| mature miRNA: TGAAGCTGCCAGCATGATCTT species: Glycine max database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|298189174|gb|HO037577.1|HO037577 ocpsga0_0377_H02.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): GGGGCTTTGGCAGATTCTTGTGCACCAAAAAGGAAACGCCCTGGCTTGAATACCTGTGGTGGTGATTATGCTGGTAGTTTCAATGTACCATTTCGACATTTCTCATTATCCGCGATGTCAGGTTTTGAGCGAAAGGATTTGAAAGTGAGGTTAACTTGGGAACTTGAACAAGTAAGGGAATTCCAGAAGAAAATTGATGGTATGAACTCAAGTGTTGTTGGAGGATTGTCTCTCTTCAGTGACATAAGGGGCTGCAGTGCAGGGCAGAAGAGGCCTAAGCTGGAGAGCCAGCATAGTACAATGGAAGTATCAGTGCCACCTGGTAAGAAAAGGCCCGTACCAGGACATAATGGTCCCAAGTCAAAGAAAAGTATGTCTGAGCGTCTTGAACATGCAAAACCTGCTGCGCCAGTGACTTCATATGCTATGTTGATGAAATCGTGTGAGAATGTACTAAACCGATTGATGTCTCATCAATTTGCTTGGGTTTTTAACGATCCAGTTGATGTTGTTAAATTGAACATTCCAGATTATTTCACTGTCATCAAGCATCCAATGGATTTGGGTACTGTGAAGA | |||||||||
gi|213587160|gb|DB965906.1|DB965906 DB965906 full-length enriched soybean cDNA library, mixture of seedling, young plant, adult TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): GGGGCACTGCAAACAATTTGTGCCGCAGCAACACCCAAACCATAAACCTAACCCCAACGTTTCTATTCATCTTCATCTTCACCTTCACCTTCGTCTTCAAGCTTCAGCAATGAGAAGGCCGAAATCGAAGGAGTTTCGCAAGCAACAGCGAGTTTCAGAGGAGGAAGAGATAAACCTCTTGAATTCATGGATCCAGTTTCAGCCACCGGACTCCGGTTCGAACCCAATGTCGCTGCCGCGTCTCCCCAAAAACTCCCCCGTTGGTTGCCTCGAAGATAACACCTACTCGCGCTACGCCGGCGCGTCACGGTTTGATCAATTTCCACTCTCGAAGAAAACCAAGGACGCCCTAAGAGAGTCCAAGTTCGTGGCCATGACCGACATTCAGAGAGCGTCTCTTCCCCACGCTCTCTGTGGCCGCGACATCCTCGGCGCCGCCAAAACTGGCTCCGGTAAAACCCTCGCTTTCATTATCCCTGTCTTGGAAAAGTTGTATAGAGAGAGATGGGGACCTGAAGATGGTGTTGGCAGCATCATCATATCGCCTACNAGAGAATTGGCTGGTCAGTTATTTGATGTGTTGAAGGTTGTTGGCAAACACCATAATTTTAGTGCTGGCCTTCTCATTGG | |||||||||
gi|193373288|gb|FK335146.1|FK335146 454GmaGlobSeed69778 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA s TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): AATATTATAAGGAAATTTATGCTGGCCGCTTCAGGGATTTTTACTGCCGTTATGAGGAAAAGCTATACTGTACACACTTGTTACCTGTTCAGAATTAGTTGATGCACAAGAG | |||||||||
