miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TGACAGAAGAAAGAGAGCACA
species: Raphanus raphanistrum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|167483408|gb|FD969638.1|FD969638 RR2H914JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
|||||.|||||| | | ||||
ACTGTTTTCTTTATATGGTGT

EST sequence (targeted fragment marked with yellow):
TCTAGCAGTTATCCTCTAAGAGAGTCGCAGAGGCGCGAATAGAAAACAAACAGAAATTCATAATGGCTCAGAAGCTTGAACTAATCAGAGGTGGAGGAGGATCCATCAAAATAGGAGCCACAGGAACGGTGGCAACTCTGATGACTCGCGAGCTAGACTCCATGAAACAACAACCTTCGCCTCAGACTCCCACAACTAAACCCATTAGAACAACTATCCCCGTCTCTGTAGACTGTGGCACCTCTTCTTCCACTCCAAGAAGACCAAAAGCAAGAAAATCATCAGACGAAGCTAGCAGCAGCAGCAATGTTAGAACACCAAAGGGTCACATCACCAAAAGCACTCATCAGCTTCCTAATGTTGTTGGCTCTGATAACGTTAGAACACCAAAGGGTCACAATGCTAAAAAAAGCACTCATCAGCTTCCAATGCTTGGCTCTGATAATGTATCGCTGCAAGGAACTCCGAGAAGGGAGAAGAGAATGAACATTGTGGATATTGTGGATGTGAAATGCGGGAATCCTGATCGGGCTTGGGCTAATCCGATAACCAGTAGACTCAAGAAGCTTGGCTTCTCTAAACTCAATGAGAGCATTGGTTAAAGTAGCTGAACCGAATTATTATACTCTGTCCCATCCGGTTTGTTTATCGGTATGAACCGAATTAAACCAAATGAGAATGTGGTATATTTCTTTTGTCAAACCAACAATGTAATTGTAAACGGAGCTTTTGGTTGTCATTAAAGTCTTTTATTTT



gi|166120883|gb|FD554904.1|FD554904 RR4FG20JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
..||||||||| ||.|||| |
GTTGTCTTCTTACTTTCGTTT

EST sequence (targeted fragment marked with yellow):
TAGTGTGTGATCATGAGACGTTTGGTTTAGTATTTTATAAGGTTTATAAGCTCAAGCAAGCTGAAGACTTGAGGGCTAATCTGTGAAACGAGCAGCTTTGGATGATGAGGAAGAGTTGAGCTGGGATATTTATGATGAAGAGGAGACTGCTAGCGAGAAAGTTGATGAAGTTGCCAAAGATGTTTCGAGATTGAAACTTGAGGGGAATGATAGTGGAGACGTTAGCGAAACTGTGAAGGATTCAGTGACTGAAAAGAGCGTTAAAGATGATGTGACAAGTGCAGATTCAGTGTCTGAAGTGAGCAATGCTGGTTTGAACACAGAAACAGATTCTGAGGTGAAGAAGGAAACTGGTAGTGAGAAAGCCCCAGAATCAATAGTAGTTGCTGATGCTGCTGCTCCTCCTGCATCTGATGAGTCTCCAGCTCAAGATCCGGGCAAAAAACAGGAAGCTGTTCAAGAATCTGTTGAGAGTGCTCCGTCCCAAGAAGACTCAGACAAACCAGATGGCGCTGCCTCTTCGTTAGCTCAAGGCTCAGGTAAGCCAGATGGTGCTGCTTCTTCAACAGCTCAAGAAGAGGATTTGGGATGGGATGAGATAGAGGATATGAGTAGCATCGATGGTAAGGAAGCGAGTAGAACTTCTGGTGGTAGTCCGAACAGAGCTGAGCTGCGTAAACGCCTGAGTGCTGCAGAGGAAGATGAGGACTTAAGCTGGGACATTGAAGATGACGACGAATAATCATCACCATCATCAAAAACTTAATCTAGTATCATAGTGGTGTTGTTTTTTGTAAGTTTCTGGTAATTTGCTTTCATTCTTCTGTTGTTATCTCTTTAACGTTCTGTTAAAATTTGATATATGCAAACATTTGATTTCAAAAAAAAAAAAAAAA



gi|167475376|gb|FD960988.1|FD960988 RR1GY64JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
|||||.||.|||||||. | |
ACTGTTTTTTTTCTCTTCTAT

EST sequence (targeted fragment marked with yellow):
TCCAAGATGTTCAACATCACGTACATAGGAAACCACACGTGTAACACCAAAGAAGTAGCACCCAAGATCAAGCCTTGTGTTCATCATGATGAGATCATTATGCATTCTGAAGAGCTCAGTAGTCCTAGCTTGACTACCACGATGAAGGAAGAGGAAGAGAATCATCATCATGGTTCATCCACGGAGAGTGACTTGCAATTAGTGTGGCATGAAATATTGGTGTGTGAAGAAGAACATCTTCATCATCATCATGAGGCTATTTATGGTTGTGGTGAAACTAGTGTCAATGGTTTGGATTCCGCGGATCTTTGGAATTGGCAGTGATTTCCGATTCAGCGGGAATGAGTAGTAGCTCTCTTACCTCGAACCAAGTTCGAGTCTAGCTTACATTACTATAGAATGGAACATCTATATTTTGTCATCTTCTCTAGAGAAATAATTATCAGGCTTGTATAATGGAGCATAAATATATTGTCTTCTTCTTCTTCAATGAGTGTATGTCTGTACATATTGTAGAATATGTAATAACACTCTTGTTGGATTAAGTGTATATATCTTCTCTTTTTTTTGTCATCATATATATCTACTCTTATATTCCAAAAAAAAAAAAAAAAAAAA



gi|167474194|gb|FD959641.1|FD959641 RR1GD43JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
|.|||.||||||||||. | |
ATTGTTTTCTTTCTCTTTTTT

EST sequence (targeted fragment marked with yellow):
CTCATCTGCCCGTCCATGCACCATCATCACCACCATCATCATCAAACCGAGGAAAACCCGGTTAGATGCGAAGAAGAAGAAGAGACTGTTCAGCCTAACAAGAAGAGAAAGACTAACTCAAAAGCTAGCGGGACAACAACAAAAGGGAAGAAGCCTCGTAAACCAGAAGAAGAGAACGACAGCAAGACTAACGTTTCAAGAGTAAAACCGGCTAAGAAAAGCGTTGACTTGGTTATCAACGGAGTGAACATGGACATTTCCGGTTTACCTGTACCGGTCTGCACTTGCACCGGAGCTCCTCAGCAATGCTACCGTTGGGGATGCGGCGGTTGGCAGTCTGCGTGTTGCACCACGAACATATCGATGCATCCGTTGCCGATGAGTACTAAACGCCGTGGAGCGAGGATCTCCGGGGGGAAGATGAGCCAAGGAGCGTTTAAGAAGGTTCTTGAGAAACTTTCTTTTGATGGGTTTAACTTTGGGAGCCCCATTGATCTTAAGAGCCATTGGGCTAGACATGGGACTAACAAGTTCGTCACCATCAGATGATTAGTTTCAGGTAATCTCATCTTCGTTTTAAGAGTTTGGAAACAGTCCTTTTTTATCATACGGTTGCTTTTATGTTCTTGTAGCCTTGTCTGTTTGTTTGTTTGTTTGTATGTCTGAGGAAGAAGGTGACTGAGAAAATCCGCAGGGAAGTTTGAATTCTTTACTTTTTTTTTTCTCTTTCTTTTGTTATTTTTATAAACATTTTACTGACTTGTAAGTTGTAACAGATAATTCATTTTGATTAAATGTTTTTATTTCTCCGAAAAAAAAAAAAAAAAAAA



gi|166123426|gb|FD555114.1|FD555114 RR4FJ12JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
||||| |||||||||| |||
ACTGTATTCTTTCTCTAATGT

