miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TGACAGAAGAGAGTGAGCAC
species: Gossypium hirsutum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|164367460|gb|ES827222.1|ES827222 UFL_394_30 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||||
ACTGTCTTCTCTCCCTCGCA

EST sequence (targeted fragment marked with yellow):
GGCACGAGAAATTGCAAAGCAAATATGAATAAGGATTCATAGCTGAAGAACTTGACAATGACATGCAAGAAGAAGAAGAAGAAGGTGTTGGGGGTGATCATGGTTTCCCTGATGATGAAAAGAAGAAGAAGGTATGGAGGGAGAGGAGCAGCTGGTGGCGGTGGTGGGGTGTCGCCGCCTGCTTGTCAAGTGGAAAAATGTGGGCTTGATTTATCTGATGCCAAGCGATACCACAGGCGCCATAAGGTGTGTGAGATTCATGCCAAGGCGCCTTTTGTGGTTGTTGCTGGTCTGAGGCAACGCTTCTGTCAACAATGCAGCAGATTCCATGAGCTACCGGAGTTCGATGAAGCAAAACGGAGCTGTCGAAGGCGGTTGGCCGGGCATAACGAAAGGCGTCGGAAGAGCTCAGCTGAATCATCATCAGCAGCAGAAAGTTCAAGTCGCAGAGGGATGATGATCAGTGCTCAACTGAAAGAGTCTCATTACCTAGCTGATGAATCAAGAGCCAGAAGTCATCCAATGGCAATCCATGGCAGTTCATCTNTTAAGCGTTCCCANATCAGATAAGGAAGCTTAAGCGACCAAAACAATACGCTCCCTCTCTTCTGTCATCCGATGGTTCATGTCTTGCACTATGTACTACTTACTAGATTTTAATGGAGGATTTTATAACAATGTCAGGCATTCACTCGATTATCGAGATTCAACAAGTTTGTTTCATGCGAACTTGCCTGCTGTATAATGATGAATATATCCTTTATCTATGGAGTCCTCCATTGTTTTGGCTTCAAAAAAAAAAAAA



gi|164253448|gb|EX171997.1|EX171997 D04_F-25_031 Cotton 1-14 day post anthesis Lambda Zap Express Library Gossypium hirsutum cDN

TGACAGAAGAGAGTGAGCAC
|| |||||||||| |||| |
ACGGTCTTCTCTCTCTCGGG

EST sequence (targeted fragment marked with yellow):
CGCGCGCCTGCAGGTCGATTCNNCTGGATCCAAAGAATTCGGCACGANTTTTGCAAAACCAAAAAGCAGCAGAAACTCCAGCATAGAGGCATTTGCAGTTTGTGAGAATTATTCACCGCCTGGAGGATTCAATCCAAAAGACTTGCATCGTCTCCTGGAAATGGTTGGCAGTCCCTCGGGTGGAGATGATCTAGATTGCAGTAGTGGATGGTTAGAAGGACCAAATAAGGTTTATATTCCATTTTTAGCTTGCGGGGACCTAAGCGGGTACGATTCTGACCGTTCATATCCACTGCCGAAAGTTGCTGATGGAACTTACCAGAGTTTGGATCCTGTCCAGCCTCCCATTGCCCCCCCTTATAAGAGAGCTCTTGAGATGAAGAAAGCTTCCAGTCATGGTATCCGAGACCTTGAAAAGCTTTCTTTGGATGCTTGAATTAAAAAAAGAAGGGTAAACCCATTGTGAGATGGGAGTTTTTAATGTAGAAACAATGATTACTGTTATTGTTTTATATACAATTTACATTCTTTCTATGAAAAGAAAGTGGAGTGCTCTTCTTTCATTAAAAAAAAAAAAAAAAAACTCGAGCAACTCCAGCAAACCTCCTCATGACCATTTCTTGCAGGGTCNCCATGGGGGGACTAGTTTCTCCAGCACTGGAATTTCTCCAGGAAAAGCTTCNCANGGGCTGGGGACTCAAGCTGGGCTCTCTCTCTTCTGGCAAANCAACCGGGGGCTCCNGNACCAGGGTTTNANTTTCTGGAANGGGGGGAAAAAACTGAAGGGCCTTGGGGGAAACCAAAACCTTTNNGGGNAGGGGGANCCTTTTCNAAGGCCCTTGGATTCAAGGGNGGAACCTGTCCAGTTTNCCAAAGGGGCCCCCTAATTNGGCAATCCCAACCTGTAAT



gi|109840083|gb|DW238644.1|DW238644 GH_RTMF_23R_H06_InvR_02Aug04_034_F Root (free) - 3 weeks after planting Gossypium hirsutum c

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||. |
ACTGTCTTCTCTCCCTTATA

EST sequence (targeted fragment marked with yellow):
ACGGTCTCCTAACAATCCAGAAGCTCATATTCAACGACCCCGTCCAAGCACTAACCCCTCTAAAGCAAAAATTCGCATCCCCCTCAACTCAACGAGTCGACTCGGCGGCCCTCGCTGAATTGCTACAGATCTCATTCGACCATTCGCGTCTCGTCCTTGAAACTCTCGCTTCTGTCCTCCACTCGGAACCCGACCCGCTCGTAACCGCCCTGCCGGATGATGTCGACTCCATTGGTGCCGATTTGCGTGATCTGATCCTGTTTTTGTATATTCAATCGTATAAGAGGCTTTTGCCGCGCTCGCACAAGGACTCCGCTGCGGTTGCCGATGTCTGGCCTTCCATGTCAGCATTCGATGGTTACTTGTCGGCCCTTTCGCCTTTGCAGCTTGTCCGCAGCAACAGCCGCCGATTTATGCCATCACAGGCTGATGAAGAGGTCCACCAGCTATCCTATCTACAAAAGCACTTGGCTAATATTCCCTCTCTTCTGTCAGAGCATGTGGAGGGGGAAAGTGAAGAGTCTCTGGTTTTAACTATGGAAGGGTTTGAGCACCTTGGTTTCCTGATTCAGTTTGGTGATAAGGGATCAGAAGTAGTTCCTTTAAGCCAAGCTGCTCCATTTTTTGCTAATTCAGATCCAGACATGCCTGCTGCACCTGTTCCAGTATCACAAGTTCATGATTGGCTTCTGCAGACTATAGCTTCTTCTTTGGAGTCTATTACTGAAAAAGTTTCTGCAAAAGAAAACGGTTCTCCTAGTGGCTCTGACCAGGATGTTGCTATGGCTGATGCTACTCCAAGTTCTGCCAAAGTCTCACTTAGTGCGAGGAGTCCGTGGTTTGTTGAGGGAGTCTCTAAATCA



gi|78346123|gb|DT566397.1|DT566397 EST1077037 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||. |
ACTGTCTTCTCTCTCTTATA

EST sequence (targeted fragment marked with yellow):
CTTAAATCAAAGCGATGGCCGACCCCATCGAACCATCAACGTCATCGAGCGACCCGAATTCGATTCCAATACCGACCGCTATCCTACACCCGCGACGCGAGCCTTTCGAGCACGGTCTCCTAACAATCCAGAAGCTCATATTCAACGATCCCGTCCAAGCATTAACCCCTCTAAAGCAAAAATTCGCATCCCCCTCAACTCAACGAGTCGACTCGGCGGCCCTCGCTGAGTTGCTACAGATCTCATTCGACCATTCGCGTCTCGTCCTTGAAACTCTCGCTTCTGTCCTCCACTCGGAATCCGACCCGCTCGTAACCGCCCTGCCGGATGATGTCGACTCCATTGGTGCCGATTTGCGTGATCTGATCCTGTTTTTGTATATTCAATCGTATAAGAGGCTTTTGCCGCGCTCGCACAAGGACTCCGCTGCGGTTGCCGATGTCTGGCCTTCCATGTCAGCATTCGATGGTTACTTGTCGGCCCTTTCGCCTTTGCAGCTTGTCCGCAGCAACAGCCGCCGATTTATGCCATCACAAGCTGATGAAGAGGCCCACCAGCTGTCCTATCTACAAAAGCACTTGGCTAATATTCTCTCTCTTCTGTCAGAGCATATGGAGGGGGAAAGTGAAGAGTCTCTGGTTTTAACCATGGAAGGGTTTGAGCACCTTGGTTTCCTGATTCAATTTGGTGATAAGGGATCAGGAGGAGTTCCTTTAAGCCAAGCTGCTCCATTTTTTGCTAATTCAGATCCAGACATGCCTGCTGCACCTGTTCCAGTATCACAAGTTCATGATTGGCTTCTGCAGACTATAGCTTCTTCTTTGGAGTCTATTACTGAAAAAGTTTCTGCAAAAGAAAACGGTTCTCCTAGTGGCTCTGACCAGGATATTGCTATGGCTGATGCTAGTCCAAGTTCTGCCAAAGCCTCACCTAGTGCGAGGA



gi|164356758|gb|ES849254.1|ES849254 UFL_676_64 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||. .||||
ACTGTCTTCTCTTTTTCGTC

EST sequence (targeted fragment marked with yellow):
GGCACGAGCTCAACTAAAATTTGATCTGCTCTGCTTTTTCTCTTCTGTCAATTCCTTTTCTTTTCCTTCACTCTCTCACTTTGACAGACAGAGCAGGTCCTCCGAAGGCAGAGAGAGGTTCCGAGACTACCAACTGACTTTTAGACCTGGATATTCATATCTCCGAACACATGGATTAGATTACTGATCGCATTCCTTCAACATCTTTTCCTTTTTTCTGCATATAACAGTTCAGCGCGTCACACAAATCACTTATTAGCTGTGATATCGTCCTTAAAGGGCAGAGTGAAGAGCTGAGCCCATCGACTAAGTGTTAGACTTGGATATTCCAAATACATGGATTGGAAGCACTCAACAGAACCAGTTGAAGGCAGAAATGACGAATATACACTTATTAGAGATGCAGAAGACCTGCGCCTGGGGATGTACGATAAACCTCTTCCTTGCTTTGGCTGTGGAATAGGATGGTTTTCGCTTCTGTTAGGATTTGATTTCCCTTTCATGTGGTATTATGCTACCATTCTCTACTTTAGAAGCTACTACCACAGAGATCCTAGGGAGAGAGCTGGACTTGCTGCCTCTGCAATAGCTGCAATGATATGTACAATTGCTGTAATAATCACAATAGCAGTTCTGATCTTCTAATTCTTGCCACTGCAGTCTGTATATTTACCACTGCATATTGTGCTTCCTTCAACATATG



gi|78343421|gb|DT563695.1|DT563695 EST1074335 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
CTTTGAAGATGTTTGCACAGGAAGCAATTCAAAGACTTCATCTTATTCAGCCACTCCTGGACCATCCCCTTCCCCGGCAAAGAGATCCAAACCCAATTGTCAGACAAAACATATTCTGCGTTGCCAAGTCGAAGGCTGTAACCTTGACCTTTCTTCGGCTAAGGATTACCATCGGAAACACAGAGTTTGTGAAAGTCACTCAAAGAGCCCTAAGGTTATTGTAGGTGGTCTGGAGCTCCGGTTCTGCCAGCAGTGTAGCAGGTTCCATGCTCTGTCAGAGTTTGATGAAAAGAAGCGAAGCTGCCGCCGGCGTCTTTCTGACCACAATGCAAGGCGCCGCAAACCACAGACAGATGCAATCCACTTCAGTGCTGCAAGGCCTTCACCAGCAGCATATGATGGGAAACAACTGATGAGTTTTGTCTGGAATAAAGTGCCATTTCTTCATAATGCTAGGCCCAATGAAAATTTTACATGGGAAGGCACATTTGTCTCCAAGTCCTCTGAAACGAAAGGTTATGCACCTACAAAAGCGGGAAATGCAAATGGACAGCTGCAACTGCCAGGCAACCAGCTGTTGAATTCCATGACATCTCGGTGTTACGATTCCAACAGATTCCTGCCTGTAAAGGGCAAGCAAAACACAGTTGAGGTTCTCAACCAAGGTGTAGAAGAATCCACAGTTGCTTCAAATATGGGTACGACGCAAGATCTTCATCGTGCTCTCTCTCTTCTGTCAAATGAGTCTTCGGTTTCTTGTGAGCCAAAACAACATGGTTCACTTGCGTACCCTGTGCATGTTAGTGGTAGCAGCATGTCTCAGCCCACGATGAATGTGATTTCGCAGAGTTTCCCCATTCCATATGCCTTATCTGAAAACTGGCAGATGGAACAAGAGCAGACTACTCAATCCC



