miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TGACAGAAGAGAGTGAGCTC
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|89193819|gb|CI018137.1|CI018137 CI018137 Oryza sativa (japonica cultivar-group) green shoot Oryza sativa Japonica Group cDNA

TGACAGAAGAGAGTGAGCTC
. |||||||||| |||| ||
GATGTCTTCTCTGACTCAAG

EST sequence (targeted fragment marked with yellow):
TATTTCAAGGCAGGTTACTCTCAATTCAATCCCACATTGAATGCAGAACTAAAAACATATCTCAAACATAGAAAGCATATGCTCATGTAGTCATGAAATAAGAGTTATGTCACCCTAAATTAGAATTTCTGTTCCCCAAAGTCAGTTATTATAGAAGCATGTTCAGATCTACAGAAAATGCCAAAGCTTATTAGTGACGCTGAGGATCTCCCATTGACAAACATTCAGATCAACTGCTGGTGGAGTTGCAGACGAAGAAAGGTCATTCAGACAACTTTCTATGTACTATCAGACAACTTCAATAACAAGGATGATGTTAGCGAAGCACATTCTTTGGGGTACTAACCCACACTTCTGCACAAAATTGTGCGTGCACCTCGTAAGCCTTATGCCTCCAATCCCAGCGAAGCCCGCATCCACCTTCCACCCACCCAATCGCAGTGAAGCCTTAACTGTTCATGCCCGAACTCAGTCTCTTCTGTAGAAGACCTGAAGTATACCATGTACCTGTCACCACTGTTAACCTTGGATATCACACCAACCCACCATCCATCATTCCAACAAGCATCAACTTCATCAAGTAAATTGAATCCACTGGT



gi|44666275|gb|CR279709.1|CR279709 CR279709 Oryza sativa library (Han B) Oryza sativa cDNA clone y844d08p5, mRNA sequence

TGACAGAAGAGAGTGAGCTC
.|||||||||||| ||||
GCTGTCTTCTCTCTCTCGTA

EST sequence (targeted fragment marked with yellow):
GTCTCTTCGTGTATTCTGCATTGTGTGCAGTTCTCTGTCATTCTGTGTTGTGTAGTATACGCTAGATCTACGAGCATAGCACATCTTAGTGATACATGGTCGCGGTGATCCACTGTATTGTTATCTGCTGCGACTGGATCCTGCGTGTTTCGCTCATACGTTCGTCGTCGTAATCATGTCCATGAGCGTGCTCGTAGCTGCTCTGTCACGTCGATACGCGACATCGGTGTGAGAGTATCCTCCATGCCACATGTTGTCTCTTCCGACTAGCTTGCACCAGATGCGCGTACTTCTAGAGCTTGCGTTCGGATCGATCACTACTGCTCTGGGTGCTACTAGTACGACTTGCTGCGATGCTCTCTCTCTTCTGTCGTGTGCGTCGGTGATAGATCTGTTCATTGCCGGGATGCGCCAGTCTAGCTGAGCTGTCGCGTACGTTGGCATGTGACAGTTCGTCGTGAATGCTGCCGTAGTCGACACTCGTGTCCGTCTGACATCAGATCTAGCTAGAGCGCAGCTGAGAACACTCTCGATGCTGTTCTGGTGTGAGTCACTGTTCATAGCTATGCAGATAAGTTTCACTGTCTGAGTCATCGCTCTCGCTATCTCTGCGTCTATGTCTCTGTTATATTGCATTGTAATTTCTGTGCTGTATGTTCGATGTTAGTTCCGTGTCGGATAGATGGTCGATCCTTGAGGAGCGTCTAGTGTCTGCTGTCATCGCTCTCAGCTGCTGGATGTTGCTGATGTGTCGTCAGAGTTGGCTACGTTGATTCACTCTTCGTCAGCTAGGGTTGTGGTCTTGCATATTATGTTGTTGTAGGTCGTCGTAGGTGAGCTGCTATATGA



gi|218487971|gb|FG949440.1|FG949440 MA_93-11_06335 Mature embryo cDNA Library of 93-11 Oryza sativa Indica Group cDNA 5', mRNA s

TGACAGAAGAGAGTGAGCTC
|||||||||||||. | ||
TCTGTCTTCTCTCATACCAG

EST sequence (targeted fragment marked with yellow):
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCCAAAAAATGGCCGTGACTCTAACCCTAAGTATTTGGGTGTTAAAAAGTTTGGCGGAGAGAAAGTGGAGCCAGGAAACATCATCATCCGCCAAAGAGGAACCCGCTTCCATCCTGGGAACTACGTTGGCATGGGGAAGGACCATACTCTCTTCTGTCTGAAAGAAGGACATGAGGCGATTCGAGCGCAACAAGCTGACTGGCAGGAAATGGGTTCATGTTGATCCTGTTGCTGGGCATGTGCTCCACCCTGTCTACGCCAGTGATTCCACCCCTGCAGCTGAAATGGAGCCATTGTAATGGCTTTACATGGAATGAAGTAACATATGTTGCTAACAGCTTTCGTCCTTGCCTTGAGAGTGACTTCTCTAAAGAAACTTATTGCGATTAAGAGGCTTCTGGGTTGAATTTGCTTGCAATAAGGAACCTAACCATCATGTTCAGAACCCTTTTATTTTTGGTTCTTGCTGTGGCTTAAAGTTGATTTTTTTAAGTATCCTTTGTGATTTGTGGCATGAAGGTTGACAAACCTACATGATTTATAAACACAA



gi|88828402|gb|CI073272.1|CI073272 CI073272 Oryza sativa (japonica cultivar-group) NAA treated callus Oryza sativa Japonica Grou

TGACAGAAGAGAGTGAGCTC
| ||||||||||. ||| ||
AGTGTCTTCTCTTTCTCTAG

EST sequence (targeted fragment marked with yellow):
GACAGCAAATCTGAAAGTTCTATCAGGCTTAACATTTGTGATTGTCTCATGAAATGTTTGATACGAAGAAACAAAGTACATCACTGATGTGCGTACGGCGTACCATCTAGTGCCAGAATGCTAGGACCACAGCAATACTGAAAAGTATCAACAAAGCAACATTCCCACCAGGCAAAATATCTTCACATGAACCAGACGATCTCTTTCTCTTCTGTGACCGGTGAATCCAGGCCATGACAGGAGGGAGGATCCCAAAAAGGAAGCAGTTTGCATAAACCCCAGCAAAATCCAGTGCCTTGGAGAAGGCCGCTGAGAAGAACGACGCAATAACGATAGGAATAATCAGCACAATCCATGTGAGAATAGCCCCATTTCTTCCATGGCCACCGCTAGATTCAGAGAGCTGCCCAATTCCTCGCTTCGGAGAAAACCTCTGCCCAATCAACTCCACTGTATCAGCCAGCTGCTTCGGAAAGCTCACCGCGTATCCTATCAAGCTCGTCGCCCATGCGGCAAACGCAAAGCCTCGAACGGCAGGCAATGCTGCTGGATTCACCGAGAGCAGCAG



gi|58592317|gb|CF990625.1|CF990625 24549rsicee_8193.y1 Oryza sativa cv. LYP9 tillering whole plant cDNA library Oryza sativa Ind

TGACAGAAGAGAGTGAGCTC
|| ||||||||| ||||||
CCTCTCTTCTCTCTCTCGAG

EST sequence (targeted fragment marked with yellow):
GCACGAGCTCTCTCTCTTCTCTCCTCCTCCTCCCACTGAGATCCCTCTCCCCTCCCCGCCATAGGCAGTGGCTTCCCCACCGCCGCCGCCGCCGCCGTCGGAGGAAGAGGCGAGACACTAGAAAAGACGGTTCTTGACCGAGTTTGCGGCCGATCCGGGCTTGGATTTGCCGCGGGAAAGGAAGGAGTTTCGGGGGCTGATAGAGTGAAAGGCGACGGGGGAGAAGATGGCCTCGGAAATGGTTAAGGCGGCGACGAGTGAGAAGCTCAAGGAGATGGATTGGGCCA



gi|117220250|gb|CT852565.1|CT852565 CT852565 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TGACAGAAGAGAGTGAGCTC
|||||||||||||. | ||
TCTGTCTTCTCTCATACCAG

EST sequence (targeted fragment marked with yellow):
CGGGCCGTCCATTCCTCCGCTCGGTCGGGCGCCCCGTTAAGCCTGAGCCCCACCCACCCCCCACCCCCGAACCCTCGCCCTCCTCCTCACCCCTCGCACCCCCTCCACCTCGCCGCCGCCGCCGACTCGCCGGGGCTCGCCGCCACCGGTGGTGGGGGGGAGCTCGACCTCCTCGCCCCACGCGCGCGTCCGGACGCCGTCGTTCTGGGCGCGGGAGAGATCCGTCCGTCGCCCCCCGCTGGGCTTGCGCCATCCTCTCGCCGGGTGATTTGAGACAATCAAGATGGCTTTTTCATCAGTTTTCAGGAGAGGAAATGTCAAAGAATTGATCTCAAATGTTTCGGTCTACACTAGCGCAACAGAGTCATCTGGAGGATTGAGCTTGATTTTTAAGCGTTGGGCCACCAAAAAGACAGCTGGATCAACAAAAAATGGCCGTGACTCTAACCCTAAGTATTTGGGTGTTAAAAAGTTTGGCGGAGAGAAAGTGGAGCCAGGAAACATCATCATCCGCCAAAGAGGAACCCGCTTCCATCCTGGGAACTACGTTGGCATGGGGAAGGACCATACTCTCTTCTGTCTGAAAGAAGGACATGTGCGATTCGAGCGCAACAAGCTGACTGGCAGGAAATGGGTTCATGTTGATCCTGTTGCTGGGCATGTGCTCCACCCTGTCTACGCCAGTGATTCCACCCCTGCAGCTGAAATGGAGCCATTGTAATGGCTTTACATGGAATGAAGTAACATATGTTGCTAACAGCTTTCGTCCTTGCCTTGAGAGTGACTTCTCTAAAGAAACTTATTGCGATTAAGAGGCTTCTGGGTTGAATTTGCTTGCAATAAGGAACCTAACCATCATGTTCAGAACCCAAAAGAAAAAAAAGTTTATTTTTGGTTCTTGCTGTGGCTTAAAGTTGATTTTTTTAAGTATCCTTTGTGATTTGTGGCATGAAGGTTGACAAACCTACATGATTTATAAACACACATAAATTCTAAAAATGTTGCT



gi|88337573|gb|CI630870.1|CI630870 CI630870 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TGACAGAAGAGAGTGAGCTC
||||||||||||||||||||
ACTGTCTTCTCTCACTCGAG

EST sequence (targeted fragment marked with yellow):
GGTGCATGCTGCAGGGAGAGCTCACTCTCTTCTGTCAACTGCCACCACCCAAAACCAAGAAAACAGAAAATCATTAGGTAGACAGANATACCCACATAGGAGCGAGAGAGCCACCTAGCTGCCGGCTGACCGGCCGGCGGCGGAGATGTGCCGCCGGAGTGGGACAAGAAAGGTGGGCGCTACCTAGCTCAGATCTGTGTGCTCTGATTGATTGGTGGTGTGTGACCATAGCCTGCTGGATGCAGCATTATATATAGAGGGGGGAACACACCATGGTTCATAAATCCTTACCCCATATCTCTCTTTCCCTGCTTNTCTCATGATATGCCATATACGGCTGCTGTTCTAGCTTATGGTTTGGCCGGCCGGCGCTGGCGTATTCCGGAAAGGATTAAATATCATGCTAT



gi|88289885|gb|CI525217.1|CI525217 CI525217 Oryza sativa (japonica cultivar-group) after pollination embryo Oryza sativa Japonic

TGACAGAAGAGAGTGAGCTC
|||||||||||| || . ||
ACTGTCTTCTCTAACGTTAG

EST sequence (targeted fragment marked with yellow):
GATCAAATAAATATGCCCTATTGCATTTCAATATTTCATATAAGCTGTTTTTTTTTCGAATCATTCGTACAGAGATGTTAACTCTAATCCATTCGTAACAGGTGAGGACATTGCTATTGGTGAGATTGCAATCTCTTCTGTCATTTGTATGGGCCCTTACCAATAGATGGGATAAGAAATCTACACACAGAGACCGTCAACTATCTGCCGTTCCTTTGGTACGTTAGTCTTACCTAGACTACATGCTNAATTGGCCAGAATCAAGGGGNCAGGCCCATCTTCAAAAGCCATGGTGAATACTAGCTGACAATCTCCATTATGAGCACAATCAGGTACCCCACCTTGCCCCAATTGTCTCATCTACCTCCCACCTTGCGCAACTGCTTTGCCTCTGACCCAACGGTCC



gi|88836329|gb|CI078226.1|CI078226 CI078226 Oryza sativa (japonica cultivar-group) NAA treated callus Oryza sativa Japonica Grou

