACAGTTTAAATCTATATTTCTAATCACTGGTGGAGAAACCAATCTTTGGTCGGTCGGCCGAAATCCACAATAGTCCCGATTCCACTAAAAACCGGGACTAAAGATGATCTTTAGTCCTGGTTGGTGGCTACAGTGGGCATATTTGATCTTTAGTCCCGGTTGGCACCAACCGGGACTAAAGATGATCTTTAGTCTCGGTTCTAAACCTGTTAGTCCTTGTCAGGCCCCCAACTTTACTCCCGGTTGGTGTTATAAACCTGGACTAAAGATCTAGAAGATTTTTAATCCCAGTTGGTATTACCAACCGGGACTAAAATTCAANGCTTA



gi|29624641|gb|CB629652.1|CB629652 OSIIEb06B02.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb06B02 5', mRNA sequence

TCTCGGTTGGTGTTACCAACC
||.||||||||.|||||||||
AGGGCCAACCATAATGGTTGG

EST sequence (targeted fragment marked with yellow):
TGGAGGAAGAGGCGTAGAGATAAGGCTGCCCGTTTCCTCCTCCTCCTCGATCTCGTAGATGGCAGATGCCTCGTACTCTCCGCCACGATCTTTTGTTCTGGTTGGTAATACCAACCGGGACTAAAGATAGTAGGCATCTTTTTTCCCGGTTGGTGTTACCAACCGGGACTAAAAATAGCCAACGGGGACTAAAGATTAAAAAGCAGCTCTAAACTTTTGAACTGGGGCTAAAGATAATCTTTAATCCCGGTTTTTATTGCAACCGGGACTATCGTGGATTTTGGCCGACTGAGCAAATATGGTTTCTCCACCAGTGTAAATTCGGAACGTAACTTTTAATTTAGAAGTGAAGATATTATTAGCTTTACAGCACGGCATCAGCGAAATGACAGCAATATTAGTTTTATCAAGGCGAAATCGTACAAGTTATTGGGGTATCTATTTGTAAACTGGATTATCTTTTATATATTATCTACCAGTCACTTTTTAACTTCTAAATAACAATATTTACGTGCCAAACTTTTTTTTCGGATGAGACACATATACTGTGTTATAACTTTTTATTTTTTTAAAAAAAATACACTTCAGTGTAGATCTTACGAACATTAACAACTTATAATATATTTAGATTAATCCAGTAGAAGTATGGTAATGAAAATTAAAAGTCATACTAAATGTGTAGTTTTTCGGATTGTACAGTTCAGTTGAGTCGGTTAAGAAAAAAATTGAAGCAATTAATTGATAGATATATAGAGTGATTGCCATGTGCTTTGCCATCTCAGTGCATGCTGATTCATACGCCAATATCTAACTGATCGTCGGCATGCTGGACCAAT