EST sequence (targeted fragment marked with yellow):
GCACAGCTGATGAGACCAGTGATCTGTGGCTTACCGCTCAGAAGGTTGGCTCTCGGATTGAGACCTTCCACAATGCATCTTCTCTCACGTTAGCCATCCAAGTAACTATTTTCCAATTCATTCTTCATTGTGTGTGACTCTGAAACGATCAGGATCGGAATGATTGCTGTAAACTCTGGTTTCTTGATAATGGCATAGGATGGTCCTCAGGCGGGACAGAGTGTTCCACATGTGCACATTCACGTCTTGCCTCGTAAAGGTGGTGACTTTGAGAAGAATGATGAGATTTACGATGCAGTAAGTTGCTGTCTGTGTTTTCATCATTATTGCTTAGCTTGGAGTTTAGAAAAGTCTTTTGTCTTATACTAGTCGTGTCTTGTTATATAGATTGATGAGAAGGAGAAGGAACTGAAGCAGAAGCTTGATCTAGACAAAGACCGTGTTGATAGGAGCATTGAGGAGATGGCTAACGAGGCTTCTCAGTACAGATCTCTTTTCGATTGCTAGTTTTTAAGCAAAAGATATCCACTGGCTTCTAAGCCTTTTTAATAACACCATTGTGACAAGCGTCTCTCAAGTTGAGGTTGATGTTTGAGACTTCAATTCGAACTTGTAATCTCTTTCTTATGTCACCAACTAGAAACAACTATTTGTTTATTTGAAGAACCCACATGACACAAATAGTTTGGTGAGTTGCAAAAAAAAAAAAA



gi|167496567|gb|FD979117.1|FD979117 RR3G854TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence

TGACAGAAGAAAGAGAGCACA
||| ||||||||| .|.||||
ACTCTCTTCTTTCATTTGTGT

EST sequence (targeted fragment marked with yellow):
GTGCTCGTTCTCGTTTCCAGAAGAGTTACCGTTAAGCAAATCTGGTTTGTGTTTACTTTCTTCTCTCAACCGTTTCGAGAAAAGAGTTGTTGAAGTATATCATCTTTTGAGTTTTGTCTTTATGGTTATTGGATAATGTTTTGACAATGTCTTGATCGTTTACTTTTGAAGAACTTTATAAGTTTTAAATTTTGAATCTCTTAGAAAAAAAAAAAAAAAAA



gi|167486583|gb|FD971328.1|FD971328 RR2GD40TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence

TGACAGAAGAAAGAGAGCACA
.|||.||||||.|.|.||||
CTTGTTTTCTTTTTTTTGTGT

EST sequence (targeted fragment marked with yellow):
GGAGCTAAATCACACCAAAAACCCTAATCTCTCAAATCTTCTCCAAACAAAAAAAAATGGCTAACCCTAGAGTTTTCTTCGACATGAGCGTGGGCGACAAACCCGCCGGCCGCATCGTGATGGAGCTTTACGCCGACACAACCCCCGACACCGCCGAGAATTTCCGCGCCCTCTGCACCGGCGAGAAGGGAGTCGGCAAATCCGGAAAGCCGCTCCACTACAAGGGCTCGGCCTTCCACCGCGTGATCCCCAAGTTCATGTGCCAGGGAGGTGATTTCACCGCCGGGAACGGGACCGGAGGAGAGTCGATCTACGGCATGAAGTTCAAGGACGAGAACTTTGTCAAGAAACACACCGGTCCGGGCATCCTGTCCATGGCTAACGCTGGTCCGAACACGAACGGATCTCAGTTTTTCATCTGCACTGAGAAGACGTCGTGGCTCGATGGGAAGCATGTTGTGTTCGGTCAGGTTGTTGAAGGGATGGATGTCGTTAGGAACATTGAGAAGGTTGGATCTGACAGTGGAAGGACCTCGAAGAAGGTTGTGATCGCTGACTGTGGTCAGCTTTAGATCTGGTGAGAGAAAGTGCGAGAGAGAGTGGTTGATCCAATGGTAGCTTTGTTCTGTTGTGTTTTTTTTCTTTTGTTCCCGTTCTTCGTTTGGATCTTTGTGTTTCTGTGGCTACATTGAATAATAATGATAATGATTAATCTTCAAAAA



gi|166098222|gb|FD531185.1|FD531185 RR1FJ66JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
| ||||||||||. ||||| |
AATGTCTTCTTTTCCTCGTCT

EST sequence (targeted fragment marked with yellow):
CTGGACTGCATTGAAACACCCTCAGAGTATTCTAGTTCCCGGTCCAGCTCCCACGGAAGGCATCGCACTGGTAAACCAGCTGTGGCTGCAGGACCGTCTGCTGAAAAACCTGAAAGGATCTCAGTTGGGAGGGAGATCCGCGACAGATTCTCTGGTGCAGTTGAAGCATTCGCGAGAAGGAACGCTACAGGAGCCACTCCCCATCAAAGCCAAACAAAGCATCGAACTGTTGACGATGTTCCTTCACCAATGAAACCTTCTGTGAATATGGTATCTGAGAAAGGAAGGAACACTTCCAGATACGGAAGTGCTTCGAGGAGAGCGGTTGCCTCAGGGAGTAGGCCAAGCTCATCAGGTGAACAAGGGGACAGCCGCAGCTCAAGCCGTGTGGCCTCAAGCGGTGGTGGTGGTGGTGGTGTCCGACCATCTGTCTTTCAGAGAGCCCAAGCGGCAGCTGGTGTGAGTGGATACGAGTCTAAGACAGCTTCTTCCTTTAACCGAAACAGAGTGGCTGCTTCTAGGACGGCACGTGATGATGCTCTCAGAAGCTTTGAGCTTCTTTCTATCCGCAAATGAGAAAGAAGTAATAGAACAAAACGGAACTGTACACTATCAATCTGCTCCTTTTCTTCTGTAAATTGGATTCTTCCTTTACACATGTGTTGTTTTGTTCCTCACGTTCCCACGAAACTCCCAATTTTTCATGTATTATTATGTCTGTAACGTTTCTCTGGATTTTTTGTATTAATTTGTTTTACGCTCTTCTTGTAATGTAATCACGACAAGCTGTTTCTGCAAAAAAAAAAAAAAA



gi|154256247|gb|EV567296.1|EV567296 RR4AK81TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence

TGACAGAAGAAAGAGAGCACA
||||||||||| .||| |||
ACTGTCTTCTTCTTCTGGTGC

EST sequence (targeted fragment marked with yellow):
GGAATTAGAGAACAAAACGTTCGTCGTGGTCTTCTTCTTCTGTCACCTCCTCCTCGGCACTCCGGTGATCGATAATCACACAGAAGTACTCGTAACGAGAAAAAAAGGCTCAGAGATGCATTCATTTGGATACAGAGCAAATGCTCTGCTCACGTTCTCCGTCACGGCGCTCGCCTTCATCTGCGCAATCGCGTCTTTCTCTGACAAATTCAGCAACCAGAATCCCTCTGCTGAGATCCAGATACTTAACATCAATCGGCTTAAGAAGCAATCTTATGGCAATGATGAGGTTAGCTTGACATTGGACATAGCTGCAGACTTGCAGTCACTGTTTACTTGGAACACCAAACAGAGTTTTCGCTTTCGTGGCAGCTGAATATGAAACCCCAATGAACTCCCTGAATCAGGTTTCTCTATGGGATGCTATTATCCCTGACAAGGAACATGCCAAGTTCCGCATTCAAACCTCAAACAAGTACCGTTTCATTGATCAGGGACATAACCTTCGTGGAAAAGAGTTCAACTTGACGTTACACTGGCATGTCATGCCCAAGACCGGCAAGATGTTTGCTGACAAGATCGTCATGCCTGGTTACAGTTTGCCAGATGCATACAAATGATGAAAAGACTGAAGAAAAGCTTCTAAGAGTTTTTGAATTTCGTCTCTTTTATTCTGTATAACTACTATTGGATTTTTTTTCTAAACAGAAAAAATAAAAGCATGACCATGAGAGTTTAGAACGTTGTTTCAACATAACTATGACCTAAACTTTAGCTATTCTTTGCTGTCATG



gi|158639979|gb|EX749870.1|EX749870 RR1CR96TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence

TGACAGAAGAAAGAGAGCACA
|||||||||||||||| ||
ACTGTCTTCTTTCTCTAAAGT

EST sequence (targeted fragment marked with yellow):
GGAAGACTCTCTTGCTGGACTTTTATCAAGTTCCTCTGTTCTACACTGGCTGATGGTGCAACGACGTAAGGATGACAACTTGACAAACTTTACCGTGAAAGTGTCTTCCTTAAAAACATTATATTATAAAAGTGCTTGGCCCATGGATGAGCCCGTAGAAGGAAGGGGACGATGATGATGATGATCTCATTGGGTCGTTGGTACTAGATACCCCTGCACTAGATGATATAAGCTTAATTACCGTTTGCGAAGACTGCTGCTTGATAGATAACATGTCTTGTCTTGAGGAGGCAAACATAAGCCATGTTATTTACCCCGATGACAAGTTTCTGAAATCTCTTTCTTCTGTCAAACATCTGTACTTGTGTTTGACCAATCCGATGGTTGGTAGCAGTAACGACGTTAAATTCTCTCGGCTCATAGAGTTTTACTTCTTGACAAAAACAGTAGATTGGTTGGAACCACTTATGTTTTTCCTTCAAAATTCTGCTCAATTGAAATTTCTTACAATCCACACGGAACATGAGAGTCCATCACCTCCCTGGAACCAGCCGAGTTCTATTCCGGGATGCTTGTCATCTCATCTAGAGATCTTTGTGTGGAACAACTATGAAGGAAGAGATGATGAGAAACAACTATTGTCATACATTCTTGCTAACTCAGAGTGTTTAAAGAGAGCGGAGATAAATCTCATAGCAACCTGCAATCTTGAAGAGAGACAAAAGGAGA



gi|161518790|gb|EY898733.1|EY898733 RR1DM90TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence

TGACAGAAGAAAGAGAGCACA
..||||||||||.|.|.|| |
GTTGTCTTCTTTTTTTTGTTT

EST sequence (targeted fragment marked with yellow):
GGAGCTTCCATCAAAACTCTCATTTCTCATTTGTTTTTTTTCTTCTGTTGAGTTTAATTTCTAGAAACTAAAAGTTATGATTGATCCTCAATCTCCAATCTCACCTCACCTATACCCACAAGCAATTCAACTCAAACTTTATCAAGCCTTCATCTTCTCCATTCCCATCTTATTCTCCATCATTCTCTTCCTCTTGTTCTATCTTTTTTACCTTAAGAGAAGAGCCTCTTCTCTATCTTCACCCTCTCCAATGACTCTTCCTGTTTCCTCGCCCCACCAGACTTCTCCTCATCTCCCCTCGGTGTGTTTGTTAATGTGAAAGTAGAGCTCAAAGAAAGGCTTCATTTGGTTTTGTTTAATGAAGAACTAGGAACAAGAGATTCTCTATGTTGCGTATGTTTGGGCGAATTCGAGTTGAAGGAAGAGTTGGTGGAAATGCCTTCATGCAAACACATATTTCATCTCGATTGCATTCACCTTTGGCTTTATTCTCACACCACTTGCCCTCTCTGTCGCTCCCCTGTCTTTATCTCTTCGACCAAAACCTCTATCGACGACGACGAGAATGACCATCCAGAATCAGATTCTCCTCAAACCACTTTACATGTTTGACTCAACCCGAAAGAAATAAGCACGATACAAGTTTTGTTAGTCAATAGATCCATACAAAAATGTAAATCTTAATTTTGCTTGTTTAAGAGATCAACATATATACCATCACATTACATATTGGTTGCAA



gi|167503700|gb|FD989035.1|FD989035 RR4GU71TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence

TGACAGAAGAAAGAGAGCACA
..||||||||||.|.|.||||
GTTGTCTTCTTTTTTTTGTGT

EST sequence (targeted fragment marked with yellow):
GGAGAACAAAGAAGGATACACAGTGATAATTCAGAAGCCGAGGAAGATGGCTTCAGAAGATGAACCGGTTGTGTCTCAAAGCTTCAAAGTTGGAGAAGTTGGCAAGATTTTACTAACCGTGAATAACCCGACGTCCAACAAGAAAATTCTTATTTACAGGTTCAAGGTTAAGCCTTTGCCGTGTGAGTAACAAAAGTTGCATCTATCTTAAAAAGTGTTTCTTAGTTTAGAACTTGATCAAATGATTGTTGGTTGTGTTTTTTTTCTTCTGTTGCCGACTTATATGTGTGTGTGTGTTCTGTTTGTTAAATTCGTTTGTTTTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



gi|154099422|gb|EV532395.1|EV532395 RR1B887JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
..||||||||| ||.|||| |
GTTGTCTTCTTACTTTCGTTT