TGACAGAAGAGAGTGAGCTC
||||.|||||||||| ||
CCTGTTTTCTCTCACTGGAC

EST sequence (targeted fragment marked with yellow):
TTTTCATCTGCAACTTCCAGTCAATTAGGCAAACAGATCTGTCAAACACTGCGTTCACCAGTTTCATACATGATACCATGATACATCAGGCAATGCACAACCGGTAACAAAAACAGATATGTACACTGTTGTGAATGTGTAGTCATTTAAATAATGTGCACCATCCTGGCCTATGTGAAACTCCACATGGAACACCACGAACATACTATCCTCGCAGGAATGGATAAAATGGTGCGCTTCTACATGACCTGTGTAACTGAGAAGGTACAAAAGAGAAGATCAAATCACCACCAAAAAGAAGAAGAAAGCTCAGGAACCTTGGAGCATTCTTGCTCCTGCAGGTCACTCTCTTTTGTCCTCCTCAGCCTCGTCTTCCAAGCTGAAAGCACTACTGACACCACCACTTCTGTCCTTGTCAACCTTTACCATCCCTACATCACCGTCGGTCCCCTTCGTCAGAGATTGAGATTCTTCATCATCGT



gi|29666375|gb|CB662650.1|CB662650 OSJNEd06O02.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd06O02 3', mRNA sequence

TGACAGAAGAGAGTGAGCTC
|||||.|||||| ..|.|.|
ACTGTTTTCTCTAGTTTGGG

EST sequence (targeted fragment marked with yellow):
GGGGTTTGATCTCTTTTGTCAGCACAGGCTCTGATTTTACCTCCTAGACATTCAAAATAGGAACTCTCTTCAATTCCAGTTCCAGATACTGTTCCTCAAGAACACAGGTCCAAATTCCACTTAAGGTTGTGACTCTCTGTGCAAGTAGAGATGTGATTTGTCAAATTTGGAACGGCACTAGTTAATGTCAAACTTCGATTCCCTGTTGTATTGAATTAATTCATGGAACCTACAAATCTTCCACCTGAAGATTTTTTGCCTGCCTGGAATTCTGGAAAGCATTAGCTGCTCAGTCTCTGAAAGTTTAAGATGTGGAGTTCACCAAAGAGTCTTTAATTAATCGATTATCCTTAGGGATAATTGGTTCTAATTCCGTTTACATTGGAAGCCATAGTTCCTTCAGAAGTACCTGTCACAATGGCAGCCCAATGAAAAGAGGAAAACAAAGCATCCTGCTGGCAAAACGACTTGTGGCTGAAGAACAATGATGAAGCAAGGGGTGACGCAGAAGTATTTATTTTACTTTTGGCCGGGTTATAACTTATAAGTCCCTTGATCACTGCAGGTTATAAGCTCTGGGAATCCTCATTGCCCTAGGTTTAGTGTTGAATCTATGTAGTTTTTTATGTAGTTTTTTCAACCAAAATCGATCTTGAAGTTTGCTGTTTATGTGTAATTACGATTTGTATCACCAAGATTAGAATGTTTAGCTATATGCCTTGGATTGATTAACTATGGCTCGTTTTTTATGTCATTCAAGTGTTCAATGAAATGTATGGTTTCACCAAAAAG



gi|117220961|gb|CT845473.1|CT845473 CT845473 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TGACAGAAGAGAGTGAGCTC
||||||||||||..||. |
ACTGTCTTCTCTTGCTTCTG

EST sequence (targeted fragment marked with yellow):
GCATGTGCGCAGTTCTCGACTGGATGGACCCGTGCCATTTTTGTTTCTTGGAGAGGCATAGGCATAGATTGATTTTGCCTCGCACTGTCTAGTAGCATGGTCATATTTAGCATTCTATCCTAATGTTTTTTTTTGTTTCTACTACTGTACTACTACATAATATGTAATGGGTCATTTCTTGCATTTTGTTAGTCAAACTACACAGTAAAATCCTCAAAATCCAAATCTTGTATTTCTTGTAGTAAGTTGTAACCAAATCCAAAAACCCTAGCCACCAGATCCTGTCATCGCGGGCGAGCCATTACTATTTACTAGTCGTCTTCAAGTTGAAGCAGTTTTTTTCCATCGTTTGTCTTCGTTCTCTTCTGTCAAAGCAGCAGCAATTGCCTTCAGTTTGCCTCGTCCATCCGTCGTCCCCCACCGCGTCTTGTCGTCTCGTCAATCGGCACCGTCCTCGTCGTCGTCGCCGCGTTTCCCTTCGCCAGTTGCAGCCGCCACCGGCAGCGCTCATCTTCACCATCGCCGGCGGCAACCCCGTCCGCCCATCGTCCCGCGGGCGTCCTTGCACCAAGGCCGTTGCCGCTTCCATCTGTCGATTCCTGCCGCTGCGGCTTTAGCTAATGCCCACATTCTAAGCTGCTGCTATGTGCAGACCTGCTGCTGAGGGCTCATCTATTTGGGATCATTTCAGTGGCTGGCATTGTGTCCAACCCAGCAGCTCCTGTTACTACCATTCTTATCTCTGCTTCTCCTGGCTCTGTTTTCCTTCTGTTGTCTCATGAGGATTTTGTGACACTTTAGTTGTGCACTATGTACTAATAATATTACAGGTTGTGCTTGATAGTGTAAGGAAGATATTGTTTTAGAAAATTTACAATCTTGTTATGTTTTTCTGCTGATATTGATATTAGTATTGATTCCATAGCAAATTCGTGTCGTTTTCCATTCTTAGGCAAATTTAAGACCAGTCTTTTCTGCATAGAGTATGTTCGTCAGCTATCTTTGTAGTCCTTGCATTGCTAGAAGTTCCAGAACATCTGGACATGTGAATAGTAGATTTCCAACATTAGGCACACATTTGTGCT



gi|88763143|gb|CI772699.1|CI772699 CI772699 Oryza sativa (japonica cultivar-group) 2 weeks seedlings root of seedling UVB irradi

TGACAGAAGAGAGTGAGCTC
||||| ||||||..|||||
ACTGTGTTCTCTTGCTCGAT

EST sequence (targeted fragment marked with yellow):
TTAATTAGCTCGTTCTCTTGTGTCAAGAAAAAAAAAGAAAGAAAAAGCTCGCCGCCGCCGCCACCGTCGCCGGCGCGATGATCACCGGACGCGACATCTACGACGTGCTGGCGGCGATCGTGCCGCTGTACGTGGCGATGTTCCTGGCGTACGGGTCGGTGCGGTGGTGGGGGATATTCACGCCGGACCAGTGCTCCGGCATCAACCGCTTCGTCGCCGTCTTCGCCGTGCCGCTCCTCTCCTTCCACTTCATCTCCACCAACGACCCCTACTCCATGAACTACCGCTTCCTCGCCGCCGACTCGCTCCAGAAGCTCGTCATCCTCGCCGCGCTCGCCGTCTGGCACAAC



gi|29661661|gb|CB657936.1|CB657936 OSJNEc13J24.f OSJNEc Oryza sativa Japonica Group cDNA clone OSJNEc13J24 5', mRNA sequence

TGACAGAAGAGAGTGAGCTC
||||||||||| || |||.
ACTGTCTTCTCCCAGTCGGC

EST sequence (targeted fragment marked with yellow):
GCATCTCACCTCACCTCACCTCCCGATAAGGCACGAGGAGACTATCTCCTCCCCCTCCTCCTCCTCTCCCCGCCGACGACCCCGCCGAGCTACATCTCCGCCGTGCTGATCGCGTGGAGCCGAGGAGAGGAGCGGCGGCCAACGCTACGAGGAGAGGAGAGTGGGGGAGGGGAGGGGAGCGAGCCTTATCTTACCCGCTCCGCCGAAGCCTATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGAATCGTCGCAGGCTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGCGGGGGACATACGTCAAACGACAGCAGCAACACAACAAATATTTCGGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACATCAGACACAGAGGAAACATCAAAACCACCTATTTCCATTCCAGATGATGCATCTGTGATAAAAGAGACACCTGCTCAGCCATGGGATTCAAGTATTGACT



gi|66925114|gb|CX111962.1|CX111962 EI073G04 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

TGACAGAAGAGAGTGAGCTC
|| |||||||| .|| ||||
ACCGTCTTCTCCTACACGAG

EST sequence (targeted fragment marked with yellow):
TGATAGCTGCAGGTACTGGTCGGAATTTCGGGTCGACCACGCGNTCGCCCACGCGTTCGGGAGCATACACTGGGCATTAGCTCGAAGCTCGGGACTCGCCGCGACGACGCGATCGATCGGACATCGGAGTGAGCGAGTAGGTGACTAGGTGTTCGATCACCGTGCCTGGTGGCTGTGGTCGATCTAACTAGCTAGCTAGCTCGATCGATCGCCGGAATTAATGGCAGCCATGGCGTCGCCGACCTCGCCGTCGTCGTTCCTCCCGGCGCACCTCCTGCGGCCCCATGCCGCGTCGCTCGCCGGCGCAAACGTGTTGGTGAGGGACGCTCCGCCTGAGACAGGCGGGGGCCCGCACCACAACGCCGTCCTCCGACAGCCGCCGGTGATGTTGGCAGCGGCGGCGGGCACTCCGGAGCAAGGCAGTGGCCCACACTACAACGCGGTCACGCAGTGGAAGCCCAGTGGAGGAGATCAACTCCGACTGACCGCGTAGCCGCCGGTGATCTTGGCGGCGGCGAGCACTCCGGAGCAAGGCAACGGACCCAAGCACAACGCCGTCCTCAGGCGGCCCAAGCCGCCCGGTGGCGCCGGACCTAGAGAAGGCAGCGGCCGACCCGGCCGAGTGATCCACAGCCGTCGCCGACTCCGACGCCCACAAGGCACAGCACCGCCGACGCAGGCGCCGGCGGCCATGTGGAGCGTACATGAGCACATCCTCTTCTGCCACTACAGAATAACAGCTACTCCACTCCCAACACAACATCACACGTAATACACCCACCACACCCACGACCGCACCCCCCCCACACTCACATAGTACAACCCCACATAAAAAACGATACAAACAAAACACCCCACACCACACAACAACACAACACCATACTACACCAAAGTATATCACAAGACAAAACAACACAACAAAA



gi|218480418|gb|FG951145.1|FG951145 MA_93-11_08040 Mature embryo cDNA Library of 93-11 Oryza sativa Indica Group cDNA 5', mRNA s

TGACAGAAGAGAGTGAGCTC
||||||||||| || ||||
ACTGTCTTCTCCCAGTCGAC

EST sequence (targeted fragment marked with yellow):
CTGCAGGAATTCGAATTCGACGTCGTCTCCCTCGGCGCACTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGCCTTGCCCTATATGCTCTGATAAGATTGCAAAAGATATGCTTAATCCTATCACTGTGACAACATGGGTACTTGTTCAAGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCACGCAGTCAAGCCCTATCTTTGCTGAGTCGAAATCTACGTGCAAGCCCATTTGCACGTGCTTCTGGGAAGTGGGGGACATAGGTCAAACCACCAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACCTCAGACACAGAGGAAAAATCAAAACCACCATATTTCCATTCCAGATGATGCATCTGTGGTAAAAGAGACACCTGCTCAGCCATGGGATTCA



gi|58679939|gb|CK068626.1|CK068626 76198rsicem_23766.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G