gi|308099242|gb|HO761420.1|HO761420 B100430566-3-5-G11-M13_C11.ab1 SSH cDNA library induced by salt from soybean Glycine max cDN TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): ACCTGATTCTTCATTGAATCCTGGAATGACACACAATATTGGTGAATCGGGCTTCCTGCAAACTCCAGAAAATGGGGGGCAAGGAAACCCAACTAACAAAACCTTTGTGAAGGTTTACAAGTCAGGGTCCTTTGGAAGATCCTTGGACATCACTAAATTCACCAGCTACCCTGAGCTACGCAGTGAGCTTGCTCGTATGTTTGGCCTGGAAGGTGAGTTGGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTCGTTGACCAAGAGAATGACGTTCTTCTCCTTGGTGATGGCCCGTGGCCGGAATTTGTAAATAGTGTAGGGTGCATCAAGATACTTTCCCCTCAGGAAGTGCAGCAAATGGGCAACAATGGCCTTGAGCTTCTTAACTCTGTCCCCATTCAGAGGCTCTCTAACGGCGTCTGTGACGACTACGCAGGCCGTGAGGACCCAAGAAATTTAAGCACTGGGATAACAATTGTGGGGTCTTTAAACTACTGAATGATGTGACAATCAATACTATGAATCTCTTCTCTCTCTTGTATTATTACTCCTACTTCTCCACTCTTTGTCAATGGTGGGATGT | |||||||||
gi|209709233|gb|BW678652.1|BW678652 BW678652 GMFL01 Glycine max cDNA clone GMFL01-43-N16 3', mRNA sequence TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): CAGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGGGAGAATGATGTCTTCTTTCTTGGTGATGATCCTTGGCAGGAGTTTGTGAACAATGTGTGGTACATAAAAATACTATCTCCACTAGAAGTGCAACAAATGGGCAAAGGTCTTAGTCCTTCTACTTCTGCCCCAGGTAACAAACTTTCTACTCCTGCCAACTCTTGTGATAATTATGTGAGTCAACAAGAGTTGAGAAGTTCGAGAAATGGCATGGCATCAATGGGATCTTTTCACTACTAGGACACTCTCCCATGTAAGGAAATATTAGTTGAGAAATTATGGTGGCAGAATTTTATGTTACAAGTTTTCTTATGTATGGATTGGCCCAGCATTCTTGTACACATTAATGGTTGACATGTAGTGATTTTGCAAGGTCTAAATAGATCAACAGCAAATGACTGTAAATTATAATAGGTGGCCTTTTTTCTGTAATGGTTAGTTGCTTATAGCAGTTATTAATTATTACTGTATCTCTTATTTAGTTTTGCAATCGAAAATTTGGG | |||||||||
gi|298192242|gb|HO036324.1|HO036324 ocpsga0_0361_D04.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): GGGGGAGGTCTAAAATGTTGTCCATTTTTCACAAGGGGTTTGCTCACCCACCTGAAGAGCTTAAAAGCCCTGCATCTAACAGTGGCTCCAACAAGCCTAAGATTCCTGAGGAAACTCTAAGAGAATTTCTTTCTCATCATCCCCATAACACTTTTTCTCTGAGTTTTGGTCACTCTGCTGTTCTAGCTTATACTCGTCCTGATCCACCTTCCTTTGTTCATCAAAGGTTGTTTTGTGGGATTGATGACATATACTGTATCTTTTTGGGGAGCTTGAACAATTTGTGCTCACTCAACAAGCAGTATGGTTTGGCAAAGGGCACCAACGAAGCCATGTTTGTGATTGAAGCTTACAAGACACTCCGTGACCGTGGTCCATACCCTACAGATCAAGTTGTGAAGGATCTTGATGGCAGCTTTGGCTTTGTTGTCTATGACAGCAAGGTTGGCAGTGTCTTTGCAGCACTGGGTTCTGATGGTGGAATTAAGCTGTATTGGGGTATTGCAGCTGATGAATCTGTGGTAATCTCGGATGATCTAGATGTCATGAAA | |||||||||
