| mature miRNA: TGAAGCTGCCAGCATGATCTA species: Glycine max database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|193541566|gb|FK499220.1|FK499220 454GmaGlobSeed233852 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAAGCTGCCAGCATGATCTA EST sequence (targeted fragment marked with yellow): GACCCTCTTAGATCAGGCTGGCAGCTTGTATTCGTTGACAGGGAGAACGATGTTCTTCTCCTTGGAGACGATCCGTGGGAATCATTTGTCAATAATGTATGGTATATCAAAATACTTTCACCTGAAGATATCCATAAAATGGGAGAACAAGCCGTGGAATCCCTTGGTCCAAGTTCAGGACATAGGCTGAATAGCACTGGTGCAGATTCTCACGAAATTGTTTCTGGACTTCCATCAATTGGCTCCCTTGAA | |||||||||
gi|207717578|gb|GD699164.1|GD699164 454GmaGlobSeed441813 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAAGCTGCCAGCATGATCTA EST sequence (targeted fragment marked with yellow): TGCTGCTTCTTGTCACTTTCAGACGTGCCTTCCTACCCTTTCCCATGCACTTCTCCAAATGTGGAGCAAACCTTCCAGCCATGATGGATCGACCACAATTCAAACAATCAAATATTTCATTTGCCACAGGAGGATGAGTTTGTCCAAATATGTCAACCACATACTTGCCATTTGCTTCATTACTGTTACTAGGATCAGCCACCCTAACCCTGGCTTGTGCTGACAGCTTCAATTCTTCAT | |||||||||
gi|193471455|gb|FK436556.1|FK436556 454GmaGlobSeed171188 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAAGCTGCCAGCATGATCTA EST sequence (targeted fragment marked with yellow): GCTTCTTGTCACTTTCAGACGTGCCTTCCTACCCTTTCCCATGCACTTCTCCAAATGTGGAGCAAACCTTCCAGCCATGATGGATCGACCACAATTCAAACAATCAAATATTTCATTTGCCACAGGAGGATGAGTTTGTCCAAATATGTCAACCACATACTTGCCATTTGCTTCATTACTGTTACTAGGATCAGCCACCCTAACCCTGGCTTGTGCTGACAGCTTCAATTCTTCATCCTCTTCTTA | |||||||||
gi|193359198|gb|FK325823.1|FK325823 454GmaGlobSeed60455 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA s TGAAGCTGCCAGCATGATCTA EST sequence (targeted fragment marked with yellow): TTCATTACTGTTACTAGGATCAGCCACCCTAACCCCTGGCTTGTGCTGACAGCTTCAATTCTTCATCCTCTTCTTCCAAATTTGAATCAAGCCCCGGCCGTAATGGCCACTCTGCGTTGATACCACTGATGAAAGGGGAATTTTAAAAGAAGCAAACTTGGATAGGAAAATCCCCTCATCTTTAAAAGAAACCACCGTTAAAGGTAGTGAGTCCAAGGCAATGAGGAAATATCAGAATGCGAAGCGAACAAGTGAACTTG | |||||||||
gi|207769945|gb|GD741811.1|GD741811 454GmaGlobSeed484460 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAAGCTGCCAGCATGATCTA EST sequence (targeted fragment marked with yellow): GTGGAGCAAACCTTCCTAGCCATGATGGATCGACCACAATTCAAACAATCAAATATTTCATTTGCCACAGGAGGATGAGTTTGTCCAAATATGTCAACCACATACTTGCCATTTGCTTCATTACTGTTACTAGGATCAGCCACCCTAACCCTGGCTTGTGCTGACAGCTTCAATTCTTCATCCTCTTCTTCCAAATTTGAATCAAGCCCCGGCCG | |||||||||