TGACAGAAGAGAGTGAGCTC
|.||||||||||...|| .|
ATTGTCTTCTCTTGTTCAGG

EST sequence (targeted fragment marked with yellow):
GCACGAGGCCCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGAACGGAAGAATATATCATTACAGTCATCGAAATTGTTTCCTGAAGTCAATCTGTTGATCATCTTTACAAAAAGGGCCAAAGTGGCATATCATGTGAACTCCACACGGCTTCTATGGGGAAAAAAACATATGCTTTACAAGTTGAAAAGTATACACATTTTGATTTATATGGCAAATATCTGAGTCTCAGAGACATATCAGTCAGGTGTTCTTCTCTAGAACAGATAATGCCGGTGTAAGATAGTTGTTAGCTTTATCTGGTAAATGGGCCACAAGTTCATATAGCTCATTCCCTTGCTCAGCTACATACTCGTAGCATACATCAAAACTTTTGTTCCTAGCAGTGGAATCATGCAATGCTTTGACACAAATATCTGCTACATCGGCGCAACTGATACCCTGCGAGATTCTGTTCCCTTGATCAAAGATCAATGCACGCTGACCACCAGGTTCTTCCTGCAGTGGACCAGGGCGTACTATTGTGTATCCAAGGCCTGACCTTCTCAATGCATCCTCTCCAGCCTTTTTTGCTTTGAGGACTTGTTCTCTTCTGTTAGGTTCAATCCCAGAACCTGAGCATGAGACCAGAATGA



gi|117252138|gb|CT844319.1|CT844319 CT844319 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TGACAGAAGAGAGTGAGCTC
||||||||||||| |||| |
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
AATCTGTTGGGCGGTCTAATTCTAAATTATTCTCTCCAAATTGCAGGATCATATATATGAATACCTGATATTCTGATGATGCATATGATTTGTGATGATTTTCAGGTGTGGATCCAGCCTGTGCCGTCGTGTCCTCCAACTCGAATGGAGCCCCGGATCTTCGGCGTGCTCTCTCTCTTCTGTCAAGCGATTCCTGGGGCCCGGCCGACGTTCAGGCCGGCTCCCAGGTGCATCCCGGTGGAGTGATGCCGCCCCTCGCCGTTGCCGCCGCCACCGTCACCGCCCCGACGAACCCTGTCAGTGTGATGCATGCTCTGCACCCGTCCACCGGAGGAGGAGGATTCTGGCAAGACGGCGACGACCCGCCTCCGCTCGATCATGCCTCGCAGGCTCAGGCGTTCATGCATCCCGGCAATGGCAGCAGCTCCGGCTATGGCCATCTGCACTGATTCTGCTGCATCTATTTGGAACGGGTTGATGACTGGTTACTCCGTTCATGATCTTACCCTGTCAGTGATGGACTCTGAATAATTTGGGGGCGAATTGTCCTGCAACCCCAGGATTTATTATTTCTATTTTTGAAACCAAACCACCAGGATATTTGCCATTGGATGAGAAGTGTTCATGATCATGAAATGATCTGTTTTGTTCCACAGAATCTGACATATCTACTACTCGTCTGGGGAATGAGCTAAAAAAAAAAAAAAAAAAAAGGCCAGCTTGGCCTCGAGGGGGGGCCCGGTAC



gi|88480220|gb|CI417491.1|CI417491 CI417491 Oryza sativa (japonica cultivar-group) callus 100ppm ZnSO4 for 1week Oryza sativa Ja

TGACAGAAGAGAGTGAGCTC
..|||||||||| |||| ||
GTTGTCTTCTCTGACTCAAG

EST sequence (targeted fragment marked with yellow):
GGTCATGAAATAAGAGTTATGTCACCCTAAATTACAATTTCTGTTCCCCAAAGTCAGTTATTATAGAAGCATGTTCAGATCTACAGAAAATGCCACAGCTTATTAGTGACGCTGAGGATCTCCNATTGACAAACATTCAGATCACCTGGTGGTGGAGTTGCACACGAAGAAAGGTCATTCAGACAACTTTCTATGTACTATCAGACAACTTCAATAACAAGGATGATGTTAGCGAAGCACATTCTTTTGGGTACTAACCCACACTTCTGCACAAAATTGTGGGTGCACCTCGTAAGCCTTATGCCTCCAATCCCAGCGAAGCCCGCATNCACCTTCCACCCACCCAATCGCAGTGAACCCTTACNTGTTCATGCCCGAACTCAGTCTCTTCTGTTGAAGACCT



gi|88384019|gb|CI631909.1|CI631909 CI631909 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TGACAGAAGAGAGTGAG-CTC
||||||||||||||||| |||
ACTGTCTTCTCTCACTCCGAG

EST sequence (targeted fragment marked with yellow):
GGTGCATGCCTGCGGGAGAGCCTCACTCTCTTCTGTCACCTGCCACCACCCAAAACCAAGAAAACAGAAAACCATTACGTACACAGACATAGCCACATAGGAGCGAGAGAGCCACTAGCTGCCGGCTGACCGGCCGGCGGCGGAGATGTGCCGCCGGAGTGGGAGAACAAAGGTGGGCGCCAGCTAGCCTCAGATCTGTGTGCTTCGATTGATTGGTGGTGTGTGACCATAGCCCTGGTGGATGCAGCATTATATATAGAGGGGGGAAGAGACCATGGCTTCATAAATCCTTACCCCATATCTCTCTTTTCCTGCTTTTCTCATGATATGCCATATACGGCTGCTGTTCTAGCTTAGGGTTTGGCCGGCCGCCGCTGCCGTATTCCGGAAAGGATACAATATCA



gi|38483072|gb|CF966874.1|CF966874 8652rsiced_12305.y1 Oryza sativa cv. LYP9 trefoil whole plant cDNA library Oryza sativa Indic

TGACAGAAGAGAGTGAGCTC
| |||||||| ||||||.|
CCCGTCTTCTCGCACTCGGG

EST sequence (targeted fragment marked with yellow):
CAACGGGCTCACGCTCTTCTGCCCCGTGGACGCCGCCGTCGACGCCTTCCTGCCCAAGTACAAGAACCTGAGCGGGCAAGGGGAAGGCGGCATCCTCCTCTACCACGCCGTGCCGGACTACTACTCGCTCCAGCTGCTCAAGTCCAACAGCGGCAAGGTCAGCACGCTCGCCACCGCCAGCGTCGCCAAGAAGGACTACAGCTACGACGTCTCCAACGACCGCGACAGCGTCCTGCTCGACACCAAGGTCAACTCGGCCTCCGTCACCGCCACCGTCAAGGACGCCGACCCGCTCGCCGTCTACGCCATCTCCAAGTTCCTGCAGCCCAAGGAGCTCTTCAAGGTCACCGAGGACCTGGCACCGGCGCCCGCGCCGGAGGGCCCCAAGAAGAAGACCAAGAAGAAGAAGCCGTCCACCACCTCCGCCGCTGCCGCCCCCTCCGACGACTCCTCCGCCGCCGACTCGCCCGACGGCACCCCCGCGGACGACGTCGCGGACAAGGCCGCCGCCGCGCCGTCCGTGCTCGCCAGGTGGGTTACCGCCGCCGCCACGGTCGCCGCGGCGTTGGCGTTGGCAGCTTGAGGT



gi|58596841|gb|CK007369.1|CK007369 31219sicef_2436.z1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica Gr

TGACAGAAGAGAGTGAGCTC
||||||||||||| ||||
ACTGTCTTCTCTCCCTCGTA

EST sequence (targeted fragment marked with yellow):
GCACGAGGCGCACTCCAAGGAGCCCGTCGTCCTCGTCGCTGGCCTCCGTCAGCGCTTCTGCCAGCAATGCAGCCGGTTCCATGAGCTGACGGAGTTCGACGACGCGAAGAGGAGCTGCCGGCGGCGGCTGGCCGGGCACAACGACGCGGCGCCGGAAGATGCGCGGCGGACACGGCGCACGGCGAGAACTGCCGCCACGCCGACCAGGACGCCGGCCGGATGCCACCAGGGCACCGGGAACCCGCCGTTCCAGATCAGATAAACCTACCTAAGCATGCTCCCTCTCTTCTGTCATGCAGCCATGCTAGTGTGAGTGTGTGTGTACGTGCCACTACTACTACTACATGTCTACATCGATCTATCTACCTATATATATCCACCACCTACGTCCCTTCTTCCTCAAATCAATCAACTCTATCTATCTATCTATTTATCTATCCCTGAATCTATCTCTATCCGGTGTGCT



gi|218505499|gb|FG958278.1|FG958278 MA_PA64s_06089 Mature embryo cDNA Library of PA64s Oryza sativa Indica Group cDNA 5', mRNA s

TGACAGAAGAGAGTGAGCTC
||||||||||| || ||||
ACTGTCTTCTCCCAGTCGAC

EST sequence (targeted fragment marked with yellow):
ATTCGGTCAAACAACAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACATCAGACACAGAGGAAACATCAAAACCACCTATTTCCATTCCAGATGATGCATCTGTGATAAAAGAGACACCTGCTCAGCCATGGGATTCAAGTATTGACTCATCCCTCACAAGGGAAGAAAGGGAACAGAAACGGAAGCAAGCGAGTGTCAGAGCAACATTTGTGCAAGACCTGCTGCTCACTACTTTATTTGGAGATTAATAAATCAAGATGAGCCTAAGTAGTCGATAGATGCATGGGTAAATCCTGGTGCATATTTGCATAGATAAGTGCCCGGTCAAATTGCTGAAGGTAATATCCATGGCAGATAGGCACGCTTCTGCGGCACCAGGCGTCGTTTCCTCCCGTAAGGTGCAGAGTTGATGTGGGCACGGGGGCATCTTAAGTGTTATTGTAGCCGGTCTGTAATCTGTATCTCCAGTTCCATAACAATCCGCGATCAGCATACGATACACGTAGCAGATC



gi|42591875|gb|CK738361.1|CK738361 00210029058.B08_02021900AA.scf IR62266 Oryza sativa Indica Group cDNA clone 00210029058.B08_0

TGACAGAAGAGAGTGAGCTC
||||||||.|||.| || ||
ACTGTCTTTTCTTAGTCTAG

EST sequence (targeted fragment marked with yellow):
GCACGAGGGGCGGCCGNGTAGCGACAGACCAACGCCGAGCAAGCAAGCCCCACGACAGCCAGGACCACGGAGCCGGGGCCGCGGCGCACCGGTCTCCTGAAATCGTTGGGAGTCATCGATCGTCTTCTTCGTCTCCTCCTCCTCTACGCGATCTGATTCTTTTCTGTCACTGCGTGATGGAGGCGCTCGATGACTGCAAGTGGCGCCATATCCCGGCGTGCGGCGACTGGAATATATGGGATGATATGCCCGTCACCCAATACTTCGAGTCAGGGACTTTCTTCTTCACAGCACAAGCAGAGAAAGATGAGGACCTCTTCAAGGTGCCCCCGTTCCCCGCCCACCCCTACAACTACCAGAAGTGCGTGGGTTCGAGTGGAAAGGGGGAGAAAGAAAACCGCGAATGGCGAATTGCCGAATGGCTGTTGCGTGTTGAGGAGAAGGGGAGGGAAGGGAAAGCCGCCAGTTATCCTGAAATGAGCCCGGCCACAAAANTTGGGAAAGCCCCAAAGGACCGGGCATGTGGGAATGAAAGGGACCCC



gi|29681984|gb|CB678259.1|CB678259 OSJNEe15P09.f OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe15P09 5', mRNA sequence

TGACAGAAGAGAGTGAGCTC
||||||||||| || ||||
ACTGTCTTCTCCCAGTCGAC

EST sequence (targeted fragment marked with yellow):
CCTCACCTCACCTCCCGATAAGGCACGAGGAGACTATCTCCTCCCCCTCCTCCTCCTCTCCCCGCCGACGACCCCGCCGAGCTACATCTCCGCCGTGCTGATCGCGTGGAGCCGAGGAGAGGAGCGGCGGCCAACGCTACGAGGAGAGGAGAGTGGGGGAGGGGAGGGGAGCGAGCCTTATCTTACCCGCTCCGCCGAAGCCTATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGCCTTGCCCTATATGTTCTGATAAGATTGCAAAAGATATGCTTAATCATATCACTGTGCAACGTGGGTACTTGTTCAAGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCGGCAACACAACGAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACATCGGACACAGAGGAAACATCAGAACCACCTATTTCCATTCCAGATGATGCATCTGTGATAAAAGAGACACCTGCTCGGCCATGGGATTCAGTATTGA



gi|88729682|gb|CI753192.1|CI753192 CI753192 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TGACAGAAGAGAGTGAGCTC
|.||||||||||||. . ||
ATTGTCTTCTCTCATGTCAG