gi|207719816|gb|GD701685.1|GD701685 454GmaGlobSeed444334 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): CTCGCCTAACTTTGTCTGGCACTATTGAAGAAACGGAAAACAGTGAGCTGAGCGCAACCAGTGGAGAGTCAAAAGTATTCAAAATGCGTAGAATTTAAGGAAATTATGAGGAGGTGCTGAACAGTCTTAGACTGTTGATTGTAAAATTTGGACAGAATATAGGAAATTTGATGTTATAATATTATAAGGAAATTTATGCTGGCCGCTTCAGGGATTTTTTACTGCCGTTATGAGGAAAAGCTATACTGTACAACT | |||||||||
gi|298190568|gb|HO032689.1|HO032689 ocpsga0_0313_G04.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): GGGGATAACAATCCCTATTAAAATCTTCTAAAATTAAATTACCATATATAGTCACATTTTCTTTACACTTTGTGAGGTCTAAAATGTTGTCCATTTTTCACAAGGGGTTTGCTCACCCACCTGAAGAGCTTAAAAGCCCTGCATCTAACAGTGGCTCCAACAAGCCTAAGATTCCTGAGGAAACTCTAAGAGAATCTCTTTCTCATCATCCCCATAACACTTTTTCTCTGAGTTTTGGTCACTCTGCTGTTCTAGCTTATACTCGTCCTGATCCACCTTCCTTTGTTCATCAAAGGTTGTTTTGTGGGATTGATGACATATACTGTATCTTTTTGGGGAGCTTGAACAATTTGTGCTCACTCAACAAGCAGTATGGTTTGGCAAAGGGCACCAACGAAGCCATGTTTGTGATTGAAGCTTACAAGACACTCCGTGACCGTGGTCCATACCCTGCAGATCAAGTTGTGAAGGATCTTGATGGCAGCTTTGGCTTTGTTGTC | |||||||||
gi|193368512|gb|FK335648.1|FK335648 454GmaGlobSeed70280 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA s TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): AATATTATAAGGAAATTTATGCTGGCCGCTTCAGGGATTTTTACTGCCGTTATGAGGAAAAGCTATACTGTACACACTTGTTACCTGTTCAGAATTAGTTGATGCACAAGAGAAACT | |||||||||
gi|298197957|gb|HO039496.1|HO039496 ocpsga0_0403_D08.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): GGGGGAGGTCTAAAATGTTGTCCATTTTTCACAAGGGGTTTGCTCACCCACCTGAAGAGCTTAAAAGCCCTGCCTCTAACAGTGGCTCCAACAAGCCTAAGATTCCTGAGGAAACTCTAAGAGAATTTCTTTCTCATCATCCCCATAACACTTTTTCTCTGAGTTTTGGTCACTCTGCTGTTCTAGCTTATACTCGTCCTGATCCACCTTCCTTTGTTCATCAAAGGTTGTTTTGTGGGATTGATGACATATACTGTATCTTTTTGGGGAGCTTGAACAATTTGTGCTCACTCAACAAGCAGTATGGTTTGGCAAAGGGCACCAACGAAGCCATGTTTGTGATTGAAGCTTACAAGACACTCCGTGACCGTGGTCCATACCCTGCAGATCAAGTTGTGAAGGATCTTGATGGCAGCTTTGGCTTTGTTGTCTATGACAGCAAGGTTGGCAGTGTCTTTGCAGCACTGGGTTCTGATGGTGGAATTAAGCTGTATTGGGGTATTGCAGCTGATGAATCTGTGGTAATCTCGGATGATCTAGATGTCA | |||||||||
gi|208161814|gb|GD966116.1|GD966116 454GmaGlobSeed708765 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): TTAACTTTGCTGGCACTATTGAAGAAACGGAAAACAGTGAGCTGAGCGCAACCAGTGGAGAGTCAAAAGTATTCAAAATGCGTAGAATTTAAGGAAATTAGTGAGGAGGTGCTGAACAGTCTTAGACTGTTGATTGTAAAATTTGGACAGAATGTAGGAAATTTGATGTTATAATATTATAAGGAAATTTATGCTGGCCGCTTCAGGGATTTTTTACNGCCGTTATGAGGAAAAGCTATACT | |||||||||
