miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TGACAAGGAGAGAGAGCACGC
species: Actinidia deliciosa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|195242780|gb|FG433541.1|FG433541 001102KABA006227HT (KABA) A. deliciosa petal Actinidia deliciosa cDNA clone KABAA00622, mRNA

TGACAAGGAGAGAGAGCACGC
|||||||||||||||. ||.
ACTGTTCCTCTCTCTTCTGTT

EST sequence (targeted fragment marked with yellow):
GATTTGTCTTCTCTCTCCTTGTCACCCATTTTCTACTCCACCCTACATTTTTGCTATTAGCCTCAGTATCTACGATAAAGCTTCAGATCTGAGTTTCGAAAGCTTCGTTTTATTCGATTCACATCCTAATCCACTAGTTCGCAGATCGAGGAACGCAAAAAGTTTTTGCAATGGGGAGACTCCACAGATCTGCAATCATTGTTCTCTTCGCGCTTCTCTCACTACAACTCACGGAATCTGCAGATCCGCCGCATTCCGCCCCGACTCCAGCCCCCAATTCCGGCGCCGACTTCACTCCGCCGCCTGAATCCCCATCCCCAGCGAGTCCTTCGCCCTCGCCGGGACTGCGTTCGCCTCCGGACGATTCCGCTCCCGGATCGTCACCGACGCCATCACCGGCGAAGAAGTCTCCGTCACCGGCGCCGTCCGCGCCGGGTGACGCTGGTACTGTGAAGAGCCATGTGAATGATGGTGGTGAGGAACAAAATGAGTCTTCCGGTGGACTCGG