gi|193501048|gb|FK464593.1|FK464593 454GmaGlobSeed199225 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAAGCTGCCAGCATGATCTA EST sequence (targeted fragment marked with yellow): GCTTCTTGTCACTTTCAGACGTGCCTTCCTACCCTTTCCCCATGCACTTCTCCAAATGTGGAGCAAACCTTCCAGCCATGATGGATCGACCACAATTCAAACAATCAAATATTTCATTTGCCACAGGAGGATGAGTTTGTCCAAATATGTCAACCACATACTTGCCATTTGCTTCATTACTGTTACTAGGATCAGCCACCCTAACCCTGGCTTGTGCTGACAGCTTCAATTCTTCATCCTCTTCTT | |||||||||
gi|208309493|gb|GE102137.1|GE102137 454GmaGlobSeed844785 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAAGCTGCCAGCATGATCTA EST sequence (targeted fragment marked with yellow): TTCTTGTCACTTTCAGACGTGCCTTCCTACCCTTTCCCATGCACTTCTCCAAATGTGGAGCAAACCTTCCAGCCATGATGGATCGACCACAATTCAAACAATCAAATATTTCATTTGCCACAGGAGGATGAGTTTGTCCAAATATGTCAACCACATACTTGCCATTTGCTTCATTACTGTTACTAGGATCAGCCACCCTAACCCTGGCTTGTGCTGACAGCTTCAATTCTTCATCCTCTTCTTCCAAA | |||||||||
gi|298189174|gb|HO037577.1|HO037577 ocpsga0_0377_H02.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN TGAAGCTGCCAGCATGATCTA EST sequence (targeted fragment marked with yellow): GGGGCTTTGGCAGATTCTTGTGCACCAAAAAGGAAACGCCCTGGCTTGAATACCTGTGGTGGTGATTATGCTGGTAGTTTCAATGTACCATTTCGACATTTCTCATTATCCGCGATGTCAGGTTTTGAGCGAAAGGATTTGAAAGTGAGGTTAACTTGGGAACTTGAACAAGTAAGGGAATTCCAGAAGAAAATTGATGGTATGAACTCAAGTGTTGTTGGAGGATTGTCTCTCTTCAGTGACATAAGGGGCTGCAGTGCAGGGCAGAAGAGGCCTAAGCTGGAGAGCCAGCATAGTACAATGGAAGTATCAGTGCCACCTGGTAAGAAAAGGCCCGTACCAGGACATAATGGTCCCAAGTCAAAGAAAAGTATGTCTGAGCGTCTTGAACATGCAAAACCTGCTGCGCCAGTGACTTCATATGCTATGTTGATGAAATCGTGTGAGAATGTACTAAACCGATTGATGTCTCATCAATTTGCTTGGGTTTTTAACGATCCAGTTGATGTTGTTAAATTGAACATTCCAGATTATTTCACTGTCATCAAGCATCCAATGGATTTGGGTACTGTGAAGA | |||||||||
gi|208310449|gb|GE105585.1|GE105585 454GmaGlobSeed848233 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAAGCTGCCAGCATGATCTA EST sequence (targeted fragment marked with yellow): ACNCAATTCAAACAATCAAATATTTCATTTGCCACAGGAGGATGAGTTTGTCCAAATATGTCAACCACATACTTGCCATTTGCTTCATTACTGTTACTAGGATCAGCCACCCTAACCCTGGCTTGTGCTGACAGCTTCAATTCTTCGTCCTCTTCTTCCAAATTTGAATCAAGC | |||||||||
