| mature miRNA: TGACAGAAGAGAGTGAGCAC species: Brassica rapa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|150127609|gb|EE528581.1|EE528581 38RDBRM_UP_068_H02_07DEC2005_002 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence TGACAGAAGAGA-GTGAGCAC EST sequence (targeted fragment marked with yellow): GGATGACTAGTTTATCAGCCTCATCCCGGTTTCTTCTTCGACTAAGCTTTAATTTCAAGCCCTTCGTCTGTCTTCTCACCCGAACACAAAACCTTCATGCCATGCAGTCTTCAAACCGGCTCAATCCTAGCCGTCTGATTGATTTCACGGTCAAAGATCTGACGGTGGACAAGCTGCGGCTCATCGAAGTTCCGGATAACGCCACTCTAGCAGACGCCTTAAACGCCATGATGGCAAACCGAGTAAGAGCGGTGCCCGTGGCTGCGGTACCAGGGCAGTGGTTGGGGGCTGGAGGATCCATGATAGTTGAGTCGGACAAAGAGACCGGAAGGTCAAAAGAAACAGTACATAGGAATGGTGACAATGCTGGATGTTGTGGCTCACATCGCCGAAGAGGAGGAAGAGAATGGGCTTGATAAGAAAATGGCTGCTCATGTCTCTTCTGTCATTGGTCATTGCCCTGAGGGTCGAAGCTTATGGTCTCTCAACCCCAAATACCAGC | |||||||||