| mature miRNA: TGACAGAAGAGAGAGAGCACA species: Arachis hypogaea database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|116359717|gb|EG373521.1|EG373521 2H35 Peanut (Luhua14) seeds full length cDNA Library Arachis hypogaea cDNA 5', mRNA sequence TGACAGAAGAGAGAGAGCACA EST sequence (targeted fragment marked with yellow): GCCATTCATATTTCCCTGTGGTTCTTTGCTTGGTGCTTCCGCGACTAAGCTCGCTCCCCTTTTGGGAAATAATAATAATAATAATAATAATTAGGGTTTCGTGGTTCTCAGCTCGCGCACCCAGTCATGGGAGGAGGCAATGGGCAAAAGGCAAAGATGGCTCGTGAGAAGAACCTCGAGAAGCAGAAGGCCGCAAAAGGAAGCCAGCTGGATTCAAACAAGAAAGCTATGTCGATCCAGTGCAAGGTATGCATGCAGACATTTATGTGCACCACATCAGAAGTGAAGTGCAGGGAGCACGCCGAAGCCAAACACCCTAAATCCGATGTTTATGTTTGTTTTCCTCACCTTAAAAACTAAAAAGTGAACATATTGGGGAGCACAAGTGGAGAGAACTTAATATCATCATGGCCTCTTTCCATTAATCCATTCACAGAGATCCTCCTCATATTTATGTTGGCTGTGTCTGTGTGTTGTGTGGAGAGACAAGAAGGGGAGGGAGAACATTTAATATGATTTTCCCAAATTTTGGGAAGAAACTTGTGATGCTCTCTCTTTTCTGTCACTGTAATGTTTAACGATAATTATTGTTAAATATTAAAGTGTCTCCTTGCCGAAACCTT | |||||||||
gi|207400700|gb|ES720184.1|ES720184 TFR5_11_F02_E001.g1 USDA-Tifton Peanut Library TFR5 Arachis hypogaea cDNA clone TFR5-011-14_ TGACAGAAGAGAGAGAGCACA EST sequence (targeted fragment marked with yellow): AGCTGAAGCTGCTTCATCAGTAAGATCAAGATCATCATCATGAGCAAGAACGAGGACAAACACTACGTGGTGTGGAAGGGAAGGGAGCCAGGGATTTACAAGTCATGGGACGACGCCAATGCGCAAGTTAACGGTTACTCGCGAAACTCCTTCAAGGGCTTTGACTCCTATCCCGAGGCCAAGGAAGCCTATAACCGTCCTAGCCTTTGGGAGAGCGACAAAGGCTCGTCGCATTCCCAAAGTGCGGAGTCTAAAAGCTATGGGAGTTCCACCAGCGGTGTTACGTCTGCCGGATCCTACCAGTCTAATGCCGGTTATCAGTGGCAGCGTTCCAAGAAAAGTTATTATTGAAGATCATGGGATAATTAAGTGTTAGTAGTATGCGTGTTTCATTTCGCGTTAGCGTTTTATCTGTGTTTTTACTCTTCTGTAACTAATGAATAATTGGTAAAATCTTTTTGCCTTNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|225614916|gb|GO340454.1|GO340454 VBL6_62_J01_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga TGACAGAAGAGAGAGAGCACA EST sequence (targeted fragment marked with yellow): ACGTCACTTCTTCAAGCGGCAGTGTTTATCTCAACAATTCTGTGCATCTGTGGAAGCTGAAGCTGCTTCATCAGTAAGATCAAGATCATCATCATGAGCAAGAACGAGGACAAACACTACGTGGTGTGGAAGGGAAGGGAGCCAGGGATTTACAAGTCATGGGACGACGCCAATGCGCAAGTTAACGGTTACTCGCGAAACTCCTTCAAGGGCTTTGACTCCTATCCCGAGGCCAAGGAAGCCTATAACCGTCCTAGCCTTTGGGAGAGCGACAAAGGCTCGTCGCATTCCCAAAGTGCGGAGTCTAAAAGCTATGGGAGTTCCACCAGCGGTGTTACGTCTGCCGGATCCTACCAGTCTAATGCCGGTTATCAGTGGCAGCGTTCCAAGAAAAGTTATTATTGAAGATCATGGGATAATTAAGTGTTAGTAGTATGCGTGTTTCATTTTGCGTTAGCGTTTTATCTGTGTTTTTACTCTTCTGTAACTAATGAATAATTGGTAAAATCTTTTTGCCTTAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|207465109|gb|ES724296.1|ES724296 