| mature miRNA: TCTTCTCTATTCCTCCCATTC species: Picea glauca database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|211892522|gb|CO484844.2|CO484844 GQ0208.TB_O16 GQ020: Clean ROOTS systems -Diurnal cycle Picea glauca cDNA clone GQ0208_O16 3 TCTTCTCTATTCCTCCCATTC EST sequence (targeted fragment marked with yellow): GCTTTGCAGAATCGGAGAAAGAGAGAAGACAAGCGGCTGTCTTCAACAAAGCGACTTGCAGTTCTCACAGGAGAATCGTAGCCATGTCTGGGAGGAAGAAGGTTCGAGAGCCCAAAGAGGAGACTGTTACACTAGGTCCTACTGTTCGAGAGAATGAGCAGGTGTTTGGAGTGGCGCACATATTTGCATCCTTCAATGACACCTTTGTGCATGTGACTGATCTCTCTGGGAAGGAAACAATGGCACGGGTAACTGGGGGTATGAAGGTTAAGGCTGATAGAGACGAATCTTCCCCCTATGCTGCTATGCTAGCAGCACAGGATGTTGCACAGAGATGCAAGGAGCTTGGTATAACTGCCTTGCATATTAAGCTTCGTGCAACAGGAGGGAATAAAACAAAGACGCCTGGGCCTGGAGCACAGTCTGCTCTTCGTGCTCTTGCACGTTCTGGCTTGAAGATTGGTCGTATAGAGGATGTGACTCCAATCCCCACTGACAGCACTAGAAGAAAGGGTGGACGAAGAGGAAGAAGGCTGTAGGGTGCACTTTGGGTGCTCTATCTCGAAAGTGCTGATTTTGATTTATGGTATAAGAAAGGGTGGACGAAGAGGAAGAAGGTTGTAGGGTGCACTTTAAGGTGCTGATTTTGTTTCATGGTATTATTATTTTAGTTATTGCAGGACTTTTGCTAAGAAATACAATGTTTAGAGGGGTTGTCATGGAATATTAAAATTGTTTTTTTAACCAAAAAATCCAACTTTTAAAAAACAATGAGGTAGGCAAACTAAGCAAATTACTATTTTGGAGGCAGAGTGGGCTTTATATATT | |||||||||
gi|255779374|gb|GR953561.1|GR953561 GQ02802.B7P1_F19 GQ028 - Cambium / phloem scrappings (Normalized library ) Picea glauca cDNA TCTTCTCTATTCCTCCCATTC EST sequence (targeted fragment marked with yellow): GGAAGGTACGGTATATTGGTGTTTCTAATGAAACATCTTATGGAGTTATGGAGTTTGTTAATGCTGCAAAGCTGGAAGGTTTACCAAAGATCATCAGTATACAAAACAGTTACAGTTTGCTAGTACGGTGTCATTTTGAAGTTGATCTGATGGAGGTGTGCATGCCTCAAAATTCTAATGTTGGTCTATTGGCATATTCTCCATTGGCTGGTGGGGCTTTGACTGGGAAGTATACAAATCCTGATTATATAGCAGCAAAGAAAGGGAGGTTTAATCTCTTTCCAGGATACATGAGTCGCTATAATAGTTCTTTGGCTAAGGAAGCTACTGAAAAGTATATTCAATTGGCATATCAACATGACCTTACCCCTGTTCAAATTGCACTTGGTTTCATACGTGATCGCCCATTTGTGACAAGCACAATTATTGGTGCAACATCCATGGAGCAGCTTAAGGAAAATATTTCTGCTTTCACTGCAACCAGGCCCTTATATCCAGAAGTTATGGAAGGAATAGAGAAGATATTTTCCAGATACAGAGATCCAGCAATGACATAGTTTTTCACTCAAAGGATTGTTTTTTAATGTCCAGTTTGAAAACCCAGGCAATGACACAAAACACATTCCAGATAAAACATTCTTCTTATTCAACATGGGATCCGACTTTCCAATGTGTGTATTTCCTGTTGAATTTAGGTTGGACCTTGGTTGTGCAAATTTATGTGCTTGATTTGATCAGAAAATGCCATATCTCTTGGTAAGACCACATCCATATTTCAAAATATTTTATTTACCATTTGTAAAGAAACTGTGGGAGGGCATATACATCA | |||||||||