EST sequence (targeted fragment marked with yellow):
GTGCTATATCATTAATCTAATTGTTAAATGTGGGTTTAAGAGAGTTAATGTACACATCGACGCTGTTCGTCAAGCAATCACGTGGTTAACTGCTTCAAACCCACGGATTGCACAGTGGAAAAGGTATTGTTGTGCATCGGGTGAGCCCCCACGTAAGTTTTTAACCGATGCAGACCATCGGTGGAATGCCACTTATTTTATGTTAAAGGTTGTATTACCTTACAAGGATTTACTTACTGTTTTCCTTCAAACACGTAATGGCCCAAAAAACAGTGACGGCCAGCCAATACTGACTGATCATACCTGGCACATTGTTGAAAGGTTCAATCAATTTCTTGAAACGTTTCATGACTGTACTCTCTTCTGTTATCTCAAGTATATTATCCAACAG



gi|29659405|gb|CB655680.1|CB655680 OSJNEc09F02.f OSJNEc Oryza sativa Japonica Group cDNA clone OSJNEc09F02 5', mRNA sequence

TGACAGAAGAGAGTGAGCTC
||||||||||| || ||||
ACTGTCTTCTCCCAGTCGAC

EST sequence (targeted fragment marked with yellow):
CTCGCCTCCCGATCCCGCACGAGGAGACTATCTCCTCCCCCTCCTCCTCCTCTCCCCGCCGACGACCCCGCCGAGCTACATCTCCGCCGTGCTGATCGCGTGGAGCCGAGGAGAGGAGCGGCGGCCAACGCTACGAGGAGAGGAGAGTGGGGGAGGGGAGGGGAGCGAGCCTTATCTTACCCGCTCCGCCGAAGCCTATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGCCTTGCCCTATATGTTCTGATAAGATTGCAAAAGATATGCTTAATCATATCACTGTGCAACATGGGTACTTGTTCAAGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCCACACAACCAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTT



gi|218504261|gb|FG954775.1|FG954775 MA_PA64s_02586 Mature embryo cDNA Library of PA64s Oryza sativa Indica Group cDNA 5', mRNA s

TGACAGAAGAGAGTGAGCTC
||||||||||| || ||||
ACTGTCTTCTCCCAGTCGAC

EST sequence (targeted fragment marked with yellow):
CCCCATGCGGCGCCTTGCCCTATATGTCTGATAAGATTGCAAAAGATATGCTTAATCATATCACTGTGCAACATGGGTACTTGTTCAAGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCAACACAACAACATATTTCAGCTGACCCTCTTCTGTCATC



gi|86488035|gb|CI130668.1|CI130668 CI130668 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage and Panicles two

TGACAGAAGAGAGTGAGCTC
||||||||.|||||| | |
ACTGTCTTTTCTCACCAGTG

EST sequence (targeted fragment marked with yellow):
ACACAAATGCTGTTTCTGTTGCAGATTGTGGAGGAACTTGTGTACATTGTGCATTACTTGCCTTCTGAGATCAATTGTGTCTTCTACAAGGAACATGAAGAGGATAGATCTGTGAAGGCTAATGGGAGCCCTCAGCAAACTTTAGGGTCTGCTGATCTCCAGCTGAATTACGCAAGGATCGTTATCGCCATACAAGTTTTGGTAAGATTCTTTGACAGTCATTAGGCCATTGTTCTAGGATCTTGGTCATTGATCAAGTGTAGTCGTGCATGATATAAACATATTTCCGGTTTTCAGTTGATTTGGCACACTAACTGAAATGTCGAAACTGATTTTATTTGTTCATAAAGTTTCAATCGCAGGTATCCGTCGCATCATCGGTTCCGCAATGTGCTGTAGATTCATTGTTCCATGCACTGCCTTATAGAATCAGATCAGTTTTGCTACCTAGGATGAGACACGGCGATTTTGACGACCAGGTGACCACTCTTTTCTGTCAATTCCGATTACCTGACAA



gi|3107481|gb|D43221.1|D43221 D43221 Rice callus cDNA (H.Uchimiya) Oryza sativa cDNA clone SS064, mRNA sequence

TGACAGAAGAGAGTGAGCTC
||||||||||| || ||||
ACTGTCTTCTCCCAGTCGAC

EST sequence (targeted fragment marked with yellow):
GAAAAGAACGTTTGAAAGAAAAGGAAAAGGAGAAAGAAAAGATACCAGTTCAATTGAAACCTTACATTGGTACCTCGTCATCACCCCTGAGCAACTCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACATCAGACACAGAGGAAACATCAAAACCACCTATTTCCATTCCAGATGATGCATCTGTGATAAAAGAGACACCTGCTCAGCCATGGGATTCAAGTATTGGCTCATCCCTCACAAGGGGCGGAAAGGGACCAGAAACGGAAGCAAGCGAGTTTTCA



gi|29663684|gb|CB659959.1|CB659959 OSJNEd01F09.f OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd01F09 5', mRNA sequence

TGACAGAAGAGAGTGAGCTC
||||||||||| || ||||
ACTGTCTTCTCCCAGTCGAC

EST sequence (targeted fragment marked with yellow):
CCCGCATCTCACCTCACCTCACCTCCCGATAAGGCACGAGGAGACTATCTCCTCCCCCTCCTCCTCCTCTCCCCGCCGACGACCCCGCCGAGCTACATCTCCGCCGTGCTGATCGCGTGGAGCCGAGGAGAGGAGCGGCGGCCAACGCTACGAGGAGAGGAGAGTGGGGGAGGGGAGGGGAGCGAGCCTTATCTTACCCGCTCCGCCGAAGCCTATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGCCTTGCCCTATATGTTCTGATAAGATTGCAAAAGATATGCTTAATCATATCACTGTGCAACATGGGTACTTGGTCAAGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCCAACAACAGCAGCAACACGGCAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCCACATCAGACACAGAGGAAGCATCAGGACCACCTATTTC



gi|89164558|gb|CI101646.1|CI101646 CI101646 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa

TGACAGAAGAGAGTGAGCTC
||||.|||||||||| ||
CCTGTTTTCTCTCACTGGAC

EST sequence (targeted fragment marked with yellow):
TGTCAAACACTGCGTTCACCAGTTTCATACATGATACCATGATACATCAGGCAATGCACAACCGGTAACAAAAACAGATATGTACACTGTTGTGAATGTGTAGTCATTTAAATAATGTGCACCATCCTGGCCTATGTGAAACTCCACATGGAACACCACGAACATACTATCCTCGCAGGAATGGATAAAATGGTGCGCTTCTACATGACCTGTGTAACTGAGAAGGTACAAAAGAGAAGATCAAATCACCACCAAAAAGAAGAAGAAAGCTCAGGAACCTTGGAGCATTCTTGCTCCAGCAGGTCACTCTCTTTTGTCCTCCTCAGCCTCGTCTTCCAAGCTGAAAGCACTACTGACACCACCACTTCTGTCCTTGTCAACCTTTACCATCCCTACATCACCGTCGGTCCCCTTCGTCAGAGATTGAGATTCTTCATCATCGTCGTCGGC



gi|58597996|gb|CK008524.1|CK008524 30322rsicef_9257.y1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica G

TGACAGAAGAGAGTGAGCTC
|||||||||||||. | ||
TCTGTCTTCTCTCATACCAG

EST sequence (targeted fragment marked with yellow):
GCACGAGGCCCGCGCACCCCCTCCACCTCGCCGCCGCCGCCGACTCGCTGGGGCTCGCCGCCACCGGTGGTGGGGGGGGGAGCTCGACCTCCTCGCCCCACGCGCGCGTCCGGACGCCGTCGTTCTGGGCGCGGGAGAGATCCGTCCGTCGCCCCCCGCTGGGCTTGCGCCATCCTCTCGCCGGGTGATTTGTGACAATCAAGATGGCTTTTTGAGTCAGTTTTCAGGAGAGGAAATGTCAAAGAATTGATCTCAAATGTTTCGGTCTACACTAGCGCAGCAGAGTCATCTGGAGGATTGAGCTTGATTTTTAAGCGTTGGGCCACCAAAAAGACAGCTGGATCAACAAAAAATGGCCGTGACTCTAACCCTAAGTATTTGGGTGTTAAAAAGTTTGGCGGAGAGAAAGTGGAGCCAGGAAACATCATCATCCGCCAAAGAGGAACCCGCTTCCATCCTGGGAACTACGTTGGCATGGGGAAGGACCATACTCTCTTCTGTCTGAAAGAAG



gi|117249207|gb|CT855214.1|CT855214 CT855214 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TGACAGAAGAGAGTGAGCTC
||||| ||||||..|||||
ACTGTGTTCTCTTGCTCGAT

EST sequence (targeted fragment marked with yellow):
ACTTAATTAGCTCGTTCTCTTGTGTCAAGAAAAAAAAAGAAAGAAAAAGCTCGCCGCCGCCGCCACCGTCGCCGGCGCGATGATCACCGGACGCGACATCTACGACGTGCTGGCGGCGATCGTGCCGCTGTACGTGGCGATGTTCCTGGCGTACGGGTCGGTGCGGTGGTGGGGGATATTCACGCCGGACCAGTGCTCCGGCATCAACCGCTTCGTCGCCGTCTTCGCCGTGCCGCTCCTCTCCTTCCACTTCATCTCCACCAACGACCCCTACTCCATGAACTACCGCTTCCTCGCCGCCGACTCGCTCCAGAAGCTCGTCATCCTCGCCGCGCTCGCCGTCTGGCACAACCTGCTCTCCCGCTACCGCCGCAATGGCGGCGCCGCCGCGTCGCTCGACTGGACCATCACCCTCTTCTCGCTGTCCACGCTGCCCAACACGCTGGTAATGGGCATCCCGCTGCTCCGCGCCATGTACGGCGACTTCTCCGGCTCGCTCATGGTGCAGATCGTCGTGCTCCAGAGCGTCATCTGGTACACCCTCATGCTCTTCCTCTTCGAGTACCGCGGCGCCAAGGCGCTCATCTCCGAGCAGTTCCCGCCGGACGTCGGCGCCAGCATCGCCTCGTTCCGCGTCGACTCCGACGTCGTCTCGCTCAACGGGAGGGAGGCGCTGCAGGCGGACGCCGAGGTGGGGCGCGACGGCCGCGTCCACGTCGTCATCCGCCGCTCCGCCTCGGCCTCCACCACCGGCGGCGGCGGGGGCGCCGGGCGCTCCGGCGTGTCCCGGGCGTCCGGGGCGTCCAACGCCATGACGCCGCGCGCCTTCAACCTTACCGGGGTGGGAAAATTACTTTGTTGAAAAAGTTCGGGCAAGCCCCCCCCCGTGGGCGGTTCCAGTTTTAACCCGGGCCCGCTTTTTCCCCCTTGGTTCTTCCGCAGGAAAGTATGGCCCGGCCAATTGGGTTTGCCTCATTGGGGCCAAAACGGGCGGGGGCCGGGGGGCGGGCCCCCAAGGCCCTTATTGAAGGAAGGTTAACAAAAAAATTTCGCTCTTCCAGAAAGGGCGCGCGACCCCCGCCCTGGGGTTTTCCCCCCCCCCCAAACCCCCCGGTTTTATATCCTCGGGGGCACAAGGAAAAAAAAGGCAGCTCGGCGGGGGGCTTAAAAAACTCTAACACTCTACCATAAAAGAGAAGAAATTTTAAAAACTTTGCTTGTATGAGTGTGGGGGAGGTCTTCTTTTTGCGGGCGCCGTGTGTTCCGGGCGTGTTGGTGGGGGTGGGTGGGGCGACCATCAATCTTTTCTCCCTGATTTACAAGATTCCTGGCGTGTTTCTACACCATCCATAACTCTACATATCACGT



gi|40489749|gb|BX899619.1|BX899619 BX899619 Oryza sativa library (Han B) Oryza sativa cDNA clone y775b04p5, mRNA sequence