gi|298178889|gb|HO024624.1|HO024624 ocpsga0_0207_C01.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): GGGGATAACAATCCCTATTAAAATCTTCTAAAATTAAATTACCATATATAGTCACATTTTCTTTACACTTTGTGAGGTCTAAAATGTTGTCCATTTTTCACAAGGGGTTTGCTCACCCACCTGAAGAGCTTAAAAGCCCTGCATCTAACAGTGGCTCCAACAAGCCTAAGATTCCTGAGGAAACTCTAAGAGAATTTCTTTCTCATCATCCCCATAACACTTTTTCTCTGAGTTTTGGTCACTCTGCTGTTCTAGCTTATACTCGTCCTGATCCACCTTCCTTTGTTCATCAAAGGTTGTTTTGTGGGATTGATGACATATACTGTATCTTTTTGGGGAGCTTGAACAATTTGTGCTCACTCAACAAGCAGTATGGTTTGGCAAAGGGCACCAACGAAGCCATGTTTGTGATTGAAGCTTACAAGACACTCCGTGACCGTGGTCCATACCCTGCAGATCAAGTTGTGAAGGATCTTGATGGCAGCTTTGGCTTTGTTGTCTATGACAG | |||||||||
gi|193369166|gb|FK337072.1|FK337072 454GmaGlobSeed71704 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA s TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): ATATCTTTAAGATGGGGCTGGGAGCTTCAGCTGACTTTATATTCTCTTTGTCTTTCTCTAAATTTCATTTTGGC | |||||||||
gi|209718029|gb|BW671860.1|BW671860 BW671860 GMFL01 Glycine max cDNA clone GMFL01-33-N12 3', mRNA sequence TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): GATGAACTGATTAGTGAGCTTGCTCGCATGTTTGGCCTGAAGGCCAACTAGAGGACCCTAAGACTCAGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGGGAGAATGATGTTCTTCTTCTTGGTGATGATCCTTGGCAGGAGTTTGTGAACAATGTGTGGTACATAAAAATACTATCTCCACTAGAAGTGCAACAAATGGGCAAAGTTCTTAGTCCTTCTACTTCTGCCCCAGGTGACAAACTTTCTACTCCTGTCAACTCCTGTGATAATTATGTGAGTCAACAAGAGTTGAGAAGTTCGAGAAACGGCATGGCATCAATGGGGTCTTTTCACTACTAGGACACTCTCCCAGTCCCATGTAAGGTATATTAGTTGAAAAATTATGGTGGCAGAATTTTATGTTACAAGTTTCTTATGTATGGATTGGCCCAGCATTCTTATACACATTAATGGTTGAGATGTAGTGATTTAGCAAGGTCTAAATAGATCAACAGCAAATGACTGTAAATTATAATAGGTGACCCTGTTTCTGTAATGGTTAGTTGCTTATAGCAGTTATTAATTATTATCTCTTATTTTGTTTTGC | |||||||||
gi|207700123|gb|GD682110.1|GD682110 454GmaGlobSeed424759 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): ACTAGGGTTCATGCGGCCAACAACTACTAGGTGAAACTGCCACATGATCTGATCTTTCCACAGCAAGTGAGGGAAGTTAAGATCATGCTGGCAGCTTCAACTGGTAGTGGTGCATGATGGTAGACAGATATTGAGAAGAACAAGAACAAGTGTTCTAAAAGGTGATGATGTATATGATGATGACGAGATCGGAAATTGAAGGGAGGTTTTAACTGCTGCTTTTGCTAGCTAGGGTTTGG | |||||||||
