| mature miRNA: TGAAGTGTTTGGGGGAACTC species: Brachypodium distachyon database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|270386151|gb|GT764969.1|GT764969 CCXF5133.g1 CCXF Brachypodium distachyon abiotic + biotic stress pool Brachypodium distachyo TGAAGTGTTTGGGGGAACTC EST sequence (targeted fragment marked with yellow): CCGGAGAAGCTGAACGTCACGTCGATCGACACCTATGATGACCACCGGATGGCGATGGCCTTCTCCCTGGCCGCCTGCGCCGAGGTGCCAGTCACGATCAGAGACCCCGGGTGCACCCGCAAGACCTTCCCCAAATACTTCGACGTGCTAAGCCCTTTCGTGAAGAACTAGATAGGTCAAGAGGCTATAATAAGTTGTGTTTGTACTTCGTAGTCTGTCCCTGGGCTGAGGAAATTTTTACTCTTTCATCTTCTCGCGAGAAGATCTTCGAGTCTGTGTAATATTAGTTTGTAGCATGGCATATGGTTTTTGAGATAAAAAGGAGTTGTATTTCATACTAATTTGTTTTGAATAAGCAATAAG | |||||||||
gi|78020222|gb|DV488609.1|DV488609 5516_F07_L14RZ_053 Brachypodium distachyon root EST library Brachypodium distachyon cDNA clon TGAAGTGTTTGGGGGAACTC EST sequence (targeted fragment marked with yellow): CCCCTTTTCCGGACTAGTTCTAGATGCGGCGGCCGCTCGCGGGGGCAGGCTGATGGAGCTGGTGGCGCCCGAGCAGGGCGGGCGGCGCGCGGCGCTGCGGCGGGAGGCGGCGGCGCTGCCGCACCGGGTCCGGCTGGGCCGCGTGGAGACGGAGTGGGTGCACGTGCTCAGCGAGGGCTGGGCCAGCCCGCTGCGGGGCTTCATGCGCGAGAGCGAGTTCCTCCAAGCACTTCATTTCAACGCCGTCCGCGGCGACGATGGGAAACTGGTCAACATGTCCGTGCCCATCGTGCTCGCCGTCGACGACGCCCAGCGCCGCGCCATCGAGGCGTCCGGCGCCACCCGCGTCGCGCTCGTCGACGACCACGACCGCCCCGTCGCGGTCCTTAGCGACATTGAGATCTACAAGCATAATAAGGAAGAAAGAATTGCTCGGACTTGGGGAACAATTGCACGTGGACTGCCGTATGTAGAGGAGGCAATTGCAAATTCTGGTGATTGGTTGATTGGTGGGGACTTGGAGGTTAT | |||||||||