EST sequence (targeted fragment marked with yellow):
GTGATGATGAAGAGGAGACCACCGAGAAAGTTAACAAAGATGTTTCAGGGTTGAAACTTGAGGGGAATGATAGTGGAGACGTTAGCGAAACTGTGAAGGATTCAGTGACTGAAGTGAGCAATGTTGGTTTGAACACAGAAACAGATTCTGAGGAGAAGAAGGAAACTGGTAGTGAGAAAGCTCCGGAATCAATAATAGTAGTTGATGCTTCTCTTCCTCCTCCTGCATCTGATGAGTCTCCAGCTCAAGATTCAGGCGAAAAACAGGAAGCTGTTCCAGAATCTGGTGAGAGTGCTCCATCATCACAAGAAGACTCAGACAAACCAGATGCTACTGCTTCTTCATTAGCTCAAGGCTCAGGTAAGCCAGATGGTGCTGCTTCTTCAACAGCTCAAGAAGAGGATTTGGGATGGGATGAGATAGAGGATATGAGTAGCATCGATGGTAAGGAAGCGACTAGAACTTCTGGTGGTAGTCCAAACAGAGCTGAGCTTCGTAAGCGTCTGAGTGCTGCAGAGGAAGATGAGGACTTAAGCTGGGACATTGAAGATGACTGACGAAGAATCATCATCAAAAGCTTAATCTAGTATCATAGTGGTGTTGTTTTTTGTAAGTTTCTGGTAATTTGCTTTCATTCTTCTGTTGTTGTCTCTTTAACGTTCTGTTAAAATTTGATATATGCAAACATTTGATTTGG



gi|167493107|gb|FD976823.1|FD976823 RR3GV54JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
||||||||||| .| || |||
ACTGTCTTCTTGTTATCTTGT

EST sequence (targeted fragment marked with yellow):
CATCAGTGAAGTCTACACATAACAGGAGTTATGTAAACGACCAAGAAGATGATGATGTGTCAGGCTCTCCTTTGTTGGCTTATGCTGACAATAACCAAGAACCGGTTCAAGAAATCAGGTAGAGACATTAAAAAGCTATATCTCTTATGTGTTCTTTTTTAGGGAAGTTTTTCATTGTTTCAGATTCAGTTCTCTGGTGTTGAAGATGATAGCATGGAGTTAGTTTGTTTCCATCAGAGGAACAGAAGCTCTGAGTCTAGGACCAATCGCCCACGAAGTTCAAGACGAAACAGGAAGAAGAGACGGTCAGAAAGTAACAGGCACGGTTTGACACAAGCTTCATTCACTATACTGCTAGAGAACAGAGAGCAGCTGCGACAGTACAGTGAAAGCTCATCGTCATCACCAATACATGATAGATCGGGTACTACTACTCCAACAGAAGACATCTGTGAGAAACTAAAGATAGATTTGGATTCTGAGGACAAAGTGAAGAGAGAAGAGAGTGAAACAGAGTCAAGACGGGACAGCAGCAAGAAGAGTGTGTTGAGATGGGGTTTGGGTTTCTTCTCTGTTGTAGTTGCAGGGCTTGCTTCCTTTATGTGGGTGCATCTGCAAGATGATATGATGATGCCTCCTCATCTTGTTCCTACTTGAAGCGCAAGTAGTGAGCATAGAAAGCTTAGAACTTACTTAGGTTCAGATTGTGTGTTCTATTGTTCTTCTGTCAATGTGTGGATCTTTTTTGAATACTCTCTCTCTTTTTACTCCCAAAAAAAAAAAAAAAAAA



gi|158640796|gb|EX750687.1|EX750687 RR1BM27JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
..||||||||| ||.|||| |
GTTGTCTTCTTACTTTCGTTT

EST sequence (targeted fragment marked with yellow):
TTAGGTATTTTACAAGGTTTATAAGCTCAAGCAAGCTGAAGACTTGAGGGCTAATCTTGTGAAGCGAGCAGCTTTGGATGATGAGGAAGAGTTGAGCTGGGATATTGATGATGAAGAGGAGACCACCGAGAAAGTTAACAAAGATGTTTCAGGGTTGAAACTTGAGGGGAATGATAGTGGAGACGTTAGCGAAACTGTGAAGGATTCAGTGACTGAAGTGAGCAATGTTGGTTTGAACACAGAAACAGATTCTGAGGAGAAGAAGGAAACTGGTAGTGAGAAAGCTCCGGAATCAATAATAGTAGTTGATGCTTCTCCTCCTCCTCCTGCATCTGATGAGTCTCCAGCTCAAGATTCAGGCGAAAAACAGGAAGCTGTTCCAGAATCTGGTGAGAGTGCTCCATCATCACAGGAAGACTCAGACAAACCAGATGCTACTGCTTCTTCATTAGCTCAAGGCTCAGGTAAGCCAGATGGTGCTGCTTCTTCAACAGCTCAAGAAGAGGATTTGGGATGGGATGAGATAGAGGATATGAGTAGCATCGATGGTAAGGAAGCGACTAGAACTTCTGGTGGTAGTCCAAACAGAGCTGAGCTTCGTAAGCGTCTGAGTGCTGCAGAGGAAGATGAGGACTTAAGCTGGGACATTGAAGATGACTGACGAAGAATCATCATCAAAAGCTTAATCTAGTATCATAATGGTGTTGTTTTTTGTAAGTTTCTGGTAATTTGCTTTCATTCTTCTGTTGTTATCTCTTTAACGTTCTGTTAAAATTTGATATATGCAAACATTTGATTTGAATCCAAAATTCCGCAAAAAAAAAAAAAAAA



gi|167483950|gb|FD967927.1|FD967927 RR2GK01JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
|||||||||||.|||. |||
TCTGTCTTCTTTTTCTTTTGT

EST sequence (targeted fragment marked with yellow):
TGTGGCGGTTAAAGGTTCAAGAACAAACTGGCAGCCAATGTCTAGGAACTGGGGGCAAAACTGGCAAAGTAACAATCTGCTCAATGGTCAAGCATTGGCCTTTAAGGTTACTGCTAGTGATGGTCAAACTGTCGTCTCCAACAATGTTGCTCCGGCTAGCTGGTCCTTTGGACAAACCTTCTCCGGCCGTCAGTTCCGTTAAAATTGTGTCAGAAGTTTCGGTTTTATGTAGTTTAGGGTTTGTGTTGTGTCAAGGACAGAGGAGAGAGAGTTGGAGAGGGAGAGGGTTTAAGGCTCTGTTAGGGTTTTAATGGGAGAGTCATTAAGCTTCTTCTTTCAACTCTTGAGGGTAAAATGGTGAAAAGGGCTTATTTTAATAGGGCTCTTTTAGTCATTTTTAAGAACTAGGGTTATAGTAAGTGAGTATTGAGTAGAGTGGTGTGTGCATCTTTTAGCAAAGGGACCTCTATGTAATGGCTTCCTTTGTTTTATCAACTTTTTTTTACCTTCTGTTTTTTTATCTGAAAAAGCAGAAGTGGGTAGGGGCAGAGGAGGAACTTCACCACCCGCCATGTGTGTTTTCTTTTTCTTCTGTCTTTTGTTTTGTCGTTGTTTACGAAGTTGTAATGTAAGGGCTGCTCTTGTGGGCTTTCATAAGTGTTATGTTACCATTGTTACCAAAAAAAAAAAAAAAAAA



gi|166117163|gb|FD546692.1|FD546692 RR3FC20JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
|||||||||||||||||||||
ACTGTCTTCTTTCTCTCGTGT

