| mature miRNA: TGACAACGAGAGAGAGCACGC species: Zamia vazquezii database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|166947395|gb|FD775473.1|FD775473 Zfi03b_24_G08_C018.g1 Second Zamia male gametophyte library Zamia vazquezii cDNA clone 122Oo TGACAACGAGA-GAGAGCACGC EST sequence (targeted fragment marked with yellow): AGTGCTCCGCAAAACTGTAGCGAACAACAACGGCCCTTCGATTCACCGTGTTCTCTCGTCGCTGCTAAGGCTGCGAGCTGCTGATGCTGCTAGAGCCGAAATTCTCCGAGTCACTTCGCATTCGACCGTGCAGGGTTTATGGCTGTGCAGATACCGCGCTGTTGACGACGAGAGAGAGCACGCTTGTAGACAATAATATGATTTTGGACGGTTATTACAACGTATTTCTGTGTACATGCGTGTTCTCGTCCCGTTGTCAGCAGTAATGAACAGGAGTCCAATTTTGGAGAAAGCCTCTGAAGGCAGCAACAGAGCGAGAATGCCAAAATTAATGGTCAAAATAGATATCCGCCTGCTGCTCAGAGATCGCCAAAGGCGGCGAGCTGGACTTCATTGTCTCGGGAGGTTCTACCGGCGTTGGAATATGGAAACTTGGTATGTGTTAAGTAGATACAGCGCCTGTGACAGGCACTGCAGGAACGCTGCCTATTTAAAAATAGTTGCCCATCACCAATTTATTCATCGTGAAAGAATTTTTATCCTTTCATATTCCCGATTTGATTGAATCGGTCCGTATTGATCTACAGTTTTCAAATTTTTTTTCATTTGAGTTGAGAGAGGCGTACCTTCTCCTTCCAGGGATCGACTCACCGC | |||||||||
gi|166947347|gb|FD775425.1|FD775425 Zfi03b_23_G08_C018.b1 Second Zamia male gametophyte library Zamia vazquezii cDNA clone 122Oo TGACAACGAGAGAGAGCACGC EST sequence (targeted fragment marked with yellow): CCCCTCGAGTTTTTTTTTTTTTATAGACCAAGAGTATTAATTAAATATAAAAATATATAATTAGCATAATTATTCGATAGGAACGAGAGCCAGCTTGGCGGCGGTGAGTCGATCCCTGAAAGGAGAAGGTACCCCTCTCTCAACTCAAATGAAAAAAAATTTGAAAACTGTAAATCAATACGGACCGATTCAATCAAATCGGGAATATGAAAGGATAAAAATTCTTTCACGATGAATAAATTGGTGATGGGCAACTATTTTTAAATAGGCAGCGTTCCTGCAGTGCCTGTCACAGGCGCTGTATCTACTTAACACATACCAAGTTTCCATATTCCAACGCCGGTAAAACCTCCCGAGACAATGAAGTCCAGCTCGCCGCCTTTGGCGATCTCTGAGCAGCAGGCGGATATCTATTTTGACCATTAATTTTGGCATTCTCGCTCTGTTGCTGCCTTCAGAGGCTTTCTCCAAAATTGGACTCCTGTTCATTACTGCTGACAACGGGACGAGAACACGCATGTACACAAAAATACGTTGTAATAACCGTCCAAAATCATATTATTGTCTACAAGCGTGCTCTCTCTCGTCGTCAACAGCGCGGTATCTGCACAGCCATAAACCCTGCACGGTCGAATGCGAAG | |||||||||