gi|109872376|gb|DW501351.1|DW501351 GH_TMIRS_055_G11_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
GGGCAAACGGATAAAAGTTGAAGATGGGACGGATTTTAGCCCTCTTTCTGCCATACCTGTCAAGAACGGGGGGCATTTTGAGAAACATTTTCCCTATTTCCATAATGGGCCTAGTGCAGTCACTGGAGGCATTTTAGGTGAGAACAATGCACGATATCCTCATGGTTTTGATGGGACGTATTCTGGATCACGGCCTTTGTTCCAAGGCACCTCCTCGTCAGCAAGTGAAGACATCAATGTTTTCGATGCAGCATTGAGCATTCAGGGATTATCTGGGATTTCAGATTCTGTTTGTGCTCTCTCTCTTCTGTCATCTCAATCACACAGCTCTTCAAGCCGCTCATCAGGAATTCCCATGGCCCGTTCCCTGGTTATTCCGGGCTACCATAACCATCACATGACTCAAGTCTCGGAAAAGCTCGACAGAGTATCGAATACGATCTCTTCATCAGGGATCAATTCAACCGAAGGCGGTAACATGGGTGCTATACTGATATCTGATAGTAGTGAAGCTGCCAACTTCAATATCACTGATGGACTATCATGCAAAGATGGACCGACGATCAACTTGCTTCAGCTTTCATCGCAGCTTCAGCGAGTGGAACATCAAAGACAATCTATGCAAGAAGACAATGAAAATGAGACCTACCTCCGAATCGTTTAAGTACAGATTAAGACAAGTTCAATGTTGCTGAAAGCTGCACAGTTCTTGAGATGTCCGAATAGTCGGCGTAACATAGATGGAAGCATGATGAGAAAGTTCAGCAGCTGCTAACTGGATTCCCTACCCCACCCCTCCACTCGGTTAAGTTTCACCTAGACTTTTACAAGTTATTTTGTAATCGAAAAAAAATTGTTTGATTATGTTTCTCGAATTAAAAATGTTTTGAT



gi|164269996|gb|ES797274.1|ES797274 UFL_515_65 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||| ||||||||| ||||||
ACTATCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
GGCACGAGCAGGGGGAACTGGTGTTCCTAGTGGCCGGATTCCTCCGGGAGAATGCTTCACGGGAGTTGTTGACTCAAACTGTGCTCTCTCTCTTCTATCAAATCAACCATGGGGCTTCAGAAATCAGGGATTGACTCTTGGGTTAAATGACATGATCAACTCCGAGCTTTGTTCAATGTCTCAACCAGCAATGCCTCATGGTGCAGTTACGAATCCTTACTCAAATGCCTCTTGGGGTTTCAAGGGCAACCACTCCTGTAGTCGCTCCCAGGATATGCTGCCTCAAATCCCAGAGCCTATTAACAGTCAATTGACCGGGGGACTTCAGTTGTCTCACCAAAGCAGGGGGCAATACATGGAGCATGAGCCATCTAATGCGGATGACACCTCCATGCAGCATAATCACCAATCCTTCTAAGTCTGCTGTGATAATCATTCCTGCAAATATTGGTCAGTTTTTGTGCCCAGTCTTATTTAGTGTGTGATTTATGGTGTTTCTGGCATTATCGTTTCCTTTTTGGGATGGAGTTTGTTAAAAACCCAAACTACCCCATCATGTTGTGTGTGCCTATGGTTAAAACATGATTAATAGGTGAGAAAAGTTTTAGCCTAAAAAAAAAAAAAAAAAA



gi|78336422|gb|DT556696.1|DT556696 EST1067336 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
TGAAGGGGCACTAGGCAAAACTCATGGAAATGGGTTCGGGCTCTTTGACTGAGTCGGGCGGTTCTCCCACCAACTCTTCCGCCGAGTCACTCAACGGCTTGAAGTTCGGTAAAAAGATCTACTTTGAGGATACAGCCGCTGTCGCCGCCGCCGCTGGTGGTAAAAGTGTTGGTGGTGGTGCAAACATAGGGACTCCATCCAAGTCCGGTCCAGCATCTTCAAGCTTAGCCGGGTCGTGTAGGAAAGCCAGGGTTGATGGAATGGCGCAAGGGGTTCTGCCTTCTAGGTGTCAAGTAGAAGGGTGTAAAGTGGATCTGAGTGATGCTAAGGCTTACTATTCAAGGCATAAGGTTTGTTGTATGCACTCTAAGTCATCTAAAGTCATTGTTGCTGGTCTCGAGCAAAGATTTTGTCAGCAGTGTAGCAGATTTCATCAGCTTTCTGAATTTGACAAAGGGAAACGGAGTTGTCGTAGACGGCTTGCAGGTCACAATGAGCGACGCAGGAAACCACCACCTGGATCATTATTTTCCTCTCCTTATGGCCGGCTTTCTTCCTCTATTATTGAAAATGGCAGTAGAGGTGGAAGCTTTATAGTGGATTTCTCAGCATACCCAAGGCTTTCAGGAAGGGATGCATGGCCAGCAGCTCGATCGTTAGAATGCATAACTGGAAATCGAAGCACAGCCACTGGAAGCTCATTTTCACATCCACGGCAAAACAACTCCAGCAAACCTCCTCATGACCATTTCTTGCAAGGTTCACCATGTGGGACTAGTTTCTCCAGCACTGGAATTTCTCCAGGAGAATGCTTCACAGGGTCTGGTGACTCAAGCTGTGCTCTCTCTCTTCTGTCAAATCAACCGTGGGGCTCCAGGAAC



gi|5045402|gb|AI726550.1|AI726550 BNLGHi6118 Six-day Cotton fiber Gossypium hirsutum cDNA 5' similar to (AC004411) putative squa

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
GGATTGCAAGAGAAATGGAAATCAATTTCATAAAGTGCTCTTATCCTGCCTGCCCCTTGTGTTCAATTCTTTTTTTGTTGCATTTCATAATGATAAGTGATTAGTTTATGGTGAATGAAGGTTTCATTGTTTGGCGGAGTTTGATGAAGGAAAACGAAGTTGCAGGAAGCGTCTCGATGGACATAACCGAAGACGGAGAAAACCTCAACCTCAACCTCAACCTCATTCTCTATCTGTAAATCCAGGAAGATGTCTTTCCAATCTCCAAGGTTCTAGACATTTACCGTCCAGTAGTCCCCAAATATTTGCCACTACTGCCATAACCTCTTCTTGGTTGGGAACTGCCAAAATGGAACCTGATATAGGCTCGGAATCCANCCGAAATGGTTTCTTCCGTGGATCCTTTCCACACAGCTACAAAAGGGAAGAACAGTTGTCATTATTACAAACCAATCATTCATCACTCCATGGAGTTTCTGTTTATCAGTTACCTTTATTAAGCAATGGTGTAGGCAGCAGCCAAAAAATGTTCTCAAATGCGATCGACTCCGATCGTGCTCTCTCTCTTCTGTCATCACAGCCGGCTGAGAACTCGGAGATTGGTTTGAAAACCATGGTGCTATCTGGTCCAACTTCATCACTGATCCCAAACATGCAATATAATGGTGTANCAATGGAAGGTGAGCATGTTTTTGGCACTNNGACGCATGATAACACAACATCTATGGACAAAAAATGTTTGGATCTGCAAATGTC



gi|78348143|gb|DT568417.1|DT568417 EST1079057 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||| |
ACTGTCTTCTCTCTCTCTCG

EST sequence (targeted fragment marked with yellow):
CAGGTGGTTCTTCCTCCAACTCCTCCACTGAGTCACTCAACGGCTTGAAATTTGGTCAAAAAATCTATTTTGAGGATACATCAGCTGGTGGCACCGGTGGTGGTACAACCATGGGGACTCCACCCAAGTCGGGTATCGGGTCTTCAAGCTCATCCGGGTCGGGTAAGAAGGCCAGGGGTGGAGTAGTGCAAGGTGGTCAGCCTCCAAGATGTCAAGTAGAAGGTTGTAAAGTGGATCTGACTGATGCAAAAGCTTACTATTCAAGGCATAAGGTTTGTGGTATGCACTCGAAGGCAGCTAAAGTCATTGTTGCTGGTCTTGAGCAAAGATTTTGCCAGCAATGTAGCAGATTTCATCAGCTTCCCGAATTTGACCAAAGGAAACGGAGTTGCCGTAGACGGTTAGCAGGTCACAATGAGCGACGGAGGAAACCACCACCGGGATCATTATTATCCTCTCGTTATAGCCGGCTTTCTTCGTCTATTATCGAAAGCAGCAGAGGTGGAAGCTTTATCATGGATTTCACATCCCATCCAAGGCTTTCCAGAAGGGATGTGTGGCCAACATCAACATCATCGGAACATGTACCAGGAAATCAATACACTGGAACAGGATGGTTGCATCCACATCCATGGCAAAACAACTCAGAGAATCCTCCACCTAACCTTTACAGGCAGGAATTACCAGGGGGAACTGCTGTTCCTAGTGGCGGGATTCCTCCGGAAGAATGCTTCACGGGAGTTGTTGACTCAAACTGTGCTCTCTCTCTCTTCTGTCAATC



gi|164260549|gb|ES835075.1|ES835075 UFL_005_16 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| |||||
ACTGTCTTCTCTCTCTCGTA

EST sequence (targeted fragment marked with yellow):
AAAAGGCAAAAGAGGGTCCAGTACGGTGGTCGGAGGCTCCTGTCTTCCAGCCTGTCAGGTCGAGAACTGCACTGCCGACATGACCGATGCCAAACGGTACCATCGGCGACATAAGGTGTGTGAGTTCCATGCCAAGGCTGCTGTGGTTCGAGTTGCTGGGATCCATCAACGCTTTTGTCAACAATGTAGCAGGTTCCATGAGTTATCAGAGTTTGATGAAACAAAAAGGAGCTGTCGACGACGTTTGGCCGGACACAACGAGCGCCGTCGGAAAAGTTCATCGGAATATCATGGAGAAGGCTCAAATTTTTAAAACTAGCTAAGAAGGCAAGCCTAAGATATATATATATATGCAAAAAAGAGTCAATTCAGTCTTGAATTTAATATGATCCTATGTATGGGAATGGACTTTCCCAGATGATCATGTAACTATATGGAATTTACTAATTAAGCATGCTCTCTCTCTTCTGTCAATCTTAATTTTACCCCTATAATAATGTCACCTTTTTCATGCTTGCTCTAAAAAAAAAAAAATAAAAAAAAAAAAACAAAACAACCCAAAAAAAAACTACCGAAGAA



gi|78342281|gb|DT562555.1|DT562555 EST1073195 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||| |
ACTGTCTTCTCTCTCTCTCG

EST sequence (targeted fragment marked with yellow):
AAAAGACCCCATGAACGGGCTGTAGGCAGGCAGAGCTCATGGAAATGGGTTCGGGCTCTTTGACAGACTCAGGTGGTTCTTCCTCCAACTCCTCCACTGAGTCACTCAACGGCTTGAAATTTGGTCAAAAAATCTATTTTGAGGATACATCAGCTGGTGGCACCGGTGGTGGTACAACCATGGGGACTCCACCCAAGTCGGGTATCGGGTCTTCAAGCTCATCCGGGTCGGGTAAGAAGGCCAGGGGTGGAGTAGTGCAAGGTGGTCAGCCTCCAAGATGTCAAGTAGAAGGTTGTAAAGTGGATCTGACTGATGCAAAAGCTTACTATTCAAGGCATAAGGTTTGTGGTATGCACTCGAAGGCAGCTAAAGTCATTGTTGCTGGTCTTGAGCAAAGATTTTGCCAGCAATGTAGCAGATTTCATCAGCTTCCCGAATTTGACCAAAGGAAACGGAGTTGCCGTAGACGGTTAGCAGGTCACAATGAGCGACGGAGGAAACCACCACCGGGATCATTATTATCCTCTCGTTATAGCCGGCTTTCTTCGTCTATTATCGAAAGCAGCAGAGGTGGAAGCTTTATCATGGATTTCACATCCCATCCAAGGCTTTCCAGAAGGGATGTGTGGCCAACATCAACATCATCGGAACATGTACCAGGAAATCAATACACTGGAACAGGATGGTTGCATCCACATCCATGGCAAAACAACTCAGAGAATCCTCCACCTAACCTTTACAGGCAGGAATTACCAGGGGGAACTGCTGTTCCTAGTGGCGGGATTCCTCCGGAAGAATGCTTCACGGGAGTTGTTGACTCAAACTGTGCTCTCTCTCTCTTCTGTCAAATCAACCATGGGGCTCCAGAAA



gi|164251838|gb|ES847167.1|ES847167 UFL_141_21 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
ATCAAACACCTGCGAAAGCTTCCATTTGCCAGCCAGTCCTCGGGCGTGTTGCACCTTTCTCGGAAGGCAATGGGGGCTGCCAGAGCATGTTATGTGACAGGCTAACAACTCAAGTTCGGGATTCGGATTGTGCTCTCTCTCTTCTGTCATCTCCACTGTCGCATACATCTGGGATGGGGGTTGAGTAACATGGTGCAGCCTCAGTCATTCCCCTTGGTGCAATCCTTGGGTCCGAGCCTACAAGACCACATTATAGAGCCTATGGGTTCGGTCGTTGCTAATGGCTGGGAGACTACGGTCCATGGCTCAGGAATGTTTCACATGGGTTCTGGTGGATCATCTGCAAGTGAACCCCCTGAAAATCTTGGCTTTCATTGGCAGTAGGAAATTTGAAAGTCGCCGTAACAATAAATTGCCAAAGCTATAATATTGGTACATTCGAATTTAAACTCACGAGTTTCGGGGTTTTTTTCAGGTGTGTTTTAATTTGGAGATGTTAATCTATTGAATGTTACTCTTAAAAGTAGATGCGAGTATTACTTTGATTAAACTTTGGGTCCCAATAATAGACATTTAGTTGGAATGATACATGGCAATCATTTTAGTAGTGGAGAGAATCATGTTTGGGATTTAAAAAAAAAAAAAAAAAAACTCGAAAGTACTTTCTAAAAGCGGCCCGGCGGCCCCCATCGAATTTTTCCCCCCCGGGTGGGGGGTACCAAGGAAAAGGTGTAACCCAATTTCGCCCCTAATAGGGGAAGCCCGTAATTAAAATTTTCCCTGGGCCCGCTCCTTTTTTTAACAACCGCCCGGGAACTGGGGAAAAA