EST sequence (targeted fragment marked with yellow):
TCTCTCTCTGTGTTGTCTTCTCGTTACGGGAGGATAGCACCTTCGCTTTACGGAAATGCTGAAACTACAATGAATGGGAGCTTTCTTGGTTCCCAAGAAATGGGTTGGACAAATACTAGAACGTTGGATACAAGAGTGATGAGACGACCGTCGTGGCAGATCAATCCGATGAACGTGTTTAGTCAAGGATCAGTCAGTGGAGGAGGAGGAGGAGGGATAAGCTTCTCATCTCCAGAGGTTATGGACACTAAACCAGAGAGCTACAAGGGGATTGGCAGCGACTCAAACTGTGCTCTCTTTCTTCTGTCAAACCCACACCAGCCACATGACAACACCAACGAAACAACACATGGAGAACTTCTTCAGGTTTTGGTCCGATGACGGTTACAATGGTTCAGCCGCCACCTGCACCTAGCCAGCATCAGTATCTGAACCCCCCTTGGGTGTTTAAGGACGATGACAATAACTGTCAGGATGATATGTCTCCTGTTTTGAATTTGGGGCGATTCACCGAGACAGAGATGGGCGGTGGAACGGCAATGGGTGAGTTCGAGTTATCTGACCATCAACATCAGAATAGGAGGCAGTACGTGGAAGGTGAGAACTCGAGGGCTTATGACTTTTCTTCACACCATCACAACTGGTC



gi|158652024|gb|EX761915.1|EX761915 RR3BL84TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence

TGACAGAAGAAAGAGAGCACA
|||||.||||||||||| ||
ACTGTTTTCTTTCTCTCTTGA

EST sequence (targeted fragment marked with yellow):
GGGAAAGACAAAGTGATGATGCTAGAGAATTACATTCTTTGAAGATCAGTTCTCTCTTTCTTTTGTCAGAGATGGAACAGGGTGAAGGAGAAGTCAAAAAGAGAGTTGCTTTTGTCCTGATCGATGGTTTGAGAGATGTCTCAATACCGAGGTTAGGCTACAAGACTCCGTTACAAGCAGCAAACATACCTAATCTCGACGCAATCGCATCAGCTGGAATCAACGGTCTGATGGATCCAGTGGAAGTTGGATTGGGATGCGGCAGTGACACGGCTCACCTCTCTCTCATGGGTTATGACCCCAGAGTGTACTACAGAGGACGCGGCGCCTTTGAGTCAATGGGTGCAGGGTTAGCAATGTCACCAGGTGATATAGCTTTCAAGTCTAACTTTGCGACGTTGGATGAGGAAACTGGCGTTGTTGTTAGCCGAAGAGCCGACCGTCATTTCGAACAAGAAGGGCCTATACTTTG



gi|158666422|gb|EX776313.1|EX776313 RR4CE68JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
..||||||||| ||.|||| |
GTTGTCTTCTTACTTTCGTTT

EST sequence (targeted fragment marked with yellow):
GAGCAGCTTTGGATGATGAGGAAGAGTTGAGCTGGGATATTGATGATGAAGAGAAGACTGCTAGCGAGAAAGTTGATGAAGTTGCCAAAGATGTTTCGAGATTGAAACTTGAGGGGAATGATAGTGGAGACGTTAGCGAAACTGTGAAGGATTCAGTGACTGAAAAGAGCGTTAAAGATGATGTGACAAGTGCAGATTCAGTGTCTGAATTGATCAATGCTGGTTTGAACACAGAAACAGATTCTGAGGTGAAGAAGGAAACTGGTAGTGAGAAAGCTCCAGAATCAATAGTAGTTGCTGATGCTGCTGCTCCTCCTGCATCTGATGAGTCTCCAGCTCAAGATCCGGGCAAAAAACAGGAAGCTGTTCAAGAATCTGTTGAGAGTGCTCCGTCCCAAGAAGACTCAGACAAACCAGATGGCGCTGCCTCTTCGTTAGCTCAAGGCTCAGGTAAGCCAGATGGTGCTGCTTCTTCAACAGCTCAAGAAGAGGATTTGGGATGGGATGAGATAGAGGATATGAGTAGCATCGATGGTAAGGAAGCGAGTAGAACTTCTGGTGGTAGTCCGAACAGAGCTGAGCTGCGTAAACGCCTGAGTGCTGCAGAGGAAGATGAGGACTTAAGCTGGGACATTGAAGATGACGACGAAGAATCATCACCATCATCAAAAACTTAATCTAGTATCATAGTGGTGTTGTTTTTTGTAAGTTTCTGGTAATTTGCTTTCATTCTTCTGTTGTTATCTCTTTAAC



gi|161538514|gb|EY909745.1|EY909745 RR3D802JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
|| ||||||||.|||| |||
TCTTTCTTCTTTTTCTCCTGT

EST sequence (targeted fragment marked with yellow):
ACGTGCGCGCAAGAAGAAAGAAGAGGAAGAAAAACGGATGGAGCGTGAAAGAGAGAAGGAGCGAATTGGGATTGGGAAGGAACTCTTGGAAGCAAAGCGGATTGAAGAAGATAACGAAAGAAAACGTATAATCCTTTTGCGTAAAGCCGAGAAAGAAGAAGAAAGACGGGCTAGGGAAAAGATCCGTCAAAAAGTTGAAGAAGACAAGGCTGAAAGAAGGCGAAAACTAGGACTGCCTGCTGAAGATCCCGCAGCTGCAAAACCCTCAATGCCAGTTGTGGAGGAGAAGAAGAGTTCATTGCCTATTAGACCCGCCACTAAGACTGAACAAATGAGAGAATGCTTGAGGTCGCTTAAGCAAGCCCACAAGGAGGATGATGCTAAAGTAAAGAGAGCGTTCCAGACTTTACTGACTTACATGGGAAATGTCGCTAAGAATCCAGATGAAGAGAAATTCCGGAAAATTAGGCTCACCAACCAAACATTTCAGGATAGGGTTGGTTCACTGAGAGGAGGAATAGAGTTCATGGAGTTATGTGGGTTTGAGAAATTGGAAGGAGGAGAGTTCTTGTTCTTACCAAGGGACAAGATAGATTCAGCCATTATCAACTCAGCTGGAACAGAGCTCAATTCAGCCATCAACAACCCTTTTTTCGGAGTTCTTTAAATTGCTGCTGCATTGTCCTCTTTTTCTTCTTTCTCTTTTGTACTTTGTCAAATTATGTTTAAGATACCAAAACCAAATGCCTTGAGAAATCAGAAAAATACTCCGGTTTGAAACGGTTTTTAATCCGGTTTAGACATTTTGCCTATATATATTATGCGAAAAAAAAAAAAAAAAAAAAAAA



gi|166122512|gb|FD555018.1|FD555018 RR4FH75JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
|||||.||.|||.|.|.| ||
ACTGTTTTTTTTTTTTTGAGT