gi|151396133|gb|EV266010.1|EV266010 GLLB126TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence TGAAGCTGCCAGCATGATCTA EST sequence (targeted fragment marked with yellow): GGCCATGAATGAGGCTATACTTAATAGTAAAGTTGAAGCTATTGTCAATGAGTACAATGAATTGCTTGCTACTCAACTTGAAAACCAAAAATTATATTTTGAATCCTTATTACAAGAAGTAAAAGAAGAATCTGAGAGAAAAATGTCCAAAGCTGTTCAGAAGGCTATCAGTCTTAAACAGCAGAAGATTCAGTCCAAGATTGACAGATGTAAGAAAGAGAAGAAATTTCTGGATGATCTTAATGAGAATCTTGTGAAAAATGAGGACATTTGGAAAACTAAGATACTTGCGATTGAAGAGAGGGAGAAAAAAACCACGAGACTGATGGGTGATAGAGTAGCGGACCTGGAAATGCAGCTTGGTGATCTCATGGTTTGTCTTGAGGGTGGGAGGACGGTAGAACAGCTGGCAGCTTCAGATGAGATTAAAGAAGGGATTATCTTGGACCAATCAATAGAATCCTCGACAACTAGTGGCTCTGACCTGGTGGGAAGAGACGCATAACAGAAGAATGGTTCCTTTTAATGACAGAAGAATGATTCCTTTTAATGGACTACATTGCACGGACTGACCTATACCATGTTTATAATCACAGATTTATAGAAACTACACTCGTGGATCCACAGTTGACATGTTTTCACTCTAATTTTTTCCCATATAAAACTCCCAGTGTATGTATCTGTTTAGATTTGTAAATAAAAAGATTTCC | |||||||||
gi|207700123|gb|GD682110.1|GD682110 454GmaGlobSeed424759 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAAGCTGCCAGCATGATCTA EST sequence (targeted fragment marked with yellow): ACTAGGGTTCATGCGGCCAACAACTACTAGGTGAAACTGCCACATGATCTGATCTTTCCACAGCAAGTGAGGGAAGTTAAGATCATGCTGGCAGCTTCAACTGGTAGTGGTGCATGATGGTAGACAGATATTGAGAAGAACAAGAACAAGTGTTCTAAAAGGTGATGATGTATATGATGATGACGAGATCGGAAATTGAAGGGAGGTTTTAACTGCTGCTTTTGCTAGCTAGGGTTTGG | |||||||||
gi|298180241|gb|HO025456.1|HO025456 ocpsga0_0217_G06.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN TGAAGCTGCCAGCATGATCTA EST sequence (targeted fragment marked with yellow): GGGATGTGGGAGACAACTATGTTCATAGACTTATTCAGTCCAAAACTGATGGGAAGTTGATTGAGCCGAACACTCAGTGTGCGCATGCAGACAATGGATGTGGAAGTTGCAGCTGCGAAGATAATGCCATGAATGAGGCTATACTTAATAGTAAAGTTGAAGCTATTGTCAATGAGTACAATGAATTGCTTGCTACTCAACTTGAAAACCAAAAATTATATTTTGAATCCTTATTGCAAGAAGTAAAAGAAGAATCTGAGAGAAAAATTTCCAAAGCTGTTCAGAAGGCTATCAGTCTTAAACAGCAGAAGATTCAGTCCAAGATTGACAGATGTAAGAAAGAGAAGAAATTTCTGGATGATCTTAACGAGAATCTTGTGAAAAATGAGGACATTTTGGAAAACTAAGATACTTGCGATTGAGGAGAGGGAGAAAAAAACCACGAGACTGATGGGTGATAGAGTAGCGGACCTGGAAATGCAGCTTGGTGATCTCATGGTTTGTCTTGAGGGTGGGAGGACGGTAGAACAGCTGGCAGCTTCAGATG | |||||||||
gi|208060807|gb|GD858717.1|GD858717 454GmaGlobSeed601366 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAAGCTGCCAGCATGATCTA EST sequence (targeted fragment marked with yellow): ACCTCAATTCAAACAATCAAATATTTCATTTGCCACAGGAGGATGAGTTTGTCCAAATATGTCAACCACATACTTGCCATTTGCTTCATTACTGTTACTAGGATCAGCCACCCCTAACCCCTGGCTTGTGCTGACAGCTTCAATTCTTCGTCCTCTTCTTCCAAATTTGAATCAAGC | |||||||||