gi|84173586|gb|DR462234.1|DR462234 CM105G10 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
CCTTTCTTCTGCTCGAGATTACCATCGGAAACACAAAGTTTGTGAAAATCATTCAAAGAGTCCGAAGGTCATTGTAAGCGGTCTGGAACGCCGGTTCTGCCAGCAATGTAGCAGGTTCCATGCGCTGTCGGAATTTGATGAAAACAAACGAAGTTGTCGTCGGCGACTTTCCGACCACAATGCGAGACGCCGCAAACCGCAAACTGAAGCTACCCACTTCAATGCTGCAAGGATTCCATCGTTGTCATCCTCGTCATATGATGGGAAGCAACGTACGAGTTTTGTCTGGAATGAAGTCCCAATTCTTCATAATGCTAGACCCAACAAGAAATTTGCATTGGAAGGCACGTTCTACTCCAAGTCCTCTCAAATGACAAGTTATACGCCTACGAAACTTGGAAACATCAATGAACAGGTGCAACTTCCAATCAATCAGCTGTCAAATCCCATCACGATGCGATGTCATGATTTCAACAAATTCCTACCCTCTAAGGGTAAGCAAAACACGGCTGAGGTTCTTTGATGGAGGTGTTGAACAATCTATGGTTGCTTCAAACACCGGCAGAGCTCAAGAACTTCCACGTGCTCTCTCTCTTCTGTCAAATGATTCCCACATTTCCAGGGAACCCAACCCCGTTCCC



gi|164260183|gb|ES799263.1|ES799263 UFL_560_83 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
CTTACTATTCAAGGCATAAGGTTTGTTGTATGCACTCTAAGTCATCTAAAGTCATTGTTGCTGGTCTCGAGCAAAGATTTTGTCAGCAGTGTAGCAGATTTCATCAGCTTTCTGAATTTGACAAAGGGAAACGGAGTTGTCGTAGACGCTTGCAGGTCACAATGAGCGGCGCAGGAAACCACCACCTGGATCATTATTTTCCTCTCCTTATGAAAATGGCAGTAGAGGTGGAAGCTTTATAGTGGATTTCTCAGCATACCCAAGGCTTCCTGGAAGGGATGCATGGCCAGCAGCTCGATCGTTAGAATGCATAACTGGAAATCGAAACACAGCTACTGGAAGCTCATTTTCACATCCATGGCAAAACAACTCCAACAAACCTCCTCATGACCATTTCTTGCAAGGTTCACCATGTGGGACTAGTTTCTCCAGCACTGGAATTTCTCCAGGAGAATGCTTCACAGGATCTGGTGACTCAAGCTGTGCTCTCTCTCTTCTGTCAAATCAACCGTGGGGCTCCAGGAACCAGGCTTTGAATTTTTCTGTAAATGGCGTGATAAGTACTGAAGGGTCCTCTGCGGCACAACCGACAACGCCTCATGGTGCAGTTGTGAACCCTTATTCAAATGCCTCTTTGGATTTCAATGGCAGTGACACTGTTCGCAGTTCTCACAAGATGCTGCCACACCTAGATTTGGGTCATATCCCAGACCCTGTTAACCGTCAATTCTCTAGCGACCTTGAGTTGTCTCAACAAAGCTGGAGGTCATATATGGAACTTGAGCAGTCCAGGGCAGCCTATGACGACTCCATGCAGCATATCCACTGGACGCTCTAAGTTTGTCAGTCCTGGAGGCGGTTTTCATGCCCGGGTTTTTTGGGCATGTATGGCAAATGGGGTTTTCTGGGCATCTGGTTTTATGGGTTTTAAAGTCGGAGTTGGATAAACCCCAAACTATCCCTCTTATCTGCTTGGTTAAGGTTTTAACTGGTGGAAACGAAGGGGTTCCCTGGGCCTAACAATTAATTTCGAACCATCCTTGGCTTAAATTATTTTAACAATTAATTGGGGGTTTTGGCCCTGGCCCCAAAAGAAAGGGGTTCGAAAAAGTAAGGAATCCCAGGCCCTTCTTGGGACAAAATTATTTTTTGCCCCACATTTTTTGTTAAAAAAAAAAAATACGCCGATGGGGGTGGGTGTGGCCCCCTCCCCAAAACTATCCTTCCTCTTTTGTAAAAAAAAAAAAAAAAAAAA



gi|84174893|gb|DR463541.1|DR463541 CM119E08 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
..|||.|||||||||| ||
GTTGTTTTCTCTCACTAGTA

EST sequence (targeted fragment marked with yellow):
TCTCCAAAAAAGTTGTGGAGAAAAAAATATTACGTTTGGGGAAGCGAGAAAGTGCGAGAAAATGAGCGGAGCAGGAAAGAAAGTAGTAGATGTGGCTTTCAAAGCAGGAAAGAGCATTGATTNGGGGGNAAAAAAACACCACCAACCACCCACCCNNCGGTGTGGTCGCAGCGTGCGGCGTACCCCGGCGGCGCACCCACAACACAACACCTCCCGGCTCTTTTTTTTTTTTTGTTGGCTGCACANCCCTGTCGGGCTCTCGCCTAACCCCCCCCCCCGCAACTCCCGGCCCCTTCCCCCGCTCCAAACAAAAAAAAANAGAAAAAAAAAAGTGCGCGGGGGGGGGCGAATGAACCAGCACCCAGCACTATAACAAATGTATTTTATTTTTTATTNATGATTATTTTATATAGCAGCATTTTTTTTAAGAGAGATATATTGTGGGGCGGGCGGGCCCGAAGATGGGGGGCTGGGCGTAACTCACACATGTTTTTTTTTTTTTTCCCCCCCCCCCCCATAGANTATTTTTTTTCTCCCCCCGAGCGCCCCCCCCCAGGGTGGGGACGCAGCAGACAACAAACAAACAAACACACATGATCACTCTCTTTTGTTGTGTTTGTCCGCGTGTGTCGCGTACA



gi|164287746|gb|ES837629.1|ES837629 UFL_034_30 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||.|||||||||| |||
TCTGTTTTCTCTCACTGGTG

EST sequence (targeted fragment marked with yellow):
CTTTAGCTATCTCTTGCCGTTTCATTTCCATTCCATCAAATCCTTTCAATCAGGATTTCGTGGCCATCTTTCTCCTGAGTCCAGATCTTCTCTCGTCTCTTCCACCAGGTAACTCCCTTCCCCTTTTCTTAGTGCCTCTTTCGTCAGGTCATGCGCCTTACCATTCTCTGTTCTTTGTATGAATCGAAAAACAATGTTTTGGAATCGATTTTTGTTGTTCTGAATATCAATCATGATCGCACTTAGAACCGATTTATCTCTGACCCCTACTTTGCACTTGTTGATTATTGTTTTCGAATCCCCCATTACCGTGACTGAGTTAAAGCCCAATCTAATGCCTAATCTGGTTGCTTCTAAACATGCCAATGTTTCTGCTACAAACGGAGAGGAAACGTTGGAGTGAAGAGTGGATTTAGAGACTACGATTTCCCCATTTTGACCCCTGGCTACCATTCCTGATGCTAATCTGGAGTTGTTGGTGTCGAAAGCTGCGTCAAACTGTATGGACCTCCCTAGTACCTCTTCTCTGTGTTCGGATCTACCAGTCGTTGTGCATCTGATTGCTCGAGCTCCAGATAACCCATAAGGTGCAACAAAAAATACGGATCTGCTCCTTTGTTCCTCTACTGAATACCCAAGACATTGTCTGAACACATGAAAGCTGTCTTCTTCTTCAGAACAACCACGTGGACACCTTGCAGTAGTGGTCACTCTCTTTTGTCTGAGGTTAGCAAGTGAAGGGATGTAGTTCCAAGATATTCGCCATACGAGAATTAGGATTTTTTGTTGGTAACTGTAAACCTCCATAAATTTTCCTGTAAAAATCTTTGGGTATCGGGTCTGGTATTAAAATAATTAACTAAAGAATCCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAA



gi|164309687|gb|ES848437.1|ES848437 UFL_155_08 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||.|. . ||
ACTGTCTTCTCTTATATTTG

EST sequence (targeted fragment marked with yellow):
CCTAGGTACGTTTGCTTTGGGATGCTTCGAGAAAGAACAACTTTGAACTTCATGTTATGGAATCGGAAGCACAGGACACTGAGGATAGGGTGGAAGCTGTTAATTTAAAAGTTGAAAAGATGGCAGAAGTTGTTACAGAACAATGGATTCAAATTCAACATCTTGAGCAGGCGCTTCAACTTGCACAAAGGAGAGCATTGCAAGATCAAAGGCAAAGGTACATGAGATGCTCATTCTTGAAGTTCTTTAATGACCTTTCTGAAAGACATCTTCCAAAGATGCTCGGTGCATTGGAATATTATTCATTCGGAAAAGGATCTACCATTAAGTACTACATGTCTCAAGCTCTGCAACAATTGAGAAGATTTTACTCAACAATTAAAAAGTATCACCATCAGTTGCAAGGTTTCATCAAACAAGAAATGCGAAGAAATGAATTTACTGCAGCTTTTGTCAATGATGAATTGGTATTCTTTCTGGCTTCCGCATTGATTACCTTCCCTGTACTGGGTGCTTGGATGGTGCTGTCATCACAGTTCAGCTAGGTCAAGAAATCTCTTCCATTGCAGTTTATATTCTCTTCTGTCATCTAGAATATAGAATCTGATTCCGCACAGCTAAAAGGTGAAAGATGAGTTGGGACACGCACACACCACAGCACCGGGTCAATCGGCGTATAATCATCACATCAGCGGTAACCAGCAACACGAGTTTATTCCAGTGTCCATATTAATACAATATGATATGTACTTTTGAAATTTGCAGCCTGAGTTTTTCACGCTCGGAAATTGAAAAAGTTACCATCACGCTGGCTAGCTGCTACATTTTGATTTTACTTTTTATGCTTTTAGCACCACAATTAGAGCTTTAC



gi|164336040|gb|ES806239.1|ES806239 UFL_639_51 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| |||||
ACTGTCTTCTCTCTCTCGTA

EST sequence (targeted fragment marked with yellow):
GGCACGAGCTCCTCTTTTCTTTTGTGATTTTTTAAGCAAAACCCAGAAATGGCAACAAGCAAAGCTGAAGGGAAAAGGAGACTGAAGGAAATGGGGGAGGAGGAAGAAGAAGAAGAAGAGGACGAGGATAATAGTACTACTGGTGACGATGACAAGAAGAAAAAAGGCAAAAGAGGGTCCAGTACGGTGGTCGGAGGCTCCTGTCTTCCAGCCTGTCAGGTCGAGAACTGCACTGCCGACATGACCGATGCCAAACGGTACCATCGGCGACATAAGGTGTGTGAGTTCCATGCCAAGGCTGCTGTGGTTCGAGTTGCTGGGATCCATCAACGCTTTTGTCAACAATGTAGCAGGTTCCATGAGTTATCAGAGTTTGATGAAACAAAAAGGAGCTGTCGACGACGTTTGGCCGGACACAACGAGCGCCGTCGGAAAAGTTCATCGGAATATCATGGAGAAGGCTCAAATTTTTAAAACTAGCTAAGAAGGCAAGCCTAAGATATATATATATATGCAAAAAAGAGTCAATTCAGTCTTGAATTTAATATGATCCTATGTATGGGAATGGACTTTCCCAGATGATCATGTAACTATATGGAATTTACTAATTAAGCATGCTCTCTCTCTTCTGTCAAAAAAAAAAAAAAAAAA



gi|164255703|gb|ES824813.1|ES824813 UFL_412_30 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
|.||||||||| |||||||
ATTGTCTTCTCCCACTCGTC