TFR7_11_C12_E001.g1 USDA-Tifton Peanut Library TFR7 Arachis hypogaea cDNA clone TFR7-011-91_ TGACAGAAGAGAGAGAGCACA EST sequence (targeted fragment marked with yellow): CTCCCCTTTTGGGAAATAATAATAATAAGAAGAATAATTAGGGTTTCGTGGTTCTCAGCTCGCGCACCCAGTCATGGGAGGAGGCAATGGGCAAAAGGCAAAGATGGCTCGTGAGAAGAACCTCGAGAAGCAGAAGGCCGCAAAAGGAAGCCAGCTGGATTCAAACAAGAAAGCTATGTCGATCCAGTGCAAGGTATGCATGCAGACATTTATGTGCACCACATCAGAAGTGAAGTGCAGGGAGCATGCCGAAGCCAAACACCCTAAATCTGATGTTTATGTTTGTTTTCCTCACCTTAAAAACTAAAAAGTGAACATATTGGGGAGCACAAGTGGAGAGAACTTAATATCATCATGGCCTCTTTCCATTAATCCATTCACAGAGATCCTCCTCAAATTTATGTTGGCTGTGTCTGTGTGTTGTGTGGAGAGACAAGAAGGGGAGGGAGAACATTTAATATGATTTTCCCAAATTTTGGGAAAGAAACTTGTGATGCTCTCTCTTTTCTGTCACTGTAATGTTTAACGATAATTATTGTTAATATTAAGTCTCTCTTGCAGAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|116360044|gb|EG373848.1|EG373848 2N28 Peanut (Luhua14) seeds full length cDNA Library Arachis hypogaea cDNA 5', mRNA sequence TGACAGAAGAGAGAGAGCACA EST sequence (targeted fragment marked with yellow): GTTCTTTGCTTGGTGCTTCCGCGACTAAGCTCGCTCCCCTTTTGGGAAATAATAATAATAAGAAGAATAATTAGGGTTTCGTGGTTCTCAGCTCGCGCACCCAGTCATGGGAGGAGGCAATGGGCAAAAGGCAAAGATGGCTCGTGAGAAGAACCTCGAGAAGCAGAAGGCCGCAAAAGGAAGCCAGCTGGATTCAAACAAGAAAGCTATGTCGATCCAGTGCAAGGTATGCATGCAGACATTTATGTGCACCACATCAGAAGTGAAGTGCAGGGAGCATGCCGAAGCCAAACACCCTAAATCTGATGTTTATGTTTGTTTTCCTCACCTTAAAAACTAAAAAGTGAACATATTGGGGAGCACAAGTGGAGAGAACTTAATATCATCATGGCCTCTTTCCATTAATCCATTCACAGAGATCCTCCTCAAATTTATGTTGGCTGTGTCTGTGTGTTGTGTGGAGAGACAAGAAGGGGAGGGAGAACATTTAATATGATTTTCCCAAATTTTGGGAAAGAAACTTGTGATGCTCTCTCTTTTCTGTCACTGTAATGTTTACGATAATTATTGTTAATATTAGTCTCTCTTGCAGAAACATAGATGCTGTCTT | |||||||||