gi|208328913|gb|GE130925.1|GE130925 454GmaGlobSeed873573 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): CGGCCGGGGAGATCCAATTCCTCCAAACCAGCTGCGTTCAATGCAAGAACTTTGTTATCAACTGCTCAAGTTGGGCACGGGGGGAAGAGGATGCTGGCAGTTTCCTGGATCACACCCTGTTTCTCTGAACAGGGACAATCTGCAACTCTTAAGACAACGATATTACTATGCCACGTGGAAAGCTGATGGGACACGATATATGATGCTGATTACTTGCGATGGATGTTATCTGATTGACAAG | |||||||||
gi|298179552|gb|HO028023.1|HO028023 ocpsga0_0250_G11.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): GGGGATAACAATCCCTATTAAAATCTTCTAAAATTAAATTACCATATATAGTCACATTTTCTTTACACTTTGTGAGGTCTAAAATGTTGTCCATTTTTCACAAGGGGTTTGCTCACCCACCTGAAGAGCTTAAAAGCCCTGCATCTAACAGTGGCTCCAACAAGCCTAAGATTCCTGAGGAAACTCTAAGAGAATTTCTTTCTCATCATCCCCATAACACTTTTTCTCTGAGTTTTGGTCACTCTGCTGTTCTAGCTTATACTCGTCCTGATCCACCTTCCTTTGTTCATCAAAGGTTGTTTTGTGGGATTGATGACATATACTGTATCTTTTTGGGGAGCTTGAACAATTTGTGCTCACTCAACAAGCAGTATGGTTTGGCAAAGGGCACCAACGAAGCCGTGTTTGTGATTGAAGCTTACAAGACACTCCGTGACCGTGGTCCATACCCAGCAGATCAAGTTGTGAAGGATCTTGATGGCAGCTTTGGCTTTGTTGTCTATGACAGCAAGGTTGGCAGTGTCTTTGCAGCACTGGGTTCTGATGGTGGAATTAAGCTGTATTGGGGTATTGCAGCTGATGAATCTGTGG | |||||||||
gi|254323309|gb|GR840114.1|GR840114 CCCC11059.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC1105 TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): AAGAGCTAGTTTCTTGGGTAACGCTGCATTTTATGCTCAGGAGGGCAATGAAAAAAGGAGTAACTATTTCTCAAATGTTTTGAAGTCAGCAAAAGAGAAGGCTGGCAGCTTCAAGTGGCGGCAGCTTGATACTCGGGGATCAATAGATTCCACGGATGAGAAGCCACCAATGTACCCTAATTTGCCGTTGTTGGTCACATCTGCAAGCATTACTTCATCTTTTCGGGCTGCCGAAACTGATGAGTTGCCTGTATCAAGCCAGGTTGAAGACGAGTCTCAGCACAAACAGACCGATGTTAGTGATATCAGCATTAATTTATTGTCAGTATCAGAAAGATTCGACGACTTCAAAGCTAATAAAGAAGCTAAACTAGCGGAGTGGCTGGACGGAACTGGCAACCTTGATGATAATTGCGGCACAGGTGATGAGAAAAGGTCTTAGTTTGGCATGATAAAGAAGCTATACTTCAATAAAATGCTTCACCCCGTACATGCTGTTGTACAACATCAAGTTTCTCTGAATTGTGATTATAAATAAATGATTTTTTTGTAA | |||||||||
gi|208233892|gb|GE035511.1|GE035511 454GmaGlobSeed778159 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): TGAAATCATACTCGCCTAACTTTGCTGGCACTATTGAAGAAACGGAAAACAGTGAGCTGAGCGCAACCAGTGGAGAGTCAAAAGTATTCAAAATGCGTAGAATTTAAGGAAATTATGAGGAGGTGCTGAACAGTCTTAGACTGTTGATTGTAAAATTTGGACAGAATGTAGGAAATTTGATGTTATAATATTATAAGGAAATTTATGCTGGCCGCTTCAGGGATTTTTTACTTGCCGTTATGAGGAAAAGACTATACTAGG | |||||||||