EST sequence (targeted fragment marked with yellow):
GGCACGAGTTTTCTTCTTCCTTAATACTATTTTCATACTTCCATCTTATCAAAACCAATCCCGTCCCACTGCTCACCCTCTTCTGTTACAGAGATTCCTTCCGGACTTCTCTTCTTCATAACATATTTCAAATGGAGAAAGCATCCTCACCAGAGGCGTCTCCCAAGCCTCACCACAAGAAAAGCTTTGTTACTACTTTAATGGAAGCTGCCACTCTCCGCTCTCCTTTTAAGGAAGATACCTACTTCATCTACCATTTGAAGTCTTCCGAGAAGAAGTCCTTGCAAGAACTCAAGGACAAGCTTACGGCCTCTCTTGGCCCCGGCGGCCAATGCACCATGTGGGGCATCCCTCTTCTCTCCGATGACGAAAAAGCCGATGTCATTTTGCTCAAGTTCTTGCGAGCTAGGGACTTCAAGGTCTCCGACTCCTTTCACATGTTGGAGAAATGTCTTGCCTGGAGAAAAGAGTTCAAAGCAGACAGTGTGACGGAGGAGGAGTTGGGGTTGGAGGAGCTGGAGGCAGTGGTTGCTTATATGCATGGCTATGACAGAGAAGGCCACCCTGTTTGCTACAATGCCTATGGGGTTTTTAGAGACAAGGACATGTGTGAGAGAATGTTTGGGGATGAAGAGAAGCTGAACAAGTTCCTGAGATGGAGAGTTCAAGTTATGGAGAGAGGAATCAATCTGCTGCATTTCAAGCCTGGTGGGATCAACTCTATTATTCAGGTCACCGATCTCAAAGACATGCCCAAAAGAGACCTCAGGGTCGTTTCTAATCAGATCCTCTCTCTCTTTNCAGATAATTACCCTGAAATGGTTGCTCGTAAGATTTTCATCAATGTCNCATGGTACTTCAGTATGCTGTATTCAATGTTCAGTCCATTTCTAACTCAGCGAACTAAGAGCAAGTTCGTGATCTCCAAAACAGGATATGCAGCTGAAACACTCTACAAGTTTATAAGAACCGAGGATGTTCCAGTACAATACGGAAGGGCTGAGTCAAACTAATGATTCGCAAAACGGTCCTCCAAAACCAGCCTCGGAGTTCCCGTGGAAAGGAGAAAAAAAAGTGAAATTCAAATAAAAAGAATTGGAGGGAGGGGGCACCCTAAACTGGGAATCGGGGGATAAGGAGGGGGGGGAACTTGGAAAAAACAGGGGGGAATTTTCGGGCCCAATGGGGAAAGGGAGCCTACCCCCATTTTGCGGGGGGGAAAAGGGGGCCAAAAAAAATTTGGATTCCCCAGGGGAGAAAAAAGAGCCCATTTTCTAAAAAACTCTTTTTTTTCTACACTCCACAAAAAAA



gi|164273618|gb|ES842145.1|ES842145 UFL_084_81 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
ATCAAACACCTGCGAAAGCTTCCATTTGCCAGCCAGTCCTCGGGCGTGTTGCACCTTTCTCGGAAGGCAATGGGGGCTGCCAGAGCATGTTATGTGACAGGCTAACAACTCAAGTTCGGGATTCGGATTGTGCTCTCTCTCTTCTGTCATCTCCACTGTCGCATACATCTGGGATTGGGTTGAGTAACATGGTGCAGCCTCAGTCATTCCCCTTGGTGCAATCCTTGGGTCCGAGCCTACAAGACCACATTATAGAGCCTATGGGTTCGGTCGTTGCTAATGGCTGGGAGACTACGGTCCATGGCTCAGGAATGTTTCACATGGGTTCTGGTGGATCATCTGCAAGTGAACCCCCTGAAAATCTTGGCTTTCATTGGCAGTAGGAAATTTGAAAGTCGCCGTAACAATAAATTGCCAAAGCTATAATATTGGTACATTCGAATTTAAACTCACGAGTTTCGGGGTTTTTTTCAGGTGTGTTTTAATTTGGAGATGTTAATCTATTGAATGTTACTCTTAAAAGTAGATGCGAGTATTACTTTGATTAAACTTTGGGTCCCAATAATAGACATTTAGTTGGAATGATACATGCAATCATTTTAGTAGTGGAGAGAATCATGTTTGGATTTAAAAAAAAAAAAAAAAAA



gi|164247447|gb|ES839273.1|ES839273 UFL_052_45 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
|||||||||||.| ||| |
TCTGTCTTCTCTTAGTCGGG

EST sequence (targeted fragment marked with yellow):
AAAAGGGAAAAACAAGGATAATCCATATTTAATGACTTTTCCATAATTAGTGACTACAAAATATGCTACTCAAAACAATAACATTTGAACATGCTAATCAAAATTCTGGACCGCTAGACACAACATAAAAAACCTCTTGATAACTTAAGCCACGAGTTGCATGCATAAGATTTTGGTGGACAAAAATACCAAGCCGAGGAACAGCAGAACCAATTTCACTCTTCCATGGGCTGATTCTCTTCTGTCTGTGCTTGGGACACATTGACTTTGATTTTTGGAAGACAAAGAGATGAATCTTGTGCAAGTGCGAGCGGAGCTTTGACCAAGTGAATGCCCTGCTCCAATTGCTTCCTTGCTTCTTTCTGCCTCTGGACTTTGCCTGTCTTAAGCCTGTTTTTGATGTGGTCAGATGCCCTGTCTGATCTGATTTTATCAATCTTTTTAATGGCCTTCAGAGTATTCTCTGCAAGGTTTCTATCATATCTCTCCGGCCTATTACGTTTTCTCTCAAACTCAAATGTTGAATCCTGTGTCATGTCCTTTCCATGCAAACGCCTATAGGCCTTGGTCCATTTTACTTTACGGGGATTCCTCTTCATCTTGAAGTTCTTGTGGCATTTCGATCTACAGAAACGGAAAATCTTGGCATCGTTGCGAACAAATTGAATACCATGCCCCGGGTATACAGTGGAGGAACAAAACCAGCACTTCTCTAATCTCATTCTTCTTAAATTAACTAACAAAACACAATTTCTTCACTCGATTTCCTGGTCGCGTCAAGAGAGGGCTTGAACCAGGGACTGAAGAAGGAGGCCGCGGCGGCCTCCTGCCGAATTCGGAACAACCAAATACATCATGGTGTCAGTCAAAAAGCACTTGAAGTAAGAAAAGATCCTGCCACTTTACCAAAGGAACAAACCATCAGGTAGGAAACAAGGAAGAAGTTTCACCCTAAAAAACCCTGGCTGGTGTTCTGCCTTAAAGGTTAAAGAAAAAAACCTCCCATTTTTCTTTACTTTTAGCCCCAAAATTTTGAAAATGAAAGCCAAAGGAA



gi|78351702|gb|DT571976.1|DT571976 EST1082616 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
TCTGAAGCTATCCCAGATGATATAAGCAATAAGAAAGAAGTTTCTGGGATTGAGACAACCAGTACTTCCTTGACACTCGTGGCTTCTGTTGGCTCTGGTGAGCCATTACTCAGTTTAAAGCTTGGCAAACAAACATACTTTGAAGATGTTAGTACGGGAACCAATGCTACGGATTCATCTTATTCTGCCACTCTGGGAACATCATCTCCTTTATCTGCAAAGAGATCCAAACTGAATTGTCGAAGCACACATGCTGTACGTTGCCAAGTCGAAGGTTGTAACCTTGACCTTTCTTCTGCTCGAGATTACCATCGGAAACACAAAGTTTGTGAAAATCATTCAAAGAGTCCGAAGGTCATTGTAAGCGGTCTGGAACGCCGGTTCTGCCAGCAATGTAGCAGGTTCCATGCGCTGTCGGAATTTGATGAAAACAAACGAAGTTGTCGTCGGCGACTTTCCGACCACAATGCGAGACGCCGCAAACCGCAAACTGAAGCTACCCACTTCAATGCTGCAAGGATTCCATCGTTGTCATCCTCGTCATATGATGGGAAGCAACGTACGAGTTTTGTCTGGAATGAAGTCCCAATTCTTCATAATGCTAGACCCAACAAGAAATTTGCATTGGAAGGCACGTTCTACTCCAAGTCCTCTCAAATGACAAGTTATACGCCTACGAAACTTGGAAACATCAATGAACAGGTGCAACTTCCAATCAATCAGCTGTCAAATCCCATCACGATGCGATGTCATGATTTCAACAAATTCCTACCCTCTAAGGGTAAGCAAAACACGGCTGAGGTTCTTGATGGAGGTGTAGAACAATCTATGGTTGCTTCAAACACCGGCAGAGCTCAAGAACTTCAACGTGCTCTCTCTCTTCTGTCAAATGATTCC



gi|164366954|gb|ES827218.1|ES827218 UFL_327_77 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||. |
ACTGTCTTCTCTCTCTTATA

EST sequence (targeted fragment marked with yellow):
GGCACGAGGCCGATGTCTGGCCTTCCATGTCAGCATTCGATGGTTACTTGTCGGCCCTTTCGCCTTTGCAGCTTGTCCGCAGCAACAGCCGCCGATTTATGCCATCACAAGCTGATGAAGAGGCCCACCAGCTGTCCTATCTACAAAAGCACTTGGCTAATATTCTCTCTCTTCTGTCAGAGCATATGGGGGGGGAAAGTGAAGAGTCTCTGGTTTTAACCATGGAAGGGTTTGAGCACCTTGGTTTCCTGATTCAATTTGGTGATAAGGGATCAGGAGGAGTTCCTTTAAGCCAAGCTGCTCCATTTTTTGCTAATTCAGATCCAGACATGCCTGCTGCACCTGTTCCAGTATCACAAGTTCATGATTGGCTTCTGCAGACTATAGCTTCTTCTTTGGAGTCTATTACTGAAAAAGTTTCTGCAAAAGAAAACGGTTCTCCTAGTGGCTCTGACCAGGATATTGCTATGGCTGATGCTAGTCCAAGTTCTGCCAAAGCCTCACCTAGTGCGAGGAGTCCGTGTTTTGTTGAGGGAGTCTCTAAATCATCTTATGTAAAGCAGGCATCTGATCTTAAAAGTTCTTCCATAAAGGTTATTAATTGCCATGATTCAACTATTTACATTTTAGCACCTTTGAGATATGCCATTATTTATGGATGCTCAGATGCTACTATAGTTCTTGGAGCTGTTGGCAAGGCTGTAAGAGTTGAACACTGTGAACGTGTTCATGTGATTATAGCAGCGAAACGAGTCTGCATTGCCAATTGTCGTGAGTGTGTATTCTTTTTGGGAGTGAACCAACTTCCCCTTTTTGGTGGCGATAACCACAAAATACAGGGGGGCACCATATAATACGTACTATTTCCAGTTGGAAGAACACTTGACTGAATTTGGCATTGTGTCAACTATCAATAAAATGGGATAAACTTTTGCCATTAGTGGGAATTGTTCAAACCGAATTAATTATCTCACCCTGGCAGGGGGTTTCTAAGGCTCATCCGGAATCCGCTACATGGCCTAAAATCCGGATAAGTTTAACGAAATTTCCGGAATTCCAAACTGGGTTTTGAAAAAGAAAATTTACCTGGGATTCAAAAAAGGGAAAAAACCGGGGTTCCCCTTTTACCTGGATAGCGAAAAAGTGAACATCCTTCAAACAAAAAAAAACTCAAAAAAAAATTTAAATGTGAGAAAAAAACCAAAAGTGGTTAAAGAAAAAACTCCCCCCTTTGTGAAAAAAAAATGTGGAAAAAAAAGAAAAAAATCCCCCGGGGGTCTTCTTCTGGGGTGTTTCTCTTTAAAAAAA



gi|164273653|gb|ES844024.1|ES844024 UFL_106_34 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||| |
ACTGTCTTCTCTCTCTCTCG

EST sequence (targeted fragment marked with yellow):
GGCACGAGGGAAAAAGGTGTTCCTTGCATACTTGTTAGCGAAAAGAAGAATTATCCTTGGTTACATGCCCGACTGTTTCTCGTTCTTGTTGGGTTTGATTTTCCTTTGTGGTAGGTCTATGTCGGATTTGATTTCCTTTGTGGTAGCATCTATCCAGATTTCATCAGCTTCCCGAATTTGACCAAAGGAAACGGAGTTGCCGTAGACGGTTAGCAGGTCACAATGAGCGACGGAGGAAACCACCACCGGGATCATTATTATCCTCTCGTTATAGCCGGCTTTCTTCGTCTATTATCGAAAGCAGCAGAGGTGGAAGCTTTATCATGGATTTCACATCCCATCCAAGGCTTTCCAGAAGGGATGTGTGGCCAACATCAACATCATCGGAACATGTACCAGGAAATCAATACACTGGAACAGGATGGTTGCATCCACATCCATGGCAAAACAACTCAGAGAATCCTCCACCTAACCTTTACAGGCAGGAATTACCAGGGGGAACTGCTGTTCCTAGTGGCGGGATTCCTCCGGAAGAATGCTTCACGGGAGTTGTTGACTCAAACTGTGCTCTCTCTCTCTTCTGTCAAATCAACCATGGGGCTCCAGAAATCAGGGATTGACTCTTGGGTTAAATGACATGATCAACTCCGAACTTTGTTCAATGTCTCAACCAGCAATGCCTCATGGTGCAGTTACGAATCCTTACTCAAATGCCTCTTGGGGGTTTCAAGGGCAACCATTCCTGTTATCCCCTCCCGGAAGATGCTGGCCTCCAATCCCCAAAACCCCAATTACCAGGTCAATTTTGCCCCGGG



gi|78337780|gb|DT558054.1|DT558054 EST1068694 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
TTTAGTACGGGAACCAATGCTACGGATTCATCTTATTCTGCCACTCTGAGCACATCATCTCCTTTATCTGCAAAGAGATCCAAACTGAATTGTCGAAGCACACATGTTGTGCGTTGCCAAGTCGAAGGTTGTAACCTTGACCTTTCTTCTGCTCGAGATTATCATCGGAAACACAAAGTTTGTGAAAGCCATTCAAAGAGTCCGAAGGTCATTGTAAGCGGTCTGGAACGCCGGTTCTGCCAGCAATGTAGCAGGTTCCATGCGCTGTCGGAATTTGATGTAAACAAACGAAGCTGTCGTCGGCGACTTTCCGACCACAATGCAAGACGCCGCAAACCACAAACTGAAGCTACCCACTTCAATGCTGCAAGGATTTCATCATCATATGATGGGAAGCAACATACGAGTTTTGTCTGGAATGAAGTCCCAATTCTTCATAATGTTAGACCCAAGAAGAAATTTGCGATGGAAGGCACGTTCTACTCCAAGTCCTCTCGAATGACAAGTTATATGCCTATGAAACTTGGAAACATCAATGAACAGGTGCAACTTCCAATCAATCAGCTGTCAAATCCCGTCATGATGCGATGTAATGATTTCAACAAATTCCTACCCTCTAAGGGTAAGCAAAACACGGCTGAGGTTCTCGATGGAGGTGTAGAACAATCTATGGTTGCTTCAAGCACCGGCACAGCTCAAGAACTTCACCGTGCTCTCTCTCTTCTGTCAAATGATCCCCAGGTTTCAAGTGAACCAAAACACGGTTCACTTACCTACCCCATTATGCATGTCG



gi|164261217|gb|ES804389.1|ES804389 UFL_497_94 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||.|||||||||| |||
TCTGTTTTCTCTCACTGGTG