gi|225605912|gb|GO334948.1|GO334948 VBL6_46_M11_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga TGACAGAAGAGAGAGAGCACA EST sequence (targeted fragment marked with yellow): GTTCTTTGCTTGGTGCTTCCGCGACTAAGCTCGCTCCCCTTTTGGGAAATAATAATAATAATAATAATAATAATAATTAGGGTTTCGTGGTTCTCAGCTCGCGCACCCAGTCATGGGAGGAGGCAATGGGCAAAAGGCAAAGATGGCTCGTGAGAAGAACCTCGAGAAGCAGAAGGCCGCAAAAGGAAGCCAGCTGGATTCAAACAAGAAAGCTATGTCGATCCAGTGCAAGGTATGCATGCAGACATTTATGTGCACCACATCAGAAGTGAAGTGCAGGGAGCACGCCGAAGCCAAACACCCTAAATCCGATGTTTATGTTTGCTTTCCTCACCTTAAAAACTAAAAAGTGAACATATTGGGGAGCACAAGTGGAGAGAACTTAATATCATCATGGCCTCTTTCCATTAATCCATTCACAGAGATCCTCCTCATATTTATGTTGGCTGTGTCTGTGTGTTGTGTGGAGAGACAAGAAGGGGAGGGAGAACATTTAATATGATTTTCCCAAATTTTGGGAAGAAACTTGTGATGCTCTCTCTTTTCTGTCACTGTAATGTTTAACGATAATTATTGTTAATATTAAGTGTCTCTTGCAGAAA | |||||||||
gi|207419653|gb|ES767441.1|ES767441 TFL_24_C08_E001.g1 USDA-Tifton Peanut Library TFL Arachis hypogaea cDNA clone TFL-024_C08 5' TGACAGAAGAGAGAGAGCACA EST sequence (targeted fragment marked with yellow): GGTGAGCAGCAACAAGAGAGCATCGTCATCGTCATCATGTAATTGTCAAGTGGATGGGGGCAATGCAGATCTAAGCATTGCAAAGCAGTATCACAAGCGCCATAAGGTGTGTGAGTACCATGCTAAGGCTCACTCGGTTCTCATCTCTCAACAACACCAAAGGTTTTGCCAGCAATGTAGCAGGTTCCATGAGCTATCAGAATTTGATGACTCAAAAAGGAGTTGTAGAAGGCGTTTAGCTGGACACAATGAGAGGCGTCGCAAAAATTCATCAGATTGCCAAGGATAAGAATTTCCAATGATGGTTAAGATGATGAACTTCAATGCACAACATGCATCATATTGAATCCAACAGCATCTAATTGAAATAAATAAACTTTCTGTTGAATATGGTTCCTATTTAAATTAATGCTATTATTTATCTTTGAGGATGCTCTCTCTCTTCTGTCAATATATTTGCAATCCATCCAAATGAAGTTATAAAATAATC | |||||||||
gi|115596628|gb|EG028976.1|EG028976 AH1418 Shanyou 523 Peanut Cotyledon cDNA Library Arachis hypogaea cDNA 5', mRNA sequence TGACAGAAGAGAGAGAGCACA EST sequence (targeted fragment marked with yellow): CAGGGTCACGCGCTATGTGGACCGCGTCATACAGAGTAATCACAGAGAAGTGTTTATCTCAACAATTCTGTGCAACTGTGGAAGCTGAAGCTGCTTCATCAGTAAGATCAAGATCATCATCATGAGCAAGAACGAGGACAAACACTACGTGGTGTGGAAGGGAAGGGAGCCAGGGATTTACAAGTCATGGGACGACGCCAATGCGCAAGTTAACGGTTACTCGCGAAACTCCTTCAAGGGCTTTGACTCCTATCCCGAGGCCAAGGAAGCCTATAACCGTCCTAGCCTTTGGGAGAGCGACAAAGGCTCGTCGCATTCCCAAAGTGCGGAGTCTAAAAGCTATGGGAGTTCCACCAGCGGTGTTACGTCTGCCGGATCCTACCAGTCTAATGCCGGTTATCAGTGGCAGCGTTCCAAGAAAAGTTATTATTGAAGATCATGGGATAATTAAGTGTTAGTAGTATGCGTGTTTCATTTTGCGTTAGCGTTTTATCTGTGTTTTTACTCTTCTGTAACTAATGAATAGTTGGTAAAATCTTTTTGCCTTAGTTTAGTTTTATTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|146772045|gb|ES491166.1|ES491166 87#5M6 Full length peanut pod cDNA library Arachis hypogaea cDNA clone #5M6 5' similar to hy TGACAGAAGAGAGAGAGCACA EST sequence (targeted