| mature miRNA: TGAAGAAGACTTGGAGCTTCGA species: Picea glauca database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|211864614|gb|DV970733.2|DV970733 GQ0046.TB_N09 GQ004: Non-lignified secondary xylem from mature trees Picea glauca cDNA clone TGAAGAAGACTTGGAGCTTCGA EST sequence (targeted fragment marked with yellow): CAGTATGTGGGTTCATGTTAGTAATGATTTTAATGGCGAATTATGTCCATGGCAACGAGTTCTGGCCTGCTCAGGATCAGAACCATAATCAGCAGCGTAGTCCCGTTAGTCGGGTGAGATTCAGTCATGGTCAGTATATAGATAATCATCTTGAGCATTTGGATCATTCTACAATGATTTCTTACAACAACAAGATAACTATCAGAAGGCTCTTGGTGGAGAGAATCATATAAGTAAAATTGCAGATCCAGTTTATGTATGGTTTGATCTGGTTGAAAATATATTTTTACTATCAATGTGAAGGCTCTTGGTGGAGAGAATCATATAAGTAAAATTGCAGATCCAGTCTATGTATGGTTTGATCTGGTTGAAAATATATTTTTACTATCAATGTGCAGTACAGTTAGTTTTCAGAGATAGTTTGTAATTTGTGTAGCAGCTTCAAGTCCTCTTGAAGTGTTCTCTGCTATCAAAATTCTATCTTTGAATGTATCAATTTGCTTTTGCTTTTGGGTTGAATTGAACGTTTTAACTTCATATGGATGGCCAGCATTGAGTTCTAGACTCTGATTTTTCTTTTGAGTTGGATTGAACGTTTAGACTTAATATGGGTTGGTCAGCATTGGGTGTACAGTTAGTTTTCAGAGATAATCAATGTGTTGTACAGTTAGTTTTCAGAGATAGTTTGTAATTTGTGTAGCAGCTTCAAGTCTTCTTGAAGTGGTCTCTGCTATCAAAATTC | |||||||||
gi|270051893|gb|GT739963.1|GT739963 GQ0186.B7P4_F11 GQ018: Clean ROOTS systems - N treatments Picea glauca cDNA clone GQ0186_F11 TGAAGAAGACTTGGAGCTTCGA EST sequence (targeted fragment marked with yellow): ATCTCATCGAATGCTTCCGTTGAGCTACCGATCTGAGTGTTGCAGGATTTGGCTGTGAGGTCGACGAGAATGGAGATGGAGAAAATGTTTCATATGAACGCCGGCCTCGGAGACTCCAGCTATGCTCAGAATTCCACTATCTTACAGAAGAGGGCATTAGACCTGGTAGAGCCTATGTTGGAGGAAAGCATTTTATCCATGAAAATGATGGAATGCAAAACATTTTGCATCGCAGAGCTGGGTTGTTCGTCTGGACCTAATGCTCTCTTGGGTACTGAAAATATTATAAAGGTTCTCGAAGCCAAATATTTGTCAGCGGGCAATCCTGTTCCGCAGTTCCAAGTATTCTTCAATGATCTTCCTTCGACTGATTTCAATTCGCTCTTTAGGACCCTGCCTCCCTCAGTAGTGACTGATGGGAATTACCCGGCTAGATCATATTTCTCAGCAGGAGTACCGGGGTCATTCTACGGAAGGCTATTTCCAGACAAGAGTCTTCATTTCGTTCATTCTTCGTACAGTCTTCACTGGCTTTCTCAGGTTCCCTCTGAGGTTTTAGAAAAGAATTCAGTGACATGGAACAAGGGCAAAATCTCTGCCGGAGGATCTCCCACTGTTGGACAAGCTTATTTTCGTCAATATCAGAAGGATTTCAACGCGTTTCTGAAAGCCCGGGCAGAGGAGATGGTTCGGGGAGGCCGCATGTTTTTGCTGTTAACGGGTCGAACATCTCGCGATCCAAATGATCAGGGTTTCATTGCC | |||||||||
gi|211902706|gb|CK435907.2|CK435907 GQ0041.TB_P03 GQ004: Non-lignified secondary xylem from mature trees Picea glauca cDNA clone TGAAGAAGACTTGGAGCTTCGA EST sequence (targeted fragment marked with yellow): ATTCAGTCATGGTCAGTATAGAGATAATCATCTTGAGCATTTGGATCATTCTACAATGATTTCTTACAACAACAAGATAACTATCAGAAGGCTCTTGGTGGAGAGAATCATATAAGTAAAATTGCAGATCCAGTTTATGTATGGTTTGATCTGGTTGAAAATATATTTTTACTATCAATGTGAAGGCTCTTGGTGGAGAGAATCATATAAGTAAAATTGCAGATCCAGTCTATGTATGGTTTGATCTGGTTGAAAATATATTTTTACTATCAATGTGCTGTACAGTTAGTTTTCAGAGATAGTTTATAATTTGTGTAGCAGCTTCAAGTCCTCTTGAAGTGGTCTCTGCTATCAAAATTCTATCTTTGAATGTATCAATTTGCTTTTGCTGTTGGGTTGAATTGAACGTTTTAACTTCATATGGATGGCCAGCATTGGGTTCTAGACTCTGATTTTTCTTTTGAGTTGGATTGAACGTTTAGACTTAATATGGATTGGTCAGCATTGGGTGTACAGTTAGTTTTCAGAGATAATCAATGTGTTGTACAGTTAGTTTTCAGAGATAGTTTGTAATTTGTGTAGCAGCTTCAAGTCTTCTTGAAGTGGTCTCTGCTATCAAAATTCTATCTTTGAATGTATCAATTTGCTTTTCTT | |||||||||