EST sequence (targeted fragment marked with yellow):
GGCACGAGCTTTAGCTATCTCTTGCCGTTTCATTTCCATTCCATCAAATCCTTTCAATCAGGATTTCGTGGCCATCTTTCTCCTGAGTCCAGATCTTCTCTCGTCTCTTCCACCAGGTAACTCCCTTCCCCTTTTCTTAGTGCCTCTTTCGTCAGGTCATGCGCCTTACCATTCTCTGTTCTTTGTATGAATCAGAAAAACAATGTTTTGGAATCGATTTTTGTTGTTCTGAATATCAATCATGATCGCACTTAGAACCGATTTATCTCTGACCCCTACTTTGCACTTGTTGATTATTGTTTTCGAATCCCCCATTACCGTGACTGAGTTAAAGCCCAATCTAATGCCTAATCTGGTTGCTTCTAAACATGCCAATGTTTCTGCTACAAACGGAGAGGAAACGTTGGAGTGAAGAGTGGATTTAGAGACTACGATTTCCCCATTTTGACCCCTGGCTACCATTCCTGATGCTAATCTGGAGTTGTTGGTGTCGAAAGCTGCGTCAAACTGTATGGACCTCCCTAGTACCTCTTCTCTGTGTTCGGATCTACCAGTCGTTGTGCATCTGATTGCTCGAGCTCCAGATAACCCATAAGGTGCAACAAAAAATACGGATCTGCTCCTTTGTTCCTCTACTGAATACCCAAGACATTGTCTGAACACATGAAAGCTGTCTTCTTCTTCAGAACAACCACGTGGACACCTTGCAGTAGTGGTCACTCTCTTTTGTCTGAGGTTAGCAAGTGAAGGGATGGTAGTTCAAGATATTCGCCATACGAGAATTAGGATTTTTGTTGGTACTGTAAACTCCAAATTTCCTGTAGAAATCTTTGGTATCGGGCTGGTATAAATAATTACTAAGATCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



gi|72280822|gb|DT052672.1|DT052672 COT_FF_C09 Fiber and Ovule of Xu-142 Lambda Zap Express Library Gossypium hirsutum cDNA 3' si

TGACAGAAGAGAGTGAGCAC
|||||||||||.| ||| |
TCTGTCTTCTCTTAGTCGGG

EST sequence (targeted fragment marked with yellow):
AAAAGGGAAAAACAAGATACAATCCGTTTATAATGACTTTTCCATAATTAGTTACTACAAAATATGCTACTCAAAACAATAACAATCCGTTTATAATGACTTTTCCATAATTAGTACTACAAAATATGCTACTCAAAACAATAACATTCGAACATGCTAATCAAAATTCTGGACCGCTAGACACAACATAAAAAACCTCTTGATAACTTAAGCCACGAGTTGCATGCATAAGATTTGCTGGACAAAAATACCAAGCCGAGGAACAGCAGAACCAATTTCACTCTTCCATGGGCTGATTCTCTTCTGTCTGTGCTTGGGATACATTGACTTTGATTTTTGGGAAGACGAAGTGATGAATCTTGTGCAAGTGCGAGCGGAGCTTTGACCAAGTGAATGCCCTGCTCCAATTGCTTCCTTGCTTCTTTCTGCCTCTGGACTTTGCCTGTCTTAAGCCTGTTTTGATGTGGTCAGATGCCCTGTCTGATCTGATTTTATCAATCTTTTTAATAGCCTTCAGAGTATTCTCTGCAAGGTTTCTATCATATCTCTC



gi|78343657|gb|DT563931.1|DT563931 EST1074571 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||| ||||||||| ||||||
ACTATCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
CGAAAAATAAAGAAAAAAGACCCCATGAACGGGCTGTAGGCAGGCAGAGCTCATGGAAATGGGTTCGGGCTCTTTGACAGACTCAGGTGGTTCTTCCTCCAACTCCTCCACTGAGTCACTCAACGGCTTGAAATTTGGTCAAAAAATCTATTTTGAGGATACATCAGCTGCTGGCACCGGTGGTGGTACGACCATGGGGACTCCACTCAAGTCAGGTATCGGGTCTTCAAGCTCATCCGGGTCGGGTAAGAAGGCCAGGGGTGGAGTGGTGCAAGGTGGTCAGCCTCCAAGATGTCAAGTAGAAGGGTGTAAAGTGGATCTGACTGATGCAAAAGCTTACTATTCAAGGCATAAGGTTTGTGGTATGCACTCTAAGGCAGCTAAAGTCATTGTTGCTGGTCTTGAGCAAAGATTTTGCCAGCAATGTAGCAGATTTCATCAGCTTCCTGAATTTGACCAAAGGAAACGGAGTTGCCGTAGACGGTTAGCAGGTCACAATGAGCGACGGAGGAAACCACCACCGGGATCATTATTATCCTCTCGTTATATCCGGCTTTCTTCGTCTATTATCGAAAGCAGCAGAGGTGGAAGCTTTATCATGGATTTCACAGCCTATCCAAGGCTTTCCAGAAGGGATGTGTGGCTAACATCAAGATCATCGGAACATGTACCGGGAAATCAATACACTGGAACAGGATGGTTGCTTCCACATCCATGTCAAAACAACTCAGAGAATCCTCCACCTAACCTTTACAGGCAGGAATTACCAGGGGGAACTGGTGTTCCTAGTGGCCGGATTCCTCCGGGAGAATGCTTCACGGGGAGTTGTTGACTCAAACTGTGCTCTCTCTCTTCTATCAAATCAACCATGGGGCTTCAGAAA



gi|164246395|gb|ES843732.1|ES843732 UFL_103_14 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||.|. . ||
ACTGTCTTCTCTTATATTTG

EST sequence (targeted fragment marked with yellow):
GCAATGGCGGCTCCTCTCTTTCCCGCCATTTTCACTGGTTTCTTCTTCTTCGTCTTCCTCATCTCTCTCACGTCGCAAGATCAACTAAATAACAACGACCACAACCTCTTGATCCGTGAATTGGATGACGCCAAGCTAAAGCTCTCTCGTTTGGAATCTGTTCTCGAAGAAACAATTCAAAGCATTGATGCTAAAACCCTTCTTCTCAAGGAACGCGAGAAGCTTCTCGAAGACATGGAAAACAAGATCACTTATCTGCAGTCTGTTATATCCACTCTTGAGGATGATTCATTACTTGCTGATGAAAAGCTTAAGGCTCTAGAAGAGGAGGTACGTTTGCTTTGGGATGCTTCGAGAAAGAACAACTTTGAACTTCATGTTTTGGAATCAGAAGCACAGGACACTGAAGATAGGGTGGAAGCTGTTAATTTAAAAGTTGAAAAGATGGCAGAAGTTGTTACAGAACAATGGATTCAAATTCAACATCTTGAGCAGGCGCTTCAACTTGCACAAAGGAGGGCATTGCAAGATCAAAAGCAAAGGTACATGAGATGCTCATTCTTGAGGTTGCAAGGTTTCATCAAACAAGAAATGCGAAGAAATGAATTTACTGCAGCCTTTGTCAATGATGAATTTGTATTCTTTCTGGCTTCGGCATTGATTACCTTCCCTGTACTGGGTGCTTGGATGGTGCTGTCATCACAGTTCAGCTAGGTCAAGAAATCTCTTCCATTGGAGTTTATATTCTCTTCTGTCATCTAGAATATAAAATCTGAATCCGCACACCTTAAAGGGGAAAGATGAGTTGGGGAACGCACACACCAACACACAGGGAAAATCTGGCGAATAATCCTCACCTCCCAAATAACCAACGACACCAAGTTTATTTCCAGTGTCCCAAATTAAAAACAATAATGATATGGTAATTTTTGAAATTTTGCGGCCCTGGAGAAGTTTTTCCCGGTTCCAAA



gi|73861547|gb|DT464286.1|DT464286 GH_CHX15G02.f GH_CHX Gossypium hirsutum cDNA clone GH_CHX15G02 5', mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
GCGGCCGCGTCGACTGATAAACCAGTGATGGAACTGATGTTACGAGCTTACAGGTTTTTTGTCAAATTTTGCAGGTGTAGAACAATCTATGGTTGCTTCAAACACCGGCAGAGCTCAAGAACTTCAACGTGCTCTCTCTCTTCTGTCAAATGATTCCCAGATTTCAAGTGAACCGAAACACGGTTCACTTACCTACCCCATTATGCATGTCAACCTTACCAGTACATCTCAGCCAGCAATGAATGCAATCCCACAAGGTTTTCAACATGCCTTGCCAGAAAACTGGCAGATCGAACAACAAGAAGAAACAACCACCAAGTCCCGCATGCATACTAGCGACGTCGACGACCGTTTTCGGGAGTTCCTATTGCTTAAGGCTCCATATGATGTTGGCTTTTACTCATGAATCGGACAATGTCTCTTAACACCATGTATCGATCTATGGGTATATGCAAAAATTCAGTTAACTGAATTAATTTAACCAAAATAGATCAAACCCGAATCTGCAAAAATTCAGTTAACTGATTAAACTTGAAGTGAACTGAATTAATTTAACCAAAATAGATCAAACCTGAATCTGACTCGGCCTCGAACATCAATTTTACCAAAAAGTACATACCAACTATAGCCCCTATGCTGCTCAATGTTCTTTGCAAGTCATCACTAATGCT



gi|164345361|gb|ES831037.1|ES831037 UFL_340_18 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| |||||
ACTGTCTTCTCTCTCTCGTA