TGACAGAAGAGAGTGAGCTC
||||.||||| || |||||
TCTGTTTTCTCGCAGTCGAG

EST sequence (targeted fragment marked with yellow):
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGAGAGACAGAGTAGTAGAGAGAGAGAGGAGGCAAAGCAGCAGCAGCAGCCGCAGCCAATACGATCCGCTCCTCCTCGCTCGCTCCTCGTCGACCTAGAGATCCCCCCGCGCCGGCGCCGCCGATTTGATTCGCCCACCCCTAGGCCCCAGCTAGCTAGATCTGGTGCGGATCCCTCGCCGTCGCCGCCATGTTCTGGCGCATGACTGGTCTCTCCGCGGCCTCGCCGGTGGATACAATTCTAGACAAGGAGAACTTCACATTAGAAGAACTTCTTGACGAGGATGAAATAATTCAGGAGTGCAAAGCGCTGAATACTCGTCTCATAAATTTCTTGCGAGACAAGGCTCAAGTGGAGCAATTGCTTCGTTACATCGTGGAAGAAGTACCAGAAGATTCTGAAAAGAAACGTTCTTTTAAGTTCCCATTCATTGCTTGTGAGATATTTACCTGTGAAATTGACATCATCTTGAGGACCTTAGTAGAGGATGAAGAGCTAATGGATATGCTTTTCTCATTTGTAAGACCTGGTCATCCACATAGCACATAGTTAGCTGGATACTTCAGTAAGGTGGTAATATGTACGATGCTGAGAAAGACTTCCCTCCTATGAACTTTTCCGGAAGCACCAGAAATTGTGGCCACTGGTGGACCCTCGGACACCTCATAGGGGTCGATCTGATGTTGCGAGTACCATCCTTGAGTTAGATGGCGTAATACTGCAGGCTGCTGGTAATGATGAAGCCGAGGAGCTTTAGAGGCAACGTGCCGCTCAATGTGGTAGAGCTGACGCTCTTTTGTCTCTGCTGGCACCACCCGGTCCACGCGTATGTACATCGACATAAGGCAACGATATTACAAGTACGACGCGTGGCACAA



gi|117243768|gb|CT843223.1|CT843223 CT843223 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TGACAGAAGAGAGTGAGCTC
| |||||||| ||||||.|
CCCGTCTTCTCGCACTCGGG

EST sequence (targeted fragment marked with yellow):
TCGTCGTCGTCTGGGGGCTTGATGTTCTGTGTGTCAAGGCCTGATTGATAACTGCTGCTATCCCATGATCTGCCAGTGTGGAGTTATCCTGTTGCCGTGTGCGTGTGTCTTCGAGACATTTGCTTGTGGTGATCTGATGTTTGGGGCTTAATGGGCTTACAACCCTCGTTGTTGTAACCTGTGTGCCCTGTTTTATGTGAGACCGCTTCGTCACTTATAATATGCGCGTTTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAGCTGAGCTGCGGCGCCCCACCACCATACCTCTCCGACTCCGCGCGAGCATCGCCACCAGCCCACCACCGCACCAGTAGTAGTGAGTGCTCAGTGCGTTCCACTCCACTCCGAGCTAAGCAGCGAACAGCTCGCCGCCGACGCTCTCTCTCTCTCTCTGTAGATATGGAGCTGCTGCTGCGGCGGCTGGCGGTGGTGGTGGCGGTGGTGGCGTTGACGGCGGCGACGGCGGCGGAGGGGTACAACATCACCAAGATCCTCGGGGACCACCCGGAGTACTCGCAGTTCAACAAGCTGCTGACAGAGACGCGGCTGGCCGGCGACATCAACCGCCGCCGCACCATCACGGTGCTGGTGGTGGCCAACGGCGACATGGGCGCGCTCTCCGGCGGCCACTACACCCTCCCCACGCTCCGCCACATCCTCGAGATGCACATCCTCGTCGACTACTACGGCGCCAAGAAGCTCCACCAGCTCGCCCGCGGCGACACCGCCTCCTCCTCCATGTTCCAGGAGTCCGGGTCGGCCCCCGGCACGACGGGGTACGTGAACATCACGCAGCACCGCGGCGGGCGCGTGTCGTTCACGGCGGAGGACGCGGCGGACAGCGCGACGCCGTCGAGCTTCGTCAAGTCCGTGAAGGAGATCCCCTACGACCTCGCCGTGCTCCAGATCAGCAAGCCGCTGTCCTCCCCTGAGGCGGAGGCGCCCGTGGCCCCGCCGGCGCCGGTGAACCTCACCGAGCTCCTGTCCAAGAAGTACTGCAAGAACTTCGCCGGCCTCCTCGCCTCGAACGCCGACGTGTACAGCAACATCAACGCGACCAAGGACAACGGGCTCACGCTCTTCTGCCCCGTGGACGCCGCCGTCGACGCCTTCCTGCCCAAGTACAAGAACCTGACGGCCAAGGGGAAGGCGGCCATCCTCCTCTACCACGCCGTGCCGGACTACTACTCGCTCCAGCTGCTCAAGTCCAACAGCGGCAAGGTCAGCACGCTCGCCACCGCCAGCGTCGCCAAGAAGGACTACAGCTACGACGTCTCCAACGACCGCGACAGCGTCCTGCTCGACACCAAGGTCAACTCGGCCTCCGTCACCGCCACCGTCAAGGACGCCGACCCGCTCGCCGTCTACGCCATCTCCAAGTTCCTGCAGCCCAAGGAGCTCTTCAAGGTCACCGAGGACCTGGCACCGGCGCCCGCGCCGGAGGGCCCCAAGAAGAAGACCAAGAAGAAGAAGCCGTCCACCACCTCCGCCGCTGCCGCCCCCTCCGACGACTCCTCCGCCGCCGACTCGCCCGACGGCACCCCCGCGGACGACGTCGCGGACAAGGCCGCCGCCGCGCCGTCCGTGCTCGCCAGGTGGGTTACCGCCGCCGCCACGGTCGCCGCGGCGTTGGCGTTGGCAGCTTGAGGTGGTGGTTTGAGCTTAGTGCATTTTGTGTTGAGTTCTTCAGCTCCTCTCCCTCTTCTTCTTTTGTCCAATTCGTGTCCCTCGTTGGTGCAAAAAATAAGAAGGGCTATTTATTTTTATATCTATATATTTATCGCTGCAGTTCCCAGGGAAAAAATTGAAACAAAAAAGAAGAAACTTAATTAGAGGTGTGATTCTAGAGTTTTTCATTTTCTTTTGTTTATTGGGTTTGTGGTGATCATTTTGTAATGATAGTGGTCAATGAGATTGGACAGTGTGTTTATATATGATTAAAGACATCATCAAGTTTAGAGTTGTACCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACAAAAACACAAAAAAAGAGGGAAAAAAAAAAAAAAAAAAGGGGCACCTTGGGCCTCAAGGGGGGGG



gi|44671936|gb|CR285370.1|CR285370 CR285370 Oryza sativa library (Han B) Oryza sativa cDNA clone p648f11p3, mRNA sequence

TGACAGAAGAGAGTGAGCTC
||||||||||||| |||| |
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTGAGCAAAATACTTTTGATTCAACAGAAAGAGATCCAATCTATGATGTTTGGCAGTACCAAATTCAGGACATGAAAAGCAAAAGGGAGAAATTTTATAGTCTCAACAACATGAACTGTAGCCAAATAACAGATAGGCTGCCAACATGGTGGCCAAAGGAACGGAGATATTGTCATCCACAACATCATTGACAGGAATACACTCCACTACAGTAGCTGCTAATGCAACAAGAGCCAGTTTACCAAGTGCCAGATCCCAGCAGACAGTGAAGTAACCAAGGCAAGAGAAGTAGAACAGCATCAGTGCAGATAGAAGGAAGCCAGAAATGAACATTGAGATGCTTCCTATCCAGCTCTTGTTCTCATTGAATGGCAGCTTCGCGGAGCCATACCTTCTCCCAACAATGTCAGCAAAGCCACCACCACCACCAAGTGCTCGACTCCGATTGTGCTCTCTCTCTTCTGTCATCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCAATGGCCAAGATACTTCATTTTTGCGCCCCA



gi|86866046|gb|CI336793.1|CI336793 CI336793 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

TGACAGAAGAGAGTGAGCTC
||||.|||||||||| ||
CCTGTTTTCTCTCACTGGAC

EST sequence (targeted fragment marked with yellow):
AGGATTAAAAACTTTGGCTATTTTTAATCTGCAACTTCCAGTCAATTAGGCAAACAGATCTGTCAAACACTGCGTTCACCAGTTTCATACATGATACCATGATACATCAGGCAATGCACAACCGGTAACAAAAACAGATATGTACACTGTTGTGAATGTGTAGTCATTTAAATAATGTGCACCATCCTGCCCTATGTGAAACTCCACATGGAACACCACGAACATACTATCCTCGCAGGAATGGATAAAATGGTGCGCTTCTACATGACCTGTGTAATTGAGAAGGTACAAAAGAGAAGATCAAATCACCACCAAAAAGAAGAAGAAAGCTCAGGAACCTTGGAGCATTCTTGCTCCAGCCAGGTCACTCTCTTTTGTCCTCCTCAGCCTCGTCTTCCAAGCTGAAAGCACTACTGACACCACCACTTCTGTCCTTGTCAACCTTTACCATCCCTACATCACGTCGGC



gi|58689083|gb|CK077770.1|CK077770 81635rsicen_8670.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indic

TGACAGAAGAGAGTGAGCTC
||||||||||| || ||||
ACTGTCTTCTCCCAGTCGAC

EST sequence (targeted fragment marked with yellow):
ACTAGTGGATCCCCGGGCTGCAGGCTCACTCACCTCCCGATAAGGCACGAGGAGACTATCTCCTCCCCCTCCTCCTCCTCTCCCCGCCGACGACCCCGCCGAGCTCCATCTCCGCCGTGCTGATCGCGTGGAGCCGAGGAGAGGAACGGCGGCCAACGCTACGAGGAGAGGAGAGTGGGGGAGGGGAGGGGAGCGAGCCTTATCTTACCCGCTCCGCCGAAGCCTATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGCCTTGCCCTATATGCTCTGATAAGATTGCAAAAGATATGCTTAATCATATCACTGTGCAACATGGGTACTTGTTCAAGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCG



gi|86598629|gb|CI355246.1|CI355246 CI355246 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone

TGACAGAAGAGAGTGAGCTC
.||||||||||| |||| ||
GCTGTCTTCTCTGACTCAAG

EST sequence (targeted fragment marked with yellow):
CATGAAATAAGAGTTATGTCACCCTAAATTAGAATTTCTGTTCCCCAAAGTCAGTTATTATAGAAGCATGTTCAGATCTACAGAACTGCCAAAGCTTATTAGTGACGCTGAGGATCTCCCATTGACAAACATTCAGATCAACTGCTGGTGGAGTTGCAGACGAAGAAAGGTCATTCAGACAACTTTCTATGTACTATCAGACAACTTCAATAACAAGGATGATGTTAGCGAAGCACATTCTTTTGGGTACTAACCCACACTTCTGCACAAAATTGTGGGTGCACCTCGTAAGCCTTATGCCTCCACTCCCAGCGAAGCCGCATCCACCTTCCAGCCACCCAATCGCAGTGAAGCCTTAACTGTTCATGCCCGAACTCAGTCTCTTCTGTCGAAGAACTGAAGTCTCCACTGTAGCTGTCACCCTGTTACCCTTGGCC



gi|89195516|gb|CI051629.1|CI051629 CI051629 Oryza sativa (japonica cultivar-group) cold treated callus Oryza sativa Japonica Gro

TGACAGAAGAGAGTGAGCTC
||||.|||||||||| ||
CCTGTTTTCTCTCACTGGAC

EST sequence (targeted fragment marked with yellow):
TTTTTCATCTGCAACTTCCAGTCAATTAGGCAAACAGATCTGTCAAACACTGCGTTCACCAGTTTCATACATGATACCATGATACATCAGGCAATGCACAACCGGTAACAAAAACAGATATGTACACTGTTGTGAATGTGTAGTCATTTAAATAATGTGCACCATCCTGGCCTATGTGAAACTCCACATGGAACACCACGAACATACTATCCTCGCAGGAATGGATAAAATGGTGCGCTTCTACATGACCTGTGTAACTGAGAAGGTACAAAAGAGAAGATCAAATCACCACCAAAAAGACGAAGAAAGCTCAGGAACCTTGGAGCATTCTTGCTCCAGCAGGTCACTCTCTTTTGTCCTCCT



gi|88725363|gb|CI748622.1|CI748622 CI748622 Oryza sativa (japonica cultivar-group) 1 day after pollination pistil Oryza sativa J