EST sequence (targeted fragment marked with yellow):
TCAGAATTTGGGATATATGTGTGATAAGTATATAGGAGGTCGTACTTTTCCTATAAATGGAACCTTAAAATTTAATGAAAAATATGTAAATCGTGACGGAGCGAACGTTCCAAAATGGAATTGTATTTTGCTTAAAGGACTTTATATTTATCCATTGGTAGTAGAATTATCAGTTCCGACACCTCCATGTAAAAATGGATTGCGCTCATGGATTGCTAAAAACGATGGAATTTATTTTGAGAGAAATGGAAAAAAACCTATGAAACTAGTTGGTGGATGGCAAAACAATGGTGGGGATTAATGTGATTTTTTTTTCCTTTTGTTTTCCCTTAAAACTAATTAATGTTTATGAAACTTGAGTTTTTTTTTTTTTGTCATTTCAGCCAAGTTATCTTTCGAGCTTGGTATTAGAAGCTATACATATACCCCAGATTATTGTAATAAGATATGAGTTTCATGTATATTTATGTATACTATATTTGATTCTTTAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAA



gi|158665012|gb|EX774903.1|EX774903 RR4BV42JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
||||||||||||||||||||
ACTGTCTTCTTTCTCTCGTGG

EST sequence (targeted fragment marked with yellow):
TCTCAGATCACAATGCAAGACGTCGCAAGCCAAATCCTGGGGGGACATATGATGGGAAACAACAGATGGATTTTGTATGGAATAGATTTGTTCTTATCCATCCAAGAAGTGAGGAGAAGTTTTTATGGCCAAATCCAAAACCTATACCATTTAGAGGGTTAATACAGCAACCTGCAAAGACTAGAGCTGAGTTGTTCAGTAAAGAAAATGTGACAATTTCTTCAAGGATGGGTGCTTCTCAAGATCTTGATGGTGCTCTCTTTCTTCTGTCAAATTCAACATCATGGGTTCCCTCTGACCAGCCAACACGGTTTTCCCTTGATCACCACCCCACAACCAACCTCCAACCCATGGCTCACCGGTCCGTGACTCAACTCAGTACGGTGTCCGACTATTGGCAGCCGGACCCACCAGCTGTTGAGGGTCCAACTGGTCTACGTAGAAACGGGGCATAGTGTTAACGTTAATATAGGAGCTGTGAAACTTGTTAAGACGCCAAATCCTGTCTTCTTTACTTTGTCCACTAATTTTTCTTGGGTTTGACTGAGGAAGCTGTGGCAATTAGTCTTATAAATCATCTTGTCATGTTATTTATACACTAGAATTTTCACAAAAAAAAAAAAAAAAAAA



gi|158657063|gb|EX766954.1|EX766954 RR3BV69JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
||||| |||||||||| |||
ACTGTATTCTTTCTCTAATGT

EST sequence (targeted fragment marked with yellow):
CTTACAAGATCGATCCGCGTGAAGTGTTCTACGCAACTCCTCTCTCTTACGCCATGGTTAATCTCCGTCCTCTTCTTCCTGGTCATGTTCTTGTCTGTCCAAGACGCCTTGTGCCGCGCTTTACTGATCTCACAGCTGATGAGACCAGTGATCTGTGGCTTACTGCTCAGAAGGTTGGCTCTCGGATTGAGACCTTCCATAATGCATCTTCTCTCACATTAGCCATCCAAGATGGTCCTCAGGCGGGACAGAGTGTTCCACATGTGCACATTCACGTCTTGCCTCGTAAAGGTGGTGACTTTGAGAAGAATGATGAGATTTACGATGCAATTGATGAGAAGGAGAAGGAACTGAAGCATAAGCTTGATCTAGACAAAGACCGTGTTGATAGGAGCATTGAGGAGATGGCTAACGAGGCTTCTCAGTACAGATCTCTTTTCGATTGCTAGTTTTTAAGCAAAAGATATCCACTGGCTTTTAAGCCTTTTTAATAACACCATTGTGACAAGCGTCTCTCAAGTTGAGGTTGATGTTTCAGACTTCAATTCCAACTTGTAATCTCTTTCTTATGTCACCCAACTAGAATCATCTATGTGTTTATTTGAAGAACCAACATGACACAGATAGTTTGGTGTGTTGCAAAAAAAAAAAAAAAAAAAAAA



gi|154254941|gb|EV565992.1|EV565992 RR4A636TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence

TGACAGAAGAAAGAGAGCACA
|||||.||||||||||| ||
ACTGTTTTCTTTCTCTCTTGA

EST sequence (targeted fragment marked with yellow):
GGGAAAGACAAAGTGATGATGCTAGAGAATTACATTCTTTGAAGATCAGTTCTCTCTTTCTTTTGTCAGTTGGATCAGAGATGGAACAGGGTGATGGAGAAGTCAAAAAGAGAGTTGCTTTTGTCCTGATCGATGGTTTGGGAGATGTCTCGATACCGAGGTTAGGCTACAAGACTCCGTTACAAGCAGCAAACATACCTAATCTCGACGCAATCGCATCAGCTGGAATCAATGGTCTAATGGATCCAGTGGAAGTTGGATTGGGATGCGGTAGTGACACTGCTCATCTCTCTCTGATGGGTTATGACCCCAGAGTGTACTACAGAGGACGCGGCGCCTTTGAGTCAATGGGTGCAGGGTTAGCAATGTCACCAGGTGATATAGCTTTCAAGTCTAATTTTGCGACGTTGGATGAAGAAACTGGCGTTGTTGTTAGCCGAAGAGCCGACCGGCATTTCGAAGAAGAAGGGCCTATACTTTGTGCAGCTCTTGATGGAATGAAGCTTCCTTCTTTCCCTGAGTATGAAGTGAGAGTCAGATACGCAACGGAACGCAGATGTGGAGTGGTTGTAAAAGGGCCAAAGCTCAGTGGGAACATCTCAGGAACTGACCCTTTGAAGGATAACCGTTTGCTTCTCCAAGCAAAACCTCTGGACGAATCAGAAGAAGCCAAACACACAGCTAACGTCGTCAACGAACTATCCAAGGAGATATCACGCATCCTTGTC



gi|161529451|gb|EY901461.1|EY901461 RR2D202JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
..||||||||| ||.|||| |
GTTGTCTTCTTACTTTCGTTT

EST sequence (targeted fragment marked with yellow):
TATTTTATAAGGTTTATAAGCTTAAGCAAGCTGAGGACTTGAGGGCTAATCTTGTGAAGCGAGCAGCTTTGGATGATGAGGAAGAGTTGAGCTGGGATATTGATGATGAAGAGGAGACTGCTAGCGAGAAAGTTGCTGAAGTTGCCAAAGATGTTTCTAGGTTGAAACTTGAGGGGAATGATAGTGGAGACGTTAGCCAAACTGTGAAGGATTCAGTGACTGAAGTGAGCAATGTTGGTTTGAACACAGAAACAGATTCGGAGGAGAAGAAGGAAACTGGTAGTGAGAAAGTTCCAGAATCAATAATAGTTGTTGATGCTGCTCCTCCTCCTCCTGCATCTGATGAGTCTCCAGCTCAAGATTCGGGCAAACAACAGGAAGCTGTTCCAGAATCTGGTGAGAGTGCTCCATCCCAAGACAAACCAGATGGTGCTGCTTCTTCATTAGCTCAAGGCTCAGGTAAGCCAGATGGTGCTGCTTCTTCAACAACTCAAGAAGAGGATTTGGGATGGGACGAGATAGAGGATATGAGTAGCATCGATGGTAAGGAAGCGAGTCGTACTTCTGGTGGTAGTCCAAACAGAGCTGAGCTGCGTAAACGTCTGAGTGCTGCAGAGGAAGATGAGGACTTAAGCTGGGACATTGAAGATGACGACGAAGAATCATCATCAAAAGCTTAATCTAGTATCATAGTGGTGTTGTTTTTTGTAAGTTTCTGGTAATTTGCTTTCATTCTTCTGTTGTTATCTCTTTAACGTTATGTTAAATTTTGATATATGCGAACATTTGATTCGAAAAAAAAAAAAAAAAAAAA



gi|167501206|gb|FD983664.1|FD983664 RR4GD23JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
..||||||||| ||.|||| |
GTTGTCTTCTTACTTTCGTTT

