| mature miRNA: TGAAGCTGCCAGCATGATCT species: Phaseolus coccineus database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|207578523|gb|GD561825.1|GD561825 454PCS0189516 Scarlet Runner Bean globular-stage suspensor region size-fractionated Phaseolu TGAAGCTGCCAGCATGATCT EST sequence (targeted fragment marked with yellow): TGGCCGGGGGAGGAGTCATGTTGGCAGTTTTACTTGCTACCACATCATGGAACGGGTACGTGTTGCTGTTGTTGCCTATGGAACCAATGAATGAATACCTGTAACTA | |||||||||
gi|27403392|gb|CA916400.1|CA916400 PCSC13501 Scarlet Runner Bean Suspensor Region TriplEx2 Phaseolus coccineus cDNA 5' similar t TGAAGCTGCCAGCATGATCT EST sequence (targeted fragment marked with yellow): GATCCAAACCCTAGCTAGCAAAGGCAGCAGTTAAAACCTCCCTTCAATTCCCAATCTCATCGTCATCACCTTTTACAACCCTTCTTCTTCTTCTTCTTTCCAATAATTATCTAACATCATGCACCACTACCAGTTGAAGCTGCCAGCATGATCTTAACTTCCCTCACTTGGTTGAGGAGAGATCAGATCATGTGGCAGTTTCACCTAGTTGTTGGCCGCATGAACCCTAGTTCTCACTCCCTCTATTTTGTGTTTAATTATGTCTATGATTTTCTTTGATTGT | |||||||||
gi|207159479|gb|GD313440.1|GD313440 454PCEP0023596 Scarlet Runner Bean globular-stage embryo-proper regions Phaseolus coccineus TGAAGCTGCCAGCATGATCT EST sequence (targeted fragment marked with yellow): TTGACGTAACCTAACCAGTTGACGAGCTAAGATTTTGGTGGCAGCTTCATTTCCTGTTTTTGCTTCTCTCTTAATTTCTGCAACCAATTTTTT | |||||||||
gi|207271939|gb|GD426985.1|GD426985 454PCS0054676 Scarlet Runner Bean globular-stage suspensor region Phaseolus coccineus cDNA, TGAAGCTGCCAGCATGATCT EST sequence (targeted fragment marked with yellow): GGAGGAGAGATCAGATCATGTGGCAGTTTCACCTAGTTGTTGGCCGCATGAA | |||||||||
gi|207280781|gb|GD434748.1|GD434748 454PCS0062439 Scarlet Runner Bean globular-stage suspensor region Phaseolus coccineus cDNA, TGAAGCTGCCAGCATGATCT EST sequence (targeted fragment marked with yellow): ATGTCAACCACATACCTGCCATTTGTTCTTTCACTACTATTACTAGGATCAGCCACCCTAACCCTGGCTTGTGCTGACAGCTTCAATTCTT | |||||||||
gi|207176350|gb|GD330250.1|GD330250 454PCEP0040406 Scarlet Runner Bean globular-stage embryo-proper regions Phaseolus coccineus TGAAGCTGCCAGCATGATCT EST sequence (targeted fragment marked with yellow): GTGATAATGTTGGCAGCTTCACTGTGTTGTTCTGCCTCAAACTTTGTATACATCTT | |||||||||