TGACAGAAGAGAGTGAGCTC
||||||||.|||.| || ||
ACTGTCTTTTCTTAGTCTAG

EST sequence (targeted fragment marked with yellow):
GATGTGCATGCGGCCGTGTTGCTACTGACCAATGCCTACCTAGCAAGCTCCACTACAGCTTTGACCACTGAGCCGTTGCTGCTGCTCACNTGTCTCCTGAAATCGTTGGGAGTCATCGATCGTCTTCTTCGTCTCCTCCTCCTCTTCGNGATCTGATTCTTTTCTGTCACTGCGTTATGGAGGCGCTCGATGACTGCAAGTGGCGCCAAATCCCGGCGTNCGGCGACTGGAATATATGGGATGATATGCCCGTCACCCAATACTTCGAGTCAGGGAACTTCTTCTTCACAGCACAAGCAGAGAAAGATGAGGACCTCTTCAAGGTGCCCCAGTTCCCTGCCAACCCCTAAAACTA



gi|218498480|gb|FG959841.1|FG959841 MA_PA64s_07652 Mature embryo cDNA Library of PA64s Oryza sativa Indica Group cDNA 5', mRNA s

TGACAGAAGAGAGTGAGCTC
||||||| ||||||| | ||
ACTGTCTACTCTCACACTAG

EST sequence (targeted fragment marked with yellow):
AGGAACACCTCATCATCCACCAGGCAATAGCCATTCACCAGGACCAAGCGCCCAGAACACCATCAGTATGCGTGGCTAGGCACCATGGTTCTCCCAGCCCGGTGCGGGTGGAGGGCGCAGGCGCAGTGGACAGACGTCAGGCTGAGGCAGCCACTGATGATCAGGTAGTGCCTCCCAGGGCACGTGTGGAGGGCCGGGAAGGAGTCGCAGACCGCCTGCACCGCTGGGGGTGTCACGGCCGTGCACTGGCTGATGTTCAGGTTTGCGAGACCGTCTTCTTCCTTAGACCTGCTGCTCCTCACACTGTCCCCCCTCCTGCGTCTGCTCTTGACCCGGCTGTTCGCGAGGGAGTACATGGCTCGGTCGGTGATGTTCTGGCAGTAGTACAAGCCTAAAGATCGCAGGTGTGGACACCCAGTGGCAAGAGCGATCACACTCTCATCTGTCATAAGAACACAAGCACACAAGTCCAGAGCCCTGAGATCAGGACACCCTGATGCCAAGCTGGTCACTCCCTTATCTGTGACATCCTCACACCAACCTAAGTTCAATGATTGCAGCTGGCCGCAATTACGGGCTATGGCCTGCAAAGCTCTGTCGGTTGCTGCCTTCCCACAACCACATAGATTCAAGCACTTAAAATGTTTACAGTGGAAAGTAAGATA



gi|88457212|gb|CI531811.1|CI531811 CI531811 Oryza sativa (japonica cultivar-group) 5 days after pollination pistil Oryza sativa

TGACAGAAGAGAGTGAGCTC
||||.|||||||||| ||
CCTGTTTTCTCTCACTGGAC

EST sequence (targeted fragment marked with yellow):
CTGCAACTTCCAGTCAATTAGGCAAACAGATCTGTCAAACACTGCGTTCACCAGTTTCATACATGATACCATGATACATCAGGCAATGCACAACCGGTAACAAAAACAGATATGTACACTGTTGTGAATGTGTAGTCATTTAAATAATGTGCACCATCCTGGCCTATGTGAAACTCCACATGGAACACCACGAACATACTATCCTCGCAGGAATGGATAAAATGGTGCGCTTCTACATGACCTGTGTAACTGAGAAGGTACAAAAGAGAAGATCAAATCACCACCAAAAAGAAGAAGAAAGCTCAGGAACCTTGGAGCATTCTTGCTCCAGCAGGTCACTCTCTTTTGTCCTCCTCAGCCTCG



gi|87021511|gb|CI274118.1|CI274118 CI274118 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo

TGACAGAAGAGAGTGAGCTC
||||||||.|||||| | |
ACTGTCTTTTCTCACCAGTG

EST sequence (targeted fragment marked with yellow):
TTTTTTTAATGTTTATCACATTTTTCAATAACGAATTTATGTTAAATACACAAATGCTGTTTCTGTTGCAGATTGTGGAGGAACTTGTGTACATTGTGCATTACTTGCCTTCTGAGATCAGTTGTGTCTTCTACAAGGAACATGAAGAGGATAGATCTGTGAAGGCTAATGGGAGCCCTCAGCAAACTTTAGGGTCTGCTGACCTCCAGCTGAATTACGCAAGGATCGTTATCGCCATACAAGTTTTGGTAAGATTCTTTGACAGTCATTAGGCCATTGTTCTAGGATCTTGGTCATTGATCAAGTGTAGTCGTGCATGATATAAACATATTTCCGGTTTTCAGTTGATTTGGCACACTAACTGAAATGTCGAAACTGATTTTATTTGTTCATAAAGTTTCAATCGCAGGTATCCGTCGCATCATCGGTTCCGCAATGTGCTGTAGATTCATTGTTCCATGCACTGCCTTATAGAATCAGATCAGTTTTGCTACCTAGGATGAGACACGGCGATTTTGACGACCAGGTGACCACTCTTTTCTGTCAATTCCGATTACCTGACAAAAATGTGTATCCTGTATATACTGTTCATCTTCATTT



gi|163917925|gb|EG714757.1|EG714757 Os6CPREST0371 6cm rice panicles Oryza sativa Japonica Group cDNA clone 6CPR-C2D06S, mRNA seq

TGACAGAAGAGAGTGAGCTC
||||||||.|||.| || ||
ACTGTCTTTTCTTAGTCTAG

EST sequence (targeted fragment marked with yellow):
ACGGCCGGGGATCTGCATGCGGCCGTGTTGCTACTGACCAATGCCTAGCTAGCAAGCTCCACTACGGCTTTGACCACTGAGCCGTTGCTGCTGCTCACCTGTCTCCTGAAATCGTTGGGAGTCATCGATCGTCTTCTTCGTCTCCTCCTCCTCTTCGCGATCTGATTCTTTTCTGTCACTGCGTTATGGAGGCGCTCGATGACTGCAAGTGGCGCCAAATCCCGGCGTTCGGCGACTGGAATATATGGGATGATATGCCCGTCACCCAATACTTCGAGTCAGGGACTTTCTTCTTCACAGCACAAGCAGAGAAAGATGAGGACCTCTTCAAGGTGCCCCAGTTCCCT



gi|86877512|gb|CI312825.1|CI312825 CI312825 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

TGACAGAAGAGAGTGAGCTC
||||.|||||||||| ||
CCTGTTTTCTCTCACTGGAC

EST sequence (targeted fragment marked with yellow):
CATCTGCAACTTCCAGTCAATTAGGCAAACAGATCTGTCAAACACTGCGTTCACCAGTTTCATACATGATACCATGATACATCAGGCAATGCACAACCGGTAACAAAAACAGATATGTACACTGTTGTGAATGTGTAGTCATTTAAATAATGTGCACCATCCTGGCCTATGTGAAACTCCACATGGAACACCACGAACATACTATCCTCGCAGGAATGGATAAAATGGTGCGCTTCTACATGACCTGTGTAACTGAGAAGGTACAAAAGAGAAGATCAAATCACCACCAAAAAGAAGAAGAAAGCTCAGGAACCTTGGAGCATTCTTGCTCCAGCAGGTCACTCTCTTTTGTCCTCCTCAGCCTCGTCTTC



gi|88348825|gb|CI631912.1|CI631912 CI631912 Oryza sativa (japonica cultivar-group) callus 2ppm ABA(abcisic acid) Oryza sativa Ja

TGACAGAAGAGAGTGAGCTC
||||||||||||||||||||
ACTGTCTTCTCTCACTCGAG

EST sequence (targeted fragment marked with yellow):
AGGTGCATGCTGCAGGCAGAGCTCACTCTCTTCTGTCAACTGCCACCCACCAAAACCAAGAAAACAGAAAACCATTAGGTAGACAGACATAGCCACATAGGAGCGAGAGAGCCACTAGCTGCCGGCTGACCGGCCGGCGGCGGAGATGTGCCGCCGGAGTGGGAGAAGAAAGGTGGGCGCTACCTAGCTCAGATCTGTGTGCTTCGATTGATTGGTGGTGTGTGACCATAGCCCGGTGGATGCAGCATTATATATAGAGGGGGGAAGAGACCATGGTTCATAAATCCTTTACCCCATATCTCTCTTTTCCTGCTTCCCTCATGATATGCCATATACGGCTGCTGTTCTAGCTTAGGGTTTGGCCGGCCGCCGCTGGCGTATCCCGGAAAGGATACAATATC



gi|88508323|gb|CI435829.1|CI435829 CI435829 Oryza sativa (japonica cultivar-group) callus 100ppm ZnSO4 for 1week Oryza sativa Ja

TGACAGAAGAGAGTGAGCTC
. |||||||||| |||| ||
GATGTCTTCTCTGACTCAAG

EST sequence (targeted fragment marked with yellow):
GGTCATGAAATAAGAGTTATGTCACCCTAAATTAGAATTTCTGTTCCCCAAAGTCAGTTATTATAGAAGCATGTTCAGATCTACAGAAAATGCCAAAGCTTATTAGTGACGCTGAGGATCTCCCATTGACAAACATTCAGATCAACTGCTGGTGGAGTTGCAGACGAAGAAAGGTCATTCAGACAACTTTCTATGTACTATCAGACAACTTCAATAACAAGGATGATGTTAGCGAAGCACATTCTTTTGGGTACTAACCCACACTTCTGCACAAAATTGTGCGTGCACCTCGTAAGCCTTATGCCTCCAATCCCAGCGAAGCCCGCATCCACCTTCCACCCACCCAATCGCAGTGAAGCCTTAACTGTTCATGCCCGAACTCAGTCTCTTCTGTAGAAGAACTGAAGTATACCATGTACCTGTCACCACTGTTAACCTTGGATATCANACCAACCCACCATCC



gi|58674377|gb|CK063063.1|CK063063 54169rsicek_2301.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr

TGACAGAAGAGAGTGAGCTC
||||||||||||| |||| |
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
GGCACGAGGTGCTCTCTCTCTTCTGTCAATCGATTCAGTGGGTGCTGCAAACCTTCAGCCAGGTTCTCAGATTCACCCTGGTGTCACCTGCATTGCCGGCACCTCCAACCCTGTCATGATGCCATCTCCAGCAATCTGGCAAGGAGGCTTGTCCCTTGATCAGCAGGCGCAGTTTCAGGCTTTCGACCGCCTTGGCAACGACGACGACGAAGATCATCTCCAGCTCCCAAAGCCTTCCTATGACAACTCCCACTATGATCAGATGAACTGACGATGTTTCAGATGTCGCGCAATCGACATGGCTTCTGCTCTTATCTGAAATTTCTGAAATCTGGAACTTCGTTCTTGGTGTTCTGAAGAATAAAGGTGTGCGAGAAACTTGAATTGATCTGGTTGTGTTGTACTCTGGTTGTAGCGCTGCCATGAAACATAAACTTAACTTTTGCTTTCCTTTATAAA



gi|87027458|gb|CI272223.1|CI272223 CI272223 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo

TGACAGAAGAGAGTGAGCTC
|.||||||||||...|| .|
ATTGTCTTCTCTTGTTCAGG

EST sequence (targeted fragment marked with yellow):
GGAACGGATGAATATATCATACAGCCATCGAAATTGTTTCCTGAAGTCAATCTGTTGATCATCTTTACAAAAAGGGCCAAAGTGGCATATCATGTGAACTCCACACGGCTTCTATGGGGAAAAAAACATATGCTTTACAAGTTGAAAAGTATACACATTTTGATTTTGGCAAATATCTGAGTCTCAGAGACATATCAGTCAGGTGTTCTTCTCTAGAACAGATAATGCCGGTGTAAGATAGTTGTTAGCTTTATCTGGTAAATGGGCCACAAGTTCATATAGCTCATTCCCTTGCTTAGCTACATACTCGTAGCATACATCAAAACTTTTGTTCCTAGCAGTGGAATCATGCAATGCTTTGACACAAATATCTGCTACATCGGCGCAACTGATACCCTGCGAGATTCTGTTCCCTTGATCAAAGATCAATGCACGCTGACCACCAGGTTCTTCCTGCAGTGGACCAGGGCGTACTATTGTGTATCCAAGGCCTGACCTTCTCAATGTATCCTCTCCAGCCTTTTTTGCTTTGAGGACTTGTTCTCTTCTGTTAGGTTCAATCCCAGAACCTGAGCATGACCAGAATGAAGTCTGTTTCTTGACCAGTAGGCAAAGCTTTGATGTATTCCAATATGAGCTCAAAATTTCTGGGGTCAGTAGCACTTTGAGATCCATCACCAGGTCTCTGTCTTTTGGGTTC



gi|88965110|gb|CI097978.1|CI097978 CI097978 Oryza sativa (japonica cultivar-group) Panicles more than 5cm stage Oryza sativa Jap