EST sequence (targeted fragment marked with yellow):
GGCACGAGGTTGAACTAATGCTGACAGGGACATAAATGGAACTTTATGCAAAACCCAGAAATGGCAACAAGCAAAGCTGAAGGGAAAAGGAGACTGAAGGAAATGGGGGAGGAGGAAGAAGAAGAAGAAGAGGACGAGGATAATAGTACTACTGGTGACGATGACAAGAAGAAAAAAGGCAAAAGAGGGTCCAGTACGGTGGTCGGAGGCTCCTGTCTTCCAGCCTGTCAGGTCGAGAACTGCACTGCCGACATGACCGATGCCAAACGGTACCATCGGCGACATAAGGTGTGTGAGTTCCATGCCAAGGCTGCTGTGGTTCGAGTTGCTGGGATCCATCAACGCTTTTGTCAACAATGTAGCAGGTTCCATGAGTTATCAGAGTTTGATGAAACAAAAAGGAGCTGTCGACGACGTTTGGCCGGACACAACGAGCGCCGTCGGAAAAGTTCATCGGAATATCATGGAGAAGGCTCAAATTTTTAAAACTAGCTAAGAAGGCAAGCCTAAGATATATATATATATGCAAAAAAGAGTCAATTCAGTCTTGAATTTAATATGATCCTATGTATGGGAATGGACTTTCCCAGATGATCATGTAACTATATGGAATTTACTAATTAAGCATGCTCTCTCTCTTCTGTCAATCTTAATTTTTCCCCCTATAATATTGTCACCTTTTTCCTGGCTTGCTCTCCNNAAANAAAAAAAAAAAAAAAAAAAAAACAATAAATAACTCCAAAAGTATTTCTTAAGCGGCCCCGCGGCCCCTCCATTTTCCCCCCGGGGGGGGGTTACCCGGTAAAGGGGCCCCCATTTCCCCCCTTAATGGAGTCCTTAATACAATTCCCCGGGCCGCTCTTTTTTAAACCTGCCGGGACTGGGAAAAAACCCCTGGGTTTCCCCCATTTAAATTTCCTTGGCCACCCTTCCCCCCTTTCCCCCCTCTGGGGGTTAAAAACCAAAAAAGGCCCGCCCCCCGTTTCCCCCCTTCCCAACAAGTTTGGCCCACCCCCGAGATGGGGCAAAGGGGGAAATCCCCTTTTTTTTAAGGGGTGAAAAAGGGGGTTTAAAACCCCCCCTGGATTTCCTCAATTTTGTTGTGTGGATTTTTTTTAAAAATTTCCCCAATCTCCACCGGGGCTCTTTTTTTCCCGGCCCCCCCCCCCGTCCCCCCCCCCCGGGCTCTTGTTTCTTTGTGAACATATAAAAATCCCCCCCCCCAATCCCCAACACTGTTTTTGTTGTAAAGAGGTTTTTTTTTCCTTTGTTCTTTTTTTTTAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCTCCCTCCCCC



gi|109875775|gb|DW504749.1|DW504749 GH_TMIRS_087_C02 Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
ACCACAACTTCTCAAGGAGAATGCTTCACGGGAGTTAGTGACTCGAGCTGTGCTCTCTCTCTTCTGTCAAATCAACCATGGGGCTCCAAAAACAGAGCTTCGGCTCTTGGTGTTAACGACATGATGAACACCGAACCAATGCCCCATGGCACATTCGTAAACCCGTTTTTGCAAACCTCGGAGCCTGCTGATGCTCAACATTTCGGCAGGCTTGAGTTGCCTCAGCAAAACAGCGTGCAACACATGGAACTTGAGCAGCACTCCAGATCATTTGACACATCGGCACAGTATGTTCACTGGTCACTCTAAGTTCGTCCCATTTCTCTTTCCCATCTTGTTGTCCTGTTTTCGTGCCAGTTCTTATGTTGTATTCGTACTTTTCCGAGCATCAGATTTTATGTTTTAACGGAATAAACCCGAACTATCCCCTGTATTTGCCATTGTTGTTGCCTGAATCATTAAGTCAGGCATTACTAGATGTTTTGGTATTTATCTATGATCAATGGCGGG



gi|84167278|gb|DR455926.1|DR455926 CM039D05 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
|||||| |||||| | ||||
ACTGTCGTCTCTCTCGCGTG

EST sequence (targeted fragment marked with yellow):
ATGTGAAGTCACTCTAAACCCAAAAGTATTATAAGGGGTCAGAACAACGGTTTTGCCAGCAATGCAGAGGTTCATTGTTTGGTGGAGTTCGATGAAGGAAAACGAAGCTGCAGGAAGCGTCTCGATGGACATAACCGAAGACGGAGAAAACCTCAACCTCAACCTCATTCTCTATCTGTAAATCCAGGAAGATGTCTTTCCAATCTCCAAGGTTCTAGACATTTACCGTCCAGTAGTCCCCAAATATTTGCCACTACTGCCATAACCTCTTCTTGGTTGGGAACTGCCAGAATGGAACCTGATATAGGCTCCGAATCCAGCCGAAATGGTTTCTTCAGTGGATCCTTTCCACACAGCTACAAAAGGGAAGAACAGTTGTCATTATTACAAACCAATCATTCATCACTCCATGGAGTAACTGTATATCAGTTACCTATATTAAGCAATGGTGTAGGCAGCAGCCGAAAAGTGTTCTCAAATGCGATCGACTCCGATCGTGCGCTCTCTCTGCTGTCATCACAGCCGGATGAGAATCCGGAGATTGGTTTGAAACCGAGGTGCAGTCTGGTCCAATTTCATCGTTGGTCCAACAATGGCGGTTACTGGTTTCCCGTATGGGGTGGCCCTGTTTGTGCCGTGTTTGCTGTGTTACCCCAATCGTGTGACAAATGTTGGCCTGAATGGGATT



gi|109879497|gb|DW508467.1|DW508467 GH_TMIRS_124_G06_R Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TGACAGAAGAGAGTGAGCAC
||||||||||||||||||||
ACTGTCTTCTCTCACTCGTG

EST sequence (targeted fragment marked with yellow):
AATGGAAAACAATATATAATTGACAAAATCATAACCAAAAATAACAATAAACATGATCACACACTTACTGTGCTTTTTATCTCTTCGTCAATAAAGAGAAAAGAACAAGAAGTCTACATATAAAATCCCATATGGGATTGTTTTCAACTCAATGATCTGTAGGAGAAGAAGGTGTAAAAAGTTTCCAGCAAATGTAGAAAGGAGAGGAAAAACAAGTGAAAAGAGTGAATTGTTAAGCTGACAGAAGAGAAGTGAGCACACGGCGGGCAAAGGTATGGCCTTTCATACAATCTGCCTGCGTGTGCTCACTCTCTTCTGTCAAACCTCTCCTTCCTCTCTAAATTACTCACTTTTTTTCCCCGATCTTTACCATTATTAGCTTTAAAACAAACTGCCTGCTATACTGCTGCTGCTTTAAATGAGATGATAGAGATCACACCTTCCTTTGAGAGACTCAACAAACAGATCTGAGAGATCATGCTTCAAATACGAAAGTCTGAATGAGAGAGAGTAGGTCAAAAGCTTTAGGGTTTTCTCTGCAATTATTCACCCAAACCCAAAGACCCCAAAAAGCATTCGCATTGTATTTCCTTCGATAACCATCCCT



gi|109859024|gb|DW488003.1|DW488003 GH_RMIRS_067_A06_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TGACAGAAGAGAGTGAGCAC
||||.|||||||||| |||
TCTGTTTTCTCTCACTGGTG

EST sequence (targeted fragment marked with yellow):
GTTTTCATTTCCATTCCATCAAATCCTTTCAATCAGGATTTCGTGGCCATCTTTCTCCTGAGTCCAGATCTTCTCTCGTCTCTTCCACCAGGTAACTCCCTTCCCCTTTTCTTAGTGCCTCTCTCGTCAGGTCATGCGCCTTACCATTCTCTGTTCTTTGTATGAATCGAAAAACAATGTTTTGGAATCGATTTTTGTTGTTCTGAATATCAATCATGATCGCACTTAGAACCGATTTATCTCTGACCCCTACTTTGCACTTGTTGATTATTGTTTTCGAATCCCCCATTACCGTGACTGAGTTAAAGCCCAATCTAATGCCTAATCTGGTTGTTTCTAAACATGCCAATGTTTCTGCTACAAACGGAGAGGAAATGTTGGAGTGAAGAGTGGATTTAGAGACTACGATTTCCCCATTTTGACCCCTGGCTACCATTCCTGATGCTAATCTGGAGTTGTTGGTGTCGAAAGCTGCGTCAAACTGTATGGACCTCCCTAGTACCTCTTCTCTGTGTTCGGATCTACCAGTCGTTGTGGTAATTTTTCTTTCTCGCACAACTTCAAGCTCTCCTAAGTAACTCTGTACTTTAATAGTTAGATCCCTTCCTGATGAACTCTTCCTTTTCATGGAGCATCTGATTGCTCGAGCTCCAGATAACCCATAAGGTGCAACAAAAAATACGGATCTGCTCCTTTGTTCCTCTACTGAATACCCAAGACATTGTCTGAACACATGAAAGCTGTCTTCTTCTTCAGAACAACCACGTGGACACCTTGCAGTAGTGGTCACTCTCTTTTGTCTGAAGTTAGGCAGTGAAGGGATGTAGTTCCAAGATATTCGCCATACGAGAATT



gi|164336398|gb|ES799886.1|ES799886 UFL_479_26 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
TGGAGTTACGCGCGCCTGCACGTCGACACTTATGTGGATCCANAAGAATTNCGGCACGAAGCGAACCACAAGCTCACATTCTCAAATTCCTTGCTGTCAAGTTTATGGTTGCAACAAGGACCTTAGCTCTTCAAAAGATTACCACAAGAGGCACAAAGTTTGTGAGGCTCACTCTAAGACTGCCAAAGTAATTGTCAATGGAATTGAACAGCGGTTTTGTCAGCAGTGCAGCAGGTTTCATTTACTAGCGGAATTTGATGAGGGTAAGCGCAGTTGTCGTAAACGCCTATTAGGGCATAATGAGCGCAGAAGGAAGATTCATTTCAATACCTTTTCCGGAAAATCACATAAGTTGCTTCATTCATATCAAGGTACCAAGTTTCTGGGAACCTCCATACCGAAACAAACGCCTTTTGTTGTCCCTAACATATTTCAAGTTGACTTTCTTCATCCAGAAAGACATGCATACAGTAATCAATATCAGCAGGTTAAATCTGAAGAGAAACCAATGTATAGTTCTCAATCAGCAACGCCAATCACAAACGGGCAGTCGTCTTTCTTTCATATGCATGGCAGTGGGAAGCACATCTTTCTGGAACATTATCATCAGCAACTGAAGCCTTCAATGCTTCTAGTGCAGCACCAACAGTTAAAGAGTTATCTGGGGTTTCACGCTCAGACTGTGCTCTCTCTCTTCTGTCAGTTCAATCCTTGGATTTGTCAAGCCATGTGACAGGTATTCANATGACTAGGCCCTTGATCAATCAGCTGGCCATGCCATCGTAGCATGAGACATCTGCACGATGATTTATCGGAAAAAGCAGCATTTCTATTCAT



gi|164272834|gb|ES839900.1|ES839900 UFL_059_30 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
GGCACGAGGGAAACTTCCGTTGTAACTTCGATTCAACCGGTTTTGATATCGAAGAAAGCTTCGATAACAACAAGTTCATGTCCTCAAACACCTCAATGTCAAGTTTATGGTTGTAATAAGGATCTTAGTTCATCAAAAGATTATTACAAGAGGAACAAAGTTTGTGAGATTCATTCTAAGACAGCCAAAGTTATTGTTAATGGAAATGAAATGAGATTTTGTCAACAATGTAGCAGGTTCCATTTATTGGCTGAATTCGATGATGGTAAGCGTAGTTGTCGTAAACGACTAGTAGGACATAATGAGCGTAGAAGGAAGCTTCATTTCAGTACCCTTCCCGGAAAATCACATAAGTTGTTGCAGTCATATCGAGAGAGATATGAACATGCTGATCAGGTTAAATTCAGAGAGAAACCGGTTTATGATCCTCAGTCGGCAATATCGATCATAAATGGCAAATTGGTGTCAAAGAAACAACACATCCCCGGAAGTTTTTCGTCGGCAACTGAAGCCTTCCATGCTCCTAATGAGTTATCTGGTCTTTCTTGCTCGGATTGTGCTCTCTCTCTTCTGTCAGCTCAATCACGAGACTTATCGAGCCATGCGACCGGATTTCAATTGACCGAGCCTTTTATCAATCAACCTAGCCACCACCATGGGAATTTGTTTGGAAAATGCCAATGGTTTTTACTCATGTGGGATGAACCCCATGGGAAGTAACCCAAGCAAGATCCCTTTCGAAACCCGGGTTCTTTCAAGTCCCAAATGGAACCACTGGTGAATTTACTTCAACTAATCAACACTTCTCCAAAAAATGGAAACAACAAAGGAAGTTCAATGCACCTAAAGGCCTGAAAACAAAAACCTTTTTAATTTCCTTAAAACTTAATCCAAAAAAAAAAGGGAAAAGGTTTGTTCCGTTGTTTTTTCCAGGGTTCAGAAAATGTTAACCCGAAATCGGGTTTTCCGAAAAATTTTCTAAATATTTTGAATTTTCCTTGGAAGAATCTATATTTTTCCCAATGGTCGGGAAAATGGGTCAAAAAACGGGGGTTTGGAAACCCAAAAACTTTCTCGGGTTTTTAAAAGATCCCCTAACCACTTTTTGGGGGGCATTAAAGGGGGCAAATTTGAAAAAAAGAACAAAAATAAAAATTCCTAAAATTTAAAAAATAAAACCCCTTGTGAAAAAAAAGTTTAAAAAAAAGGGAATACTTGGAACAACCTTAAAATTGTTTTTTTTTTTTTTTTTATTATTAAAAAAAAAAAAAAAAAAAAAAAACCCAAAAAAAGAATTTTTTGAGGAGGGGGCCGCCCGGGCCCCCCCGGAAATTTTTTTCCCCCCCGGGGGGGGGGGGAGCCCAGAACAGAAGAAGGATGACCCGCCACCACTTCGCCCC



gi|78335606|gb|DT555880.1|DT555880 EST1066520 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
|.||||||||| ||||||
ATTGTCTTCTCCCACTCGCC