fragment marked with yellow): TTCTTTGCTTGGTGCTTCCGCGACTAAGCTCGCTCCCCTTTTGGGAAATAATAATAATAATAATAATAATTAGGGTTTCGTGGTTCTCAGCTCGCGCACCCAGTCATGGGAGGAGGCAATGGGCAAAAGGCAAAGATGGCTCGTGAGAAGAACCTCGAGAAGCAGAAGGCCGCAAAAGGAAGCCAGCTGGATTCAAACAAGAAAGCTATGTCGATCCAGTGCAAGGTATGCATGCAGACATTTATGTGCACCACATCAGAAGTGAAGTGCAGGGAGCACGCCGAAGCCAAACACCCTAAATCCGATGTTTATGTTTGTTTTCCTCACCATAAAAACTAAAAAGTGAACATATTGGGGAGCACAAGTGGAGAGAACTTAATATCATCATGGCCTCTTTCCATTAATCCATTCACAGAGATCCTCCTCATATTTATGTTGGCTGTGTCTGTGTGTTGTGTGGAGAGACAAGAAGGGGAGGGGAGAACATTTAATATGATTTTCCCAAATTTTGGGAAGAAACTTGTGATGCTCTCTCTTTTCTGTCACTGTAATGTTTAAACGATAATTATTGTTAATATTTAAGTGTCTCTTGCAGAACC | |||||||||
gi|225606468|gb|GO335447.1|GO335447 VBL6_48_F02_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga TGACAGAAGAGAGAGAGCACA EST sequence (targeted fragment marked with yellow): ACGTCACTTCTTCAAGCGGCAGTGTTTATCTCAACAATTCTGTGCAACTGTGGAAGCTGAAGCTGCTTCATCAGTAAGATCAAGATCATCATCATGAGCAAGAACGAAGGCAAACACTACGTGGTGTGGAAGGGAAGGGAGCCAGGGATTTACAAGTCATGGGACGACGCTAATGCGCAAGTTAACGGCTACTCGCGAAACTCCTACAAGGGCTTTGACAACTATCCCGAGGCCAAGGAGGCCTATAACCGTCCTAGCCTTTGGGAGAGCGACAAAGCCTCGTCGCACTCCCAAAGTGCGGAGTCTAAAAGCTATGGGAGTTCCACCAGCGGTGTTACGTCTGCCGGATCCTACCAGTCTAATGGCGGTTCGCAGTGGCAGAGTTCCAAGAAAAGTTATTATTGAGGAAAGAGAATATGACTCTACTAATGAAGATAATGGGATAATAATGTTGTGATCAGTCTGTTAAGGTTTAAGTGTTAGTAGTATGCGTGTTTCATTTTGCTTTAGCGTTTTATCTGTGTTTTTACTCTTCTGTAAGACTGTAACTAATGAATAATTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|115596853|gb|EG029201.1|EG029201 AH1622 Shanyou 523 Peanut Cotyledon cDNA Library Arachis hypogaea cDNA 5', mRNA sequence TGACAGAAGAG-AGAGAGCACA EST sequence (targeted fragment marked with yellow): GGAAGGTGATTTTCTATCACCTTTCAGATAGAGTTTCTGTTTCATACGTTTCTCTCTCTCTTTCCAAAGTTCAAACCCTTCTTCATCAATTTCATCTCAGCTCCTTATTCATTCATTCATTCCCAATACATCTTCTTTAATCAATAATTTCCTTTCCATTATAAATTATTTTTCTCTTTCCCCCTCTAAGATCTTGTGCCCTTCTCCTCAGATTTATCTTTGCTACTATATATCTTTCCTAATAAATCTAACTCTATATATATAGTTAGATTTATGATCAATATGTTCAAGAAGAGACAAGATCAGATATATACATGCAGGAGAAGAGTGATATACAATTAATGGTCACAAAACGTTGCAAAAGAGGATGATATACAAGTATTTGGACCTCGAAGAGATTATAAATGTTGACAGAAGAGAGAGAGCACAACCCGAGAAATGGTCAAAGAATCTTTTACCTTTGTTGGGAGTGTGCTCTCTACTCTTCTGTCATCATCTTTATCTTTATTTGTATGGTATAGATCTTTTTTCTCTTACTAATCGCTACTATATATCTTAATTACCATTCAAGCCAACTAGCTAAGGTATGTAATGAGGTATAAATTTTCTTTCTACTAAAATGGTGAGAATAAAATTGAGTTGAGTTGGTTTAATAGTTAGCTCACTATTTCGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|149224097|gb|ES713544.1|ES713544 