TGACAGAAGAGAGTGAGCTC
. ||||||||||| |||||
GATGTCTTCTCTCTCTCGAA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTATAAGGAGGAGGTCTTTTAATTGATTGCAAACAATAAACTTGGTCCCCTCAGCAAACAGACCAAAAAACAAAGAACCTGTTTGAAAGGCTTACATCAGACTCCAATAATTTTTGTTTCAGAAGGAAGCAAGCCATTGATGATTAGTACTAAGCTCTCTCTCTTCTGTAGTTATATCTCAGCAATTCAATGCCATGTACGAAGCAAAATGCCAAAGAACAAAACAGAAGTTAGTGGTTGCTGTTTCTACATCGACTTCAACGCGACTAACACCACGATCAGTTCTCCTGATTACAATGGACTGCCATGAACTTTCATTGCAAATAGCTTCGAAATGCCCATGTACAAGTCCAACATTTCTGCCGGTCGTACACTTCAGTTCCTGAAGAAGCTGGGAGACAGACTTCAGTCGTCACAAGAAATTTGGTACTTGTGTAGTACTCTGTATGAACAATGACTTATTAGTATGAGATTTATTAAAGAAGACGAAAACTTC



gi|88457321|gb|CI534319.1|CI534319 CI534319 Oryza sativa (japonica cultivar-group) after pollination embryo Oryza sativa Japonic

TGACAGAAGAGAGTGAGCTC
|||||||||||| || . ||
ACTGTCTTCTCTAACGTTAG

EST sequence (targeted fragment marked with yellow):
GCTGAGATTGCAATCTCTTCTGTCATTTGTATGGGCATTAACAATAGATGGGATAAGAAATTTACACAAGAGACCGTTAACTATCTGCAGTTACTTTGGTACGTTAGTCTTACCTAGACTAGATGCTCAATTGGCCAGAATCAAGGGGCCAGGCCCATCTTCAAAAGCCATGGTGAATACTAGCTGACCATCTCCATTATGAGCACAATCAGGTACTCCAGTTTGCCAGCATTGTTTCATTTACTTCCAATTGCGAATGCTTGCTTGATGAAGGTCATACATTCCATACTTCTCAGGATGATGCTGGGTTTTCAGAAGCTTGTGAGACAGCGCACCCTCTAATATCTGGTGTATACCCTTTTTCCCATCATCCCCTCTTCCATCGTTCC



gi|88280490|gb|CI401688.1|CI401688 CI401688 Oryza sativa (japonica cultivar-group) callus 50ppm CdCl2 Oryza sativa Japonica Grou

TGACAGAAGAGAGTGAGCTC
||||.|||||||||| ||
CCTGTTTTCTCTCACTGGAC

EST sequence (targeted fragment marked with yellow):
CATCTGCAACTTCCAGTCAATTAGGCAAACAGATCTGTCAAACACTGCGTTCACCAGTTTCATACATGATACCATGATACATCAGGCAATGCACAAACGGTAACAAAAACAGATATGTACACTGTTGTGAATGTGTAGTCATTTAAATAATGTGCACCCATCTGGCCTATGTGAAACTCCACATGGAACACCANGAACATACTAATCTCGCAGGAATGGATAAAATGGTGCGCTTCTACATGACCTGTGTAACTGAGAAGGTACAAAAGAGAAGATCAAATCACCACCAAAAAGAAGAAGAAAGCTCAGGAACCTTGGAGCATTCTTGCTCCAGCAGGTCACTCTCTTTTGTCCTCCTCAGCCTCGTCTTCCAAGCTGAAAG



gi|58692041|gb|CK080728.1|CK080728 83224rsicen_28911.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indi

TGACAGAAGAGAGTGAGCTC
. |||||||||| |||| ||
GATGTCTTCTCTGACTCAAG

EST sequence (targeted fragment marked with yellow):
CCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAAATAAGAGTTATGTCACCCTAAATTAGAATTTCTGTTCCCCAAAGTCAGTTATTATAGAAGCATGTTCAGATCTACAGAAAATGCCAAAGCTTATTAGTGACGCTGAGGATCTCCCATTGACAAACATTCAGATCAACTGCTGGTGGAGTTGCAGACGAAGAAAGGTCATTCAGACAACTTTCTATGTACTATCAGACAACTTCAATAACAAGGATGATGTTAGCGAAGCACATTCTTTGGGGTACTAACCCACACTTCTGCACAAAATTGTGCGTGCACCTCGTAAGCCTTATGCCTCCAATCCCAGCGAAGCCCGCATCCACCTTCCACCCACCCAATCGCAGTGAAGTCTTAACTGTTCATGCCCGAACTCAGTCTCTTCTGTAGAAGACCTGAAGTATACCATGTACCTGTCACCACTGTTAACCTTGGATATCACACCAACCCACCATCCATCATTCCAACAAGCATCAACTTCATCAAGTAAATTGAATCCACTGGTTACAGGGATATCTGGAGGACAGGGTCTGACGTGCTGCACTTCTATGGCTTCTGTCAAAGGAGTGATTTCATCATCAGCCTTCAATG



gi|66920023|gb|CX106871.1|CX106871 BI128O10 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

TGACAGAAGAGAGTGAGCTC
||||||||.|||.| || ||
ACTGTCTTTTCTTAGTCTAG

EST sequence (targeted fragment marked with yellow):
CTGCTCTGAGGTCTGGCTGGAATTCCTGGGTTGACCCACGCGTCGCGGACGCGTGGGCTGACCAATGCCTAGCTAGCAATGCTCCACTACAGCTTTGACCACTGAGCCGTTGCTGCTGCTCACCTGTCTCCTGAAATCGTTGGGAGTCATCGATCTGTCTTCTTCGTCTCCTCCTCCTCTTCGCGATCTGATTCTTTTCTGTCACTGCGTTATGGAGGCGCTCGATGACTGCAAGTGGCGCCAAATCCCGGCGTTCGGCGACTGGAATATATGGGATGATATGCCCGTCACCCAATACTTCGAGTCAGGGACTTTCTTCTTCACAGCACAAGCAGAGAAAGATGAGGACCTCTTCAATGTGCCCCAGTTCCCTGCCAACCCCTACAACTACAAGAAGTGCGTTGTTCGAGTGAAAGGGGAGAAAGAAAACGCGAATGCGAATGCGAATGCTGTGCGTGTGAGAAAGGGAGGAAGGAAGCAGCAGTATCTGAATGAGCAGCAGAAGTGGAAGCCAAAGACGGCAGTGGATGAGGACCTGTACAAGATCTCACCAAAGCTAATCTGCAGGGTGAAGAAGAAGAAGTTGCTGAGGAATTTGCTAGGAGGGTGCCTTGGCGTGAACTGCATCGNTTGAAAAACAACTAGNCTCAAATAAATTCCTCCAGGGGTTTGGGGTTTCGAAAGAGATGTTTGTCCCTTGTGTGCTGATATGGACGTAATGGAACTGAGTACTGGTGGACTAAAAAGAACAACAAAAGAACAACACAAAAAACACACAACACAAAACGAAAGCACAAAAGAGCAGACAGACACACTACACGCTCGGAGCGATATAAGCCACAAAAGGAAGACTAAATGATGAAACGGAGCAAAGTACAACTACCACTAACACTACCAGTCTTCTTCTTGCGTTCTCCTCCCTCTACATAANTNNGATCAGCCGACAAAAACCAAACGCAGCGCACACACACCACAATCACCGACGCACGAAACAAACCACAGAGAGCTAACTCAACAGTACTACAAAAGACCACAAGATGCTAGCAATGAACCAAAGCAGAACAAACAACCGACAAACAAAGCAACACCACGT



gi|88278572|gb|CI399572.1|CI399572 CI399572 Oryza sativa (japonica cultivar-group) callus 50ppm CdCl2 Oryza sativa Japonica Grou

TGACAGAAGAGAGTGAGCTC
||||.|||||||||| ||
CCTGTTTTCTCTCACTGGAC

EST sequence (targeted fragment marked with yellow):
CATCTGCAACTTCCAGTCAATTAGGCAAACAGATCTGTCAAACACTGGGTCACCAGTTTCATACATGATACCATGATACATCAGGCAATGCACAACCGGGTAACAAAAACAGATATGTACACTGTTGTGAATGTGTAGTCATTTAAATAATGTGCACCATCCTGGCCTATGTGAAACTCCACATGGAACACCACGAACATACTATCCTCGCAGGAATGGATAAAATGGTGCGCTTCTACATGACCTGTGTAACTGAGAAGGTACAAAAGAGAAGATTAAATNACCACCAAAAAGAAGAAGAAAGCTCAGGAACCTTGGAGCATTCTTGCTCCAGCAGGTCACTCTCTTTTGTCCTCCTCAGCCTCGTCTTCAAAGCTGAAAGCACTACTGAC



gi|58599831|gb|CK010359.1|CK010359 28709rsicef_5939.y1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica G

TGACAGAAGAGAGTGAGCTC
||||||||||||| |||| |
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
GCACGAGGCGATTCTTGATCCAGAAGAGCATCGCAGGTTCAGAAGCTTTACGTTGGATTTCTCCTACCCAAGGGTTCCAAGCAGCGTAAGGAATGCATGGCCAGCAATTCAACCAGGCGATCGGATCTCCGGTGGTATCCAGTGGCACAGGAACGTAGCTCCTCATGGTCACTCTAGTGCAGTGGCGGGATATGGTGCCAACACATACAGCGGCCAAGGTAGCTCTTCTTCAGGGCCACCGGTGTTCGCTGGCCCAAATCTCCCTCCAGGTGGATGTCTCGCAGGGGTCGGTGCCGCCACCGACTCGAGCTGTGCTCTCTCTCTTCTGTCAACCCAGC



gi|58655060|gb|CK043740.1|CK043740 43023rsiceh_10157.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G

TGACAGAAGAGAGTGAGCTC
||||||||||||| |||| |
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
GCACGAGGGAGAGAGAGACATACTACACGCACCACCAAATCCCTCTTGGCATCAGCAGCAGGCAGGCAGCATTTCGTTGGCTCCACCTCTGACGGCGGCCGCCGCTTCCCTTTCCTCCAGGAAGGCGAGATCAGCTTCGGCAACGGCGCCGGCGCCGGCGGCGTGCCAATGGATCAGGCAGCAGCTGCTGCTGCTGCTTCAGTGTGCCAGGCACTTCTGAAGACGGTAGCTCCTCCTCCTCCTCCTCATGGCGGCGGCGGCAGCGGCGGCGGCAAGATGTTCTCCGATGGTGGGTTGACACAAGTGCTCGACTCCGATTGTGCTCTCTCTCTTCTGTCAGCTCCGGCGAACTCCACGGCCATCGACGTCGGCGGTGGCCGGGTGGTCGTCCAGCCGACCGAGCACATCCCCATTGCG



gi|58692740|gb|CK081427.1|CK081427 84747rsicen_25977.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indi

TGACAGAAGAGAGTGAGCTC
|||||||||||||. | ||
TCTGTCTTCTCTCATACCAG

EST sequence (targeted fragment marked with yellow):
TAGTGGATCCCCGGGCTGCAGGCCCCTCCACCTCGCCGCCGCCGCCGACTCGCTGGGGCTCGCCGCCACCGGTGGTGGGGGGTGGATGCTCGATCTCCTCGCCCCACGCGCGCGTCCGGACGCCGTCGTTCTGGGCGTCGGGAGAGATCCGTCCGTCGCCCCCCGCTGGGCTTGCGCCATCCTCTCGCCGGGTGATTTGTGACAATCAAGATGGCTTTTATCATCAGGTTACAGGAGAGGAAATGTCAAAGAATTGATCTCAAATGTTTCGGTCTACACTAGCGCAGCAGAGTCATCTGGAGGATTGAGCTTGATTTTTAAGCCGTTGGGCCACCAAAAAGACAGCTGGATCAACAAAAAATGGCCGTGACTCTAACCCTAAGTATTTGGGTGTTAAAAAGTTTGGCGGAGAGAAAGTGGAGCCAGGAAACATCATCATCCGCCAAAGAGGAACCCGCTTCCATCCTGTGAACTACGTTGGCATGGGGAAGGACCATACTCTCTTCTGTCTGAAAGAAGGACTTGTGCGATTCGAGCGCAACAAGCTGACTGGCAGGAAATGGGTTCATGTTGATCCTGTTGCTGGGCATGTGCTCCAGCCTGTCTACGCCAGTGATTCGAC



gi|29681543|gb|CB677818.1|CB677818 OSJNEe15D04.f OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe15D04 5', mRNA sequence