EST sequence (targeted fragment marked with yellow):
CCCACCGCTCACCCTCTTCTGTTACAGAGATTCCTTCCGGGCTTCTCTTATTCATAACTCATTTCAAATGGAGAAAGCATCCTCACCAGAGGCCTCTCCCAAGCCTCACCACAAGAAAAGCTTTGTTACTACTTTAATGGAAGCTGCCACTCTCCGCTCTCCTTCTTTTAAGGAAGATACCTACTTCATCTCCCATTTGAAGTCTTCCGAGAAGAAGTCCTTGCAAGAACTCAAGGACAAGCTTACGGCTTCTCTTGGCCCCGACGGCCAATGCACCATGTGGGGCATCCCTCTTCTCTCCGGTGACGAAAAAGCCGATGTCATTTTGCTCAAGTTCTTGCGAGCTAGGGACTTCAAGGTCTCCGACTCCTTTCACATGTTGGAGAAATGTCTTGCCTGGAGAAAAGAGTTCAAGGCAGACAGTGTGGCGGAGGAGGAGTTGGGGTTGGAGGAGCTGGAGGGAGTGGTTGCTTATATGCATGGCTATGACAGAGAAGGCCACCCTGTTTGCTACAATGCCTATGGGGTTTTTAGAGACAAGGACATGTGTGAGAGAATGTTTGGGGATGAAGAGAAGCTGAGCAAGTTCCTGAGATGGAGAGTTCAAGTTATGGAGAGAGGAATCAATCTGCTGCATTTCAAGCCTGGTGGGATCAACTCTATTATTCAGGTCACCGATCTCAAAGACATGCCCAAAAGAGACCTCAGGGTCGTTTCTAATCAGATCCTCTCTCTCTTTCAAGATAATTACCCTGAAATGGTTGCTCGTAAGATTTTCATCAATGTCCCATGGTACTTCAGTGTGCTGTATTCAATGTTCAGTCCATTTCTAACTCAGCGAACTAAGAGCAAGTTCGTGATCTCCAGACAAGGATATGCAGCTGAACACTCTACAAGTTTATAAGACCCGAGGATGTTCCAGTACAA



gi|189098435|gb|FG551587.1|FG551587 rmhcya0_000476 SSH library of cotton somatic embryogenesis Gossypium hirsutum cDNA, mRNA seq

TGACAGAAGAGAGTGAGCAC
||||||||||||.|. . ||
ACTGTCTTCTCTTATATTTG

EST sequence (targeted fragment marked with yellow):
TAGCGTGGTCGCGGCCGAGGTACTGGGTGCTTGGATGGTGCTGTCATCACAGTTCAGCTAGGTCAAGAAATCTCTTCCATTGCCGTTTATATTCTCTTCTGTCATCTAGAATATAGAATCTGAT



gi|164264254|gb|ES809126.1|ES809126 UFL_187_87 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||| ||||||||| ||||||
ACTATCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
GGCACGAGCTTCACGGGAGTTGTTGACTCAAACTGTGCTCTCTCTCTTCTATCAAATCAACCATGGGGCTTCAGAAATCAGGGATTGACTCTTAGGGTTAAATGACATGATCAACTCCGAGCTTTGTTCAATGTCTCAACCAGCAATGCCTCATGGTGCAGTTACGAATCCTTACTCAAATGCCTCTTGGGGTTTCAAGGGCAACCACTCCTGTAGTCGCTCCCAGGATATGCTGCCTCAAATCCCAGAGCCTATTAACAGTCAATTGACCGGGGGACTTCAGTTGTCTCACCAAAGCAGGGGGCAATACATGGAGCATGAGCCATCTAATGCGGATGACACCTCCATGCAGCATAATCACCAATCCTTCTAAGTCTGCTGTGATAATCATTCCTGCAAATATTGGTCAGTTTTTGTGCCCAGTCTTATTTAGTGTGTGATTTATGGTGTTTCTGGCATTATCGTTTCCTTTTTGGGATGGAGTTTGTTAAAAACCCAAACTACCCCATCATGTTGTGTGTGCCTATGGTTAAAACATGATTAATAGGTGAGAAAAGTTTTAGCCTAAAAAAAAAAAAAAAAAAAAAAAAA



gi|84154707|gb|DN804062.1|DN804062 G.hir-8-10 DAA bolls drought stressed938 8-10 DAA cotton bolls from drought stressed plants G

TGACAGAAGAGAGTGAGCAC
||||||||||| .|||||
ACTGTCTTCTCGAGCTCGTT

EST sequence (targeted fragment marked with yellow):
GCACGAGGCCGAGTTTGAGAAAAACATGGAGTTTGCTCGAGCTCTTCTGTCAGGCCTTTCAACAGATTTGGATGGTCTGTCCAGTCAAATTAACCAACTTGCTGGACAAGATCAGAGAGAACCAACTGAATCCAGACATCACACTCTTAAGGAGGACCATGCTAATAGGCCTACATCTTCTGATGGAAAATCTTCAAGTAAAGATCAGTCATCAATCTCTAAAGTTCCATCCATCTCAGAATTGGAGAATAGAGGGGCGACTATACTTCTGAAGGAGGATCAAGTGAGTAAAGTGTTTCAAGAGTACCCATACATGTTTGCTCATGCTGGTGATTTGACAGTAAAAGACGTTGAAGAGCTGCTAAATAACTATAAACAACTGGTGTTCAAGTATGTTTGCCTTTTGAAAGGATCAGATGGTGCTTCTGCATCTTTTCCTTTGTCTAAGTCACAAGCTCAAGCCCAGCAACATGTTGAAACAGTCAAGGAATCTCAAGATCATAGGGCAATAGCACAA



gi|109858881|gb|DW487860.1|DW487860 GH_RMIRS_066_C03_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TGACAGAAGAGAGTGAGCAC
|.||||||||| ||||||
ATTGTCTTCTCCCACTCGCC

EST sequence (targeted fragment marked with yellow):
AGTCGCCCTCTTTCCTCTGCAAGTAAACACAGTCAATCCCAAAATCACTGCTTTTCTTCTTCCTTAATACTATTTTCATACTTCCATCTTATCAAAACCAATCCCCTCCCACCGCTCACCCTCTTCTGTTACAGAGATTCCTTCCGGGCTTCTCTTATTCATAACTCATTTCAAATGGAGAAAGCATCCTCACCAGAGGCCTCTCCCAAGCCTCACCACAAGAAAAGCTTTGTTACTACTTTAATGGAAGCTGCCACTCTCCGCTCTCCTTCTTTTAAGGAAGATACCTACTTCATCTCCCATTTGAAGTCTTCCGAGAAGAAGTCCTTGCAAGAACTCAAGGACAAGCTTACGGCTCCTCTTGGCCCCGACTGCCAATGCACCATGTGGGGCATCCCTCTTCTCTCCGGTGACGAAAAAGCCGATGTCATTTTGCTCAAGTTCTTGCGAGCTAGGGACTTCAAGGTCTCCGACTCCTTTCACATGTTGGAGAAATGTCTTGCCTGGAGAAAAGAGTTCAAGGCAGACAGTGTGGCGGAGGAGGAGTTGGGGTTGGAGGAGCTGGAGGGAGTGGTTGCTTATATGCATGGCTATGACAGAGAAGGCCACCCTGTTTGCTACAATGCCTATGGGGTTTTTAGAGACAAGGACATGTGTGAGAGAATGTTTGGGGATGAAGAGAAGCTGAGCAAGTTCCTGGGATGGAGAGTTCAAGTTATGGAGAGAGGAATCAATCTGCTGCTTGTCTCGTCCTCTGCC



gi|109870990|gb|DW499966.1|DW499966 GH_TMIRS_041_G02_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TGACAGAAGAGAGTGAGCAC
||||||||||||| |||||
ACTGTCTTCTCTCTCTCGTA

EST sequence (targeted fragment marked with yellow):
AAAACATCAGGCTATGTAAATTGTAGTGTTCATTTGTTTTGCAGGTTTCACTCACTGGAGGAGTTTGATGAAAGAAAAAGAAGTTGCAGAAAACGTCTCGAGGGACACAACCGCAGGCGAAGGAAGCCTCAGTCAATGTATCCCCTCTCTCTCATGCGTCCTGGAACCTACTTCTCTGATTACCAAGGTACTGAGTCGTTTCCTTTCGCTAGTTTGAATATACCTACTTGGCCTGGAGTTAACACGCAGGAACCCATAGTCAAGAAAGACACTCTTCAGAATCGAACCCCACCCACCTGTCAGTCGTTCAGGACCGCACCGGAAGGAAATGGGGGCAGCAGCAGTCACAATGTGTCGTGTGATAGGTTAGTATCTTGGTTTCGAGATGCAGATTATGCTCTCTCTCTTCTGTCATCTGTGCGGACACAACCTTCGTCTGGGATCGGTTCGAGTAACCTCGTACAGTCTCACTCGTTCGCCTTGGTGCATCCCTCGAGACTGAGCGTCGCGAATCCCGTTGTCGAACCGATGGGATCACTTGCTGTTGCCAATGACAGGGATGATAGGGTCCATTGTCCACAAATGGTTCACATGGATTGTGGTGAATGCTCTAAAACCCAAGACCCTCACACTCTTCCCTTTCATAGGAAATATTGAATCGAATTTAGCTTT



gi|164329140|gb|ES808939.1|ES808939 UFL_254_81 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||||
ACTGTCTTCTCTCCCTCGCA

EST sequence (targeted fragment marked with yellow):
GGCACGAGGTAAATTGCAAAGTAAATATGAATAAGGATTTCATAGCTGAAGAACTTGACAATGACATGCAAGAAGAAGAAGAAGAAGGTGTTGGGGGTGATCATGGTTTCCCAGATGATGAAAAGAAGAAGAAAGGTTATGGAAGGAGAGGAGCCGCTGGTGGCGGTGGTGGGGTGTCGCCGCCTGCTTGTCAAGTGGAAAAATGTGGGCTTGATTTATCTGATGCCAAGCGATACCACAGGCGCCATAAGGTGTGTGAGATTCATGCCAAGGCGCCATTTGTGGTTGTTGCTGGTCTCAGGCAACGCTTCTGTCAACAATGCAGCAGATTCCATGAGCTACCGGAGTTCGATGAAGCAAAACGGAGCTGTCGAAGGCGGTTGGCCGGGCATAACGAAAGGCGTCGGAAGAGCTCAGCTGAATCATCATCAGCAGCAGAAAGTTCAAATCGCAGAGGGATGATGATCAGTGCTCAACTGAAAGAGTCTCATTACCTAGCTGATGATCAAAGAGCCAGAGTCAATCCAATGGCAATCCATGGCAGTTCATCTTTTAAGCGTTCCCAAATCAGATAAGGAAGCTTAAGCGACCAAAACAATACGCTCCCTCTCTTCTGTCATCCGATGGTTCATGTCTTGTACTATTCTGTCATCCGATGGTTCATGTCTTGTACTCTGTACCACTTACTAGATTTTGATGGAGGATTTTAATAACAATGTCAGGCATCAACTCGATTATCGAGATTTCACAAAAAAAAAAAAAAAAA



gi|164285224|gb|ES850935.1|ES850935 UFL_660_43 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||||||
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
GGCACGAGGAAGGAGGTGGACCTTCTTCGTCGACGGGACCGAGGTGTCAAGTTGAAGGGTGTAATGTTACACTAGTCAACGCTAAAGACTATCACCGGAGACATAAAGTTTGTGAAACACACTCTAAAGCACCCAAGGTGGTGGTGTTAGGGTTAGAGCAACGCTTTTGTCAACAGTGTAGCAGGTTTCATTTAGTGTCAGAATTTGACGACTCTAAGAGGAGTTGCAGAAGGAGATTAGCAGGTCATAATGAGCGTAGAAGAAAAACCTCTCAAGATTCTGCTACCAGGAACTTTGCTCATGATAATAAACCGATGACTGGGAGTTTTCCGTATGTATCGTCGCCAACAGGACGTGCTCTCTCTCTTCTGTCATCCAAGGTTGATTCTTGGATCTCCCCGTCTAATCTCTCCACAAGATCTAGTGCCGCCTTGCGTGAGCTGATTGTGGAAAACCGTGCTGCTGTCCTCGCACGGCAGCTCGTACTCGAGCGTGACTGGCACTATATAGGTGAGCCCCAGCCTGCAGGGTCCAATCCTATATTAGTTCAGCATCACTCAATGCTTGACCCTCATCGTTGGGACTTTCCGTTCCCGGAAATCGGTGGTCAAGTCACATTAGATCTCATGCAAGCATCGAACACGGCGTTTGGAATGTTGTCGGTGAGGGGAAAAACTAAGGAAGAGGAAGAAGAGTGTTCGGAGTTGTGGCATTCCCCTGCAAGAACACATGGGATAGTTCCCCACTATTTATTCCTCATTTTCATTATTGAATTTGTTGGGCACCTGGTATAATTTAATCCCTTTCCATAATTTTGGAATTTGGAAAA



gi|78349892|gb|DT570166.1|DT570166 EST1080806 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||||||||||||| ||. |
ACTGTCTTCTCTCTCTTATA