TFR6_18_D12_E001.g1 USDA-Tifton Peanut Library TFR6 Arachis hypogaea cDNA clone TFR6-018-92_ TGACAGAAGAGAGAGAGCACA EST sequence (targeted fragment marked with yellow): AACAATTCTGTGCAACTGTGGAAGCTGAAGCTGCTTCATCAGTAAGTTTTTGAAGATCAAGATCATCATCATGAGCAAGAACGAAGGCAAACACTACGTGGTGTGGAAGGGAAGGGAGCCAGGGATTTACAAGTCATGGGACGACGCTAATGCGCAAGTTAACGGCTACTCGCGAAACTCCTACAAGGGCTTTGACAACTATCCCGAGGCCAAGGAGGCCTATAACCGTCCTAGCCTTTGGGAGAGCGACAAAGCCTCGTCGCACTCCCAAAGTGCGGAGTCTAAAAGCTATGGGAGTTCCACCAGCGGTGTTACGTCTGCCGGATCCTACCAGTCTAATGGCGGTTCGCAGTGGCAGAGTTCCAAGAAAAGTTATTATTGAGGAAAGAGAATATGACTCTACTAATGAAGATAATGGGATAATAATGTTGTGATCAGTCTGTTAAGGTTTAAGTGTTAGTAGTATGCGTGTTTCATTTTGCTTTAGCGTTTTATCTGTGTTTTTACTCTTCTGTAAGACTGTAACTAATGAATAATTG | |||||||||
gi|225615349|gb|GO341151.1|GO341151 VBL6_64_M06_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga TGACAGAAGAGAGAGAGCACA EST sequence (targeted fragment marked with yellow): TCCAAGAAAAGTTATTATTGAGGAAAGAGAATATGACTCTACTAATGAAGATAATGGGATAATAATGTTGTGATCAGTCTGTTAAGGTTTAAGTGTTAGTAGTATGCGTGTTTCATTTTGCTTTAGCGTTTTATCTGTGTTTTTACTCTTCTGTAAGACTGTAACTAATGAATAATTGGTAAAATCTTTTTGCCTTAAAAAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|110812194|gb|EE124884.1|EE124884 EE30 Peanut (Luhua14) seeds full length cDNA Library Arachis hypogaea cDNA 5' similar to hyp TGACAGAAGAGAGAGAGCACA EST sequence (targeted fragment marked with yellow): GCCATTCATATTTCCCTGTGGTTCTTTGCTTGGTGCTTCCGCGACTAAGCTCGCTCCCCTTTTGGGAAATAATAATAATAATAATAATAATTAGGGTTTCGTGGTTCTCAGCTCGCGCACCCAGTCATGGGAGGAGGCAATGGGCAAAAGGCAAAGATGGCTCGTGAGAAGAACCTCGAGAAGCAGAAGGCCGCAAAAGGAAGCCAGCTGGATTCAAACAAGAAAGCTATGTCGATCCAGTGCAAGGTATGCATGCAGACATTTATGTGCACCACATCAGAAGTGAAGTGCAGGGAGCACGCCGAAGCCAAACACCCTAAATCCGATGTTTATGTTTGTTTTCCTCACCTTAAAAACTAAAAAGTGAACATATTGGGGAGCACAAGTGGAGAGAACTTAATATCATCATGGCCTCTTTCCATTAATCCATTCACAGAGATCCTCCTCATATTTATGTTGGCTGTGTCTGTGTGTTGTGTGGAGAGACAAGAAGGGGAGGGAGAACATTTAATATGATTTTCCCAAATTTTGGGAAGAAACTTGTGATGCTCTCTCTTTTCTGTCCTGTAATGTTTAACGATAATTATTGTTAATATTAAGTGTCTCTTGCAGAAACAT | |||||||||