EST sequence (targeted fragment marked with yellow):
GGGGAATAATAGTGGAGACGTTAGCGAAACTGTGAAGGATTCAGTGACTGAAGTGAGCAATGTTGGTTTGAATACAGAAACAGATTCTGAGGAGAAGAAGGAAACTGGTAGTGAGAAAGTTCCTCCGGAATCAATAATAGTAGTTGATGCTGCTCCTCCTCCTCCTCATGCATCTGATGAGTCTCCAGCTCGAGATCCGGGCAAACAACAGGAAGCTGTTCCAGAATCTGGTGAGAGTGTTCCGTCATCACAAGAAGACTCGGACAAACCAGATGGTGCTGCTTCTTCGTTAGCTCAAGGCTCAGGTAAGCCAGATGGTGCTGCTTCTTCAACAGCTCAAGAAGAGGATTTGGGATGGGACGAGATAGAGGATATGAGTAGCATCGATGGTAAGGAAGCCAGTAGAACTTCTGGTGGCAGTCCAAACAGAGCTGAGCTGCGTAAGCGTCTGAGTGCTGCAGAAGAAGATGAAGACTTAAGTTGGGACATTGAAGATGACGACGAAGAATCATCATCAAAAGCTTAATCTAGTATGGTGTTGTTTTTTTGTAAGTTTCTGGTAATTTGCTTTCATTCTTCTGTTGTTATCTCTTTAACGTTCTGTTAAAATTTGATACATGCAAACATTTGATTTGGAAAAAAAAAAAAAAAAAAA



gi|161527457|gb|EY900757.1|EY900757 RR1E957TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence

TGACAGAAGAAAGAGAGCACA
||||| |||||||||| |||
ACTGTATTCTTTCTCTAATGT

EST sequence (targeted fragment marked with yellow):
GGAAGCGGGAAGGCGATCTTGTCCAGTGTTCGTTGTAGGAGACAGATGTCGACTTCTTCTTCCTTTGTCTTTGGTCCTTACAAGATCGATCCGCGTGAAGTGTTCTACGCAACTCCTCTCTCTTACGCCATGGTTAATCTCCGTCCTCTTCTTCCTGGTCATGTTCTTGTCTGTCCAAGACGCCTTGTGCCTCGCTTTACTGATCTCACAGCTGATGAGACAAGTGATCTGTGGCTTACTGCTCAAAAAGTTGGCTCTCGGATTGAGACCTTCCATAATGCATCTTCTCTCACATTAGCCATCCAAGATGGTCCTCAGGCGGGACAGAGTGTTCCACATGTACACATTCACGTCTTGCCTCGTAAAGGTGGTGACTTTGAGAAGAATGATGAGATTTACGATGCAATTGATGAGAAGGAGAAGGAACTGAAGCAGAAGCTTGATCTAGACAAAGACCGTGTTGATAGGAGCATTGAGGAGATGGCTAACGAGGCTTCTCAGTACAGATCTCTTTTCGATTGCTAGTTTTTAAGCAAAAGATATCCACTGGCTTCTAAGCCGTTTTAATAACACCATTGTGACAAGCGTCTCTCAAGTTGAGGTTGATGTTTGAGACTTCAATTCGAACTTGTAATCTCTTTCTTATGTCACCAACTAGAACAACTATTTGT



gi|166111917|gb|FD540542.1|FD540542 RR2EM62TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence

TGACAGAAGAAAGAGAGCACA
..||||||||||.|.|.|| |
GTTGTCTTCTTTTTTTTGTTT

EST sequence (targeted fragment marked with yellow):
GGGGCTTCCATCAAAACTCTCATTTCTCATTTGTTTTTTTTCTTCTGTTGAGTTTAATTTCTAGAAACTAAAAGTTATGATTGATCCTCAATCTCCAATCTCACCTCACCTATACCCACAAGCAATTCAACTCAAACTTTATCAAGCCTTCATCTTCTCCATTCCCATCTTATTCTCCATCATTCTCTTCCTCTTGTTCTATCTTTTTTACCTTAAGAGAAGAGCCTCTTCTCTATCCTCACCTTCTCCAATGACTCTTCCTGTTTCCTCGCCCCAACAGACTTCTCCTCATCTCCCCTCGGTGTGTTTGTTAGATGTGAAAGTAGAGCTCAAAGAAAAGCTTCATGTAGTTTTGTTTAATGAAGAACTAGGAACAAAAGATTCTCTATGTTGCGTATGTTTGGGAGAATTCGAGTTGAAGGAAGAATTGGTGGAAATGCCTTCATGCAAACACATATTTCATCTCGATTGCATTCACCTTTGGCTTTATTCTCACACCACTTGCCCTCTCTGTCGCTCCTCTGTCTTCATCTCTTCGACCAAAACCTCTATCGACGACGACGAGAATGACCATCCAGATTCTCCTCAAACCACTTCACCGGTTTGACTCATTAACTCCGAAAGAAATAAGCACGATACAAGTTTTGTTAGTCAATAGATCCCATACAAAAATGTAAATCTTAATTTTGCTTGTTCAAGAGATCAACGTGTATA



gi|167499845|gb|FD983878.1|FD983878 RR4GG41JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
.|| ||||||| |||||||||
GCTATCTTCTT-CTCTCGTGT

EST sequence (targeted fragment marked with yellow):
AAAATCATCTCTCTGATCCGATCTATTTCCTCTGGTGATGAAAAGAGGAAGAGATATGCTGCGTCTTCTCTGCCACTTGATTCCACCATGAGTTTCTACCTCTCCCTTAAAACTGGTCGTTTTTGGTTCCCAGCTCAAGTTTACAACCGTGAGAATGGGCATGTAGGGTTCGTGTTGTCATGCTATGATGCGGAGCTCAGCTATGATACTCACACTGATACGTTTCAAGCCAGGTATGCACCACATGGTAGAAAGGCAGTTGCGGTTGAAAAAGGTGTGACATGGGAAAGGCTAAGAGCAGCTCCCATCGATATATCTCCTCATCATCTTCATGTGTCAGATTCTCTAAACGAGTTGAAACCTGGAGATCACATTGAGATTCAGTGGAGAAGAAACAAAGCGTTCCCTTATGGATGGTGGTATGGTGTCGTTGGCCACTTAGAATCCTGTGATGGGAATCTCAACCATTGTCACTGCCATCTTAATGAGATGGTGGTGTTGGAATTCAACCAGTACACAGTGGGATCGAGGTGGAGAAGAACGATGATAAACAAGAGAGATCATAGAGAGGAAGGTAACGAGGAAGAGGGGTTCTATGGAGGAATCAGAAAGCTAAGTTGTAAAGAAGAGATTGCTATGTGGACACGTCTCTGGCCATCTTCCATCTTAGAGTAGGATGATGGGACTAAAAACCACAATCATTGTACGGAGGGTAGGGATGTTAATTTTAGATGTGTGCTCTCTTCTTCTATCGAAA



gi|154168781|gb|EV540055.1|EV540055 RR2A626JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
|.|||||||||| ||||| |
ATTGTCTTCTTTGTCTCGAAT