EST sequence (targeted fragment marked with yellow):
CGACCCCATAGAACCATCAACGTCATCGAGCGACCCGAATTCGATTCCAATACCGACCGCTATCTTACACCCGCGACGCGAGCCTTTCGAGCACGGTCTCCTAACAATCCAGAAGCTCATATTCAACGACCCCGTCCAAGCACTAACCCCTCTAAAGCAAAAATTCGCATCCCCCTCAACTCAACGAGTCGACTCGGCGGCCCTCGCTGAATTGCTACAGATCTCATTCGACCATTCGCGTCTCGTCCTTGAAACTCTCGCTTCTGTCCTCCACTCGGAACCCGACCCGCTCGTAACCGCCCTGCCGGATGATGTCGACTCCATTGGTGCCGATTTGCGTGATCTGATCCTGTTTTTGTATATTCAATCGTATAAGAGGCTTTTGCCGCGCTCGCACAAGGACTCCGCTGCGGTTGCCGATGTCTGGCCTTCCATGTCAGCATTCGATGGTTACTTGTCGGCCCTTTCGCCTTTGCAGCTTGTCCGCAGCAACAGCCGCCGATTTATGCCATCACAGGCTGATGAAGAGGTCCACCAGCTATCCTATCTACAAAAGCACTTGGCTAATATTCTCTCTCTTCTGTCAGAGCATGTGGAGGGGGAAAGTGAAGAGTCTCTGGTTTTAACTATGGAAGGGTTTGAGCACCTTGGTTTCCTGATTCAGTTTGGTGATAAGGGATCAGAAGTAGTTCCTTTAAGCCAAGCTGCTCCATTTTTTGCTAATTCAGATCCAGACATGCCTGCTGCACCTGTTCCAGTATCACAAGTTCATGATTGGCTTCTGCAGACTATAGCTTCTTCTTTGGAGTCTATTACTGAAAAGTTCTGCAAAGAAACGGTTCTCCTAGTGGCTCTGACCAGGATGTTGCTATGGCTGATGCTACTCCAGTCTGCCAAGCTCACTAGTGCG



gi|109852935|gb|DW481914.1|DW481914 GH_RMIRS_033_E06_040_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA

TGACAGAAGAGAGTGAGCAC
||||||||||||| |||||
ACTGTCTTCTCTCTCTCGTA

EST sequence (targeted fragment marked with yellow):
CCTCTTCTTTTTCTCCCTTTTTTTAACCTTATTATCTCTCAAAGAGACTATTTTTTTTATTCTTCTTCTTCATAGAAAACCTCTTCATCTCATTCATCTCCTCTTTTCTTTTGTGATTTTTTAAGCAAAACCCAGAAATGGCAACAAGCAAAGCTGAAGGGAAAAGGAGACCGAAGGAAATGGGGGAGGAGGAAGAAGAAGAAGAAGAGGACGAGGATAATAGTACTACTGGTGACGATGACAAGAAGAAAAAAGGCAAAAGAGGGTCCAGTACGGTGGTCGGAGGCTCCTGTCTTCCAGCCTGTCAGGTCGAGAACTGCACTGCCGACATGACCGATGCCAAACGGTACCATCGGCGACATAAGGTGTGTGAGTTCCATGCCAAGGCTGCTGTGGTTCGAGTTGCTGGGATCCATCAACGCTTTTGTCAACAATGTAGCAGGTTCCATGAGTTATCAGAGTTTGATGAAACAAAAAGGAGCTGTCGACGACGTTTGGCCGGACACAACGAGCGCCGTCGGAAAAGTTCATCGGAATATCATGGAGAAGGCTCAAATTTTTAAAACTAGCTAAGAAGGCAAGCCTAAGATATATATATATATATGCAAAAAAGAGTCAATTCAGTCTTGAATTTAATATGATCCTATGTATGGGAACGGACTTTCCCAGATGATCATGTAACTATATGGAATTTACTAATTAAGCATGCTCTCTCTCTTCTGTCAATCTTAATTTTACCCCTATTTGTCTCGTCCTCTGCCTGATG



gi|109882522|gb|DW511492.1|DW511492 GH_TMIRS_153_G12_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TGACAGAAGAGAGTGAGCAC
.||||.||||||| ||||||
GCTGTTTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
AGATCATGTTGGGCATCGGAGAGATCTAGAGAAGATGGATTATCCAATTAATAGGCACCCTTTATTTCGCTATAAAACAGAGTTTCAGAGCCATGAACCTGAGTTTGACTATCTCAAGAGCTTGGAAATTGAGGAGAAAATTAACAAAATTAGGTGGTGCCAGTCGGCTTATGGTGCTCTCTCTCTTTTGTCGACAAATGACAAAACAATCAAGTTCTGGAAGGTACAAGAGAAGCAGGTAAAAAAAGTATGTGACTTGAATGTGGATTCCACCAAAGCCATGGGAAATGATCCTATTGTTGGTTCAAGTATATCAACAAGCTCCAAACAATACATGGCAAATGGAGGATGCACAAGCAATGACTTTTCATTGCTAAGTGGGGGTTTGCCATCTTTGCGTTTGCCTATGGTAGTTGTTGTCTATCATGAATACTTAAGAAATTATTATGTTATTTTGTCATTTTTTAATGTTTAGGCAGTGTCTGATACGCCAAATTGTTGTTTATATGGTTTGTTGATCTGACACGTAGTGCTTATGTTGTAATTAGGTAACTACTCTTGAGACAAACCTTATGGCCAGATGTCGAAGAATATATTCTCATGCGCATG



gi|78348956|gb|DT569230.1|DT569230 EST1079870 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||| ||||||||| ||||||
ACTATCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
GAAAAATAAAGAAAAAAGACCCCATGAACGGGCTGTAGGCAGGCAGAGCTCATGGAAATGGGTTCGGGCTCTTTGACAGACTCAGGTGGTTCTTCCTCCAACTCCTCCACTGAGTCACTCAACGGCTTGAAATTTGGTCAAAAAATCTATTTTGAGGATACATCAGCTGCTGGCACCGGTGGTGGTACGACCATGGGGACTCCACTCAAGTCAGGTATCGGGTCTTCAAGCTCATCCGGGTCGGGTAAGAAGGCCAGGGGTGGAGTGGTGCAAGGTGGTCAGCCTCCAAGATGTCAAGTAGAAGGGTGTAAAGTGGATCTGACTGATGCAAAAGCTTACTATTCAAGGCATAAGGTTTGTGGTATGCACTCTAAGGCAGCTAAAGTCATTGTTGCTGGTCTTGAGCAAAGATTTTGCCAGCAATGTAGCAGATTTCATCAGCTTCCTGAATTTGACCAAAGGAAACGGAGTTGCCGTAGACGGTTAGCAGGTCACAATGAGCGACGGAGGAAACCACCACCGGGATCATTATTATCCTCTCGTTATATCCGGCTTTCTTCGTCTATTATCGAAAGCAGCAGAGGTGGAAGCTTTATCATGGATTTCACAGCCTATCCAAGGCTTTCCAGAAGGGATGTGTGGCTAACATCAAGATCATCGGAACATGTACCGGGAAATCAATACACTGGAACAGGATGGTTGCTTCCACATCCATGTCAAAACAACTCAGAGAATCCTCCACCTAACCTTTACAGGCAGGAATTACCAGGGGGAACTGGTGTTCCTAGTGGCCGGATCCTCCGGGAGAATGCTTCACGGGAGTTGTTGACTCAAACTGTGCTCTCTCTCTTCTATCAAATCAACCATGGGGCTTCAGAAATCAGGATTGACTCTTGGGTAAATGACATGATCACTCCGAGCTTGTCATGTCTCACCAGCATGCCTCATGGTGCAGTACGATCTTACTCAATGCTCTTGGGTTCAGGCACCAC



gi|109858260|gb|DW487239.1|DW487239 GH_RMIRS_062_H01_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TGACAGAAGAGAGTGAGCAC
|.||||||||| ||||||
ATTGTCTTCTCCCACTCGCC

EST sequence (targeted fragment marked with yellow):
AGTCGCCCTCTTTCCTCCGCAAGTAAACACAGTCAATCCCAAAATCACTGCTTTTCTTCTTCCTTAATACTATTTTCATACTTCCATCTTATCAAAACCAACCCCCTCCCACCGCTCACCCTCTTCTGTTACAGAGATTCCTTCCGGGCTTCTCTTATTCATAACTCATTTCAAATGGAGAAAGCATCCTCACCAGAGGCCTCTCCCAAGCCTCACCACAAGAAAAGCTTTGTTACTACTTTAATGGAAGCTGCCACTCTCCGCTCTCCTTCTTTTAAGGAAGATACCTACTTCATCTCCCATTTGAAGTCTTCCGAGAAGAAGTCCTTGCAAGAACTCAAGGACAAGCTTACGGCTTCTCTTGGCCCCGACGGCCAATGCACCATGTGGGGCATCCCTCTTCTCTCCGGTGACGAAAAATCCGATGTCATTTTGCTCAAGTTCTTGCGAGCTAGGGACTTCAAGGTCTCCGACTCCTTTCACATGTTGGAGAAATGTCTTGCCTGGAGAAAAGAGTTCAAGGCAGACAGTGTGGCGGAGGAGGAGTTGGGGTTGGAGGAGCTGGAGGGAGTGGTTGCTTATATGCATGGCTATGACAGAGAAGGCCACCCTGTTTGCTACAATGCCTATGGGGCTTTTAGAGACAAGGACATGTGTGAGAGAATGTTTGGGGATGAAGAGAAGCTGAGCAAGTTCCTGAGATGGAGAGTTCAAGTTATGGAGAGAGGAATCAATCTGCTGCATTTCAAGCCTGGTGGGATCAACTCTATTATTCAGGTCACCGATCTCAAAGACATGCCCAAAAGAGACCTCAGGGTCGTTTCTAATCAGATCCTCTCTCTCTTTCAGATAATTACCCTGA



gi|193219166|gb|EY196263.1|EY196263 C05_F5_038 Cotton ovule and fiber 3-5 days post anthesis Gossypium hirsutum cDNA, mRNA seque

TGACAGAAGAGAGTGAGCAC
|||||.||||||||| .||
ACTGTTTTCTCTCACATGTN

EST sequence (targeted fragment marked with yellow):
GATGAAGAATTAGCGATGGATCATAGATCTGTTGAACCAATTCGGCTAGGAAACAAGAAGGTGACAAGTGACAACTCTACTTGGGGTGTTGAAAACTAAATTCGAAGGCAGATTCATGCAANTGTACACTCTCTTTTGTCAGTCTTTATCAACTAGAAAGAATAATACATATGCTGTACATGCTTTGGCATTGCCATTAATGACCATTGATATTTTATGGAACACTTGTATGTTTTATGCCATTACTGTTAGAAAAGGGTTAAGGGGTTTTTGTAAGGAATTAGGCCCTTGTTCTTTGTAACCTCATTGCCTTTTTTTTATCAAATGCAGTCTAGGTATGTGTGTAGAGTCCAATTCAACTATTCTTTCAATCCTTAAAATGTTTTTATAATGTTAATCTTTCACAGGCTCTTTGGTTTCATCGTTGTTTCCTTTCCCTTCATTTGATGCGGCTTTTGATAACTTTTGATGGTATTTGGTGCCATTCTGAGCAGAAAACCAGCTAGGGTAATGAAATCAATATCTTTTTGGACAATGAATTATGTCTCCTGGATTCTTGATCAACCATTCAAGACATGGAGTTTGANGGGTTCGTAAAACAAGCAATGTCTTCAGCAGCTTGCTTTTTATGGGTGATGAAAGNAATTGTAAAAAAATTGCTTAAATTATATGGAGATTGAACTGTAAGTGAAGCTGAAATTTGGNAATTTGAAGACCTTNTTTACATAAGA



gi|78342274|gb|DT562548.1|DT562548 EST1073188 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TGACAGAAGAGAGTGAGCAC
||| ||||||||| ||||||
ACTATCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
GGGCTGTAGGCAGGCAGAGCTCATGGAAATGGGTTCGGGCTCTTTGACAGACTCAGGTGGTTCTTCCTCCAACTCCTCCACTGAGTCACTCAACGGCTTGAAATTTGGTCAAAAAATCTATTTTGAGGATACATCAGCTGCTGGCACCGGTGGTGGTACGACCATGGGGACTCCACTCAAGTCAGGTATCGGGTCTTCAAGCTCATCCGGGTCGGGTAAGAAGGCCAGGGGTGGAGTGGTGCAAGGTGGTCAGCCTCCAAGATGTCAAGTAGAAGGGTGTAAAGTGGATCTGACTGATGCAAAAGCTTACTATTCAAGGCATAAGGTTTGTGGTATGCACTCTAAGGCAGCTAAAGTCATTGTTGCTGGTCTTGAGCAAAGATTTTGCCAGCAATGTAGCAAATTTCATCAGCTTCCTGAATTTGACCAAAGGAAACGGAGTTGCCGTAGACGGTTAGCAGGTCACAATGAGCGACGGAGGAAACCACCACCGGGATCATTATTATCCTCTCGTTATATCCGGCTTTCTTCGTCTATTATCGAAAGCAGCAGAGGTGGAAGCTTTATCATGGATTTCACAGCCTATCCAAGGCTTTCCAGAAGGGATGTGTGGCTAACATCAAGATCATCGGAACATGTACCGGGAAATCAATACACTGGAACAGGATGGTTGCTTCCACATCCATGTCAAAACAACTCAGAGAATCCTCCACCTAACCTTTACAGGCAGGAATTACCAGGGGGAACTGGTGTTCCTAGTGGCCGGATTCCTCCGGGAGAATGCTTCACGGCAGTTGTTGACTCAAACTGTGCTCTCTCTCTTCTATCAAATCACCATGGGGCTTCA