TGACAGAAGAGAGTGAGCTC
||||||||||| || ||||
ACTGTCTTCTCCCAGTCGAC

EST sequence (targeted fragment marked with yellow):
CCGCATCTCACCCCTCCTCACCTCCCGATAAGGCACGAGGAGACTATCTCCTCCCCCTCCTCCTCCTCTCCCCGCCGACGACCCCGCCGAGCTACATCTCCGCCGTGCTGATCGCGTGGAGCCGAGGAGAGGAGCGGCGGCCAACGCTACGAGGAGAGGAGAGTGGGGGAGGGGAGGGGAGCGAGCCTTATCTTACCCGCTCCGCCGAAGCCTATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGCCTTGCCCTATATGTTCTGATAAGATTGCAAAAGATATGCTTAATCATATCACTGTGCAACATGGGTACTTGTTCAAGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGT



gi|88692802|gb|CI736377.1|CI736377 CI736377 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TGACAGAAGAGAGTGAGCTC
|.||||||||||||. . ||
ATTGTCTTCTCTCATGTCAG

EST sequence (targeted fragment marked with yellow):
GTGCTATATCATTAATCTAATTGTTAAATGTGGGTTTAAGAGAGTTAATGTACACATCGACGCTGTTCGTCAAGCAATCACGTGGTTAACTGCTTCAAACCCACGGATTGCACAGTGGAAAAGGTATTGTTGTGCATCGGGTGAGCCCCCACGTAAGTTTTCAACCGATGCCAGACCATCGGTGGAATGCCACTTATCTTATGTTAAAGGTTGTATCACCTTACAAGGATTTACTTACTGTTTTCCTTCAAACANGTAATGGCCCAAAAAACAGCTGAGGCCAGCCAATACTGACTGATCATACCTGGCACATTGTTGAAAGGTNTAATCAATTTCTTGAAACGTNTCATGACTGTACTCTCTTCTGTTATCTCAAGTAT



gi|88349886|gb|CI634421.1|CI634421 CI634421 Oryza sativa (japonica cultivar-group) leaf of seedling 50ppm CuSO4 for 3 days Oryza

TGACAGAAGAGAGTGAGCTC
||||||||||||| |||| |
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
GGACAGAAACAAACACGAGTACAGAGTTCAGAACAGAACTGAAGATGATAAATTCAGAGCCCCCCCAAAAAGTGTCCCTTTTAATCTGTTGGGCAGTCTAATTCTAAATTATTCTCTCCAAATTGCAGGATCATATATATGAATACCTGATATTCTGATGATGCATATGATTTGTGATGATTTTCAGGTGTGGATCCAGCCTGTGCCGTCGTGTCCTCCAACTCGAATGGAGCCCCGGATCTTCGGCGTGCTCTCTCTCTTCTGTCAAGCGATTCCTGNGGCCCGGCCGANGTTCAGGCCGG



gi|38479620|gb|CF963715.1|CF963715 8914rsiced_12594.y1 Oryza sativa cv. LYP9 trefoil whole plant cDNA library Oryza sativa Indic

TGACAGAAGAGAGTGAGCTC
||||||||||||| ||||
ACTGTCTTCTCTCTCTCGTA

EST sequence (targeted fragment marked with yellow):
GTGGATCCCCCGGGCTGCAGGTGACCGTCCTAAGCAGATGCAAGGCAACAGGCAAGTTTTCTATTGGGTCAAGCTCCTTATGGTCAGATGGGAAGCGGTGCAAGTTCTTGGGATAACCCAGTACCAGGAGGCTTCAAATTTACAGCAACAAAAGCTCCTTGGTCAAGGCCAACAATAGCTGCCGGTGTTGATGGGACGCATGTATCTAATCAGCAGGCATCGGGCAATGTACTGCCACATGGAGCACATCATAGTTTTGATGGTCTCATGGCGTTCAAAGAAACCAACGCGAAGGTCCTTAACCAAGGCATGGAAGCTTCTGCTGTCGCTTCCGGCTCCGCTAGAGGCCCAGACTTTGAGCATGCTCTCTCTCTTCTGTCAATCGATTCAGTGGGTGCTGCAAACCTTCAGCCAGGTTCTCAGATTCACCCTGGTGTCACCGACATTGACGGCACCTCCAACCCTGTCATGATGCCATCTCCAGCAATCTGGCAAGGAGG



gi|66915937|gb|CX102785.1|CX102785 RECm3789 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

TGACAGAAGAGAGTGAGCTC
|||||||||||||. | ||
TCTGTCTTCTCTCATACCAG

EST sequence (targeted fragment marked with yellow):
CCCACGCGTCCGGTCCTTCCCCATGCCAACGTAGTTCCCAGGATGGACCATACTCTCTTCTGTCTGAAAGAAGGACATGTGCGATTCGAGCGCAACAAGCTGACTGGCAGGAAATGGGTTCATGTTGATCCTGTTGCTGGGCATGTGCTCCACCCTGTCTACGCCAGTGATTCCACCCCTGCAGCTGAAATGGAGCCATTGTAATGGCTTTACATGGAATGAAGTAACATATGTTGCTAACAGCTTTCGTCCTTGCCTTGAGAGTGACTTCTCTAAAGAAACTTATTGCGATTAAGAGGCTTCTGGGTTGAATTTGCTTGCAATAAGGAACCTAACCATCATGTTCAGAACCCTTTTATTTTTGGTTCTTGCTGTGGCTTAAAGTTGATTTTTTTAAGTATCCTTTGTGATTTGTGGCATGAAGGTTGACAAACCTACATGATTTATAAACACACATAAATTCTAAAAATGTGCTTGGGCCGGGAAAGTCAAGATGCTTATTTTTCTTCGAAATACCTATGGAATAACCTATGTCACGGGAATTTGAGAGAACTACTTTGTAGGAGGGTTAATCCTTTGGCTTCAAGAGTTTCACATGATTGTTTTTCATATATGATTTAAAATATTCTGCAATACGTAGGATTTTCATTCGAATTGATTCAGTTTCTGCAAAAGTCATCCAGAATTCGTTTGGTTCAAATGAAGTATTTCTTTGTTGCAATACATACTCTTCCCGCCCAATCACCCAATGATCCAAAGGAATATATGTGTGAGCACTTCCTTTATTGAATTATAGTATCGGTTGTTTTAATTCCAACTCTTCACATTTTGGAATCTACCCTGGAAATGGCTATTTTGAAAGTTTTACTACTATTTTATTGTCATGTTATAACATTACATAGAGTTAATTAGTCGGTCACTCCATCATCTTTTTAATAAAGTTTTTTTGAAAGCTAATACTTAATTAACTGTGCATTACTCTATCGCTTTATTCAGTATGTAGTGGAAGTGTCTCTACCTACATGATATAGTCGTCTAAACGCCTAAAAACGGTATCTTATATACCCATTTTTGTTTGATATCTATAGCAAATAATTCACCTATTGGGTGTTGGGGTTCCACAGATTTAAGTGGTTAAACAGGCGAGGAGAATAAGAGGGAAGAACGGGGCCAAGCACAGTGGACATAGCCAAA



gi|58678400|gb|CK067087.1|CK067087 66867rsicem_25821.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G

TGACAGAAGAGAGTGAGCTC
||||||||||||| ||||
ACTGTCTTCTCTCCCTCGTA

EST sequence (targeted fragment marked with yellow):
CACGAGGGAGTTCGACGACGCGAAGAGGAGCTGCCGGCGGCGGCTGGCCGGGCACAACGAGCGGCGCCGGAAGAGCGCGGCGGACACGGCGCACGGCGAGAACTGCCGCCACGCCGACCAGGACGCCGGCCGGAGCCACCAGGGCACCGGGAACCCGCCGTTCCAGATCAGATAAACCTACCTAAGCATGCTCCCTCTCTTCTGTCATGCAGCCATGCTAGTGTGAGTGTGTGTGTTCGTGCCACTACTACTACTACATGTCTACATCGATCTATCTACCTATATATATCCACCACCTACGTCCCTTCTTCCTCAAATCAATCAAATCTATCTATCTATCTATTTATCTATCCCTGAATCTATCTCTATCCGGTGTGCTTTGCTGCTGCTGATTAACTGGCAGTGTGATCATCTCCCTCTACTGCTGCTACATATATGCAGTGCTATGCTGGAGAGGCATAAATGTGCTATATATATGTTCTCTGCCACAACCCTAAGCTAATTGTAACCTGTTGATTAAGCAGGTGTTCTAGGGATTCTCTCTCTCTCTCTCTGTGTGAGGGTGTGTCTGATGTGTAATTGTACTATTGCCTTTGCCCAACAGAAACTTGTAGGCTGCAGTGTGCCTATGTATGCTGTTGTGCCGGGATGGCAGT



gi|29638020|gb|CB643029.1|CB643029 OSJNEb03I05.f OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb03I05 5', mRNA sequence

TGACAGAAGAGAGTGAGCTC
||||||||||| || ||||
ACTGTCTTCTCCCAGTCGAC

EST sequence (targeted fragment marked with yellow):
CCTCACCTCACCTCCCCTTAAAGAGCGAGGAGACTATCTCCTCCCCCTCCTCCTCCTCTCCCCGCCGACGACCCCGCCGAGCTACATCTCCGCAGAGCTGATCGCGTGGAGCCGAGGAGAGGAGCGGCGGGCAACGCTACGAGGAGAGGAGAGTGGGGGAGGGGAGGGGAGCGAGCCTTATCTTACCCGCTCCGCCGAAGCCTATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGATTAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGGTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGCCTTGCCCTATATGTTCTGATAAGATTGCAAAAGATATGCTTAATCATATCACTGTGCAACATGGGTACTTGTTCAAGAATCGTCGCAGGTTGCGCAGATTCGGTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCCAACATCAGACCCAGAGGAAACATCCAAACCACCTATTTCCATTCCAGATGATGCATCTGTGATAAAA



gi|88692187|gb|CI735762.1|CI735762 CI735762 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TGACAGAAGAGAGTGAGCTC
|.|||||||||| |||| ||
ATTGTCTTCTCT-ACTCTAG

EST sequence (targeted fragment marked with yellow):
ATGATAAGTTATCTATATCGTAATAGATTCGTATGTCAAAACTTAGTCGAAATTTTCGATCTCATCTCTTCTGTTAGCCACAGGTGGCTGATTGAAATATTCTTCAATTGAGTCTGAATTTTTATGTTATATGCAAATAATTGTCCCGCTCCAGTTCATATGTCTGATGAAACATGAATGTAAAGGAATTAAGACTTTGGTTATATGATTCGAGTCTGAATTTCCTTATGCTTATGCAAATAATAGTCCAAAAGAATTGGTGATTTTTTTGTGTAGTTCATATGGTTGATAAATATGAATGTGTCTCAAAAGCAACGAAGATTTTGATGACAAGACAATCTGCTATTTGAGTCTGAAATTTCTTATGCTTTTGCAAATAATAGTCATAGTCAGAAC



gi|58686075|gb|CK074762.1|CK074762 69454rsicem_14759.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G

TGACAGAAGAGAGTGAGCTC
||||||||||||| |||| |
ACTGTCTTCTCTCTCTCGTG

EST sequence (targeted fragment marked with yellow):
CACGAGGAGTGATCACCATGCGTTCAGCAGCCATGGTGGCTCAGCGGCTGGGGCACCAATGCTCCACCACCCTGCCTTTGAGCTCACCTCAGGTGGATGTCTCGCGGGAGTCGCCACCGACTCCAGCTGTGCTCTCTCTCTTCTGTCAACTCAGCCATGGGATACTACCCAAAGCACCAGCAGCCACAACCGGTCCCCGCCAATGTCGTCAACGGCCAGCGCCTTCGGAGGCGGCAACAACCCGGTGTCGCCCTCGGTCATGGCAAGCAACTACATGGCGGCGAGCCCCGGCTGGAACAGCTCCAGCCGGGGCCATGACGGCGCCAGGAACGTGCACCTGCCGCCACCGCACGGGGTTGTGCTGAACGAGGTCCCTCCGGGCTCTGTCCACCACGGCCATTTCT