| mature miRNA: TGAAGCTGCCAGCATGATCTC species: Curcuma longa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|87147578|gb|DY392189.1|DY392189 CL__Eb0006I18.r CL__Eb Curcuma longa cDNA clone CL__Eb0006I18 3', mRNA sequence TGAAGCTGCCAGCATGATCTC EST sequence (targeted fragment marked with yellow): AATGAAGAGGTTGAAGCTGCCAGCATGATCTGGTCATGTAGTTCCTTCTGCTTGCCTTTTCTTTGAAAGATTTTCGCTAAAAAAAAGTCATCTTTAATTCGAGTGTTTCATCGCATCAATTCTTTTTTCACGTTGTAACTAGTTTTAAGTTTTGCCGCCTTCTCTCCTTCCTTGGTATCTCTATATTAAATCTTCGAAATGAATTCTGCAGAGTTTCAATCTGATTTCTATTAGAAAAGAAAAGAAACAAAAAAAAATTTAGTGTTCGTGTTTGCAGGTATCTGTGGAAGAAATAGTGCAAGTTTTGATTTCTCAGGAATTAAGGATAAAGAAACTTTAATTATCTAAAAGTCTAATAATGATTGATCAAATAATTAAATTTTCCCTTAAATTCAAGAGAGCGAAGAGGAGTAGGCATACCTTGTTTTCATTTCATCAGATCATCTGGCAGTTTCAATCCCTCAATTCACCAACAGAAGGCGAAAAGTCTGGCAGAATGCCTGCGTGATCAAGAGGAAACTCAAGAAGGTAATAAATGTGTTAATTGCCTCAACTCAAGAAGTCATATTAATTGATTCTTCCTTTTTATGTGCATATCCGTCACGAAATGATGAAAGTTCTAAGTTTTTTTTCCTATCTGTTCTTGGTTGACTAGGCTTATTCTCCTAGATTATTATAAATATCCATTTTGTACATCATACTGTTGTTATAAATTATTATAGGAACTTAAAATCATACGGTTTTTTTTCTTC | |||||||||
gi|87145723|gb|DY390334.1|DY390334 CL__Eb0003N08.r CL__Eb Curcuma longa cDNA clone CL__Eb0003N08 3', mRNA sequence TGAAGCTGCCAGCATGATCTC EST sequence (targeted fragment marked with yellow): TTTGGAATTTGTTTTCCGAAAAAAATAGATTAAAAATTCTGTATATGTAACTAGGTCTAAATGTGAAGGAATCGACGAGATCATTATGGCAGTTTCATCTGCTATTGGGGAGCACAATCAAACCCTAGCTACCTGATCTTGCTTGCATACTTTTTTCTGTTTAAATTGGTGTCCATAATGATTTGCTTATGTGATAAGTTGGTGTTGCCTATGAAAGATGCTCGATAATATGAGGAAAAATTCCAGGGTTTGGTTTGGAATGAAGCTAATGGACATGATCAAGTTCTAGGTAGTAACTGGTGTTCCTTACTCATCATCTCGGTTTATTGGCGGATTCTTGCAAGAATATCGGTTCAAATGCTCGATATCAACTCCTCTCCGAGCCTTACAATTTATAATTTTATAAATAGAAGCATTCAACATGGTCATAATCATCCCTCTAGGAAAGTTTTTTTTCTCTATCTATCTTTTTGTTTTTCTACTTCTTTGTTCTACATCACTAATCTCTTGTTTGTTTGTTTGTTTTTTCGAAAAGGTTAGAGCAATCAGAAGATGATCAATTGGCAAGCTTGTTTCAATAAGTAAAGATCAAAAGTATTTTGTTGTGAAGGAGAAATATGTGACACACAGCATTGAGAATAAACTTTAGTCAATTTAAAAGGTGTTCTAATTGCGCATTTAAATTGGAGGATCATATAAAAGAATATTCTTGGTAATGGGAAAACTTAGAAATGAAAGT | |||||||||