EST sequence (targeted fragment marked with yellow):
CGCAGCTCGTGATGATGATGATGATGACTCGGATTGTTCTGTGGAGATAGAGGAAGAATCTTGGTCTTTGGATTCTGAGGTTGGGAAGCGACTCAACCAAATGATACCGATTGCTCATGTGCCGAAAATCAATGGGGAGTTACCGTCAGAGGATGAGCAGGTTTCTGATCATGAACGGCTTTTTCAGAGATTACAGCTTTATGGCTTGGTGGAGAACAAGATAGAAGGAGACGGCAACTGCCAGTTTCGGTCACTGTCAGATCAGCTTTACCGCTCTCCAGAGCATAATTTTGTCAGAGAACAAGTTGTTAATCAGCTTGCGTATAATCGAGAGATGTATGAAGGTTATGTTCCAATGGCGTACACCGACTATCTTAAAACAATGAAACGGAATGGAGAATGGGGTGATCATGTTACTCTTCAGGCTGCTGCTGATTGGTATGGTGTTCGGATGTTTGTGATAACTTCATTCAAGAACACATGTTACATTGAGATCTTGCCTCATTTGCAGAAGTCCAACCGCCTTATATGTTTAAGCTTTTGGGCTGAGGTTCATTACAATTCAATCTATCCTGAAGGAGAGCTGCCTGAACCGGAGGGGAAGAAGAAGAAATATTGGGTTTTTTAAGCTCTGTTTCTTCTGTTAAGAAGAAATATATTTAACATGTTCGTTCTTTTTACTAACCTAGTATGTTTAGTGCTAGAGAGTATGGTCTTGTACATACTGAACATAATCTCCCACTTAAGGCATTAACTAGACTTATAGTTCGCCC



gi|161531308|gb|EY903456.1|EY903456 RR2DX10JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence

TGACAGAAGAAAGAGAGCACA
|.|||.||||||||||. | |
ATTGTTTTCTTTCTCTTTTTT

EST sequence (targeted fragment marked with yellow):
GGGAGGAAGATGAGTCAGGGAGCGTTTAAGAAGGTTCTTGAGAAACTTTCTTCTGATGGGTTTAACTTTGGGAGCCCCATTGATCTTAAGAGCCATTGGGCTAGACATGGGACTAACAAGTTCGTCACCATCAGATGATTAGTTTCAGGTAATCTCATCTTCGTTTTAAGAGTTTGGAAACAGTCCTTTTTTATCATACGGTTGCTTTTATGTTCTTGTAGTCTTGTCTGTTTGTTTGTTTGTTTGTATGTCTGAGGAAGAAGGTGACTGAGAAAATCAGCAGGGAAGTTTGGATTCTTTTACTTTTGTTATTTTTTTTCTCTTTCTTTTGTTATTTTTATAAACATTTTACTGACTTGTAAGTTGTAACAGATAATTCATTTTAATTAAATGTTTTTATTTCTCAAAAAAAAAAAAAAAAA



gi|154092083|gb|EV525056.1|EV525056 RR1A790TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence

TGACAGAAGAAAGAGAGCACA
||||||||||| .||| |||
ACTGTCTTCTTCTTCTGGTGC

EST sequence (targeted fragment marked with yellow):
GGACAGCAATTAGAGAACAAAACGTTCGTCGTGGTCTTCTTCTTCTGTCACTTCCTCCTCGGCACTCCGGTGATCGATAATCACACAGAAGTACTCGTAACGAGAAAAAAAGGCTCAGAGATGCATTCATTTGGATACAGAGCAAATGCTCTGCTCACGTTCTCCGTCACGGCGCTCGCCTTCATCTGCGCAATCGCGTCTTTCTCTGACAAATTCAGCAACCAGAATCCCTCTGCTGAGATCCAGATACTTAACATCAATCGGCTTAAGAAGCAATCTTATGGCAATGATGAGGTTAGCTTGACATTGGACATAAGTGCAGACTTGCAGTCACTCTTTACTTGGAACACCAAACAGGTTTTTGCTTTCGTGGCAGCTGAATACAAAACCCCAATGAACTCCCTGAATCAGGTTTCTCTATGGGATGCTATTATCCCTGACAAGGAACATGCCAAGTTCCGCATTCAAACCTCAAACAAGTACCGTTTCATTGATCAGGGACATAACCTTCGTGGAAAAGAGTTCAACTTAACGTTACATTGGCATGTCATGCCCAAGACCGGCAAGACGTTTGCTGACAAGATTGTCATGTCTGGTTACAGTTTGCCAGATGCATACAAATGATGAAAAGACTGAAGAAAGCTTCTAAGAGTTTTTGAATTTCGTTTCTTTTACTCTGTAAAACTACTATTGATCTATTAGATTCTTTTTCTTAATAAAAGCATGACCATGAGAGTTTAGGACGTTGTTTCAACAGAACTATGACCTAAACTTTATCTATTCTTTTGCTG



gi|158654834|gb|EX764725.1|EX764725 RR3CI71TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence

TGACAGAAGAAAGAGAGCACA
|||||.||||||||||| ||
ACTGTTTTCTTTCTCTCTTGA

EST sequence (targeted fragment marked with yellow):
GGGAAGATCAGTTCTCTCTTTCTTTTGTCAGAGATGGAACAGGGTGAAGGAGAAGTCAAAAAGAGAGTTGCTTTTGTCCTGATCGATGGTTTGGGAGATGTCTCAATACCGAGGTTAGGCTACAAGACTCCGCTACAAGCAGCAAACATACCTAATCTCGACGCAATCGCATCAGCTGGAATCAACGGTCTGATGGATCCAGTGGAAGTTGGATTGATGCGGCAGTGACACGGCTCACCTCTCTCTCATGGGTTATGACCCCAGAGTGTACTACAGAGGACGCGGCGCCTTTGAGTCAATGGGTGCAGGGTTAGCAATGTCACCAGGTGATATAGCTTTCAAGTCTAACTTTGCGACGTTGGATGAGGAAACTGGCGTTGTTGTTAGCCGAAGAGCCGACCGTCATTTCGAAGAAGAAGGGCCTATACTTTGTGCAGCTCTTGATGGAATGAAGCTTCCTTCTTTCCCTGAGTATGAAGTGAGAGTCAGATACGCAACGGAACACAGATGTGGAGTTGTTGTAAAAGGGCCAAAGCTTAGTGGGAACATCTCAGGAACAGACCCTTTGAAGGATAACCGTTTGCTTCTCCAAGCAAAACCTCTGGATGAATCAGAAGAAGCCAAACACACAGCTAACGTCGTCAACGAACTATCCAAGAGATATCACGCATTCTTGTTTCCCACCCTGTTAACGCAAGAGACTCTCGCAAGGCAAGAGCATA